Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

28191336 .. 28198340

Gene Structure 7005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g27150.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGGCAGCAAGTCAAAACCTTTCAAAGTTGTTCTTCTGCTATGTTGTTCTACTCACAGTGCTTATCTGCATTGAGCCAACCAAATCCCAGGAACAGGTGGGCACTCTTGCAGACGATGAAGTGGAAGCACTTCGTGAAATAGCTGTGCAGTTGAATAAAAAGGATTGGAATTTCAGTGATCCTTGTAGCAATATTCCGACTATTTCAATCCCGCATTCGGATGAGTACAACAACACTCTTGTCTGCAACTGCTCTTTCTCTGGCAATGTATGCCACATCCAAAGCATTATTCTTACCGGACAGGACCTTGATGGTGTGCTTCCGCCAGCGCTGTCGAAGCTACCTTACCTTAAGCAAGTTAATTTGGCCAGGAATTACCTTAGTGGTTCAATACCGCGCGAATGGAATTCTACGAAGTTGGAACTTCTGGTTCTCAGTGTGAACAACATATCAGGACCCATTCCTGGTTATTTGGGAAGCATAACTACTCTCCAATCGCTGGCCTTGGAGAGCAACTTATTTTCTGGAACTCTTCCCCAGGAATTGGGCAATTTGGTTAACCTGGAGCTTCTAAGGATTAGTGACTTAAGTGGTGAGAGTTCATCTTTTCCAAACTTATCAAGCATGACGGGCATGAATAAATTGATGTTAAGGAGCTGCAATATAACCGGAGAAATGCCTGAATATATCTCTACCATGACAAGTCTGACTGTTTTAGATCTTAGCTTCAACAGATTGGAAGGGAGTATTCCAAATTTTGCAGATATTATGGAATTGGCCACAATATATCTGACAAGCAACTTGCTAACTGGTCTTCCAGAGTGGATTAAAAATAGAGACAGTCGCTACAATATAGATCTTTCTTACAATACTTTTCCTCAGAACTCTGTCCCAAATTCTTGTCGAGAGACCTTCAATTTGTTCAGAAGTTTTTCCAGTCGGAACAATTCGCTACTTAGCAATTGCCTCTTTCCATGTTCAAAAGATCGGTACTCATTACATCTAAATTGCGGTGGAAATCAAACCACAGTCGGAAACATCAAGTACGAGGCAGATGACGCCTCAGGAGGTGCAGCAAAGTTTTTTCAGAACTCAGCAAATTGGGGATTTAGCAGTACTGGTGATTTTGCGGATGTTTGGAGCTCCAACAAAGACTATATAGCAAATAATATTTCGATGCTCAGAATGAACAACTCTGAATTGTATAAAACTGCACGACTGTCTCCTCTTTCTCTCACATATTATGCTCGTTGCTTAGCAAATGGAAATTACACTGTGAAACTGCACTTTGCGGAAATAGTTATCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGAATTTTTAACGTTTATATCCAGGATAAACTGGTTTTGGAGGATTTTGGTATTGAAAAGGAAGCACAAGGGGTTGATAAGGAAGTGATTAAGGTATTTAAAGCAGTTGTTAACGTTAAGACTTTAGAAATCCGCTTTCAGTGGGCTGGGAAAGGGACAACAAATGTTCCAAAATCAGGAACATATGGTTCTCTGATATCAGCTATCTCAGTGCAGTCTGATTTCAAGCCGCCTGATGATAGCAAAAGGAAGAAATTCATTGTGATTGGAGTTGTTTCAGCGTTATTCCTTGTTTTCGTAATTTTGGGCATTCTTTGGTTGAAAGGCTGTTTCGGAGGCAGGACAACCAGGGAACAAGATCTCATGGGATTCGATCTTCAAACTGGTTTCTTTAAATTCAAGCAACTTAAAGCTGCAACTAACAACTTCGATGCTGCAAACAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGCGAATTATTAGATGGCACATTTATTGCAGTTAAGCAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAAATAGGCATGATTTCTGCCTTACAACACCCAAATCTTGTGAAATTGTATGGATGCTGCATCGAAGGAAATCAGTTATTTTTGGTGTACGAATATATGGAGAACAATAGCCTTGCCCATGTTTTGTTTGGCCCAGAGGAAGGCCTAAAGAAACTGAACTGGAATACGAGGCATAAAATATGTCTTGGCATTGCAAGAGGTCTGGCTTTCCTGCATGAGGAGTCGACACTGAAAATTGTTCATAGAGACATCAAAACAACCAATGTACTGCTTGACCGAGACCTTAACCCTAAGATATCCGACTTTGGTTTGGCTAAGCTGGACGAAGAGGAGAAGACCCATATTAGCACCAGAGTCGCTGGAACTATAGGATACATGGCACCAGAATATGCGTTATGGGGTTATTTGAGTGACAAAGCAGATGTTTACAGTTTTGGGGTCGTTGCATTGGAACTCATCTCTGGAAAAAACAACGTCAAATATCGTCCAAATGAGAATTTTGTATGCCTTCTTGATTGGGCCCTTGTTTTGCATCAAGATGGAAATCTGATGGAGCTGGTGGATCGAAAGTTGGGGTCTGAGTTCAATAAGGAAGAGGCATTGAGAATGATAAAGGTGGCTGTACTATGTGTCAATTCATCACCGGCACTAAGACCTACGATGTCTGCAGTAGTGAGCATGCTTGAAGGCCAAACTCCTGTTCGCGAGGTGAAGATAAACCCGAGTATTTATGGTGACGAGTTGAGGTTTAGGGCCTTCACCGAGGACTCTGATACTGCTTCTGTACAGAGCACGCAAAGCTTACTGTATTCACCCGATGCAAAACGGACCCCCTATACCTCATCGTCTGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

917

Amino Acids

101.84

Weight (kDa)

6.22

Isoelectric Point (pI)

35.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2275
AccB7I	CCANNNNNTGG	2 cut(s)	499, 544
AccI	GTMKAC	1 cut(s)	2120
AccII	CGCG	3 cut(s)	397, 399, 2601
AciI	CCGC	8 cut(s)	212, 323, 395, 1011, 1130, 1292, 1471, 1568
AclI	AACGTT	2 cut(s)	1350, 1452
AclWI	GGATC	2 cut(s)	173, 2466
AcoI	YGGCCR	2 cut(s)	366, 777
AcsI	RAATTY	9 cut(s)	169, 406, 754, 895, 1341, 1592, 1733, 1886, 2392
AcyI	GRCGYC	1 cut(s)	1059
AdeI	CACNNNGTG	1 cut(s)	134
AfaI	GTAC	8 cut(s)	227, 992, 1046, 1117, 1985, 2163, 2520, 2682
AfeI	AGCGCT	1 cut(s)	330
AfiI	CCNNNNNNNGG	8 cut(s)	94, 217, 464, 499, 544, 1514, 2036, 2113
AflII	CTTAAG	2 cut(s)	350, 586
AhdI	GACNNNNNGTC	1 cut(s)	1315
AjnI	CCWGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
AjuI	GAANNNNNNNTTGG	6 cut(s)	273, 305, 1782, 1814, 2580, 2612
Alw21I	GWGCWC	2 cut(s)	1145, 2690
Alw26I	GTCTC	6 cut(s)	831, 902, 1227, 1302, 2136, 2169
AlwI	GGATC	2 cut(s)	173, 2466
Ama87I	CYCGRG	1 cut(s)	2617
Aor51HI	AGCGCT	1 cut(s)	330
AoxI	GGCC	8 cut(s)	366, 501, 777, 2026, 2038, 2415, 2584, 2649
ApaI	GGGCCC	1 cut(s)	2419
ApeKI	GCWGC	6 cut(s)	5, 657, 1073, 1751, 1772, 1953
ApoI	RAATTY	9 cut(s)	169, 406, 754, 895, 1341, 1592, 1733, 1886, 2392
ArsI	GACNNNNNNTTYG	2 cut(s)	901, 933
