Rroxscaffold_1G00064380

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
86182826 .. 86191256
8431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00064380.1

Sequence Viewer

Length: 2307 bp
ATGTGTGGCCGGACATTGTTGTCTGTCTCCATGCTCAAGCATTTACAGAGGGCGCCCATGCCTCCACAGCTAGCTTTTGCAGCTCAAACAGAGAATGGAATGCCAACTGGGTTGTTGCGCAGAAAAATGGCAGAAGTTCTCGATAGTCAAAAACCTATCTTCTTTAGCTATGTTGCTGTGCTTATTGTGCTTATTTGCGTTGTACCCATCAATTCTCAAGCACAATCTGGGACTCTTGCACCTGATGAAGTGGAAGCCCTTCGTGAAATAGCTGAACAACTGAATAAGAAGGACTGGAATTTCAGTGATCCCTGTAGCAATGTTCCAACTTTTTCGAGCCCACATACTGATCAGTACAACAATACTCTTGTCTGCAATTGCTCATTCTCCGGCAATGTATGTCACATTGAAAGCATTAATCTTACTGGTCAGGATCTAGATGGTGTTCTTCCAGCATCACTGGCTAAGCTACCTTATCTTAAGCAACAAGTCAAAATGATAATTGATAATGGCTTGGTCCTGCCAACTGGTAATTACAGCTATCTTCGTGCTAACAATCTCACTGGAGAGTTGCCTGTGGCTCTCACTAATCTGATCAAATTAAAAGTACTTCAGATAGGTAGTAACAACTTCACTGGAAGAATACCCAACTACTTTCAAAGTTGGAAAGACCTCCAAAGCTTAGAGATGCTAGCGAGTGGTCTTGAAGGGCCCCTTCCATCCAGTCTCTCTGCCTTAAAGAATATGACAGACCTGAGGATTGGTGACTTAAGTGGTGAGAGTTCAGAATTTCCAAATTTATCAAACATGACAAACATGAAAAAACTGATGTTAAGGAGCTGCAATATAACAGGAGAAATCCCTGGATATATATCCACCATGACAAACCTGGCTGTTTTAGATCTAAGCTTCAACAGATTGGAAGGGGCCATTCCAAATTTTGCTCAAATAATGCAGTTGTCAACAATATATTTGACAAGTAACCTGCTTACTGGGCTTCCAGACTGGATCAAAAGTAGAGATAATCAGTACTCATTGCATATAAATTGTGGTGGAAAACAAACCACCATCGGAAGCATCAAGTATGAAGGAGATGAAGCCTCAGGAGGTGCAGCAACATTTGTTCAGGCCACACCCAATTGGGGGTTTAGTAGCACTGGTGATTTCGTAGATGCTTGGAGTTCTGACAAGGACTATATTGCCAATAATGTTTCCATACTTAAAATGAACAACTCCAAATTGTACACAACTGCACGACTTTCTCCTCTTTCTCTCACCTACTATGCCCATTGCTTAGCAAATGGAAATTACACTGTGCAACTACACTTCGCAGAGATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGAATGTTTGATGTTTATATCCAGGACAAACTAGTATTGAAGGATTTTGATATTACAAAGGAAGCACTAGGGGTTGATAAGGACGTGATCAAGGTATTTAAAGCAGTTGTTAATGTTAAGACTTTACTGATCCGCTTTCAGTGGGCTGGGAGAGGGACAACTAATGTTCCACTTAGAGGAAAATATGGTTCTCTTATATCAGCCATCTCAGTGCAGTCTGAATTGAGAGGATTGGATCTGCACACTGGTTTCTTTAGATTCAAACAAATTAAAGCTGCTACTAACAACTTTAATGCTGCAAACAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGTGAATTATTGGATGGTAGTTTTATTGCTGTTAAGCAACTTTCTTCAAAATCAAAGCAGGGAAATCGTGAATTCGTGAATGAAATAGGCATGATGTCTGCATTAGAACACCCAAATCTTGTTAAACTGTATGGATGTTGCACGGAAGGAAATCAGTTATTCTTGGTCTACGAATACATGGAGAACAATAGCCTATCACATACTTTATTTGGTTCGGAGGAAGGCCTACGGAAATTGGACTGGCCTACAAGGCAGAAAATATGTGTTGGTATTGCAAGGGGTCTTGCTTTCCTGCATGATGGAACTTTGAAAATCGTTCATAGAGATATCAAACCAACCAACATATTGCTGGATAGGGACCTTAATGCTAAGATAGCTGACTTTGGTTTGGCTAAGCTGGACGAAGAGGAGCAAACCCATATTAGCACCAGAGTTGCTGGAACTATAGGATACATGGCGCCAGAGTATGCTTTATGGGGCTATTTAACCGATAAGGCAGATGTATACAGTTTTGGTGCTGTAGCATTGGAACTGGTATCAGGGAAAAAAACATCAAATATCGGCCAAATGAAAATTTTGTATGCCTTCTAG

Protein Analysis

768

Amino Acids

84.8

Weight (kDa)

8.08

Isoelectric Point (pI)

31.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 181 - 340 4.7e-08 Leucine-rich repeat region
Malectin PF11721 345 - 528 6.5e-38 Malectin domain
Pkinase PF00069 557 - 756 2.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 559 - 755 4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 19
Acc16I TGCGCA 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 993
AccB1I GGYRCC 2 cut(s) 52, 2173
AccI GTMKAC 2 cut(s) 1884, 2220
AciI CCGC 1 cut(s) 1510
AclWI GGATC 5 cut(s) 302, 441, 1016, 1501, 1620
AcoI YGGCCR 2 cut(s) 7, 2278
AcsI RAATTY 6 cut(s) 298, 788, 796, 937, 1787, 2289
AcuI CTGAAG 1 cut(s) 596
AcyI GRCGYC 2 cut(s) 53, 2174
AfaI GTAC 5 cut(s) 204, 356, 609, 1031, 1244
AfiI CCNNNNNNNGG 3 cut(s) 1142, 1143, 1553
AflII CTTAAG 2 cut(s) 479, 769
AgsI TTSAA 8 cut(s) 410, 659, 707, 913, 1417, 1639, 1764, 2026
AhdI GACNNNNNGTC 1 cut(s) 1354
AhlI ACTAGT 1 cut(s) 1408
AjiI CACGTC 1 cut(s) 1462
AjnI CCWGG 3 cut(s) 862, 888, 1398
AjuI GAANNNNNNNTTGG 2 cut(s) 1683, 1715
Alw26I GTCTC 3 cut(s) 31, 731, 1341
AlwI GGATC 5 cut(s) 302, 441, 1016, 1501, 1620
AoxI GGCC 7 cut(s) 7, 710, 927, 1128, 1939, 1958, 2278
ApaI GGGCCC 1 cut(s) 714
ApeKI GCWGC 5 cut(s) 80, 840, 1112, 1652, 1673
ApoI RAATTY 6 cut(s) 298, 788, 796, 937, 1787, 2289
AseI ATTAAT 1 cut(s) 417
Asp700I GAANNNNTTC 1 cut(s) 258
AspLEI GCGC 3 cut(s) 55, 120, 2176
AspS9I GGNCC 5 cut(s) 517, 710, 711, 927, 2074
AsuHPI GGTGA 5 cut(s) 776, 788, 1172, 1267, 1730
AsuNHI GCTAGC 2 cut(s) 70, 691
AvaII GGWCC 2 cut(s) 517, 2074
AxyI CCTNAGG 2 cut(s) 755, 1102
BaeGI GKGCMC 1 cut(s) 714
BanI GGYRCC 2 cut(s) 52, 2173
BanII GRGCYC 2 cut(s) 341, 714
BbsI GAAGAC 1 cut(s) 1381
BbvI GCAGC 5 cut(s) 92, 827, 1124, 1639, 1660
