MD00G1006600.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
942392 .. 949654
7263 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1006600.v1.1.491

Sequence Viewer

Length: 2952 bp
ATGGCAAGATTTCTCATCGTGCTCGTACTAATCCTTTGGTTCTGCTTTTCATCAATTGTTAAAGTTGAAGCACAATCTCAATCTGCCCGTCTTGCTCCCAGAGAAGTGGAAGCACTTAAAGAAATACGTACACAACTGGGGAAGAAAGACTGGAACTTCAGCATAGATCCATGCAGCAATAGCACAAATTGGGCTACCCCAAAATCTGCTGATTTCATACAACAACACTCTCATTTGCAACTTTTTCTCAAAGGACAAGATCTTGCTGGTGTACTTCCACCATCCATTGCGAAGTTACCCTACCTAACAAAAGTTGATTTCACAAAGAACTACCTAAGCGGTACTATACCACGTGAATGGGCTTCGACAAAGTTGGAATTTCTGTCCATTACTGTGAACAACTTAACGGGACAGATCCCTGACTACTTGGGAAACATTACCACCCTAATTTATATGAGCCTAGAAAATAACAAGTTTTCTGGATCTGTTCCTCCTGAACTTGGGAAATTGGTTAACTTGAACAATCTCATTCTGAATGCAAACAATCTCACGGGAGAGCTACCGCAGCATCTCACTAATCTGACCAAGTTAACAGAACTTAGGATTAGCATTAACAACTTCACTGGAAAAATACCTGATTTTTTTCAAAGTTGGAAGAACCTTAATATGTTAGAGATCCAAGCTAGTGGCTTCCAAGGTCCAATTCCGCCTAGCATTTCTGTCTTGAGTAGTTTAACAGAACTAAGAATCAGTGACATTAAAAATGACGGGGACTCAGAATTTCCAAACTTGAAGAGCATGCCAAAGATGCTTAATTTAATGCTGAGGAGCTGTAATTTATCTGGACACATCCCCGATTACATACAAAACTTAACAAACTTGAAAACATTAGATCTCAGCTTCAACAGATTGGAAGGTAGTGTTCCTGATATGTCAGCCGCACGCTTGGAGTGGTTATATCTCACAAGCAACTTGCTCACTGGGCCTATTCCAGGCTGGATCAACAAGACGGATATTAAAACCCAGATAGACCTTTCTTACAACAATTTTTCTGAGAACTCTGAGCCAACTACTTGTAGAGAACAATTATTATTTGGAGGGTGCCTAGAAAGTTTTCCATGTCCAAAAGAGCGGTACTCTTTACATATAAACTGTGGAGGAAAGGCAACCACCATTGGAGGAATTGACTTCGAAGCGGATACATATCCAGGTGGGGCAGCAAAGTTCATTCCTGTAAGAGCTTTATGGGGAATAAGTACCACTGGACATTTCTGGGATTCTAAGCCCACCTTTAATGACTACATAGCTAATAATGTGTCCATACAAAGGAACGACTCGGAGTTGTACATGAGTGCGCGTCTATCTCCTCTTTCTCTCACGTATTATGTACGCTGCTTAAGAAATGAAAAGTATACCGTGAAACTTCACTTTTCGGAGATAATAATCAGAGGCAATAAATCGTTTTACAGTCTTGGAAGACGGATATTTGATGTCTATATTCAGGAGGAACTGGTGTGGGAGGATTTTGAGATCGAAAAGGAAGCACATGGGGTTGACAGGGCAATCATTAAGGAACGTAAAGCAGTTCAAGTTAATGATACAACTTTAGAGATCCGATTTCATTGGTCAGGGAAAGGGACAACAACTTCCCCACACAGAGGAGTATACGGTCCTCTTATATCAGCTATCTCGGTAGACCCTGAGTATAAGACTCCTCACGATAGCAAAAGCAAGGTACTAATCACGGTCGGAACTTCAGTTGGAGCTTCGGTTGTGTGCCTTTTCTTGACTTTAGGCATTCTCTGGTGGAGAGGCTGTCTAGAAAGCAAAACATCAAGGGAAAAAGCTTTAAGAGGACTGGATCTGCAAACTGGTTTTTTCACCTTCAGGCAAATTAAAGCTGCTACTAACAACTTTGATCCTGAAAACAAAATTGGGGAAGGTGGTTTTGGGTCTGTCTACAAGGGTATATTGTTGGATGGTACTATAATCGCGGTTAAGCAACTATCATCAAAATCAAAGCAAGGAAACCGGGAATTTGTGAATGAAATAGGCATGGTATCTGCTTTGCATCATCCAAATCTTGTTAGATTGTATGGGTGTTGTATTGAATCAAACCAATTATTGTTGGTATATGAATACATGGAGAATAATAGCCTTGCACATACTTTGTTCGGTCCAGAGGAAGGTCCATTAAAGCTGGACTGGTCTACAAGGCTGAAAATATGCATTGGTATAGCAAGAGGTCTGGCTTTTTTGCATGAAGAGTCGCCACTGAAGGTTGTACATAGAGACATTAAAGCTACAAATATATTGCTAGACCAAGACCTCAATGCAAAGATCTCTGACTTCGGTTTGGCCAAACTTGACGAAGAGGAGAACACTCACATTAGCACCAGAGTTGCTGGAACCATAGGATACATGGCTCCAGAATATGCACTATGGGGTTATTTAACATATAAAGCAGATGTCTACAGTTTTGGTGTCGTTGCATTGGAAATTGTTGCTGGAAAGAACAATATGAAATATCGACCAAATGAGAACTTCGTATGCCTTGTGGATTGGGCTCTTGTTTTACAACAAAAGGGGAACTTAATAGAGCTAGTGGATCCAAGGTTGGGGTCCGATTTTGAAGTGGAAGAGGCAATTACAATGGTCAAGGTAGCGCTCTTATGCATCAATCCAGCACCAGCTCTCAGGCCGACCATGTCTGCAGTAGTGAGCATGCTTGAAGGACGGACACTTGTTCGTGAATCAGTCATGAACCCAAATATTTACGGCGATGAACTGAAGTTAGCATCCTTGAGAAACCCGTTTGATCTGACTGCACCGGGGGGTACAAGTGGAACTCAGAGCCTTGTTGGTTCATCAGATGCAACGTGTATTAATTCTTCTGCTACCACGTCCTCAGATCTCTATAAAATTGGTCCTAGTAGTAGTACATCTACTTAG

Protein Analysis

984

Amino Acids

109.33

Weight (kDa)

6.33

Isoelectric Point (pI)

34.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 77 - 276 1e-10 Leucine-rich repeat region
Malectin PF11721 380 - 563 9.8e-35 Malectin domain
Pkinase PF00069 641 - 906 3.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 642 - 907 1.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1101
AccBSI CCGCTC 1 cut(s) 1132
AccI GTMKAC 6 cut(s) 1412, 1665, 1695, 1959, 2210, 2472
AccII CGCG 2 cut(s) 1357, 1994
AciI CCGC 7 cut(s) 339, 563, 707, 939, 1132, 1196, 1994
AcoI YGGCCR 1 cut(s) 2358
AcsI RAATTY 3 cut(s) 377, 779, 2036
AcuI CTGAAG 5 cut(s) 142, 1740, 1870, 2297, 2810
AcvI CACGTG 1 cut(s) 353
AfeI AGCGCT 1 cut(s) 2667
AfiI CCNNNNNNNGG 6 cut(s) 500, 992, 1326, 1658, 2186, 2618
AflII CTTAAG 1 cut(s) 1396
AflIII ACRYGT 1 cut(s) 2879
AjiI CACGTC 1 cut(s) 2904
AjnI CCWGG 2 cut(s) 991, 1207
AjuI GAANNNNNNNTTGG 6 cut(s) 687, 719, 1917, 1932, 1949, 1964
Alw21I GWGCWC 1 cut(s) 24
Alw26I GTCTC 1 cut(s) 2286
Aor51HI AGCGCT 1 cut(s) 2667
AoxI GGCC 3 cut(s) 983, 2358, 2699
ApeKI GCWGC 5 cut(s) 174, 565, 1217, 1392, 1901
ApoI RAATTY 3 cut(s) 377, 779, 2036
AseI ATTAAT 1 cut(s) 2886
Asp700I GAANNNNTTC 1 cut(s) 1113
AspLEI GCGC 2 cut(s) 1357, 2668