Asp700I	GAANNNNTTC	3 cut(s)	129, 931, 1592
AspLEI	GCGC	2 cut(s)	331, 399
AspS9I	GGNCC	7 cut(s)	304, 455, 2027, 2415, 2416, 2649, 2724
AsuHPI	GGTGA	7 cut(s)	605, 1133, 2529, 2617, 2642, 2647, 2700
AvaI	CYCGRG	1 cut(s)	2617
AvaII	GGWCC	3 cut(s)	304, 455, 2724
AxyI	CCTNAGG	1 cut(s)	1063
BaeGI	GKGCMC	2 cut(s)	104, 2419
BalI	TGGCCA	2 cut(s)	368, 779
BanI	GGYRCC	1 cut(s)	2275
BanII	GRGCYC	2 cut(s)	1145, 2419
BarI	GAAGNNNNNNTAC	4 cut(s)	329, 361, 469, 501
BbsI	GAAGAC	3 cut(s)	806, 1342, 2237
Bbv12I	GWGCWC	2 cut(s)	1145, 2690
BbvI	GCAGC	6 cut(s)	17, 644, 1085, 1738, 1759, 1940
BccI	CCATC	4 cut(s)	305, 1823, 2429, 2440
BcgI	CGANNNNNNTGC	4 cut(s)	1862, 1896, 2233, 2267
BciT130I	CCWGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
BciVI	GTATCC	1 cut(s)	2261
BcoDI	GTCTC	6 cut(s)	831, 902, 1227, 1302, 2136, 2169
BfaI	CTAG	1 cut(s)	2749
BfmI	CTRYAG	2 cut(s)	2262, 2562
BfoI	RGCGCY	1 cut(s)	332
BfrI	CTTAAG	2 cut(s)	350, 586
BfuI	GTATCC	1 cut(s)	2261
BglII	AGATCT	3 cut(s)	718, 856, 1696
BisI	GCNGC	7 cut(s)	6, 658, 1074, 1568, 1752, 1773, 1954
BlpI	GCTNAGC	2 cut(s)	1255, 2211
BlsI	GCNGC	7 cut(s)	7, 659, 1075, 1569, 1753, 1774, 1955
BmcAI	AGTACT	1 cut(s)	1117
Bme1390I	CCNGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
Bme18I	GGWCC	3 cut(s)	304, 455, 2724
BmeRI	GACNNNNNGTC	1 cut(s)	1315
BmeT110I	CYCGRG	1 cut(s)	2617
BmgT120I	GGNCC	7 cut(s)	304, 455, 2027, 2415, 2416, 2649, 2724
BmiI	GGNNCC	4 cut(s)	457, 2277, 2417, 2726
BmrFI	CCNGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
BmsI	GCATC	6 cut(s)	1167, 1759, 1940, 1965, 2437, 2704
BpiI	GAAGAC	3 cut(s)	806, 1342, 2237
BpmI	CTGGAG	1 cut(s)	584
Bpu1102I	GCTNAGC	2 cut(s)	1255, 2211
BsaBI	GATNNNNATC	1 cut(s)	2439
BsaHI	GRCGYC	1 cut(s)	1059
BsaI	GGTCTC	2 cut(s)	902, 2169
BsaJI	CCNNGG	5 cut(s)	87, 504, 537, 1686, 2658
BsaWI	WCCGGW	2 cut(s)	296, 668
Bsc4I	CCNNNNNNNGG	8 cut(s)	94, 217, 464, 499, 544, 1514, 2036, 2113
Bse118I	RCCGGY	1 cut(s)	2539
Bse1I	ACTGG	6 cut(s)	814, 936, 1123, 1374, 1726, 2060
Bse21I	CCTNAGG	1 cut(s)	1063
Bse3DI	GCAATG	2 cut(s)	271, 2085
Bse8I	GATNNNNATC	1 cut(s)	2439
BseBI	CCWGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
BseDI	CCNNGG	5 cut(s)	87, 504, 537, 1686, 2658
