Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007030.1

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

34812 .. 41036

Gene Structure 6225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007030.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

atgacacaagctggactaccccagaatctgatgacagacctctattcaacaacactctcacttgcaactgctccttccctgatggctcatgccatgtcatctacatgtaggtgcattcgaagcctgtttgatgtgtcctttaatgtgaacaacttatctggaccaatccctgccttcttgggaaacatcaccactctaaaatacttgaatctagagactaacatgtttactggaactgttcctcctgaacttgggaagttggttaacttgcaaaatctcattattagtgcaaacaatctcacaggagcgttaccagtgaatctcactaatctgaacaaactaacagaattgaggataagcagtaacaacttcactggaagaattccagacttttttcgaagttggaatcaacttataaaattagagatccaagctagtggtctacaaggccccattccgtctagcatttctgtcttgattcagtacacattgcatataaattgtggtggagaatcgaccaccgttggaggaatcaaatttgaagatgatacagatcttggaggtggagcaaaatttgttccagtgagagctaactggggaaccagtagcactggagttttctgggacactaatgtcacctctaaagactacatagcaaataatgtatcattacttggaatggaaaactctcagttgtacactcatgcgcgcctcagtcctctttctctcacatattatgcaaactgcttaggagatggaaattatactgtcaaacttcactttgcggagataataatacgagccaatagatcttttcagagtgttggaagacggatatttgatgtctacatccaggagaaacttgtatggaagaattttgacatcgtaaaggaagcaccaggggttgacaaggtatacattatagaaacaaatgcagttcaagttacaaacaaaactctagagattcgttttcattggtctggaaaaggcacaacagcatcccctagacggggagtctatggtccccttatatcagccatttctatagaagctgagttcaagcattccaaaacagagatgtatattgtggttggagtttcagttggagcttcggttttgtgcctgttcttcttaatttgtggcattctttggtggaaaggctgtctggtggatagtcagacatcaagggaagaaggtgctgctaatcaactatttctgagaggactggatctgcagactggctttttcaccttgaggcaaattaaagctgccactaataactttgatcctttaaacaaaattggagaaggtggttttggtcctgtctacaagggtatactattggatggtactataattgcagttaagcaactatcttcaaaatcgaagcagggaaatcgtgaatttgtgaacgaaataggcatgatctcttgtttgcagcatccaaatctggttagaatgtatggatgttgtattgaagcaaaccaattattgttggtatatgagtacatggagaacaatagccttgctcgcgctttgtacggtccagaggatgatgccataaatttggactggcctacaaggcagaaaatatgcctaggcatagcaaaaggtctggcttatttgcatgaggaatcggcggtgaaggttgtacatagagacataaaaactacgaatgttttactggaccgagacctcaatgctaagatctcagactttggtttggctaagcttgacgaagaggagaacactcacattagcaccaggattgctggaactataggatacatggcaccggaatatgctctatggggttgtttgacctttaaagcagatgtctacagttttggagttgttgcattagaaactgttacaggaaagaacaacatgaaatatcgaccagatgagaacattcaatgtcttatggattgggcccttgttttgcaacaaagtgggaacttactggagctggtggatccgaggttggggtccgatttcagtaagaaagaggcgattagaacgatcaaagtagctctactgtgcgctaacccaacagctgcacttaggcccatcatgtctgcagttgtgagtatgcttgaagggcggacccccgtggatgaagtggctctggatccaagtatccatggtgatgaaatgacgaggttaagagccttcgaagagcagtttgatcacagtactgcacaagggagctccccaagtggaagtcatagcctcattcgttcatcagatgcaccatggactggttcttctggtactactacgtcttcagatctctataaatgtagtctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

770

Amino Acids

84.6

Weight (kDa)

6.16

Isoelectric Point (pI)

34.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	416
AasI	GACNNNNNNGTC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	1792
AccB7I	CCANNNNNTGG	1 cut(s)	2261
AccI	GTMKAC	6 cut(s)	442, 846, 915, 1326, 1336, 1839
AccII	CGCG	2 cut(s)	709, 1533
AciI	CCGC	3 cut(s)	785, 1640, 2104
AclWI	GGATC	7 cut(s)	421, 1236, 1280, 1970, 1983, 2126, 2139
AcsI	RAATTY	6 cut(s)	381, 536, 572, 874, 1403, 1564
AcuI	CTGAAG	1 cut(s)	2271
AfaI	GTAC	8 cut(s)	485, 698, 1351, 1508, 1541, 1653, 2197, 2275
AfiI	CCNNNNNNNGG	6 cut(s)	251, 1008, 1009, 1010, 1985, 2261
AflIII	ACRYGT	2 cut(s)	104, 222
AgsI	TTSAA	9 cut(s)	48, 208, 542, 941, 1060, 1380, 1478, 1916, 2099
AhdI	GACNNNNNGTC	1 cut(s)	1013
AjnI	CCWGG	3 cut(s)	852, 898, 1763
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AloI	GAACNNNNNNTCC	2 cut(s)	226, 258
Alw21I	GWGCWC	1 cut(s)	2213
Alw26I	GTCTC	3 cut(s)	209, 1653, 1686
AlwI	GGATC	7 cut(s)	421, 1236, 1280, 1970, 1983, 2126, 2139
AlwNI	CAGNNNCTG	1 cut(s)	28
AoxI	GGCC	4 cut(s)	448, 1574, 1932, 2066
ApaI	GGGCCC	1 cut(s)	1936
ApeKI	GCWGC	4 cut(s)	1199, 1268, 1438, 2057
ApoI	RAATTY	6 cut(s)	381, 536, 572, 874, 1403, 1564
AspA2I	CCTAGG	1 cut(s)	1597
AspLEI	GCGC	4 cut(s)	709, 711, 1535, 2045
AsuHPI	GGTGA	5 cut(s)	181, 628, 1240, 1654, 2159
AsuII	TTCGAA	3 cut(s)	118, 397, 2175
AvaII	GGWCC	7 cut(s)	161, 1022, 1319, 1544, 1687, 1989, 2106
AvrII	CCTAGG	1 cut(s)	1597
BaeGI	GKGCMC	1 cut(s)	1936
BamHI	GGATCC	2 cut(s)	1975, 2131
BanI	GGYRCC	1 cut(s)	1792
BanII	GRGCYC	2 cut(s)	1936, 2213
BbsI	GAAGAC	2 cut(s)	835, 2277
Bbv12I	GWGCWC	1 cut(s)	2213
