Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000217.1

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

37520 .. 43560

Gene Structure 6041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000217.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

atggtaagaattaacaacccagaggagatggtcatcttcttcgtagtggtcatttgcatggcaccagtcatatttgaagcacaggccatgactcttccagctgatgaggtgcaagcccttcatgaaattgctgagcaactgaacaaaaaggactggaatttgagcgacccatgtagaaatattccaactttctcaatgccacatacggatcagtacatgaacaccctcttctgcaactgttctttctctggcaatgtgtgccatgtccaaaccatttttcttgtgggtcaggacctggatggtgtgcttccaccatcactggtgaagctgccttacctcaaggaactgtatgtttcaggctccatagctttaatttccactatatgtttagcttttttgattttaccacctaaaaaactgtttgttcttgctcccagtaatctgggtcagaattaccttagtggctcaattccaccagaatggggctctaccaagttggaatttcttgttctcagtgtgaacaacttatcaggacctatccctgcctatttggggaacataactactctccgagctttggccttggaaagcaacttattttctggaagtattccaccggagatgggaagattgattaacgtggaagtcctctaccttcgagctaacaatctcactggacagttgcctgtggctctcactaatatgaccaaattaaaaacactagagatgcaagcgagtggctttgaagggcccattccttctactctttctaccttaagtaatatgacatacttagtaatcagtgacttaagcggagagagctcaagttttccaaacttgtcgaacatgaaaaacatgcagaaattgatgttaaggagctgcaatataacaggatcaattccagaatatatgtctaacatgacaagcctgcaagttttagatcttagcttcaacagattgaaagggagtatcccaaatcttgacaagttattaggattggccacaatatatctgacaagtaactggcttactgggcttccggagtggatcaaaaatagatctagccgctacactggtgattatgggattatgaattttgaccaagcctacatagcaaacaatgtttccatactcaaaatgaacaactcggaattgtacagaactgcccgcctttcttttctttcactcacatattatgctcgttgcttagcaaatggaaattacactgtgaaactacactttgcagaaatagttctcagagacaacaggtcttattatggtgttggaagacgattttttgatgtctatattcaggaaaaactggtattgaaggattttaatattaaaaaggaagcacagggggttgataaggaagtgattaaagtatttaaagcagttgtcaatgttagcactttagagatccgtttttattgggctgggaaagggacaactaatgccccaaagagagggacatatggttcacttatatcggctatctcagttgagtctgattttaagccacctggtgatagcaacaggaaaatattcatagcggttggagttgcattattcttatgcctcatcttcatgatttttggcattctttggttaagaagctgctttggaggcaggacctctagggaacaagagctgaaaggattggatctgcaaactggactctttagattcaaacaaatcaaagctgccactaacaactttgatgctgcaaacaagcttggggaaggtggctttggaattgtttacaagggggaattattagatggtactactattgctgttaagcaactttcatcaaaatcaaaacaaggaaatcgtgagtttgtgaatgaaatagggatgatttctggattgcaacatccaaatcttgttagattgtatggatgttgcatcgaaggaaatcagttgttgctggtatatgaatacatggagaacaatagtcttgcacattcattgtttggtccacaagaaggtatactgaaactggactggcctaagaggcaaaaaatatgtattggcattgcaagagggctagctttcctgcatgaggaatcgacactgaaaattgttcatagagatatcaaaatgactaatatactgctagatagagacctaaatcctaaaatctctgactttggtttggccaagctagacgaagaggagaaaacgcatattagcaccagagtagctggaactataggatacatggcgccagaatatgcactatggggttatttaactgacaaagtagatgtttacagttttggagttgttgcattagagctcgtatctggaaaaaacaacatcaaatatcgaccaaatgagaattatgtatgccttctagattgggcccttgttttgcaacaaaaagaaaacctgatggagctagtggatccaaagttgggatccaagttcaacaaggaagaggcaatgagaatgattaaagtagctctactatgcaccaatccatcaccagcactgagacctacaatgtctgcagcactaagtatgcttgaaggccgagttgttattcatgaatcaagtagaaatctgagtatgtatggtgatgaactggggtttaaggtcctaagagacgactataatgatctgaatattcaacagagcccaagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

883

Amino Acids

98.73

Weight (kDa)

8.4

Isoelectric Point (pI)

36.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	61, 2227
AccI	GTMKAC	1 cut(s)	1993
AccIII	TCCGGA	1 cut(s)	1039
AciI	CCGC	4 cut(s)	813, 1066, 1168, 1553
AclWI	GGATC	9 cut(s)	216, 901, 1055, 1414, 1671, 2405, 2418, 2418, 2431
AcoI	YGGCCR	2 cut(s)	999, 2160
AcsI	RAATTY	3 cut(s)	157, 500, 1093
AcyI	GRCGYC	1 cut(s)	2228
AdeI	CACNNNGTG	1 cut(s)	1526
AfaI	GTAC	3 cut(s)	215, 1157, 1786
AfiI	CCNNNNNNNGG	8 cut(s)	482, 552, 577, 623, 1466, 1988, 2065, 2420
AflII	CTTAAG	2 cut(s)	775, 808
AgsI	TTSAA	9 cut(s)	77, 746, 952, 961, 1330, 1690, 2434, 2534, 2636
AhdI	GACNNNNNGTC	1 cut(s)	1267
AjnI	CCWGG	2 cut(s)	294, 1522
AjuI	GAANNNNNNNTTGG	4 cut(s)	261, 293, 1734, 1766
AloI	GAACNNNNNNTCC	2 cut(s)	1462, 1494
Alw21I	GWGCWC	2 cut(s)	824, 2304
Alw26I	GTCTC	4 cut(s)	1254, 2121, 2494, 2604
AlwI	GGATC	9 cut(s)	216, 901, 1055, 1414, 1671, 2405, 2418, 2418, 2431
AlwNI	CAGNNNCTG	1 cut(s)	295
Aor13HI	TCCGGA	1 cut(s)	1039
AoxI	GGCC	8 cut(s)	84, 579, 749, 999, 2009, 2160, 2367, 2536
ApaI	GGGCCC	2 cut(s)	753, 2371
ApeKI	GCWGC	6 cut(s)	328, 879, 1617, 1703, 1724, 2516
ApoI	RAATTY	3 cut(s)	157, 500, 1093
Asp700I	GAANNNNTTC	2 cut(s)	1251, 1544
AspLEI	GCGC	1 cut(s)	2230
AspS9I	GGNCC	9 cut(s)	292, 533, 749, 750, 1632, 1979, 2367, 2368, 2602
AsuHPI	GGTGA	5 cut(s)	334, 1088, 1538, 2481, 2594
AsuNHI	GCTAGC	1 cut(s)	2050
AvaII	GGWCC	5 cut(s)	292, 533, 1632, 1979, 2602
BaeGI	GKGCMC	2 cut(s)	753, 2371
BalI	TGGCCA	2 cut(s)	1001, 2162
BamHI	GGATCC	2 cut(s)	2410, 2423