BseGI	GGATG	4 cut(s)	226, 276, 1138, 1955
BseJI	GATNNNNATC	1 cut(s)	2439
BseLI	CCNNNNNNNGG	8 cut(s)	94, 217, 464, 499, 544, 1514, 2036, 2113
BseMI	GCAATG	2 cut(s)	271, 2085
BseMII	CTCAG	7 cut(s)	448, 893, 1077, 1107, 1195, 1560, 2466
BseNI	ACTGG	6 cut(s)	814, 936, 1123, 1374, 1726, 2060
BseRI	GAGGAG	3 cut(s)	1215, 2129, 2240
BseSI	GKGCMC	2 cut(s)	104, 2419
BseXI	GCAGC	6 cut(s)	17, 644, 1085, 1738, 1759, 1940
BseYI	CCCAGC	1 cut(s)	1484
BsgI	GTGCAG	5 cut(s)	167, 1092, 1197, 1268, 1571
Bsh1236I	CGCG	3 cut(s)	397, 399, 2601
BshFI	GGCC	8 cut(s)	368, 503, 779, 2028, 2040, 2417, 2586, 2651
BshNI	GGYRCC	1 cut(s)	2275
BsiHKAI	GWGCWC	2 cut(s)	1145, 2690
BsiHKCI	CYCGRG	1 cut(s)	2617
BsiSI	CCGG	3 cut(s)	297, 669, 2540
BslFI	GGGAC	2 cut(s)	875, 1507
BslI	CCNNNNNNNGG	8 cut(s)	94, 217, 464, 499, 544, 1514, 2036, 2113
BsmAI	GTCTC	6 cut(s)	831, 902, 1227, 1302, 2136, 2169
BsmFI	GGGAC	2 cut(s)	875, 1507
BsmI	GAATGC	2 cut(s)	214, 1647
BsnI	GGCC	8 cut(s)	368, 503, 779, 2028, 2040, 2417, 2586, 2651
Bso31I	GGTCTC	2 cut(s)	902, 2169
BsoBI	CYCGRG	1 cut(s)	2617
Bsp120I	GGGCCC	1 cut(s)	2415
Bsp1286I	GDGCHC	4 cut(s)	104, 1145, 2419, 2690
Bsp1407I	TGTACA	1 cut(s)	2680
Bsp143I	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
Bsp1720I	GCTNAGC	2 cut(s)	1255, 2211
Bsp68I	TCGCGA	1 cut(s)	2601
BspACI	CCGC	8 cut(s)	212, 323, 395, 1011, 1130, 1292, 1471, 1568
BspANI	GGCC	8 cut(s)	368, 503, 779, 2028, 2040, 2417, 2586, 2651
BspCNI	CTCAG	7 cut(s)	447, 892, 1076, 1106, 1194, 1559, 2467
BspFNI	CGCG	3 cut(s)	397, 399, 2601
BspLI	GGNNCC	4 cut(s)	457, 2277, 2417, 2726
BspMAI	CTGCAG	1 cut(s)	2566
BspPI	GGATC	2 cut(s)	173, 2466
BspT107I	GGYRCC	1 cut(s)	2275
BspTI	CTTAAG	2 cut(s)	350, 586
BspTNI	GGTCTC	2 cut(s)	902, 2169
BsrDI	GCAATG	2 cut(s)	271, 2085
BsrFI	RCCGGY	1 cut(s)	2539
BsrGI	TGTACA	1 cut(s)	2680
BsrI	ACTGG	6 cut(s)	814, 936, 1123, 1374, 1726, 2060
BssAI	RCCGGY	1 cut(s)	2539
BssECI	CCNNGG	5 cut(s)	87, 504, 537, 1686, 2658
BssMI	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
BssNI	GRCGYC	1 cut(s)	1059
BssT1I	CCWWGG	1 cut(s)	504
Bst2UI	CCWGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
Bst4CI	ACNGT	8 cut(s)	58, 712, 842, 1030, 1221, 1276, 2327, 2703