BbvI	GCAGC	4 cut(s)	1186, 1255, 1450, 2044
BccI	CCATC	4 cut(s)	76, 749, 1340, 2078
BcgI	CGANNNNNNTGC	2 cut(s)	1379, 1413
BciT130I	CCWGG	3 cut(s)	854, 900, 1765
BciVI	GTATCC	2 cut(s)	1778, 2150
BclI	TGATCA	1 cut(s)	2188
BcoDI	GTCTC	3 cut(s)	209, 1653, 1686
BfaI	CTAG	6 cut(s)	212, 435, 462, 959, 1005, 1598
BfmI	CTRYAG	5 cut(s)	1044, 1232, 1779, 1840, 2079
BfuI	GTATCC	2 cut(s)	1778, 2150
BglI	GCCNNNNNGGC	1 cut(s)	1582
BglII	AGATCT	4 cut(s)	553, 809, 1707, 2290
BisI	GCNGC	4 cut(s)	1200, 1269, 1439, 2058
BlnI	CCTAGG	1 cut(s)	1597
BlpI	GCTNAGC	1 cut(s)	1728
BlsI	GCNGC	4 cut(s)	1201, 1270, 1440, 2059
BmcAI	AGTACT	1 cut(s)	2197
Bme1390I	CCNGG	3 cut(s)	854, 900, 1765
Bme18I	GGWCC	7 cut(s)	161, 1022, 1319, 1544, 1687, 1989, 2106
BmeRI	GACNNNNNGTC	1 cut(s)	1013
BmiI	GGNNCC	9 cut(s)	451, 601, 1024, 1794, 1934, 1977, 1990, 2108, 2133
BmrFI	CCNGG	3 cut(s)	854, 900, 1765
BmrI	ACTGGG	1 cut(s)	604
BmsI	GCATC	4 cut(s)	1007, 1450, 1546, 2239
BmuI	ACTGGG	1 cut(s)	604
BpiI	GAAGAC	2 cut(s)	835, 2277
BpmI	CTGGAG	2 cut(s)	633, 1985
Bpu10I	CCTNAGC	1 cut(s)	748
Bpu1102I	GCTNAGC	1 cut(s)	1728
Bpu14I	TTCGAA	3 cut(s)	118, 397, 2175
BpuEI	CTTGAG	1 cut(s)	1273
BsaBI	GATNNNNATC	1 cut(s)	552
BsaI	GGTCTC	1 cut(s)	1686
BsaJI	CCNNGG	6 cut(s)	899, 1597, 1979, 2112, 2143, 2255
BsaWI	WCCGGW	1 cut(s)	1795
BsaXI	ACNNNNNCTCC	6 cut(s)	226, 256, 1086, 1098, 1116, 1128
Bsc4I	CCNNNNNNNGG	6 cut(s)	251, 1008, 1009, 1010, 1985, 2261
Bse3DI	GCAATG	1 cut(s)	488
Bse8I	GATNNNNATC	1 cut(s)	552
BseBI	CCWGG	3 cut(s)	854, 900, 1765
BseDI	CCNNGG	6 cut(s)	899, 1597, 1979, 2112, 2143, 2255
BseGI	GGATG	7 cut(s)	849, 998, 1351, 1441, 1472, 1558, 2122
BseJI	GATNNNNATC	1 cut(s)	552
BseLI	CCNNNNNNNGG	6 cut(s)	251, 1008, 1009, 1010, 1985, 2261
BseMI	GCAATG	1 cut(s)	488
BseMII	CTCAG	5 cut(s)	704, 727, 1044, 1208, 1725
BsePI	GCGCGC	1 cut(s)	707
BseRI	GAGGAG	1 cut(s)	1757
BseSI	GKGCMC	1 cut(s)	1936
BseXI	GCAGC	4 cut(s)	1186, 1255, 1450, 2044
BsgI	GTGCAG	2 cut(s)	2043, 2184
Bsh1236I	CGCG	2 cut(s)	709, 1533
BshFI	GGCC	4 cut(s)	450, 1576, 1934, 2068
BshNI	GGYRCC	1 cut(s)	1792
BsiHKAI	GWGCWC	1 cut(s)	2213
BsiSI	CCGG	1 cut(s)	1796
BslFI	GGGAC	2 cut(s)	638, 1008
