RLG00000033522

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
28442236 .. 28442845
610 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033522

Sequence Viewer

Length: 354 bp
ATGAAATTTCAAGTAGATGAGAACTTTGTAGGCCTTATGGATTGGGCCCTTGTCTTACAACAAAAAGGGAATCTGATGGAGCTGGTGGATCCAAGGCTAGGGTTCGATTTCAGCAAAGAAGAGGCAATTAGAATGGTCAAAGTAGCTCTGCTATGCACCAATCCGGCACCAACACTTAGGCCTATGATGTCTGCAGCAGTGAGTATGCTTGAAGGGCGGAGCGTTGTTCATGAATTGATTATGGATCCAAGTATCTATGGCGATGAGACGAGATTGACAACCTTGAGGGACAGGTTTGAGAAGTTTGCAACAGAAGACTTCATGCGTGCATCAGATGTAACATTGATGGGTTAA

Protein Analysis

118

Amino Acids

13.31

Weight (kDa)

4.82

Isoelectric Point (pI)

25.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 166
AciI CCGC 1 cut(s) 217
AclWI GGATC 4 cut(s) 83, 96, 239, 252
AcsI RAATTY 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 98
AgsI TTSAA 2 cut(s) 11, 212
AluBI AGCT 2 cut(s) 82, 146
AluI AGCT 2 cut(s) 82, 146
Alw26I GTCTC 1 cut(s) 260
AlwI GGATC 4 cut(s) 83, 96, 239, 252
AoxI GGCC 3 cut(s) 31, 45, 179
ApaI GGGCCC 1 cut(s) 49
ApeKI GCWGC 1 cut(s) 194
ApoI RAATTY 1 cut(s) 5
AspS9I GGNCC 2 cut(s) 45, 46
BaeGI GKGCMC 1 cut(s) 49
BamHI GGATCC 2 cut(s) 88, 244
BanI GGYRCC 1 cut(s) 166
BanII GRGCYC 1 cut(s) 49
BbsI GAAGAC 1 cut(s) 321
BbvI GCAGC 1 cut(s) 206
BccI CCATC 2 cut(s) 70, 340
BcoDI GTCTC 1 cut(s) 260
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 1 cut(s) 192
BisI GCNGC 1 cut(s) 195
BlsI GCNGC 1 cut(s) 196
BmgT120I GGNCC 2 cut(s) 45, 46
BmiI GGNNCC 4 cut(s) 47, 90, 168, 246
BmsI GCATC 1 cut(s) 338
BpiI GAAGAC 1 cut(s) 321
BpuEI CTTGAG 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 92
BseLI CCNNNNNNNGG 1 cut(s) 98
BseSI GKGCMC 1 cut(s) 49
BseXI GCAGC 1 cut(s) 206
BshFI GGCC 3 cut(s) 33, 47, 181
BshNI GGYRCC 1 cut(s) 166
BsiSI CCGG 1 cut(s) 164
BslFI GGGAC 1 cut(s) 302
BslI CCNNNNNNNGG 1 cut(s) 98
BsmAI GTCTC 1 cut(s) 260
BsmBI CGTCTC 1 cut(s) 260
BsmFI GGGAC 1 cut(s) 302
BsnI GGCC 3 cut(s) 33, 47, 181
Bsp120I GGGCCC 1 cut(s) 45
Bsp1286I GDGCHC 1 cut(s) 49
Bsp143I GATC 2 cut(s) 88, 244
BspACI CCGC 1 cut(s) 217
BspANI GGCC 3 cut(s) 33, 47, 181
BspHI TCATGA 1 cut(s) 229
BspLI GGNNCC 4 cut(s) 47, 90, 168, 246
BspMAI CTGCAG 1 cut(s) 196
BspPI GGATC 4 cut(s) 83, 96, 239, 252
BspT107I GGYRCC 1 cut(s) 166
BssECI CCNNGG 1 cut(s) 92
BssMI GATC 2 cut(s) 88, 244
BssT1I CCWWGG 1 cut(s) 92
Bst6I CTCTTC 1 cut(s) 114
BstC8I GCNNGC 1 cut(s) 327
BstDEI CTNAG 1 cut(s) 176
BstKTI GATC 2 cut(s) 91, 247
BstMAI GTCTC 1 cut(s) 260
BstMBI GATC 2 cut(s) 88, 244
BstMWI GCNNNNNNNGC 1 cut(s) 214
BstSFI CTRYAG 1 cut(s) 192
BstSLI GKGCMC 1 cut(s) 49
BstV1I GCAGC 1 cut(s) 206
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 2 cut(s) 88, 244
BstYI RGATCY 2 cut(s) 88, 244
BsuRI GGCC 3 cut(s) 33, 47, 181
BtgZI GCGATG 1 cut(s) 276
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 327
