Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

28387653 .. 28394042

Gene Structure 6390 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033520

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAAGCATAAGACCATTATGCTCCGCATTTTGGTTCTCTGCCTGGTCTGCATAACACTACAACTCCAAGTTGAAGCACAATCCCCGCGTCTTGCTGCTGCAGAAAGGGAAGTACTACTAGAAATTGGTGTACAATTAGGAAAAACAGGCTGGGACGTGGATGTTGACCCTTGCAATAATGGCACAACCTGGTCCTCCTTTAGATCCGAGGAGCCCTTATACAACAACACTGTCTTATGCGACTGCTATCCTGATGGTCTATGCCACGTTGTTGGGATTTTTCTTAAGGGACAAGATCTCGCTGGTGTACTTCCATCATCTGTTGCAAAGTTACCCTACCTAACAGCAATTGATTTCACGAGGAACTACCTTAGTGGTAACATACCGAGTCAATGGGCTTCTACGAAGTTGGAATATCTGTCCATTAATGTGAACAAATTATCAGGACCAATTCCTGCCTTCTTGGGAAACATAACGACTCTAAAGTATATTGCAAACAATCTCACAGGAAAGTTGCCAGTGGTTCTCACTAATCTGACTAACTTACACGAACTTAGGATTAGCAGTAACAACTTCACTGGAAAAATTCCAGATTTTTTCAGAAGTTGGAATCAACTTAAGAAATTGTATCTGACTAGCAACTTGCTCAATGGCTCTATTCCAGAATGGATTAAGAGCAAAGATAATCGCTCCGCGATAGATGTTTCTTACAATAATTTTTCAAAGAGCTCTGAGCCACCTACATTTGGTATACTCACACTATGCTATCAGTACTCTTTGCATATCAATTGTGGTGGGAAAGCAATCACCATTGGAGACATCAAATTTGAAGCGGATCAAGACCTAGGAAGTGCATCATATTTCGTTCCTTCAAGGCCTAGCTGGGGATTCAGTAGCACTGGATTTTTCTGGGATAGTAACATCACCTCTAAAGACTACATAGCAAATAATATATCTATACTCGAAATGACCAACTCTGAGTTGTACACAAATGCACGCATCTCTCCTCTTTCTCTTACGTATTATGCACGCTGCTTGGCAAATGGAAGCTATAATGTGAGACTTCACTTTTCGGAGATAATTATCAGAGGCAATGCATCTTTTTACAGTCTTGGAAGACGGATATTTGATGTTTATATTCAGGATAAACATGTATTGAAGGATTTTGAGATTAAAGAGGCAGCAGGAAGGGTTGATAAAGAATTCATAAAAGAATTCCTAGTTGAGGTTAAGGATAAAACTTTAGAAATCCGATTTCATTGGTCTGGGAAAGGGACAACAGCTTCCCCGAGGAGAGGAGTATATGGTCCCCTTATATCAGCTATCTCTGTAGAGTTTGAGTCTGATGTCGCATCTCCTCTTGATAGCAAAAAGAAGGTAATTGTGGTTGCAGCTTCAGCTGGAGGTTCACTTTTGTGTCTTGCTTTCTTAATTTTAGGCATTCTTTGGTGGAAAGGCCGTCTGGATAGCATGATATCAAGGGGAAAAGGTCCAGAGGAAGGTCCAGTAAGATTGGACTGGCCTACAAGGCAGAGAATATGTATAGGCATAGCAAAAGGTCTGGCTTTTTTGCATGAGGAATCAGCACTTAAGGTTGTACATAGGGACATCAAAACAACGAATGCTCTTGTTTTACAACAAAAAGAGAGTTTAGTGGAACTGGTGGATCCAAGGTTAGGATTGCATTTCAGCAAGGAAGAGGCGGTTAGAATGGTCAAAGTTGCTCTGCTATGCATCAATCCGGCAGCTGCACTTAGGCCTAACATGTCTGCAGTCGTGAGTATGCTTGAAGGGCGAGCTCCTGTCGATGAATTGATTATGGATCCAAGTATATATAGTGACGAAATGAGGTTAACAGCATTGAGAAATCCGTTTGAGCAGATTGCAGAAGAGAGTGCAGGTGGAACTAAGAGCTTGATACATTCATCAGATGCATCATGGAATGGTTCTTCTGCTCCTACAACATCTTCAGATCTCTATAAAATCAGTCCTAGTTGTGAGGAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