AspS9I GGNCC 7 cut(s) 698, 983, 1670, 2177, 2189, 2622, 2927
AsuC2I CCSGG 2 cut(s) 2033, 2832
AsuHPI GGTGA 1 cut(s) 1873
AsuII TTCGAA 1 cut(s) 1191
AvaII GGWCC 6 cut(s) 698, 1670, 2177, 2189, 2622, 2927
BalI TGGCCA 1 cut(s) 2360
BamHI GGATCC 1 cut(s) 2608
BanI GGYRCC 1 cut(s) 1101
BanII GRGCYC 1 cut(s) 2569
BarI GAAGNNNNNNTAC 4 cut(s) 284, 316, 2875, 2907
BbrPI CACGTG 1 cut(s) 353
BbsI GAAGAC 1 cut(s) 1483
Bbv12I GWGCWC 1 cut(s) 24
BbvCI CCTCAGC 1 cut(s) 824
BbvI GCAGC 5 cut(s) 186, 577, 1229, 1379, 1888
BccI CCATC 2 cut(s) 289, 1973
BceAI ACGGC 1 cut(s) 2794
BciT130I CCWGG 2 cut(s) 993, 1209
BciVI GTATCC 2 cut(s) 1192, 2411
BcnI CCSGG 2 cut(s) 2033, 2832
BcoDI GTCTC 1 cut(s) 2286
BfaI CTAG 8 cut(s) 461, 684, 711, 1106, 1820, 2318, 2603, 2931
BfmI CTRYAG 2 cut(s) 2473, 2712
BfoI RGCGCY 1 cut(s) 2669
BfrI CTTAAG 1 cut(s) 1396
BfuI GTATCC 2 cut(s) 1192, 2411
BglII AGATCT 4 cut(s) 259, 892, 2340, 2911
BisI GCNGC 6 cut(s) 175, 566, 939, 1218, 1393, 1902
BlsI GCNGC 6 cut(s) 176, 567, 940, 1219, 1394, 1903
Bme1390I CCNGG 4 cut(s) 993, 1209, 2033, 2832
Bme18I GGWCC 6 cut(s) 698, 1670, 2177, 2189, 2622, 2927
BmgBI CACGTC 1 cut(s) 2904
BmgT120I GGNCC 7 cut(s) 698, 983, 1670, 2177, 2189, 2622, 2927
BmiI GGNNCC 5 cut(s) 1103, 2410, 2427, 2610, 2623
BmrFI CCNGG 4 cut(s) 993, 1209, 2033, 2832
BmrI ACTGGG 2 cut(s) 146, 990
BmsI GCATC 6 cut(s) 577, 798, 2080, 2685, 2807, 2863
BmuI ACTGGG 2 cut(s) 146, 990
BpiI GAAGAC 1 cut(s) 1483
BplI GAGNNNNNCTC 2 cut(s) 1121, 1153
BpmI CTGGAG 1 cut(s) 2412
Bpu10I CCTNAGC 2 cut(s) 335, 824
Bpu14I TTCGAA 1 cut(s) 1191
BpuEI CTTGAG 2 cut(s) 745, 2824
BpuMI CCSGG 2 cut(s) 2033, 2832
BsaAI YACGTR 3 cut(s) 128, 353, 1380
BsaBI GATNNNNATC 2 cut(s) 1203, 1442
BsaJI CCNNGG 3 cut(s) 694, 2612, 2831
BsaXI ACNNNNNCTCC 4 cut(s) 1755, 1785, 1801, 1831
Bsc4I CCNNNNNNNGG 6 cut(s) 500, 992, 1326, 1658, 2186, 2618
Bse1I ACTGG 9 cut(s) 141, 155, 628, 985, 1267, 1515, 1863, 1876, 2210
Bse3DI GCAATG 1 cut(s) 285
Bse8I GATNNNNATC 2 cut(s) 1203, 1442
BseBI CCWGG 2 cut(s) 993, 1209
BseDI CCNNGG 3 cut(s) 694, 2612, 2831
BseGI GGATG 5 cut(s) 281, 849, 1984, 2074, 2798
BseJI GATNNNNATC 2 cut(s) 1203, 1442
BseLI CCNNNNNNNGG 6 cut(s) 500, 992, 1326, 1658, 2186, 2618