BslI	CCNNNNNNNGG	6 cut(s)	251, 1008, 1009, 1010, 1985, 2261
BsmAI	GTCTC	3 cut(s)	209, 1653, 1686
BsmFI	GGGAC	2 cut(s)	638, 1008
BsmI	GAATGC	3 cut(s)	114, 1063, 1143
BsnI	GGCC	4 cut(s)	450, 1576, 1934, 2068
Bso31I	GGTCTC	1 cut(s)	1686
Bsp119I	TTCGAA	3 cut(s)	118, 397, 2175
Bsp120I	GGGCCC	1 cut(s)	1932
Bsp1286I	GDGCHC	2 cut(s)	1936, 2213
Bsp1407I	TGTACA	2 cut(s)	696, 1651
Bsp1720I	GCTNAGC	1 cut(s)	1728
Bsp19I	CCATGG	2 cut(s)	2143, 2255
BspACI	CCGC	3 cut(s)	785, 1640, 2104
BspANI	GGCC	4 cut(s)	450, 1576, 1934, 2068
BspCNI	CTCAG	5 cut(s)	703, 726, 1045, 1209, 1724
BspFNI	CGCG	2 cut(s)	709, 1533
BspLI	GGNNCC	9 cut(s)	451, 601, 1024, 1794, 1934, 1977, 1990, 2108, 2133
BspMAI	CTGCAG	2 cut(s)	1236, 2083
BspPI	GGATC	7 cut(s)	421, 1236, 1280, 1970, 1983, 2126, 2139
BspQI	GCTCTTC	1 cut(s)	2172
BspT104I	TTCGAA	3 cut(s)	118, 397, 2175
BspT107I	GGYRCC	1 cut(s)	1792
BspTNI	GGTCTC	1 cut(s)	1686
BsrDI	GCAATG	1 cut(s)	488
BsrGI	TGTACA	2 cut(s)	696, 1651
BssECI	CCNNGG	6 cut(s)	899, 1597, 1979, 2112, 2143, 2255
BssHII	GCGCGC	1 cut(s)	707
BssNAI	GTATAC	2 cut(s)	916, 1337
BssT1I	CCWWGG	3 cut(s)	1597, 2143, 2255
Bst1107I	GTATAC	2 cut(s)	916, 1337
Bst2UI	CCWGG	3 cut(s)	854, 900, 1765
Bst4CI	ACNGT	8 cut(s)	238, 523, 769, 1544, 1844, 1870, 2040, 2195
Bst6I	CTCTTC	2 cut(s)	1734, 2172
BstAUI	TGTACA	2 cut(s)	696, 1651
BstBI	TTCGAA	3 cut(s)	118, 397, 2175
BstC8I	GCNNGC	2 cut(s)	709, 1531
BstDEI	CTNAG	9 cut(s)	690, 713, 748, 1053, 1217, 1704, 1711, 1728, 2063
BstDSI	CCRYGG	3 cut(s)	2112, 2143, 2255
BstF5I	GGATG	7 cut(s)	849, 998, 1351, 1441, 1472, 1558, 2122
BstFNI	CGCG	2 cut(s)	709, 1533
BstHHI	GCGC	4 cut(s)	709, 711, 1535, 2045
BstMAI	GTCTC	3 cut(s)	209, 1653, 1686
BstMWI	GCNNNNNNNGC	4 cut(s)	120, 1530, 1582, 2101
BstNI	CCWGG	3 cut(s)	854, 900, 1765
BstNSI	RCATGY	2 cut(s)	108, 226
BstSCI	CCNGG	3 cut(s)	852, 898, 1763
BstSFI	CTRYAG	5 cut(s)	1044, 1232, 1779, 1840, 2079
BstSLI	GKGCMC	1 cut(s)	1936
BstUI	CGCG	2 cut(s)	709, 1533
BstV1I	GCAGC	4 cut(s)	1186, 1255, 1450, 2044
BstV2I	GAAGAC	2 cut(s)	835, 2277
BstX2I	RGATCY	8 cut(s)	426, 553, 809, 1228, 1707, 1975, 2131, 2290
BstXI	CCANNNNNNTGG	2 cut(s)	437, 1567