670

Amino Acids

74.15

Weight (kDa)

7.85

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	259 - 442	1.3e-34	Malectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Tree File

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1889
Acc36I	ACCTGC	1 cut(s)	1889
AccI	GTMKAC	1 cut(s)	751
AccII	CGCG	2 cut(s)	88, 695
AciI	CCGC	5 cut(s)	25, 86, 693, 833, 1703
AclWI	GGATC	6 cut(s)	198, 843, 1661, 1674, 1817, 1830
AcsI	RAATTY	4 cut(s)	585, 824, 1202, 1214
AcuI	CTGAAG	2 cut(s)	1380, 1953
AfaI	GTAC	6 cut(s)	114, 132, 309, 773, 986, 1599
AfiI	CCNNNNNNNGG	7 cut(s)	31, 746, 884, 1225, 1295, 1499, 1676
AflII	CTTAAG	3 cut(s)	284, 617, 1589
AflIII	ACRYGT	2 cut(s)	1150, 1764
AgsI	TTSAA	6 cut(s)	74, 723, 830, 873, 1159, 1790
AjiI	CACGTC	1 cut(s)	157
AjnI	CCWGG	2 cut(s)	42, 188
AleI	CACNNNNGTG	1 cut(s)	1414
Alw21I	GWGCWC	2 cut(s)	731, 1801
Alw26I	GTCTC	2 cut(s)	810, 1054
AlwI	GGATC	6 cut(s)	198, 843, 1661, 1674, 1817, 1830
Ama87I	CYCGRG	1 cut(s)	1288
AoxI	GGCC	4 cut(s)	875, 1456, 1520, 1757
ApeKI	GCWGC	7 cut(s)	95, 98, 1032, 1181, 1391, 1745, 1748
ApoI	RAATTY	4 cut(s)	585, 824, 1202, 1214
ArsI	GACNNNNNNTTYG	2 cut(s)	809, 841
AseI	ATTAAT	1 cut(s)	426
AspA2I	CCTAGG	1 cut(s)	844
AspS9I	GGNCC	5 cut(s)	192, 446, 1307, 1490, 1502
AsuHPI	GGTGA	2 cut(s)	799, 916
AvaI	CYCGRG	1 cut(s)	1288
AvaII	GGWCC	5 cut(s)	192, 446, 1307, 1490, 1502
AvrII	CCTAGG	1 cut(s)	844
BamHI	GGATCC	2 cut(s)	1666, 1822
BanII	GRGCYC	3 cut(s)	216, 731, 1801
BauI	CACGAG	1 cut(s)	358
BbsI	GAAGAC	1 cut(s)	1123
Bbv12I	GWGCWC	2 cut(s)	731, 1801
BbvI	GCAGC	7 cut(s)	82, 85, 1019, 1193, 1403, 1735, 1757
BccI	CCATC	2 cut(s)	248, 322
BceAI	ACGGC	1 cut(s)	1443
BciT130I	CCWGG	2 cut(s)	44, 190
BcoDI	GTCTC	2 cut(s)	810, 1054
BfaI	CTAG	6 cut(s)	119, 636, 845, 879, 1220, 1992
BfmI	CTRYAG	3 cut(s)	99, 1329, 1770
BfrI	CTTAAG	3 cut(s)	284, 617, 1589
BfuAI	ACCTGC	1 cut(s)	1889
BglI	GCCNNNNNGGC	1 cut(s)	1528
BglII	AGATCT	2 cut(s)	295, 1972
BisI	GCNGC	7 cut(s)	96, 99, 1033, 1182, 1392, 1746, 1749