BccI CCATC 7 cut(s) 215, 434, 727, 1076, 1589, 1724, 2009
BcgI CGANNNNNNTGC 2 cut(s) 1763, 1797
BciT130I CCWGG 3 cut(s) 864, 890, 1400
BciVI GTATCC 1 cut(s) 2159
BclI TGATCA 3 cut(s) 349, 594, 1464
BcoDI GTCTC 3 cut(s) 31, 731, 1341
BcuI ACTAGT 1 cut(s) 1408
BfaI CTAG 6 cut(s) 71, 437, 692, 1409, 1445, 2305
BfmI CTRYAG 3 cut(s) 313, 2160, 2235
BfoI RGCGCY 2 cut(s) 56, 2177
BfrI CTTAAG 2 cut(s) 479, 769
BfuAI ACCTGC 1 cut(s) 993
BfuI GTATCC 1 cut(s) 2159
BglI GCCNNNNNGGC 1 cut(s) 1966
BglII AGATCT 1 cut(s) 901
BisI GCNGC 5 cut(s) 81, 841, 1113, 1653, 1674
BlpI GCTNAGC 3 cut(s) 465, 1294, 2109
BlsI GCNGC 5 cut(s) 82, 842, 1114, 1654, 1675
BmcAI AGTACT 2 cut(s) 609, 1031
Bme1390I CCNGG 3 cut(s) 864, 890, 1400
Bme18I GGWCC 2 cut(s) 517, 2074
BmeRI GACNNNNNGTC 1 cut(s) 1354
BmgBI CACGTC 1 cut(s) 1462
BmgT120I GGNCC 5 cut(s) 517, 710, 711, 927, 2074
BmiI GGNNCC 6 cut(s) 54, 712, 713, 928, 2075, 2175
BmrFI CCNGG 3 cut(s) 864, 890, 1400
BmrI ACTGGG 2 cut(s) 117, 1002
BmsI GCATC 4 cut(s) 464, 678, 1086, 1162
BmtI GCTAGC 2 cut(s) 74, 695
BmuI ACTGGG 2 cut(s) 117, 1002
BpiI GAAGAC 1 cut(s) 1381
BpmI CTGGAG 1 cut(s) 585
Bpu1102I GCTNAGC 3 cut(s) 465, 1294, 2109
BpuEI CTTGAG 2 cut(s) 20, 201
BsaBI GATNNNNATC 1 cut(s) 871
BsaHI GRCGYC 2 cut(s) 53, 2174
BsaJI CCNNGG 1 cut(s) 862
Bsc4I CCNNNNNNNGG 3 cut(s) 1142, 1143, 1553
Bse21I CCTNAGG 2 cut(s) 755, 1102
Bse3DI GCAATG 4 cut(s) 325, 400, 1034, 1288
Bse8I GATNNNNATC 1 cut(s) 871
BseBI CCWGG 3 cut(s) 864, 890, 1400
BseDI CCNNGG 1 cut(s) 862
BseGI GGATG 3 cut(s) 719, 1735, 1856
BseJI GATNNNNATC 1 cut(s) 871
BseLI CCNNNNNNNGG 3 cut(s) 1142, 1143, 1553
BseMI GCAATG 4 cut(s) 325, 400, 1034, 1288
BseMII CTCAG 4 cut(s) 746, 1116, 1357, 1599
BseRI GAGGAG 2 cut(s) 1254, 2138
BseSI GKGCMC 1 cut(s) 714
BseXI GCAGC 5 cut(s) 92, 827, 1124, 1639, 1660
BseYI CCCAGC 1 cut(s) 1523
BsgI GTGCAG 4 cut(s) 1131, 1236, 1601, 1610
BshFI GGCC 7 cut(s) 9, 712, 929, 1130, 1941, 1960, 2280
BshNI GGYRCC 2 cut(s) 52, 2173
BsiSI CCGG 2 cut(s) 10, 390
BslFI GGGAC 3 cut(s) 244, 1546, 2087
BslI CCNNNNNNNGG 3 cut(s) 1142, 1143, 1553
BsmAI GTCTC 3 cut(s) 31, 731, 1341
BsmFI GGGAC 3 cut(s) 244, 1546, 2087