BstYI	RGATCY	8 cut(s)	426, 553, 809, 1228, 1707, 1975, 2131, 2290
BstZ17I	GTATAC	2 cut(s)	916, 1337
BsuI	GTATCC	2 cut(s)	1778, 2150
BsuRI	GGCC	4 cut(s)	450, 1576, 1934, 2068
BtgI	CCRYGG	3 cut(s)	2112, 2143, 2255
BtsCI	GGATG	7 cut(s)	849, 998, 1351, 1441, 1472, 1558, 2122
BtsIMutI	CAGTG	4 cut(s)	321, 372, 588, 609
Cac8I	GCNNGC	2 cut(s)	709, 1531
CaiI	CAGNNNCTG	1 cut(s)	28
CfoI	GCGC	4 cut(s)	709, 711, 1535, 2045
Csp6I	GTAC	8 cut(s)	484, 697, 1350, 1507, 1540, 1652, 2196, 2274
CviQI	GTAC	8 cut(s)	484, 697, 1350, 1507, 1540, 1652, 2196, 2274
DdeI	CTNAG	9 cut(s)	690, 713, 748, 1053, 1217, 1704, 1711, 1728, 2063
DraI	TTTAAA	2 cut(s)	1293, 1828
DrdI	GACNNNNNNGTC	1 cut(s)	632
DriI	GACNNNNNGTC	1 cut(s)	1013
DseDI	GACNNNNNNGTC	1 cut(s)	632
Eam1104I	CTCTTC	2 cut(s)	1734, 2172
Eam1105I	GACNNNNNGTC	1 cut(s)	1013
EarI	CTCTTC	2 cut(s)	1734, 2172
EciI	GGCGGA	1 cut(s)	2119
Ecl136II	GAGCTC	1 cut(s)	2211
Eco130I	CCWWGG	3 cut(s)	1597, 2143, 2255
Eco24I	GRGCYC	2 cut(s)	1936, 2213
Eco31I	GGTCTC	1 cut(s)	1686
Eco47I	GGWCC	7 cut(s)	161, 1022, 1319, 1544, 1687, 1989, 2106
Eco53kI	GAGCTC	1 cut(s)	2211
Eco57I	CTGAAG	1 cut(s)	2271
EcoICRI	GAGCTC	1 cut(s)	2211
EcoO109I	RGGNCCY	2 cut(s)	449, 1933
EcoRI	GAATTC	1 cut(s)	381
EcoRII	CCWGG	3 cut(s)	852, 898, 1763
EcoT14I	CCWWGG	3 cut(s)	1597, 2143, 2255
EcoT38I	GRGCYC	2 cut(s)	1936, 2213
ErhI	CCWWGG	3 cut(s)	1597, 2143, 2255
FaqI	GGGAC	2 cut(s)	638, 1008
FbaI	TGATCA	1 cut(s)	2188
FblI	GTMKAC	6 cut(s)	442, 846, 915, 1326, 1336, 1839
Fnu4HI	GCNGC	4 cut(s)	1200, 1269, 1439, 2058
FokI	GGATG	7 cut(s)	836, 985, 1358, 1428, 1479, 1565, 2129
FriOI	GRGCYC	2 cut(s)	1936, 2213
Fsp4HI	GCNGC	4 cut(s)	1200, 1269, 1439, 2058
FspBI	CTAG	6 cut(s)	212, 435, 462, 959, 1005, 1598
GlaI	GCGC	4 cut(s)	708, 710, 1534, 2044
GluI	GCNGC	4 cut(s)	1200, 1269, 1439, 2058
GsuI	CTGGAG	2 cut(s)	633, 1985
HaeIII	GGCC	4 cut(s)	450, 1576, 1934, 2068
HapII	CCGG	1 cut(s)	1796
HhaI	GCGC	4 cut(s)	709, 711, 1535, 2045
Hin6I	GCGC	4 cut(s)	707, 709, 1533, 2043
HinP1I	GCGC	4 cut(s)	707, 709, 1533, 2043
HincII	GTYRAC	2 cut(s)	265, 907
HindII	GTYRAC	2 cut(s)	265, 907
HindIII	AAGCTT	1 cut(s)	1730
HpaI	GTTAAC	1 cut(s)	265
HpaII	CCGG	1 cut(s)	1796