BlnI	CCTAGG	1 cut(s)	844
BlsI	GCNGC	7 cut(s)	97, 100, 1034, 1183, 1393, 1747, 1750
BmcAI	AGTACT	2 cut(s)	114, 773
Bme1390I	CCNGG	2 cut(s)	44, 190
Bme18I	GGWCC	5 cut(s)	192, 446, 1307, 1490, 1502
BmeT110I	CYCGRG	1 cut(s)	1288
BmgBI	CACGTC	1 cut(s)	157
BmgT120I	GGNCC	5 cut(s)	192, 446, 1307, 1490, 1502
BmiI	GGNNCC	4 cut(s)	213, 1309, 1668, 1824
BmrFI	CCNGG	2 cut(s)	44, 190
BmsI	GCATC	7 cut(s)	863, 1008, 1106, 1361, 1743, 1921, 1943
BpiI	GAAGAC	1 cut(s)	1123
BpmI	CTGGAG	1 cut(s)	1422
BsaAI	YACGTR	1 cut(s)	1020
BsaBI	GATNNNNATC	1 cut(s)	1082
BsaJI	CCNNGG	4 cut(s)	207, 844, 1289, 1670
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 746, 884, 1225, 1295, 1499, 1676
Bse1I	ACTGG	6 cut(s)	518, 583, 904, 1505, 1523, 1665
Bse3DI	GCAATG	1 cut(s)	1099
Bse8I	GATNNNNATC	1 cut(s)	1082
BseBI	CCWGG	2 cut(s)	44, 190
BseDI	CCNNGG	4 cut(s)	207, 844, 1289, 1670
BseGI	GGATG	1 cut(s)	166
BseJI	GATNNNNATC	1 cut(s)	1082
BseLI	CCNNNNNNNGG	7 cut(s)	31, 746, 884, 1225, 1295, 1499, 1676
BseMI	GCAATG	1 cut(s)	1099
BseMII	CTCAG	2 cut(s)	723, 969
BseNI	ACTGG	6 cut(s)	518, 583, 904, 1505, 1523, 1665
BseRI	GAGGAG	5 cut(s)	224, 996, 1306, 1311, 1347
BseXI	GCAGC	7 cut(s)	82, 85, 1019, 1193, 1403, 1735, 1757
BseYI	CCCAGC	2 cut(s)	150, 882
BsgI	GTGCAG	2 cut(s)	1734, 1917
Bsh1236I	CGCG	2 cut(s)	88, 695
BshFI	GGCC	4 cut(s)	877, 1458, 1522, 1759
BsiHKAI	GWGCWC	2 cut(s)	731, 1801
BsiHKCI	CYCGRG	1 cut(s)	1288
BsiSI	CCGG	1 cut(s)	1742
BslFI	GGGAC	5 cut(s)	167, 303, 1288, 1293, 1619
BslI	CCNNNNNNNGG	7 cut(s)	31, 746, 884, 1225, 1295, 1499, 1676
BsmAI	GTCTC	2 cut(s)	810, 1054
BsmFI	GGGAC	5 cut(s)	167, 303, 1288, 1293, 1619
BsmI	GAATGC	2 cut(s)	1440, 1627
BsnI	GGCC	4 cut(s)	877, 1458, 1522, 1759
BsoBI	CYCGRG	1 cut(s)	1288
Bsp1286I	GDGCHC	3 cut(s)	216, 731, 1801
Bsp1407I	TGTACA	3 cut(s)	130, 984, 1597
Bsp143I	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
BspACI	CCGC	5 cut(s)	25, 86, 693, 833, 1703
BspANI	GGCC	4 cut(s)	877, 1458, 1522, 1759
BspCNI	CTCAG	2 cut(s)	724, 970
BspFNI	CGCG	2 cut(s)	88, 695
BspLI	GGNNCC	4 cut(s)	213, 1309, 1668, 1824
BspMAI	CTGCAG	2 cut(s)	103, 1774
BspMI	ACCTGC	1 cut(s)	1889