BanI	GGYRCC	2 cut(s)	61, 2227
BanII	GRGCYC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
BarI	GAAGNNNNNNTAC	2 cut(s)	317, 349
BbsI	GAAGAC	1 cut(s)	1294
Bbv12I	GWGCWC	2 cut(s)	824, 2304
BbvI	GCAGC	6 cut(s)	315, 866, 1604, 1690, 1711, 2528
BccI	CCATC	7 cut(s)	22, 293, 322, 616, 1775, 2392, 2494
BciT130I	CCWGG	2 cut(s)	296, 1524
BciVI	GTATCC	2 cut(s)	980, 2213
BcoDI	GTCTC	4 cut(s)	1254, 2121, 2494, 2604
BfaI	CTAG	8 cut(s)	722, 1062, 1638, 2051, 2120, 2168, 2360, 2405
BfmI	CTRYAG	2 cut(s)	2214, 2514
BfoI	RGCGCY	1 cut(s)	2231
BfrI	CTTAAG	2 cut(s)	775, 808
BfuI	GTATCC	2 cut(s)	980, 2213
BglI	GCCNNNNNGGC	1 cut(s)	2017
BglII	AGATCT	2 cut(s)	940, 1058
BisI	GCNGC	7 cut(s)	329, 880, 1066, 1618, 1704, 1725, 2517
BlpI	GCTNAGC	2 cut(s)	132, 1207
BlsI	GCNGC	7 cut(s)	330, 881, 1067, 1619, 1705, 1726, 2518
Bme1390I	CCNGG	2 cut(s)	296, 1524
Bme18I	GGWCC	5 cut(s)	292, 533, 1632, 1979, 2602
BmeRI	GACNNNNNGTC	1 cut(s)	1267
BmgT120I	GGNCC	9 cut(s)	292, 533, 749, 750, 1632, 1979, 2367, 2368, 2602
BmiI	GGNNCC	7 cut(s)	63, 361, 751, 2229, 2369, 2412, 2425
BmrFI	CCNGG	2 cut(s)	296, 1524
BmrI	ACTGGG	3 cut(s)	429, 1041, 2600
BmsI	GCATC	3 cut(s)	717, 1711, 1917
BmtI	GCTAGC	1 cut(s)	2054
BmuI	ACTGGG	3 cut(s)	429, 1041, 2600
BpiI	GAAGAC	1 cut(s)	1294
Bpu1102I	GCTNAGC	2 cut(s)	132, 1207
BpuEI	CTTGAG	2 cut(s)	323, 808
BsaBI	GATNNNNATC	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	2228
BsaI	GGTCTC	2 cut(s)	2121, 2494
BsaJI	CCNNGG	1 cut(s)	582
BsaWI	WCCGGW	2 cut(s)	616, 1039
Bsc4I	CCNNNNNNNGG	8 cut(s)	482, 552, 577, 623, 1466, 1988, 2065, 2420
Bse3DI	GCAATG	3 cut(s)	259, 2037, 2454
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	1 cut(s)	1039
BseBI	CCWGG	2 cut(s)	296, 1524
BseDI	CCNNGG	1 cut(s)	582
BseGI	GGATG	4 cut(s)	304, 1863, 1876, 1907
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	8 cut(s)	482, 552, 577, 623, 1466, 1988, 2065, 2420
BseMI	GCAATG	3 cut(s)	259, 2037, 2454
BseMII	CTCAG	6 cut(s)	123, 526, 1270, 1512, 2489, 2561
BseRI	GAGGAG	2 cut(s)	38, 2192
BseSI	GKGCMC	2 cut(s)	753, 2371
BseXI	GCAGC	6 cut(s)	315, 866, 1604, 1690, 1711, 2528
BseYI	CCCAGC	1 cut(s)	1436
BshFI	GGCC	8 cut(s)	86, 581, 751, 1001, 2011, 2162, 2369, 2538
BshNI	GGYRCC	2 cut(s)	61, 2227
BsiHKAI	GWGCWC	2 cut(s)	824, 2304
BsiSI	CCGG	2 cut(s)	617, 1040