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 7 cut(s) 9, 712, 929, 1130, 1941, 1960, 2280
Bsp120I GGGCCC 1 cut(s) 710
Bsp1286I GDGCHC 2 cut(s) 341, 714
Bsp1407I TGTACA 1 cut(s) 1242
Bsp143I GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
Bsp1720I GCTNAGC 3 cut(s) 465, 1294, 2109
BspACI CCGC 1 cut(s) 1510
BspANI GGCC 7 cut(s) 9, 712, 929, 1130, 1941, 1960, 2280
BspCNI CTCAG 4 cut(s) 747, 1115, 1356, 1598
BspLI GGNNCC 6 cut(s) 54, 712, 713, 928, 2075, 2175
BspMI ACCTGC 1 cut(s) 993
BspOI GCTAGC 2 cut(s) 74, 695
BspPI GGATC 5 cut(s) 302, 441, 1016, 1501, 1620
BspT107I GGYRCC 2 cut(s) 52, 2173
BspTI CTTAAG 2 cut(s) 479, 769
BsrDI GCAATG 4 cut(s) 325, 400, 1034, 1288
BsrGI TGTACA 1 cut(s) 1242
BssECI CCNNGG 1 cut(s) 862
BssMI GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
BssNAI GTATAC 1 cut(s) 2221
BssNI GRCGYC 2 cut(s) 53, 2174
Bst1107I GTATAC 1 cut(s) 2221
Bst2UI CCWGG 3 cut(s) 864, 890, 1400
Bst4CI ACNGT 3 cut(s) 1315, 1845, 2225
Bst6I CTCTTC 1 cut(s) 2115
BstACI GRCGYC 2 cut(s) 53, 2174
BstAFI CTTAAG 2 cut(s) 479, 769
BstAUI TGTACA 1 cut(s) 1242
BstC8I GCNNGC 2 cut(s) 72, 693
BstF5I GGATG 3 cut(s) 719, 1735, 1856
BstH2I RGCGCY 2 cut(s) 56, 2177
BstHHI GCGC 3 cut(s) 55, 120, 2176
BstKTI GATC 9 cut(s) 310, 352, 436, 597, 904, 1011, 1467, 1509, 1615
BstMAI GTCTC 3 cut(s) 31, 731, 1341
BstMBI GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
BstMWI GCNNNNNNNGC 7 cut(s) 67, 80, 187, 461, 994, 1966, 2090
BstNI CCWGG 3 cut(s) 864, 890, 1400
BstSCI CCNGG 3 cut(s) 862, 888, 1398
BstSFI CTRYAG 3 cut(s) 313, 2160, 2235
BstSLI GKGCMC 1 cut(s) 714
BstV1I GCAGC 5 cut(s) 92, 827, 1124, 1639, 1660
BstV2I GAAGAC 1 cut(s) 1381
BstX2I RGATCY 3 cut(s) 433, 901, 1612
BstYI RGATCY 3 cut(s) 433, 901, 1612
BstZ17I GTATAC 1 cut(s) 2221
Bsu36I CCTNAGG 2 cut(s) 755, 1102
BsuI GTATCC 1 cut(s) 2159
BsuRI GGCC 7 cut(s) 9, 712, 929, 1130, 1941, 1960, 2280
BtrI CACGTC 1 cut(s) 1462
BtsCI GGATG 3 cut(s) 719, 1735, 1856
BtsIMutI CAGTG 9 cut(s) 310, 458, 561, 633, 1155, 1311, 1523, 1593, 1620
BveI ACCTGC 1 cut(s) 993
Cac8I GCNNGC 2 cut(s) 72, 693
CfoI GCGC 3 cut(s) 55, 120, 2176
Cfr13I GGNCC 5 cut(s) 517, 710, 711, 927, 2074