BspPI	GGATC	6 cut(s)	198, 843, 1661, 1674, 1817, 1830
BspTI	CTTAAG	3 cut(s)	284, 617, 1589
BsrDI	GCAATG	1 cut(s)	1099
BsrGI	TGTACA	3 cut(s)	130, 984, 1597
BsrI	ACTGG	6 cut(s)	518, 583, 904, 1505, 1523, 1665
BssECI	CCNNGG	4 cut(s)	207, 844, 1289, 1670
BssMI	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
BssNAI	GTATAC	1 cut(s)	752
BssSI	CACGAG	1 cut(s)	358
BssT1I	CCWWGG	2 cut(s)	844, 1670
Bst1107I	GTATAC	1 cut(s)	752
Bst2BI	CACGAG	1 cut(s)	358
Bst2UI	CCWGG	2 cut(s)	44, 190
Bst4CI	ACNGT	2 cut(s)	232, 1109
Bst6I	CTCTTC	2 cut(s)	1692, 1884
BstAFI	CTTAAG	3 cut(s)	284, 617, 1589
BstAUI	TGTACA	3 cut(s)	130, 984, 1597
BstBAI	YACGTR	1 cut(s)	1020
BstC8I	GCNNGC	3 cut(s)	997, 1030, 1797
BstDEI	CTNAG	6 cut(s)	371, 554, 732, 978, 1754, 1908
BstENI	CCTNNNNNAGG	1 cut(s)	1223
BstF5I	GGATG	1 cut(s)	166
BstFNI	CGCG	2 cut(s)	88, 695
BstKTI	GATC	6 cut(s)	206, 298, 838, 1669, 1825, 1975
BstMAI	GTCTC	2 cut(s)	810, 1054
BstMBI	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 180, 1397, 1528, 1792
BstNI	CCWGG	2 cut(s)	44, 190
BstNSI	RCATGY	2 cut(s)	1154, 1768
BstSCI	CCNGG	2 cut(s)	42, 188
BstSFI	CTRYAG	3 cut(s)	99, 1329, 1770
BstSNI	TACGTA	1 cut(s)	1020
BstUI	CGCG	2 cut(s)	88, 695
BstV1I	GCAGC	7 cut(s)	82, 85, 1019, 1193, 1403, 1735, 1757
BstV2I	GAAGAC	1 cut(s)	1123
BstX2I	RGATCY	5 cut(s)	203, 295, 1666, 1822, 1972
BstXI	CCANNNNNNTGG	1 cut(s)	272
BstYI	RGATCY	5 cut(s)	203, 295, 1666, 1822, 1972
BstZ17I	GTATAC	1 cut(s)	752
BsuRI	GGCC	4 cut(s)	877, 1458, 1522, 1759
BtrI	CACGTC	1 cut(s)	157
BtsCI	GGATG	1 cut(s)	166
BtsIMutI	CAGTG	4 cut(s)	228, 525, 576, 897
BveI	ACCTGC	1 cut(s)	1889
Cac8I	GCNNGC	3 cut(s)	997, 1030, 1797
Cfr13I	GGNCC	5 cut(s)	192, 446, 1307, 1490, 1502
CseI	GACGC	1 cut(s)	77
CsiI	ACCWGGT	1 cut(s)	188
Csp6I	GTAC	6 cut(s)	113, 131, 308, 772, 985, 1598
CspCI	CAANNNNNGTGG	2 cut(s)	775, 810
CviAII	CATG	5 cut(s)	1151, 1471, 1574, 1765, 1938
CviQI	GTAC	6 cut(s)	113, 131, 308, 772, 985, 1598
DdeI	CTNAG	6 cut(s)	371, 554, 732, 978, 1754, 1908
DpnI	GATC	6 cut(s)	205, 297, 837, 1668, 1824, 1974
DpnII	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
Eam1104I	CTCTTC	2 cut(s)	1692, 1884