BslFI	GGGAC	2 cut(s)	1459, 1483
BslI	CCNNNNNNNGG	8 cut(s)	482, 552, 577, 623, 1466, 1988, 2065, 2420
BsmAI	GTCTC	4 cut(s)	1254, 2121, 2494, 2604
BsmBI	CGTCTC	1 cut(s)	2604
BsmFI	GGGAC	2 cut(s)	1459, 1483
BsmI	GAATGC	1 cut(s)	1599
BsnI	GGCC	8 cut(s)	86, 581, 751, 1001, 2011, 2162, 2369, 2538
Bso31I	GGTCTC	2 cut(s)	2121, 2494
Bsp120I	GGGCCC	2 cut(s)	749, 2367
Bsp1286I	GDGCHC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
Bsp13I	TCCGGA	1 cut(s)	1039
Bsp1407I	TGTACA	1 cut(s)	1155
Bsp1720I	GCTNAGC	2 cut(s)	132, 1207
BspACI	CCGC	4 cut(s)	813, 1066, 1168, 1553
BspANI	GGCC	8 cut(s)	86, 581, 751, 1001, 2011, 2162, 2369, 2538
BspCNI	CTCAG	6 cut(s)	124, 525, 1269, 1511, 2490, 2562
BspEI	TCCGGA	1 cut(s)	1039
BspHI	TCATGA	3 cut(s)	121, 1587, 2551
BspLI	GGNNCC	7 cut(s)	63, 361, 751, 2229, 2369, 2412, 2425
BspMAI	CTGCAG	1 cut(s)	2518
BspOI	GCTAGC	1 cut(s)	2054
BspPI	GGATC	9 cut(s)	216, 901, 1055, 1414, 1671, 2405, 2418, 2418, 2431
BspT107I	GGYRCC	2 cut(s)	61, 2227
BspTI	CTTAAG	2 cut(s)	775, 808
BspTNI	GGTCTC	2 cut(s)	2121, 2494
BsrDI	GCAATG	3 cut(s)	259, 2037, 2454
BsrGI	TGTACA	1 cut(s)	1155
BssECI	CCNNGG	1 cut(s)	582
BssNAI	GTATAC	1 cut(s)	1994
BssNI	GRCGYC	1 cut(s)	2228
BssT1I	CCWWGG	1 cut(s)	582
Bst1107I	GTATAC	1 cut(s)	1994
Bst2UI	CCWGG	2 cut(s)	296, 1524
Bst4CI	ACNGT	6 cut(s)	239, 348, 420, 681, 1228, 2279
Bst6I	CTCTTC	4 cut(s)	99, 233, 2169, 2436
BstACI	GRCGYC	1 cut(s)	2228
BstAFI	CTTAAG	2 cut(s)	775, 808
BstAPI	GCANNNNNTGC	1 cut(s)	258
BstAUI	TGTACA	1 cut(s)	1155
BstC8I	GCNNGC	5 cut(s)	114, 732, 929, 1168, 2052
BstENI	CCTNNNNNAGG	1 cut(s)	2063
BstF5I	GGATG	4 cut(s)	304, 1863, 1876, 1907
BstH2I	RGCGCY	1 cut(s)	2231
BstHHI	GCGC	1 cut(s)	2230
BstMAI	GTCTC	4 cut(s)	1254, 2121, 2494, 2604
BstMWI	GCNNNNNNNGC	6 cut(s)	258, 819, 1033, 1112, 1626, 2017
BstNI	CCWGG	2 cut(s)	296, 1524
BstNSI	RCATGY	1 cut(s)	859
BstSCI	CCNGG	2 cut(s)	294, 1522
BstSFI	CTRYAG	2 cut(s)	2214, 2514
BstSLI	GKGCMC	2 cut(s)	753, 2371
BstV1I	GCAGC	6 cut(s)	315, 866, 1604, 1690, 1711, 2528
BstV2I	GAAGAC	1 cut(s)	1294
BstX2I	RGATCY	6 cut(s)	940, 1058, 1419, 1663, 2410, 2423
BstXI	CCANNNNNNTGG	2 cut(s)	442, 480
BstYI	RGATCY	6 cut(s)	940, 1058, 1419, 1663, 2410, 2423
BstZ17I	GTATAC	1 cut(s)	1994
BsuI	GTATCC	2 cut(s)	980, 2213
BsuRI	GGCC	8 cut(s)	86, 581, 751, 1001, 2011, 2162, 2369, 2538