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 9 cut(s) 789, 815, 910, 1044, 1053, 1692, 2710, 2864, 2922
BseNI ACTGG 9 cut(s) 141, 155, 628, 985, 1267, 1515, 1863, 1876, 2210
BseRI GAGGAG 5 cut(s) 841, 1356, 1674, 1704, 2390
BseXI GCAGC 5 cut(s) 186, 577, 1229, 1379, 1888
BsgI GTGCAG 1 cut(s) 2811
Bsh1236I CGCG 2 cut(s) 1357, 1994
Bsh1285I CGRYCG 1 cut(s) 1749
BshFI GGCC 3 cut(s) 985, 2360, 2701
BshNI GGYRCC 1 cut(s) 1101
BsiEI CGRYCG 1 cut(s) 1749
BsiHKAI GWGCWC 1 cut(s) 24
BsiSI CCGG 2 cut(s) 2032, 2831
BslFI GGGAC 3 cut(s) 423, 785, 1651
BslI CCNNNNNNNGG 6 cut(s) 500, 992, 1326, 1658, 2186, 2618
BsmAI GTCTC 1 cut(s) 2286
BsmFI GGGAC 3 cut(s) 423, 785, 1651
BsmI GAATGC 2 cut(s) 541, 1797
BsnI GGCC 3 cut(s) 985, 2360, 2701
Bsp119I TTCGAA 1 cut(s) 1191
Bsp1286I GDGCHC 2 cut(s) 24, 2569
Bsp1407I TGTACA 2 cut(s) 1344, 2284
BspACI CCGC 7 cut(s) 339, 563, 707, 939, 1132, 1196, 1994
BspANI GGCC 3 cut(s) 985, 2360, 2701
BspCNI CTCAG 9 cut(s) 788, 816, 909, 1045, 1054, 1693, 2709, 2863, 2921
BspFNI CGCG 2 cut(s) 1357, 1994
BspHI TCATGA 1 cut(s) 2760
BspLI GGNNCC 5 cut(s) 1103, 2410, 2427, 2610, 2623
BspMAI CTGCAG 1 cut(s) 2716
BspQI GCTCTTC 1 cut(s) 788
BspT104I TTCGAA 1 cut(s) 1191
BspT107I GGYRCC 1 cut(s) 1101
BspTI CTTAAG 1 cut(s) 1396
BsrBI CCGCTC 1 cut(s) 1132
BsrDI GCAATG 1 cut(s) 285
BsrGI TGTACA 2 cut(s) 1344, 2284
BsrI ACTGG 9 cut(s) 141, 155, 628, 985, 1267, 1515, 1863, 1876, 2210
BssECI CCNNGG 3 cut(s) 694, 2612, 2831
BssNAI GTATAC 2 cut(s) 1413, 1666
BssT1I CCWWGG 2 cut(s) 694, 2612
Bst1107I GTATAC 2 cut(s) 1413, 1666
Bst2UI CCWGG 2 cut(s) 993, 1209
Bst4CI ACNGT 7 cut(s) 394, 1154, 1417, 1469, 1670, 1747, 2477
Bst6I CTCTTC 4 cut(s) 788, 2259, 2367, 2634
BstAFI CTTAAG 1 cut(s) 1396
BstAUI TGTACA 2 cut(s) 1344, 2284
BstBAI YACGTR 3 cut(s) 128, 353, 1380
BstBI TTCGAA 1 cut(s) 1191
BstC8I GCNNGC 3 cut(s) 800, 943, 2726
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 5 cut(s) 281, 849, 1984, 2074, 2798
BstFNI CGCG 2 cut(s) 1357, 1994
BstH2I RGCGCY 1 cut(s) 2669
BstHHI GCGC 2 cut(s) 1357, 2668
BstMAI GTCTC 1 cut(s) 2286
BstMCI CGRYCG 1 cut(s) 1749
BstMWI GCNNNNNNNGC 5 cut(s) 92, 180, 565, 808, 982
BstNI CCWGG 2 cut(s) 993, 1209