CciI TCATGA 1 cut(s) 229
Cfr13I GGNCC 2 cut(s) 45, 46
CviAII CATG 2 cut(s) 230, 322
CviJI RGCY 6 cut(s) 33, 47, 82, 97, 146, 181
CviKI_1 RGCY 6 cut(s) 33, 47, 82, 97, 146, 181
DdeI CTNAG 1 cut(s) 176
DpnI GATC 2 cut(s) 90, 246
DpnII GATC 2 cut(s) 88, 244
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
EciI GGCGGA 1 cut(s) 232
Eco130I CCWWGG 1 cut(s) 92
Eco147I AGGCCT 2 cut(s) 33, 181
Eco24I GRGCYC 1 cut(s) 49
EcoO109I RGGNCCY 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 92
EcoT38I GRGCYC 1 cut(s) 49
ErhI CCWWGG 1 cut(s) 92
Esp3I CGTCTC 1 cut(s) 260
FaeI CATG 2 cut(s) 233, 325
FaiI YATR 8 cut(s) 38, 154, 185, 206, 231, 242, 258, 323
FaqI GGGAC 1 cut(s) 302
FatI CATG 2 cut(s) 229, 321
Fnu4HI GCNGC 1 cut(s) 195
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 1 cut(s) 195
FspBI CTAG 1 cut(s) 98
GluI GCNGC 1 cut(s) 195
HaeIII GGCC 3 cut(s) 33, 47, 181
HapII CCGG 1 cut(s) 164
Hin1II CATG 2 cut(s) 233, 325
HinfI GANTC 1 cut(s) 70
HpaII CCGG 1 cut(s) 164
Hpy188I TCNGA 2 cut(s) 75, 334
Hpy188III TCNNGA 1 cut(s) 230
HpyAV CCTTC 1 cut(s) 206
HpyCH4V TGCA 4 cut(s) 156, 194, 308, 329
HpyF10VI GCNNNNNNNGC 1 cut(s) 214
HpyF3I CTNAG 1 cut(s) 176
Hsp92II CATG 2 cut(s) 233, 325
Kzo9I GATC 2 cut(s) 88, 244
LmnI GCTCC 2 cut(s) 79, 219
LpnPI CCDG 3 cut(s) 68, 177, 277
Lsp1109I GCAGC 1 cut(s) 206
LweI GCATC 1 cut(s) 338
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 1 cut(s) 337
MalI GATC 2 cut(s) 90, 246
MboI GATC 2 cut(s) 88, 244
MboII GAAGA 2 cut(s) 131, 326
MflI RGATCY 2 cut(s) 88, 244
MhlI GDGCHC 1 cut(s) 49
MluCI AATT 3 cut(s) 5, 126, 233
MnlI CCTC 2 cut(s) 115, 279
MseI TTAA 1 cut(s) 352
MspI CCGG 1 cut(s) 164
MwoI GCNNNNNNNGC 1 cut(s) 214
NdeII GATC 2 cut(s) 88, 244
NlaIII CATG 2 cut(s) 233, 325
NlaIV GGNNCC 4 cut(s) 47, 90, 168, 246
PagI TCATGA 1 cut(s) 229
PceI AGGCCT 2 cut(s) 33, 181
PfeI GAWTC 1 cut(s) 70
PkrI GCNGC 1 cut(s) 196
PspN4I GGNNCC 4 cut(s) 47, 90, 168, 246
PspOMI GGGCCC 1 cut(s) 45
PspPI GGNCC 2 cut(s) 45, 46
PstI CTGCAG 1 cut(s) 196
PsuI RGATCY 2 cut(s) 88, 244
SaqAI TTAA 1 cut(s) 352
SatI GCNGC 1 cut(s) 195
Sau3AI GATC 2 cut(s) 88, 244
Sau96I GGNCC 2 cut(s) 45, 46
SduI GDGCHC 1 cut(s) 49
SetI ASST 4 cut(s) 84, 148, 284, 296
SfaNI GCATC 1 cut(s) 338
SfcI CTRYAG 1 cut(s) 192
SmlI CTYRAG 1 cut(s) 283
SmoI CTYRAG 1 cut(s) 283
Sse9I AATT 3 cut(s) 5, 126, 233
SseBI AGGCCT 2 cut(s) 33, 181
SsiI CCGC 1 cut(s) 217
SspMI CTAG 1 cut(s) 98
StuI AGGCCT 2 cut(s) 33, 181
StyI CCWWGG 1 cut(s) 92
TaqI TCGA 1 cut(s) 105
TasI AATT 3 cut(s) 5, 126, 233
TfiI GAWTC 1 cut(s) 70
Tru1I TTAA 1 cut(s) 352
Tru9I TTAA 1 cut(s) 352
TscAI CASTG 1 cut(s) 204
TseI GCWGC 1 cut(s) 194
TspDTI ATGAA 4 cut(s) 17, 218, 246, 310
TspRI CASTG 1 cut(s) 204
XapI RAATTY 1 cut(s) 5
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.