BtsCI	GGATG	4 cut(s)	304, 1863, 1876, 1907
BtsIMutI	CAGTG	8 cut(s)	317, 520, 672, 808, 1071, 1224, 2075, 2495
Cac8I	GCNNGC	5 cut(s)	114, 732, 929, 1168, 2052
CaiI	CAGNNNCTG	1 cut(s)	295
CciI	TCATGA	3 cut(s)	121, 1587, 2551
CfoI	GCGC	1 cut(s)	2230
Cfr13I	GGNCC	9 cut(s)	292, 533, 749, 750, 1632, 1979, 2367, 2368, 2602
CsiI	ACCWGGT	1 cut(s)	1522
Csp6I	GTAC	3 cut(s)	214, 1156, 1785
CviQI	GTAC	3 cut(s)	214, 1156, 1785
DinI	GGCGCC	1 cut(s)	2229
DraI	TTTAAA	1 cut(s)	1390
DraIII	CACNNNGTG	1 cut(s)	1526
DriI	GACNNNNNGTC	1 cut(s)	1267
EaeI	YGGCCR	2 cut(s)	999, 2160
Eam1104I	CTCTTC	4 cut(s)	99, 233, 2169, 2436
Eam1105I	GACNNNNNGTC	1 cut(s)	1267
EarI	CTCTTC	4 cut(s)	99, 233, 2169, 2436
Ecl136II	GAGCTC	2 cut(s)	822, 2302
Eco130I	CCWWGG	1 cut(s)	582
Eco24I	GRGCYC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
Eco31I	GGTCTC	2 cut(s)	2121, 2494
Eco32I	GATATC	1 cut(s)	2098
Eco47I	GGWCC	5 cut(s)	292, 533, 1632, 1979, 2602
Eco53kI	GAGCTC	2 cut(s)	822, 2302
EcoICRI	GAGCTC	2 cut(s)	822, 2302
EcoNI	CCTNNNNNAGG	1 cut(s)	2063
EcoO109I	RGGNCCY	6 cut(s)	292, 533, 749, 1632, 2368, 2602
EcoRII	CCWGG	2 cut(s)	294, 1522
EcoRV	GATATC	1 cut(s)	2098
EcoT14I	CCWWGG	1 cut(s)	582
EcoT38I	GRGCYC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
EgeI	GGCGCC	1 cut(s)	2229
EheI	GGCGCC	1 cut(s)	2229
ErhI	CCWWGG	1 cut(s)	582
Esp3I	CGTCTC	1 cut(s)	2604
FaqI	GGGAC	2 cut(s)	1459, 1483
FauI	CCCGC	1 cut(s)	1175
FauNDI	CATATG	1 cut(s)	1474
FblI	GTMKAC	1 cut(s)	1993
Fnu4HI	GCNGC	7 cut(s)	329, 880, 1066, 1618, 1704, 1725, 2517
FokI	GGATG	4 cut(s)	311, 1863, 1870, 1914
FriOI	GRGCYC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
Fsp4HI	GCNGC	7 cut(s)	329, 880, 1066, 1618, 1704, 1725, 2517
FspBI	CTAG	8 cut(s)	722, 1062, 1638, 2051, 2120, 2168, 2360, 2405
GlaI	GCGC	1 cut(s)	2229
GluI	GCNGC	7 cut(s)	329, 880, 1066, 1618, 1704, 1725, 2517
GsaI	CCCAGC	1 cut(s)	1440
HaeII	RGCGCY	1 cut(s)	2231
HaeIII	GGCC	8 cut(s)	86, 581, 751, 1001, 2011, 2162, 2369, 2538
HapII	CCGG	2 cut(s)	617, 1040
HhaI	GCGC	1 cut(s)	2230
Hin1I	GRCGYC	1 cut(s)	2228
Hin6I	GCGC	1 cut(s)	2228
HinP1I	GCGC	1 cut(s)	2228
HindIII	AAGCTT	1 cut(s)	1733
HinfI	GANTC	6 cut(s)	91, 1505, 1677, 1686, 2069, 2555
HpaII	CCGG	2 cut(s)	617, 1040
HphI	GGTGA	5 cut(s)	334, 1088, 1538, 2481, 2594