Bst6I	CTCTTC	3 cut(s)	537, 2217, 2484
BstACI	GRCGYC	1 cut(s)	1059
BstAFI	CTTAAG	2 cut(s)	350, 586
BstAPI	GCANNNNNTGC	1 cut(s)	270
BstAUI	TGTACA	1 cut(s)	2680
BstC8I	GCNNGC	4 cut(s)	327, 501, 2576, 2690
BstENI	CCTNNNNNAGG	1 cut(s)	2111
BstF5I	GGATG	4 cut(s)	226, 276, 1138, 1955
BstFNI	CGCG	3 cut(s)	397, 399, 2601
BstH2I	RGCGCY	1 cut(s)	332
BstHHI	GCGC	2 cut(s)	331, 399
BstKTI	GATC	7 cut(s)	181, 721, 859, 988, 1699, 1714, 2461
BstMAI	GTCTC	6 cut(s)	831, 902, 1227, 1302, 2136, 2169
BstMBI	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
BstMWI	GCNNNNNNNGC	5 cut(s)	270, 337, 630, 1058, 2694
BstNI	CCWGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
BstNSI	RCATGY	1 cut(s)	2578
BstSCI	CCNGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
BstSFI	CTRYAG	2 cut(s)	2262, 2562
BstSLI	GKGCMC	2 cut(s)	104, 2419
BstUI	CGCG	3 cut(s)	397, 399, 2601
BstV1I	GCAGC	6 cut(s)	17, 644, 1085, 1738, 1759, 1940
BstV2I	GAAGAC	3 cut(s)	806, 1342, 2237
BstX2I	RGATCY	3 cut(s)	718, 856, 1696
BstYI	RGATCY	3 cut(s)	718, 856, 1696
Bsu36I	CCTNAGG	1 cut(s)	1063
BsuI	GTATCC	1 cut(s)	2261
BsuRI	GGCC	8 cut(s)	368, 503, 779, 2028, 2040, 2417, 2586, 2651
BtsCI	GGATG	4 cut(s)	226, 276, 1138, 1955
BtsIMutI	CAGTG	7 cut(s)	63, 181, 442, 1272, 1484, 1554, 2123
BtuMI	TCGCGA	1 cut(s)	2601
Cac8I	GCNNGC	4 cut(s)	327, 501, 2576, 2690
CfoI	GCGC	2 cut(s)	331, 399
Cfr10I	RCCGGY	1 cut(s)	2539
Cfr13I	GGNCC	7 cut(s)	304, 455, 2027, 2415, 2416, 2649, 2724
CseI	GACGC	1 cut(s)	1067
Csp6I	GTAC	8 cut(s)	226, 991, 1045, 1116, 1984, 2162, 2519, 2681
CviQI	GTAC	8 cut(s)	226, 991, 1045, 1116, 1984, 2162, 2519, 2681
DpnI	GATC	7 cut(s)	180, 720, 858, 987, 1698, 1713, 2460
DpnII	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
DraI	TTTAAA	2 cut(s)	1438, 1732
DraIII	CACNNNGTG	1 cut(s)	134
DriI	GACNNNNNGTC	1 cut(s)	1315
EaeI	YGGCCR	2 cut(s)	366, 777
Eam1104I	CTCTTC	3 cut(s)	537, 2217, 2484
Eam1105I	GACNNNNNGTC	1 cut(s)	1315
EarI	CTCTTC	3 cut(s)	537, 2217, 2484
EciI	GGCGGA	1 cut(s)	312
Ecl136II	GAGCTC	1 cut(s)	1143
Eco130I	CCWWGG	1 cut(s)	504
Eco147I	AGGCCT	1 cut(s)	2040
Eco24I	GRGCYC	2 cut(s)	1145, 2419
Eco31I	GGTCTC	2 cut(s)	902, 2169