Csp6I GTAC 5 cut(s) 203, 355, 608, 1030, 1243
CviAII CATG 9 cut(s) 31, 58, 808, 817, 880, 1807, 1894, 2012, 2170
CviQI GTAC 5 cut(s) 203, 355, 608, 1030, 1243
DinI GGCGCC 2 cut(s) 54, 2175
DpnI GATC 9 cut(s) 309, 351, 435, 596, 903, 1010, 1466, 1508, 1614
DpnII GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
DraI TTTAAA 1 cut(s) 1477
DrdI GACNNNNNNGTC 1 cut(s) 19
DriI GACNNNNNGTC 1 cut(s) 1354
DseDI GACNNNNNNGTC 1 cut(s) 19
EaeI YGGCCR 2 cut(s) 7, 2278
Eam1104I CTCTTC 1 cut(s) 2115
Eam1105I GACNNNNNGTC 1 cut(s) 1354
EarI CTCTTC 1 cut(s) 2115
Eco147I AGGCCT 1 cut(s) 1941
Eco24I GRGCYC 2 cut(s) 341, 714
Eco32I GATATC 1 cut(s) 2044
Eco47I GGWCC 2 cut(s) 517, 2074
Eco57I CTGAAG 1 cut(s) 596
Eco81I CCTNAGG 2 cut(s) 755, 1102
EcoO109I RGGNCCY 3 cut(s) 710, 711, 2074
EcoRI GAATTC 1 cut(s) 1787
EcoRII CCWGG 3 cut(s) 862, 888, 1398
EcoRV GATATC 1 cut(s) 2044
EcoT38I GRGCYC 2 cut(s) 341, 714
EgeI GGCGCC 2 cut(s) 54, 2175
EheI GGCGCC 2 cut(s) 54, 2175
FaeI CATG 9 cut(s) 34, 61, 811, 820, 883, 1810, 1897, 2015, 2173
FalI AAGNNNNNCTT 2 cut(s) 699, 731
FaqI GGGAC 3 cut(s) 244, 1546, 2087
FatI CATG 9 cut(s) 30, 57, 807, 816, 879, 1806, 1893, 2011, 2169
FbaI TGATCA 3 cut(s) 349, 594, 1464
FblI GTMKAC 2 cut(s) 1884, 2220
Fnu4HI GCNGC 5 cut(s) 81, 841, 1113, 1653, 1674
FokI GGATG 3 cut(s) 706, 1742, 1863
FriOI GRGCYC 2 cut(s) 341, 714
Fsp4HI GCNGC 5 cut(s) 81, 841, 1113, 1653, 1674
FspBI CTAG 6 cut(s) 71, 437, 692, 1409, 1445, 2305
FspI TGCGCA 1 cut(s) 119
GlaI GCGC 3 cut(s) 54, 119, 2175
GluI GCNGC 5 cut(s) 81, 841, 1113, 1653, 1674
GsaI CCCAGC 1 cut(s) 1527
GsuI CTGGAG 1 cut(s) 585
HaeII RGCGCY 2 cut(s) 56, 2177
HaeIII GGCC 7 cut(s) 9, 712, 929, 1130, 1941, 1960, 2280
HapII CCGG 2 cut(s) 10, 390
HhaI GCGC 3 cut(s) 55, 120, 2176
Hin1I GRCGYC 2 cut(s) 53, 2174
Hin1II CATG 9 cut(s) 34, 61, 811, 820, 883, 1810, 1897, 2015, 2173
Hin6I GCGC 3 cut(s) 53, 118, 2174
HinP1I GCGC 3 cut(s) 53, 118, 2174
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HindIII AAGCTT 3 cut(s) 679, 907, 1682
HinfI GANTC 2 cut(s) 232, 1635
HpaII CCGG 2 cut(s) 10, 390
HphI GGTGA 5 cut(s) 776, 788, 1172, 1267, 1730
Hpy166II GTNNAC 5 cut(s) 963, 1245, 1711, 1885, 2221