Hpy166II	GTNNAC	6 cut(s)	520, 1481, 1762, 1982, 1994, 2275
Hpy188I	TCNGA	9 cut(s)	450, 572, 1014, 1150, 1259, 1510, 2149, 2571, 2628
Hpy8I	GTNNAC	6 cut(s)	520, 1481, 1762, 1982, 1994, 2275
HpyCH4III	ACNGT	6 cut(s)	239, 348, 420, 681, 1228, 2279
HpyCH4IV	ACGT	1 cut(s)	639
HpyF10VI	GCNNNNNNNGC	6 cut(s)	258, 819, 1033, 1112, 1626, 2017
HpySE526I	ACGT	1 cut(s)	639
Hsp92I	GRCGYC	1 cut(s)	2228
HspAI	GCGC	1 cut(s)	2228
KasI	GGCGCC	1 cut(s)	2227
Kpn2I	TCCGGA	1 cut(s)	1039
LmnI	GCTCC	4 cut(s)	365, 436, 876, 2401
Lsp1109I	GCAGC	6 cut(s)	315, 866, 1604, 1690, 1711, 2528
LweI	GCATC	3 cut(s)	717, 1711, 1917
MabI	ACCWGGT	1 cut(s)	1522
MaeI	CTAG	8 cut(s)	722, 1062, 1638, 2051, 2120, 2168, 2360, 2405
MaeII	ACGT	1 cut(s)	639
MaeIII	GTNAC	2 cut(s)	803, 1019
MboII	GAAGA	9 cut(s)	28, 31, 86, 220, 639, 1299, 1576, 2186, 2453
MflI	RGATCY	6 cut(s)	940, 1058, 1419, 1663, 2410, 2423
MhlI	GDGCHC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
MlsI	TGGCCA	2 cut(s)	1001, 2162
MluNI	TGGCCA	2 cut(s)	1001, 2162
Mly113I	GGCGCC	1 cut(s)	2228
MlyI	GAGTC	3 cut(s)	85, 1514, 1671
MmeI	TCCRAC	4 cut(s)	209, 477, 1264, 1537
Mox20I	TGGCCA	2 cut(s)	1001, 2162
MroI	TCCGGA	1 cut(s)	1039
MroXI	GAANNNNTTC	2 cut(s)	1251, 1544
MscI	TGGCCA	2 cut(s)	1001, 2162
MslI	CAYNNNNRTG	4 cut(s)	56, 478, 701, 1586
Msp20I	TGGCCA	2 cut(s)	1001, 2162
MspA1I	CMGCKG	1 cut(s)	101
MspCI	CTTAAG	2 cut(s)	775, 808
MspI	CCGG	2 cut(s)	617, 1040
MspR9I	CCNGG	2 cut(s)	296, 1524
Mva1269I	GAATGC	1 cut(s)	1599
MvaI	CCWGG	2 cut(s)	296, 1524
MwoI	GCNNNNNNNGC	6 cut(s)	258, 819, 1033, 1112, 1626, 2017
NarI	GGCGCC	1 cut(s)	2228
NdeI	CATATG	1 cut(s)	1474
NheI	GCTAGC	1 cut(s)	2050
NlaIV	GGNNCC	7 cut(s)	63, 361, 751, 2229, 2369, 2412, 2425
NmeAIII	GCCGAG	1 cut(s)	2564
NmuCI	GTSAC	1 cut(s)	803
NspI	RCATGY	1 cut(s)	859
PagI	TCATGA	3 cut(s)	121, 1587, 2551
PctI	GAATGC	1 cut(s)	1599
PdmI	GAANNNNTTC	2 cut(s)	1251, 1544
PfeI	GAWTC	3 cut(s)	1686, 2069, 2555
PkrI	GCNGC	7 cut(s)	330, 881, 1067, 1619, 1705, 1726, 2518
PleI	GAGTC	3 cut(s)	85, 1513, 1671
PluTI	GGCGCC	1 cut(s)	2231
PpsI	GAGTC	3 cut(s)	85, 1513, 1671
PpuMI	RGGWCCY	4 cut(s)	292, 533, 1632, 2602
Psp124BI	GAGCTC	2 cut(s)	824, 2304
Psp5II	RGGWCCY	4 cut(s)	292, 533, 1632, 2602
Psp6I	CCWGG	2 cut(s)	294, 1522
PspFI	CCCAGC	1 cut(s)	1436