BstNSI RCATGY 2 cut(s) 802, 2728
BstSCI CCNGG 4 cut(s) 991, 1207, 2031, 2830
BstSFI CTRYAG 2 cut(s) 2473, 2712
BstSNI TACGTA 1 cut(s) 128
BstUI CGCG 2 cut(s) 1357, 1994
BstV1I GCAGC 5 cut(s) 186, 577, 1229, 1379, 1888
BstV2I GAAGAC 1 cut(s) 1483
BstXI CCANNNNNNTGG 3 cut(s) 106, 357, 686
BstZ17I GTATAC 2 cut(s) 1413, 1666
BsuI GTATCC 2 cut(s) 1192, 2411
BsuRI GGCC 3 cut(s) 985, 2360, 2701
BtgZI GCGATG 1 cut(s) 2796
BtrI CACGTC 1 cut(s) 2904
BtsCI GGATG 5 cut(s) 281, 849, 1984, 2074, 2798
BtsIMutI CAGTG 5 cut(s) 621, 757, 978, 1260, 2273
Cac8I GCNNGC 3 cut(s) 800, 943, 2726
CciI TCATGA 1 cut(s) 2760
CfoI GCGC 2 cut(s) 1357, 2668
Cfr13I GGNCC 7 cut(s) 698, 983, 1670, 2177, 2189, 2622, 2927
CseI GACGC 1 cut(s) 1346
EaeI YGGCCR 1 cut(s) 2358
Eam1104I CTCTTC 4 cut(s) 788, 2259, 2367, 2634
EarI CTCTTC 4 cut(s) 788, 2259, 2367, 2634
EciI GGCGGA 1 cut(s) 696
Eco105I TACGTA 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 694, 2612
Eco24I GRGCYC 1 cut(s) 2569
Eco47I GGWCC 6 cut(s) 698, 1670, 2177, 2189, 2622, 2927
Eco47III AGCGCT 1 cut(s) 2667
Eco57I CTGAAG 5 cut(s) 142, 1740, 1870, 2297, 2810
Eco72I CACGTG 1 cut(s) 353
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRII CCWGG 2 cut(s) 991, 1207
EcoT14I CCWWGG 2 cut(s) 694, 2612
EcoT22I ATGCAT 2 cut(s) 2231, 2678
EcoT38I GRGCYC 1 cut(s) 2569
ErhI CCWWGG 2 cut(s) 694, 2612
FalI AAGNNNNNCTT 4 cut(s) 1274, 1306, 2576, 2608
FaqI GGGAC 3 cut(s) 423, 785, 1651
FblI GTMKAC 6 cut(s) 1412, 1665, 1695, 1959, 2210, 2472
Fnu4HI GCNGC 6 cut(s) 175, 566, 939, 1218, 1393, 1902
FokI GGATG 5 cut(s) 268, 836, 1991, 2061, 2785
FriOI GRGCYC 1 cut(s) 2569
Fsp4HI GCNGC 6 cut(s) 175, 566, 939, 1218, 1393, 1902
FspBI CTAG 8 cut(s) 461, 684, 711, 1106, 1820, 2318, 2603, 2931
GlaI GCGC 2 cut(s) 1356, 2667
GluI GCNGC 6 cut(s) 175, 566, 939, 1218, 1393, 1902
GsuI CTGGAG 1 cut(s) 2412
HaeII RGCGCY 1 cut(s) 2669
HaeIII GGCC 3 cut(s) 985, 2360, 2701
HapII CCGG 2 cut(s) 2032, 2831
HgaI GACGC 1 cut(s) 1346
HhaI GCGC 2 cut(s) 1357, 2668
Hin6I GCGC 2 cut(s) 1355, 2666
HinP1I GCGC 2 cut(s) 1355, 2666
HincII GTYRAC 3 cut(s) 514, 591, 1555
HindII GTYRAC 3 cut(s) 514, 591, 1555
HindIII AAGCTT 1 cut(s) 1845
HinfI GANTC 8 cut(s) 747, 773, 1277, 1334, 1711, 2111, 2267, 2753