Eco32I	GATATC	2 cut(s)	1536, 2193
Eco47I	GGWCC	3 cut(s)	304, 455, 2724
Eco47III	AGCGCT	1 cut(s)	330
Eco53kI	GAGCTC	1 cut(s)	1143
Eco81I	CCTNAGG	1 cut(s)	1063
Eco88I	CYCGRG	1 cut(s)	2617
EcoICRI	GAGCTC	1 cut(s)	1143
EcoNI	CCTNNNNNAGG	1 cut(s)	2111
EcoO109I	RGGNCCY	4 cut(s)	304, 455, 2416, 2649
EcoRI	GAATTC	1 cut(s)	406
EcoRII	CCWGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
EcoRV	GATATC	2 cut(s)	1536, 2193
EcoT14I	CCWWGG	1 cut(s)	504
EcoT38I	GRGCYC	2 cut(s)	1145, 2419
ErhI	CCWWGG	1 cut(s)	504
FalI	AAGNNNNNCTT	2 cut(s)	17, 49
FaqI	GGGAC	2 cut(s)	875, 1507
FauI	CCCGC	1 cut(s)	219
FauNDI	CATATG	1 cut(s)	1522
FblI	GTMKAC	1 cut(s)	2120
Fnu4HI	GCNGC	7 cut(s)	6, 658, 1074, 1568, 1752, 1773, 1954
FokI	GGATG	4 cut(s)	233, 263, 1145, 1962
FriOI	GRGCYC	2 cut(s)	1145, 2419
Fsp4HI	GCNGC	7 cut(s)	6, 658, 1074, 1568, 1752, 1773, 1954
FspBI	CTAG	1 cut(s)	2749
GlaI	GCGC	2 cut(s)	330, 398
GluI	GCNGC	7 cut(s)	6, 658, 1074, 1568, 1752, 1773, 1954
GsaI	CCCAGC	1 cut(s)	1488
GsuI	CTGGAG	1 cut(s)	584
HaeII	RGCGCY	1 cut(s)	332
HaeIII	GGCC	8 cut(s)	368, 503, 779, 2028, 2040, 2417, 2586, 2651
HapII	CCGG	3 cut(s)	297, 669, 2540
HgaI	GACGC	1 cut(s)	1067
HhaI	GCGC	2 cut(s)	331, 399
Hin1I	GRCGYC	1 cut(s)	1059
Hin6I	GCGC	2 cut(s)	329, 397
HinP1I	GCGC	2 cut(s)	329, 397
HincII	GTYRAC	3 cut(s)	559, 1450, 2121
HindII	GTYRAC	3 cut(s)	559, 1450, 2121
HindIII	AAGCTT	2 cut(s)	1781, 2695
HinfI	GANTC	4 cut(s)	1707, 2117, 2250, 2663
HpaI	GTTAAC	2 cut(s)	559, 1450
HpaII	CCGG	3 cut(s)	297, 669, 2540
HphI	GGTGA	7 cut(s)	605, 1133, 2529, 2617, 2642, 2647, 2700
Hpy166II	GTNNAC	7 cut(s)	442, 559, 1450, 1810, 1984, 2121, 2323
Hpy8I	GTNNAC	7 cut(s)	442, 559, 1450, 1810, 1984, 2121, 2323
HpyAV	CCTTC	8 cut(s)	734, 922, 1784, 1955, 2030, 2414, 2576, 2662
HpyCH4III	ACNGT	8 cut(s)	58, 712, 842, 1030, 1221, 1276, 2327, 2703
HpyCH4IV	ACGT	3 cut(s)	1350, 1452, 2370
HpyF10VI	GCNNNNNNNGC	5 cut(s)	270, 337, 630, 1058, 2694
HpySE526I	ACGT	3 cut(s)	1350, 1452, 2370
Hsp92I	GRCGYC	1 cut(s)	1059
HspAI	GCGC	2 cut(s)	329, 397
KspAI	GTTAAC	2 cut(s)	559, 1450
Kzo9I	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
LmnI	GCTCC	6 cut(s)	565, 654, 1140, 1148, 1802, 2449