HphI	GGTGA	5 cut(s)	181, 628, 1240, 1654, 2159
HpyAV	CCTTC	7 cut(s)	84, 184, 1187, 1301, 1639, 2093, 2182
HpyCH4III	ACNGT	8 cut(s)	238, 523, 769, 1544, 1844, 1870, 2040, 2195
HpyCH4IV	ACGT	1 cut(s)	2282
HpyF10VI	GCNNNNNNNGC	4 cut(s)	120, 1530, 1582, 2101
HpyF3I	CTNAG	9 cut(s)	690, 713, 748, 1053, 1217, 1704, 1711, 1728, 2063
HpySE526I	ACGT	1 cut(s)	2282
HspAI	GCGC	4 cut(s)	707, 709, 1533, 2043
Ksp22I	TGATCA	1 cut(s)	2188
KspAI	GTTAAC	1 cut(s)	265
LguI	GCTCTTC	1 cut(s)	2172
LmnI	GCTCC	7 cut(s)	76, 305, 566, 1106, 1966, 2208, 2216
Lsp1109I	GCAGC	4 cut(s)	1186, 1255, 1450, 2044
LweI	GCATC	4 cut(s)	1007, 1450, 1546, 2239
MaeI	CTAG	6 cut(s)	212, 435, 462, 959, 1005, 1598
MaeII	ACGT	1 cut(s)	2282
MaeIII	GTNAC	5 cut(s)	309, 362, 634, 943, 1870
MflI	RGATCY	8 cut(s)	426, 553, 809, 1228, 1707, 1975, 2131, 2290
MhlI	GDGCHC	2 cut(s)	1936, 2213
MlyI	GAGTC	1 cut(s)	1023
MmeI	TCCRAC	5 cut(s)	383, 505, 805, 1072, 1084
MseI	TTAA	9 cut(s)	141, 264, 1133, 1263, 1292, 1365, 1827, 2165, 2311
MslI	CAYNNNNRTG	3 cut(s)	103, 109, 2148
MspA1I	CMGCKG	1 cut(s)	2057
MspI	CCGG	1 cut(s)	1796
MspR9I	CCNGG	3 cut(s)	854, 900, 1765
Mva1269I	GAATGC	3 cut(s)	114, 1063, 1143
MvaI	CCWGG	3 cut(s)	854, 900, 1765
MvnI	CGCG	2 cut(s)	709, 1533
MwoI	GCNNNNNNNGC	4 cut(s)	120, 1530, 1582, 2101
NcoI	CCATGG	2 cut(s)	2143, 2255
NlaIV	GGNNCC	9 cut(s)	451, 601, 1024, 1794, 1934, 1977, 1990, 2108, 2133
NmuCI	GTSAC	1 cut(s)	634
NspI	RCATGY	2 cut(s)	108, 226
NspV	TTCGAA	3 cut(s)	118, 397, 2175
PauI	GCGCGC	1 cut(s)	707
PciI	ACATGT	2 cut(s)	104, 222
PciSI	GCTCTTC	1 cut(s)	2172
PctI	GAATGC	3 cut(s)	114, 1063, 1143
PfeI	GAWTC	9 cut(s)	25, 208, 319, 406, 478, 512, 531, 964, 1634
PflMI	CCANNNNNTGG	1 cut(s)	2261
PfoI	TCCNGGA	1 cut(s)	852
PkrI	GCNGC	4 cut(s)	1201, 1270, 1440, 2059
PleI	GAGTC	1 cut(s)	1022
PpsI	GAGTC	1 cut(s)	1022
PscI	ACATGT	2 cut(s)	104, 222
PsiI	TTATAA	1 cut(s)	416
Psp124BI	GAGCTC	1 cut(s)	2213
Psp6I	CCWGG	3 cut(s)	852, 898, 1763
PspGI	CCWGG	3 cut(s)	852, 898, 1763
PspN4I	GGNNCC	9 cut(s)	451, 601, 1024, 1794, 1934, 1977, 1990, 2108, 2133
PspOMI	GGGCCC	1 cut(s)	1932
PstI	CTGCAG	2 cut(s)	1236, 2083
PstNI	CAGNNNCTG	1 cut(s)	28