Hpy188I TCNGA 8 cut(s) 594, 615, 787, 1073, 1186, 1346, 1597, 1933
Hpy188III TCNNGA 9 cut(s) 140, 263, 431, 437, 704, 1001, 1104, 1784, 1792
Hpy8I GTNNAC 5 cut(s) 963, 1245, 1711, 1885, 2221
HpyCH4III ACNGT 3 cut(s) 1315, 1845, 2225
HpyCH4IV ACGT 1 cut(s) 1461
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 80, 187, 461, 994, 1966, 2090
HpySE526I ACGT 1 cut(s) 1461
Hsp92I GRCGYC 2 cut(s) 53, 2174
Hsp92II CATG 9 cut(s) 34, 61, 811, 820, 883, 1810, 1897, 2015, 2173
HspAI GCGC 3 cut(s) 53, 118, 2174
KasI GGCGCC 2 cut(s) 52, 2173
Ksp22I TGATCA 3 cut(s) 349, 594, 1464
Kzo9I GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
LmnI GCTCC 3 cut(s) 837, 1703, 2125
Lsp1109I GCAGC 5 cut(s) 92, 827, 1124, 1639, 1660
LweI GCATC 4 cut(s) 464, 678, 1086, 1162
MaeI CTAG 6 cut(s) 71, 437, 692, 1409, 1445, 2305
MaeII ACGT 1 cut(s) 1461
MaeIII GTNAC 4 cut(s) 401, 623, 764, 980
MalI GATC 9 cut(s) 309, 351, 435, 596, 903, 1010, 1466, 1508, 1614
MboI GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
MboII GAAGA 7 cut(s) 151, 440, 536, 651, 1386, 1752, 2132
MfeI CAATTG 2 cut(s) 376, 1138
MflI RGATCY 3 cut(s) 433, 901, 1612
MhlI GDGCHC 2 cut(s) 341, 714
Mly113I GGCGCC 2 cut(s) 53, 2174
MlyI GAGTC 1 cut(s) 226
MmeI TCCRAC 3 cut(s) 350, 644, 1351
MroXI GAANNNNTTC 1 cut(s) 258
MslI CAYNNNNRTG 1 cut(s) 1586
MspCI CTTAAG 2 cut(s) 479, 769
MspI CCGG 2 cut(s) 10, 390
MspR9I CCNGG 3 cut(s) 864, 890, 1400
MunI CAATTG 2 cut(s) 376, 1138
Mva1269I GAATGC 1 cut(s) 105
MvaI CCWGG 3 cut(s) 864, 890, 1400
MwoI GCNNNNNNNGC 7 cut(s) 67, 80, 187, 461, 994, 1966, 2090
NarI GGCGCC 2 cut(s) 53, 2174
NdeII GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
NheI GCTAGC 2 cut(s) 70, 691
NlaIII CATG 9 cut(s) 34, 61, 811, 820, 883, 1810, 1897, 2015, 2173
NlaIV GGNNCC 6 cut(s) 54, 712, 713, 928, 2075, 2175
NmuCI GTSAC 2 cut(s) 401, 764
NsbI TGCGCA 1 cut(s) 119
PceI AGGCCT 1 cut(s) 1941
PctI GAATGC 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 258
PfeI GAWTC 1 cut(s) 1635
PfoI TCCNGGA 1 cut(s) 1398
PkrI GCNGC 5 cut(s) 82, 842, 1114, 1654, 1675
PleI GAGTC 1 cut(s) 226
PluTI GGCGCC 2 cut(s) 56, 2177
PpsI GAGTC 1 cut(s) 226