Lsp1109I	GCAGC	6 cut(s)	17, 644, 1085, 1738, 1759, 1940
LweI	GCATC	6 cut(s)	1167, 1759, 1940, 1965, 2437, 2704
MaeI	CTAG	1 cut(s)	2749
MaeII	ACGT	3 cut(s)	1350, 1452, 2370
MaeIII	GTNAC	3 cut(s)	581, 2306, 2630
MalI	GATC	7 cut(s)	180, 720, 858, 987, 1698, 1713, 2460
MboI	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
MfeI	CAATTG	1 cut(s)	961
MflI	RGATCY	3 cut(s)	718, 856, 1696
MhlI	GDGCHC	4 cut(s)	104, 1145, 2419, 2690
MlsI	TGGCCA	2 cut(s)	368, 779
MluNI	TGGCCA	2 cut(s)	368, 779
MlyI	GAGTC	3 cut(s)	2126, 2259, 2657
MmeI	TCCRAC	7 cut(s)	221, 399, 920, 1012, 1170, 1312, 2220
Mox20I	TGGCCA	2 cut(s)	368, 779
MroXI	GAANNNNTTC	3 cut(s)	129, 931, 1592
MscI	TGGCCA	2 cut(s)	368, 779
MslI	CAYNNNNRTG	2 cut(s)	219, 2433
Msp20I	TGGCCA	2 cut(s)	368, 779
MspCI	CTTAAG	2 cut(s)	350, 586
MspI	CCGG	3 cut(s)	297, 669, 2540
MspR9I	CCNGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
MunI	CAATTG	1 cut(s)	961
Mva1269I	GAATGC	2 cut(s)	214, 1647
MvaI	CCWGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
MvnI	CGCG	3 cut(s)	397, 399, 2601
MwoI	GCNNNNNNNGC	5 cut(s)	270, 337, 630, 1058, 2694
NdeI	CATATG	1 cut(s)	1522
NdeII	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
NlaIV	GGNNCC	4 cut(s)	457, 2277, 2417, 2726
NmuCI	GTSAC	3 cut(s)	581, 2306, 2630
NruI	TCGCGA	1 cut(s)	2601
NspI	RCATGY	1 cut(s)	2578
PaeI	GCATGC	1 cut(s)	2578
PceI	AGGCCT	1 cut(s)	2040
PctI	GAATGC	2 cut(s)	214, 1647
PdmI	GAANNNNTTC	3 cut(s)	129, 931, 1592
PfeI	GAWTC	1 cut(s)	1707
PflMI	CCANNNNNTGG	2 cut(s)	499, 544
PfoI	TCCNGGA	1 cut(s)	1359
PkrI	GCNGC	7 cut(s)	7, 659, 1075, 1569, 1753, 1774, 1955
PleI	GAGTC	3 cut(s)	2125, 2258, 2657
PpsI	GAGTC	3 cut(s)	2125, 2258, 2657
PpuMI	RGGWCCY	2 cut(s)	304, 455
Psp124BI	GAGCTC	1 cut(s)	1145
Psp1406I	AACGTT	2 cut(s)	1350, 1452
Psp5II	RGGWCCY	2 cut(s)	304, 455
Psp6I	CCWGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
PspFI	CCCAGC	1 cut(s)	1484
PspGI	CCWGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
PspN4I	GGNNCC	4 cut(s)	457, 2277, 2417, 2726
PspOMI	GGGCCC	1 cut(s)	2415
PspPI	GGNCC	7 cut(s)	304, 455, 2027, 2415, 2416, 2649, 2724
PspPPI	RGGWCCY	2 cut(s)	304, 455
PstI	CTGCAG	1 cut(s)	2566
PsuI	RGATCY	3 cut(s)	718, 856, 1696
RruI	TCGCGA	1 cut(s)	2601