PsuI	RGATCY	8 cut(s)	426, 553, 809, 1228, 1707, 1975, 2131, 2290
PteI	GCGCGC	1 cut(s)	707
PvuII	CAGCTG	1 cut(s)	2057
RsaI	GTAC	8 cut(s)	485, 698, 1351, 1508, 1541, 1653, 2197, 2275
RsaNI	GTAC	8 cut(s)	484, 697, 1350, 1507, 1540, 1652, 2196, 2274
RseI	CAYNNNNRTG	3 cut(s)	103, 109, 2148
SacI	GAGCTC	1 cut(s)	2213
SapI	GCTCTTC	1 cut(s)	2172
SaqAI	TTAA	9 cut(s)	141, 264, 1133, 1263, 1292, 1365, 1827, 2165, 2311
SatI	GCNGC	4 cut(s)	1200, 1269, 1439, 2058
ScaI	AGTACT	1 cut(s)	2197
SchI	GAGTC	1 cut(s)	1023
ScrFI	CCNGG	3 cut(s)	854, 900, 1765
SduI	GDGCHC	2 cut(s)	1936, 2213
SfaNI	GCATC	4 cut(s)	1007, 1450, 1546, 2239
SfcI	CTRYAG	5 cut(s)	1044, 1232, 1779, 1840, 2079
SfuI	TTCGAA	3 cut(s)	118, 397, 2175
SinI	GGWCC	7 cut(s)	161, 1022, 1319, 1544, 1687, 1989, 2106
SmiMI	CAYNNNNRTG	3 cut(s)	103, 109, 2148
SmlI	CTYRAG	1 cut(s)	1252
SmoI	CTYRAG	1 cut(s)	1252
SsiI	CCGC	3 cut(s)	785, 1640, 2104
SspMI	CTAG	6 cut(s)	212, 435, 462, 959, 1005, 1598
SstI	GAGCTC	1 cut(s)	2213
StyD4I	CCNGG	3 cut(s)	852, 898, 1763
StyI	CCWWGG	3 cut(s)	1597, 2143, 2255
TaaI	ACNGT	8 cut(s)	238, 523, 769, 1544, 1844, 1870, 2040, 2195
TaiI	ACGT	1 cut(s)	2285
TaqI	TCGA	6 cut(s)	118, 397, 515, 1385, 1897, 2175
TaqII	GACCGA	1 cut(s)	1704
TatI	WGTACW	5 cut(s)	483, 696, 1506, 1651, 2195
TfiI	GAWTC	9 cut(s)	25, 208, 319, 406, 478, 512, 531, 964, 1634
Tru1I	TTAA	9 cut(s)	141, 264, 1133, 1263, 1292, 1365, 1827, 2165, 2311
Tru9I	TTAA	9 cut(s)	141, 264, 1133, 1263, 1292, 1365, 1827, 2165, 2311
TscAI	CASTG	4 cut(s)	321, 379, 588, 616
TseFI	GTSAC	1 cut(s)	634
TseI	GCWGC	4 cut(s)	1199, 1268, 1438, 2057
Tsp45I	GTSAC	1 cut(s)	634
TspDTI	ATGAA	5 cut(s)	962, 1904, 2133, 2166, 2232
TspGWI	ACGGA	2 cut(s)	447, 847
TspRI	CASTG	4 cut(s)	321, 379, 588, 616
Van91I	CCANNNNNTGG	1 cut(s)	2261
VpaK11BI	GGWCC	7 cut(s)	161, 1022, 1319, 1544, 1687, 1989, 2106
XapI	RAATTY	6 cut(s)	381, 536, 572, 874, 1403, 1564
XbaI	TCTAGA	2 cut(s)	211, 958
XceI	RCATGY	2 cut(s)	108, 226
XmaJI	CCTAGG	1 cut(s)	1597
XmiI	GTMKAC	6 cut(s)	442, 846, 915, 1326, 1336, 1839
XspI	CTAG	6 cut(s)	212, 435, 462, 959, 1005, 1598
ZrmI	AGTACT	1 cut(s)	2197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.