EarI	CTCTTC	2 cut(s)	1692, 1884
Ecl136II	GAGCTC	2 cut(s)	729, 1799
Eco105I	TACGTA	1 cut(s)	1020
Eco130I	CCWWGG	2 cut(s)	844, 1670
Eco147I	AGGCCT	2 cut(s)	877, 1759
Eco24I	GRGCYC	3 cut(s)	216, 731, 1801
Eco32I	GATATC	1 cut(s)	1476
Eco47I	GGWCC	5 cut(s)	192, 446, 1307, 1490, 1502
Eco53kI	GAGCTC	2 cut(s)	729, 1799
Eco57I	CTGAAG	2 cut(s)	1380, 1953
Eco88I	CYCGRG	1 cut(s)	1288
EcoICRI	GAGCTC	2 cut(s)	729, 1799
EcoNI	CCTNNNNNAGG	1 cut(s)	1223
EcoRI	GAATTC	2 cut(s)	1202, 1214
EcoRII	CCWGG	2 cut(s)	42, 188
EcoRV	GATATC	1 cut(s)	1476
EcoT14I	CCWWGG	2 cut(s)	844, 1670
EcoT22I	ATGCAT	3 cut(s)	1099, 1736, 1936
EcoT38I	GRGCYC	3 cut(s)	216, 731, 1801
ErhI	CCWWGG	2 cut(s)	844, 1670
FaeI	CATG	5 cut(s)	1154, 1474, 1577, 1768, 1941
FaqI	GGGAC	5 cut(s)	167, 303, 1288, 1293, 1619
FatI	CATG	5 cut(s)	1150, 1470, 1573, 1764, 1937
FauI	CCCGC	1 cut(s)	93
FblI	GTMKAC	1 cut(s)	751
Fnu4HI	GCNGC	7 cut(s)	96, 99, 1033, 1182, 1392, 1746, 1749
FokI	GGATG	1 cut(s)	173
FriOI	GRGCYC	3 cut(s)	216, 731, 1801
Fsp4HI	GCNGC	7 cut(s)	96, 99, 1033, 1182, 1392, 1746, 1749
FspBI	CTAG	6 cut(s)	119, 636, 845, 879, 1220, 1992
GluI	GCNGC	7 cut(s)	96, 99, 1033, 1182, 1392, 1746, 1749
GsaI	CCCAGC	2 cut(s)	154, 886
GsuI	CTGGAG	1 cut(s)	1422
HaeIII	GGCC	4 cut(s)	877, 1458, 1522, 1759
HapII	CCGG	1 cut(s)	1742
HgaI	GACGC	1 cut(s)	77
Hin1II	CATG	5 cut(s)	1154, 1474, 1577, 1768, 1941
HincII	GTYRAC	2 cut(s)	166, 1854
HindII	GTYRAC	2 cut(s)	166, 1854
HinfI	GANTC	6 cut(s)	388, 478, 610, 888, 1340, 1580
HpaI	GTTAAC	1 cut(s)	1854
HpaII	CCGG	1 cut(s)	1742
HphI	GGTGA	2 cut(s)	799, 916
Hpy166II	GTNNAC	8 cut(s)	131, 166, 308, 433, 752, 987, 1409, 1854
Hpy8I	GTNNAC	8 cut(s)	131, 166, 308, 433, 752, 987, 1409, 1854
HpyAV	CCTTC	7 cut(s)	469, 879, 1153, 1182, 1369, 1493, 1784
HpyCH4III	ACNGT	2 cut(s)	232, 1109
HpyCH4IV	ACGT	3 cut(s)	156, 267, 1019
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 180, 1397, 1528, 1792
HpyF3I	CTNAG	6 cut(s)	371, 554, 732, 978, 1754, 1908
HpySE526I	ACGT	3 cut(s)	156, 267, 1019
Hsp92II	CATG	5 cut(s)	1154, 1474, 1577, 1768, 1941
KspAI	GTTAAC	1 cut(s)	1854
Kzo9I	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