HpaI GTTAAC 2 cut(s) 514, 591
HpaII CCGG 2 cut(s) 2032, 2831
HphI GGTGA 1 cut(s) 1873
HpyAV CCTTC 6 cut(s) 908, 1894, 1934, 2180, 2272, 2726
HpyCH4III ACNGT 7 cut(s) 394, 1154, 1417, 1469, 1670, 1747, 2477
HpyCH4IV ACGT 6 cut(s) 127, 352, 1379, 1576, 2879, 2903
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 180, 565, 808, 982
HpySE526I ACGT 6 cut(s) 127, 352, 1379, 1576, 2879, 2903
HspAI GCGC 2 cut(s) 1355, 2666
KspAI GTTAAC 2 cut(s) 514, 591
LguI GCTCTTC 1 cut(s) 788
LmnI GCTCC 4 cut(s) 100, 828, 1763, 2431
Lsp1109I GCAGC 5 cut(s) 186, 577, 1229, 1379, 1888
LweI GCATC 6 cut(s) 577, 798, 2080, 2685, 2807, 2863
MaeI CTAG 8 cut(s) 461, 684, 711, 1106, 1820, 2318, 2603, 2931
MaeII ACGT 6 cut(s) 127, 352, 1379, 1576, 2879, 2903
MaeIII GTNAC 2 cut(s) 294, 752
MbiI CCGCTC 1 cut(s) 1132
MboII GAAGA 8 cut(s) 154, 667, 805, 1488, 2276, 2384, 2651, 2883
MfeI CAATTG 1 cut(s) 54
MhlI GDGCHC 2 cut(s) 24, 2569
MlsI TGGCCA 1 cut(s) 2360
MluNI TGGCCA 1 cut(s) 2360
MlyI GAGTC 4 cut(s) 767, 1328, 1705, 2276
MmeI TCCRAC 5 cut(s) 354, 632, 1729, 1741, 1956
Mox20I TGGCCA 1 cut(s) 2360
Mph1103I ATGCAT 2 cut(s) 2231, 2678
MroXI GAANNNNTTC 1 cut(s) 1113
MscI TGGCCA 1 cut(s) 2360
MslI CAYNNNNRTG 2 cut(s) 355, 392
Msp20I TGGCCA 1 cut(s) 2360
MspCI CTTAAG 1 cut(s) 1396
MspI CCGG 2 cut(s) 2032, 2831
MspR9I CCNGG 4 cut(s) 993, 1209, 2033, 2832
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 2 cut(s) 541, 1797
MvaI CCWGG 2 cut(s) 993, 1209
MvnI CGCG 2 cut(s) 1357, 1994
MwoI GCNNNNNNNGC 5 cut(s) 92, 180, 565, 808, 982
NciI CCSGG 2 cut(s) 2033, 2832
NlaIV GGNNCC 5 cut(s) 1103, 2410, 2427, 2610, 2623
NmuCI GTSAC 1 cut(s) 752
NsiI ATGCAT 2 cut(s) 2231, 2678
NspI RCATGY 2 cut(s) 802, 2728
NspV TTCGAA 1 cut(s) 1191
PaeI GCATGC 2 cut(s) 802, 2728
PagI TCATGA 1 cut(s) 2760
PciSI GCTCTTC 1 cut(s) 788
PctI GAATGC 2 cut(s) 541, 1797
PdmI GAANNNNTTC 1 cut(s) 1113
PfeI GAWTC 4 cut(s) 747, 1277, 2111, 2753
PflFI GACNNNGTC 1 cut(s) 2707
PkrI GCNGC 6 cut(s) 176, 567, 940, 1219, 1394, 1903
PleI GAGTC 4 cut(s) 767, 1328, 1705, 2275
PmaCI CACGTG 1 cut(s) 353
PmlI CACGTG 1 cut(s) 353
PpsI GAGTC 4 cut(s) 767, 1328, 1705, 2275
Ppu21I YACGTR 3 cut(s) 128, 353, 1380
PshBI ATTAAT 1 cut(s) 2886