PspGI	CCWGG	2 cut(s)	294, 1522
PspN4I	GGNNCC	7 cut(s)	63, 361, 751, 2229, 2369, 2412, 2425
PspOMI	GGGCCC	2 cut(s)	749, 2367
PspPI	GGNCC	9 cut(s)	292, 533, 749, 750, 1632, 1979, 2367, 2368, 2602
PspPPI	RGGWCCY	4 cut(s)	292, 533, 1632, 2602
PstI	CTGCAG	1 cut(s)	2518
PstNI	CAGNNNCTG	1 cut(s)	295
PsuI	RGATCY	6 cut(s)	940, 1058, 1419, 1663, 2410, 2423
PvuII	CAGCTG	1 cut(s)	101
RsaI	GTAC	3 cut(s)	215, 1157, 1786
RsaNI	GTAC	3 cut(s)	214, 1156, 1785
RseI	CAYNNNNRTG	4 cut(s)	56, 478, 701, 1586
SacI	GAGCTC	2 cut(s)	824, 2304
SatI	GCNGC	7 cut(s)	329, 880, 1066, 1618, 1704, 1725, 2517
Sau96I	GGNCC	9 cut(s)	292, 533, 749, 750, 1632, 1979, 2367, 2368, 2602
SchI	GAGTC	3 cut(s)	85, 1514, 1671
ScrFI	CCNGG	2 cut(s)	296, 1524
SduI	GDGCHC	6 cut(s)	488, 753, 824, 2304, 2371, 2645
SexAI	ACCWGGT	1 cut(s)	1522
SfaNI	GCATC	3 cut(s)	717, 1711, 1917
SfcI	CTRYAG	2 cut(s)	2214, 2514
SfoI	GGCGCC	1 cut(s)	2229
SinI	GGWCC	5 cut(s)	292, 533, 1632, 1979, 2602
SmiMI	CAYNNNNRTG	4 cut(s)	56, 478, 701, 1586
SmlI	CTYRAG	4 cut(s)	338, 775, 808, 823
SmoI	CTYRAG	4 cut(s)	338, 775, 808, 823
SsiI	CCGC	4 cut(s)	813, 1066, 1168, 1553
SspDI	GGCGCC	1 cut(s)	2227
SspI	AATATT	4 cut(s)	181, 1342, 1545, 2632
SspMI	CTAG	8 cut(s)	722, 1062, 1638, 2051, 2120, 2168, 2360, 2405
SstI	GAGCTC	2 cut(s)	824, 2304
StyD4I	CCNGG	2 cut(s)	294, 1522
StyI	CCWWGG	1 cut(s)	582
TaaI	ACNGT	6 cut(s)	239, 348, 420, 681, 1228, 2279
TaiI	ACGT	1 cut(s)	642
TaqI	TCGA	5 cut(s)	658, 842, 1911, 2072, 2332
TatI	WGTACW	2 cut(s)	213, 1155
TauI	GCSGC	1 cut(s)	1068
TfiI	GAWTC	3 cut(s)	1686, 2069, 2555
TscAI	CASTG	8 cut(s)	324, 520, 679, 808, 1078, 1231, 2082, 2502
TseFI	GTSAC	1 cut(s)	803
TseI	GCWGC	6 cut(s)	328, 879, 1617, 1703, 1724, 2516
Tsp45I	GTSAC	1 cut(s)	803
TspGWI	ACGGA	2 cut(s)	221, 1412
TspRI	CASTG	8 cut(s)	324, 520, 679, 808, 1078, 1231, 2082, 2502
Vha464I	CTTAAG	2 cut(s)	775, 808
VpaK11BI	GGWCC	5 cut(s)	292, 533, 1632, 1979, 2602
XagI	CCTNNNNNAGG	1 cut(s)	2063
XapI	RAATTY	3 cut(s)	157, 500, 1093
XbaI	TCTAGA	1 cut(s)	2359
XceI	RCATGY	1 cut(s)	859
XcmI	CCANNNNNNNNNTGG	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	1993
XmnI	GAANNNNTTC	2 cut(s)	1251, 1544
XspI	CTAG	8 cut(s)	722, 1062, 1638, 2051, 2120, 2168, 2360, 2405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.