LmnI	GCTCC	5 cut(s)	27, 211, 695, 1804, 1960
Lsp1109I	GCAGC	7 cut(s)	82, 85, 1019, 1193, 1403, 1735, 1757
LweI	GCATC	7 cut(s)	863, 1008, 1106, 1361, 1743, 1921, 1943
MabI	ACCWGGT	1 cut(s)	188
MaeI	CTAG	6 cut(s)	119, 636, 845, 879, 1220, 1992
MaeII	ACGT	3 cut(s)	156, 267, 1019
MaeIII	GTNAC	5 cut(s)	330, 377, 566, 917, 1838
MalI	GATC	6 cut(s)	205, 297, 837, 1668, 1824, 1974
MboI	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
MboII	GAAGA	5 cut(s)	1128, 1709, 1901, 1941, 1959
MfeI	CAATTG	2 cut(s)	348, 787
MflI	RGATCY	5 cut(s)	203, 295, 1666, 1822, 1972
MhlI	GDGCHC	3 cut(s)	216, 731, 1801
MlyI	GAGTC	3 cut(s)	397, 472, 1349
MmeI	TCCRAC	2 cut(s)	390, 587
Mph1103I	ATGCAT	3 cut(s)	1099, 1736, 1936
MseI	TTAA	9 cut(s)	285, 426, 618, 672, 1173, 1230, 1430, 1590, 1853
MslI	CAYNNNNRTG	2 cut(s)	428, 1414
MspA1I	CMGCKG	2 cut(s)	1400, 1748
MspCI	CTTAAG	3 cut(s)	284, 617, 1589
MspI	CCGG	1 cut(s)	1742
MspR9I	CCNGG	2 cut(s)	44, 190
MunI	CAATTG	2 cut(s)	348, 787
Mva1269I	GAATGC	2 cut(s)	1440, 1627
MvaI	CCWGG	2 cut(s)	44, 190
MvnI	CGCG	2 cut(s)	88, 695
MwoI	GCNNNNNNNGC	5 cut(s)	48, 180, 1397, 1528, 1792
NdeII	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
NlaIII	CATG	5 cut(s)	1154, 1474, 1577, 1768, 1941
NlaIV	GGNNCC	4 cut(s)	213, 1309, 1668, 1824
NmuCI	GTSAC	1 cut(s)	1838
NsiI	ATGCAT	3 cut(s)	1099, 1736, 1936
NspI	RCATGY	2 cut(s)	1154, 1768
OliI	CACNNNNGTG	1 cut(s)	1414
PaqCI	CACCTGC	1 cut(s)	1889
PceI	AGGCCT	2 cut(s)	877, 1759
PciI	ACATGT	2 cut(s)	1150, 1764
PctI	GAATGC	2 cut(s)	1440, 1627
PfeI	GAWTC	3 cut(s)	610, 888, 1580
PkrI	GCNGC	7 cut(s)	97, 100, 1034, 1183, 1393, 1747, 1750
PleI	GAGTC	3 cut(s)	396, 472, 1348
PpsI	GAGTC	3 cut(s)	396, 472, 1348
Ppu21I	YACGTR	1 cut(s)	1020
PscI	ACATGT	2 cut(s)	1150, 1764
PshBI	ATTAAT	1 cut(s)	426
Psp124BI	GAGCTC	2 cut(s)	731, 1801
Psp6I	CCWGG	2 cut(s)	42, 188
PspFI	CCCAGC	2 cut(s)	150, 882
PspGI	CCWGG	2 cut(s)	42, 188
PspN4I	GGNNCC	4 cut(s)	213, 1309, 1668, 1824
PspPI	GGNCC	5 cut(s)	192, 446, 1307, 1490, 1502
PstI	CTGCAG	2 cut(s)	103, 1774
PsuI	RGATCY	5 cut(s)	203, 295, 1666, 1822, 1972
PvuII	CAGCTG	2 cut(s)	1400, 1748