Psp6I CCWGG 2 cut(s) 991, 1207
PspCI CACGTG 1 cut(s) 353
PspGI CCWGG 2 cut(s) 991, 1207
PspN4I GGNNCC 5 cut(s) 1103, 2410, 2427, 2610, 2623
PspPI GGNCC 7 cut(s) 698, 983, 1670, 2177, 2189, 2622, 2927
PstI CTGCAG 1 cut(s) 2716
PsyI GACNNNGTC 1 cut(s) 2707
RseI CAYNNNNRTG 2 cut(s) 355, 392
SapI GCTCTTC 1 cut(s) 788
SatI GCNGC 6 cut(s) 175, 566, 939, 1218, 1393, 1902
Sau96I GGNCC 7 cut(s) 698, 983, 1670, 2177, 2189, 2622, 2927
SchI GAGTC 4 cut(s) 767, 1328, 1705, 2276
ScrFI CCNGG 4 cut(s) 993, 1209, 2033, 2832
SduI GDGCHC 2 cut(s) 24, 2569
SfaNI GCATC 6 cut(s) 577, 798, 2080, 2685, 2807, 2863
SfcI CTRYAG 2 cut(s) 2473, 2712
SfuI TTCGAA 1 cut(s) 1191
SinI GGWCC 6 cut(s) 698, 1670, 2177, 2189, 2622, 2927
SmiMI CAYNNNNRTG 2 cut(s) 355, 392
SmlI CTYRAG 3 cut(s) 724, 1396, 2803
SmoI CTYRAG 3 cut(s) 724, 1396, 2803
SnaBI TACGTA 1 cut(s) 128
SphI GCATGC 2 cut(s) 802, 2728
SsiI CCGC 7 cut(s) 339, 563, 707, 939, 1132, 1196, 1994
SspI AATATT 1 cut(s) 2773
SspMI CTAG 8 cut(s) 461, 684, 711, 1106, 1820, 2318, 2603, 2931
StyD4I CCNGG 4 cut(s) 991, 1207, 2031, 2830
StyI CCWWGG 2 cut(s) 694, 2612
TaaI ACNGT 7 cut(s) 394, 1154, 1417, 1469, 1670, 1747, 2477
TaiI ACGT 6 cut(s) 130, 355, 1382, 1579, 2882, 2906
TaqI TCGA 4 cut(s) 365, 1191, 1533, 2530
TaqII GACCGA 1 cut(s) 2165
TatI WGTACW 4 cut(s) 271, 1344, 2284, 2939
TauI GCSGC 1 cut(s) 941
TfiI GAWTC 4 cut(s) 747, 1277, 2111, 2753
TscAI CASTG 5 cut(s) 628, 757, 985, 1267, 2280
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 5 cut(s) 174, 565, 1217, 1392, 1901
Tsp45I GTSAC 1 cut(s) 752
TspGWI ACGGA 3 cut(s) 1025, 1495, 2752
TspRI CASTG 5 cut(s) 628, 757, 985, 1267, 2280
Tth111I GACNNNGTC 1 cut(s) 2707
Vha464I CTTAAG 1 cut(s) 1396
VpaK11BI GGWCC 6 cut(s) 698, 1670, 2177, 2189, 2622, 2927
VspI ATTAAT 1 cut(s) 2886
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 3 cut(s) 377, 779, 2036
XbaI TCTAGA 1 cut(s) 1819
XceI RCATGY 2 cut(s) 802, 2728
XcmI CCANNNNNNNNNTGG 1 cut(s) 2419
XmiI GTMKAC 6 cut(s) 1412, 1665, 1695, 1959, 2210, 2472
XmnI GAANNNNTTC 1 cut(s) 1113
XspI CTAG 8 cut(s) 461, 684, 711, 1106, 1820, 2318, 2603, 2931
Zsp2I ATGCAT 2 cut(s) 2231, 2678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.