PpuMI RGGWCCY 1 cut(s) 2074
PshBI ATTAAT 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 2074
Psp6I CCWGG 3 cut(s) 862, 888, 1398
PspFI CCCAGC 1 cut(s) 1523
PspGI CCWGG 3 cut(s) 862, 888, 1398
PspN4I GGNNCC 6 cut(s) 54, 712, 713, 928, 2075, 2175
PspOMI GGGCCC 1 cut(s) 710
PspPI GGNCC 5 cut(s) 517, 710, 711, 927, 2074
PspPPI RGGWCCY 1 cut(s) 2074
PsuI RGATCY 3 cut(s) 433, 901, 1612
RsaI GTAC 5 cut(s) 204, 356, 609, 1031, 1244
RsaNI GTAC 5 cut(s) 203, 355, 608, 1030, 1243
RseI CAYNNNNRTG 1 cut(s) 1586
SatI GCNGC 5 cut(s) 81, 841, 1113, 1653, 1674
Sau3AI GATC 9 cut(s) 307, 349, 433, 594, 901, 1008, 1464, 1506, 1612
Sau96I GGNCC 5 cut(s) 517, 710, 711, 927, 2074
ScaI AGTACT 2 cut(s) 609, 1031
SchI GAGTC 1 cut(s) 226
ScrFI CCNGG 3 cut(s) 864, 890, 1400
SduI GDGCHC 2 cut(s) 341, 714
SfaNI GCATC 4 cut(s) 464, 678, 1086, 1162
SfcI CTRYAG 3 cut(s) 313, 2160, 2235
SfoI GGCGCC 2 cut(s) 54, 2175
SinI GGWCC 2 cut(s) 517, 2074
SmiMI CAYNNNNRTG 1 cut(s) 1586
SmlI CTYRAG 4 cut(s) 35, 216, 479, 769
SmoI CTYRAG 4 cut(s) 35, 216, 479, 769
SpeI ACTAGT 1 cut(s) 1408
SseBI AGGCCT 1 cut(s) 1941
SsiI CCGC 1 cut(s) 1510
SspDI GGCGCC 2 cut(s) 52, 2173
SspMI CTAG 6 cut(s) 71, 437, 692, 1409, 1445, 2305
StuI AGGCCT 1 cut(s) 1941
StyD4I CCNGG 3 cut(s) 862, 888, 1398
TaaI ACNGT 3 cut(s) 1315, 1845, 2225
TaiI ACGT 1 cut(s) 1464
TaqI TCGA 2 cut(s) 141, 335
TatI WGTACW 4 cut(s) 354, 607, 1029, 1242
TfiI GAWTC 1 cut(s) 1635
TscAI CASTG 9 cut(s) 310, 465, 568, 640, 1162, 1318, 1523, 1593, 1627
TseFI GTSAC 2 cut(s) 401, 764
TseI GCWGC 5 cut(s) 80, 840, 1112, 1652, 1673
Tsp45I GTSAC 2 cut(s) 401, 764
TspDTI ATGAA 8 cut(s) 261, 833, 1101, 1110, 1241, 1812, 2024, 2300
TspGWI ACGGA 2 cut(s) 1874, 1960
TspRI CASTG 9 cut(s) 310, 465, 568, 640, 1162, 1318, 1523, 1593, 1627
Vha464I CTTAAG 2 cut(s) 479, 769
VpaK11BI GGWCC 2 cut(s) 517, 2074
VspI ATTAAT 1 cut(s) 417
XapI RAATTY 6 cut(s) 298, 788, 796, 937, 1787, 2289
XbaI TCTAGA 1 cut(s) 436
XcmI CCANNNNNNNNNTGG 2 cut(s) 886, 2062
XmiI GTMKAC 2 cut(s) 1884, 2220
XmnI GAANNNNTTC 1 cut(s) 258
XspI CTAG 6 cut(s) 71, 437, 692, 1409, 1445, 2305
ZrmI AGTACT 2 cut(s) 609, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.