RsaI	GTAC	6 cut(s)	114, 132, 309, 773, 986, 1599
RsaNI	GTAC	6 cut(s)	113, 131, 308, 772, 985, 1598
RseI	CAYNNNNRTG	2 cut(s)	428, 1414
SacI	GAGCTC	2 cut(s)	731, 1801
SaqAI	TTAA	9 cut(s)	285, 426, 618, 672, 1173, 1230, 1430, 1590, 1853
SatI	GCNGC	7 cut(s)	96, 99, 1033, 1182, 1392, 1746, 1749
Sau3AI	GATC	6 cut(s)	203, 295, 835, 1666, 1822, 1972
Sau96I	GGNCC	5 cut(s)	192, 446, 1307, 1490, 1502
ScaI	AGTACT	2 cut(s)	114, 773
SchI	GAGTC	3 cut(s)	397, 472, 1349
ScrFI	CCNGG	2 cut(s)	44, 190
SduI	GDGCHC	3 cut(s)	216, 731, 1801
SexAI	ACCWGGT	1 cut(s)	188
SfaNI	GCATC	7 cut(s)	863, 1008, 1106, 1361, 1743, 1921, 1943
SfcI	CTRYAG	3 cut(s)	99, 1329, 1770
SinI	GGWCC	5 cut(s)	192, 446, 1307, 1490, 1502
SmiMI	CAYNNNNRTG	2 cut(s)	428, 1414
SmlI	CTYRAG	3 cut(s)	284, 617, 1589
SmoI	CTYRAG	3 cut(s)	284, 617, 1589
SnaBI	TACGTA	1 cut(s)	1020
SseBI	AGGCCT	2 cut(s)	877, 1759
SsiI	CCGC	5 cut(s)	25, 86, 693, 833, 1703
SspMI	CTAG	6 cut(s)	119, 636, 845, 879, 1220, 1992
SstI	GAGCTC	2 cut(s)	731, 1801
StuI	AGGCCT	2 cut(s)	877, 1759
StyD4I	CCNGG	2 cut(s)	42, 188
StyI	CCWWGG	2 cut(s)	844, 1670
TaaI	ACNGT	2 cut(s)	232, 1109
TaiI	ACGT	3 cut(s)	159, 270, 1022
TaqI	TCGA	2 cut(s)	963, 1806
TatI	WGTACW	6 cut(s)	112, 130, 307, 771, 984, 1597
TfiI	GAWTC	3 cut(s)	610, 888, 1580
Tru1I	TTAA	9 cut(s)	285, 426, 618, 672, 1173, 1230, 1430, 1590, 1853
Tru9I	TTAA	9 cut(s)	285, 426, 618, 672, 1173, 1230, 1430, 1590, 1853
TscAI	CASTG	4 cut(s)	235, 525, 583, 904
TseFI	GTSAC	1 cut(s)	1838
TseI	GCWGC	7 cut(s)	95, 98, 1032, 1181, 1391, 1745, 1748
Tsp45I	GTSAC	1 cut(s)	1838
TspDTI	ATGAA	5 cut(s)	17, 1195, 1247, 1824, 1914
TspGWI	ACGGA	2 cut(s)	1135, 1860
TspRI	CASTG	4 cut(s)	235, 525, 583, 904
Vha464I	CTTAAG	3 cut(s)	284, 617, 1589
VpaK11BI	GGWCC	5 cut(s)	192, 446, 1307, 1490, 1502
VspI	ATTAAT	1 cut(s)	426
XagI	CCTNNNNNAGG	1 cut(s)	1223
XapI	RAATTY	4 cut(s)	585, 824, 1202, 1214
XceI	RCATGY	2 cut(s)	1154, 1768
XmaJI	CCTAGG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	751
XspI	CTAG	6 cut(s)	119, 636, 845, 879, 1220, 1992
ZrmI	AGTACT	2 cut(s)	114, 773
Zsp2I	ATGCAT	3 cut(s)	1099, 1736, 1936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.