RsaI	GTAC	8 cut(s)	227, 992, 1046, 1117, 1985, 2163, 2520, 2682
RsaNI	GTAC	8 cut(s)	226, 991, 1045, 1116, 1984, 2162, 2519, 2681
RseI	CAYNNNNRTG	2 cut(s)	219, 2433
SacI	GAGCTC	1 cut(s)	1145
SalI	GTCGAC	1 cut(s)	2119
SatI	GCNGC	7 cut(s)	6, 658, 1074, 1568, 1752, 1773, 1954
Sau3AI	GATC	7 cut(s)	178, 718, 856, 985, 1696, 1711, 2458
Sau96I	GGNCC	7 cut(s)	304, 455, 2027, 2415, 2416, 2649, 2724
ScaI	AGTACT	1 cut(s)	1117
SchI	GAGTC	3 cut(s)	2126, 2259, 2657
ScrFI	CCNGG	7 cut(s)	89, 370, 465, 539, 563, 1361, 1687
SduI	GDGCHC	4 cut(s)	104, 1145, 2419, 2690
SfaNI	GCATC	6 cut(s)	1167, 1759, 1940, 1965, 2437, 2704
SfcI	CTRYAG	2 cut(s)	2262, 2562
SinI	GGWCC	3 cut(s)	304, 455, 2724
SmiMI	CAYNNNNRTG	2 cut(s)	219, 2433
SmlI	CTYRAG	2 cut(s)	350, 586
SmoI	CTYRAG	2 cut(s)	350, 586
SphI	GCATGC	1 cut(s)	2578
SseBI	AGGCCT	1 cut(s)	2040
SsiI	CCGC	8 cut(s)	212, 323, 395, 1011, 1130, 1292, 1471, 1568
SspI	AATATT	2 cut(s)	193, 1171
SspMI	CTAG	1 cut(s)	2749
SstI	GAGCTC	1 cut(s)	1145
StuI	AGGCCT	1 cut(s)	2040
StyD4I	CCNGG	7 cut(s)	87, 368, 463, 537, 561, 1359, 1685
StyI	CCWWGG	1 cut(s)	504
TaaI	ACNGT	8 cut(s)	58, 712, 842, 1030, 1221, 1276, 2327, 2703
TaiI	ACGT	3 cut(s)	1353, 1455, 2373
TaqI	TCGA	8 cut(s)	335, 904, 1175, 1710, 1767, 1959, 2120, 2461
TaqII	GACCGA	1 cut(s)	2187
TatI	WGTACW	5 cut(s)	225, 1115, 2161, 2518, 2680
TauI	GCSGC	1 cut(s)	1570
TfiI	GAWTC	1 cut(s)	1707
TscAI	CASTG	7 cut(s)	63, 181, 442, 1279, 1484, 1554, 2130
TseFI	GTSAC	3 cut(s)	581, 2306, 2630
TseI	GCWGC	6 cut(s)	5, 657, 1073, 1751, 1772, 1953
Tsp45I	GTSAC	3 cut(s)	581, 2306, 2630
TspDTI	ATGAA	8 cut(s)	132, 591, 650, 1202, 1585, 1911, 2126, 2523
TspGWI	ACGGA	1 cut(s)	2737
TspRI	CASTG	7 cut(s)	63, 181, 442, 1279, 1484, 1554, 2130
Van91I	CCANNNNNTGG	2 cut(s)	499, 544
Vha464I	CTTAAG	2 cut(s)	350, 586
VpaK11BI	GGWCC	3 cut(s)	304, 455, 2724
XagI	CCTNNNNNAGG	1 cut(s)	2111
XapI	RAATTY	9 cut(s)	169, 406, 754, 895, 1341, 1592, 1733, 1886, 2392
XceI	RCATGY	1 cut(s)	2578
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2021
XmiI	GTMKAC	1 cut(s)	2120
XmnI	GAANNNNTTC	3 cut(s)	129, 931, 1592
XspI	CTAG	1 cut(s)	2749
ZrmI	AGTACT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.