Rroxscaffold_1G00064470

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
86277906 .. 86311694
33789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00064470.1

Sequence Viewer

Length: 525 bp
ATGGCGCCAGAATATGCCCTGTGGGGTTGTTTGACCTATAAAGCAGATGTCTACAGTTTCGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACATGAAATATCGACCCAATGAGAATATTCAGTGTCTTATGGATTGGGCCCTTGTTTTGCAACAAAGAGGGAACTTGCTGGAGCTGGTGGATCCAAGGTTGGGGTCCAATTTCAGTAAGAAAGAGGCGATTAGAACTATTAAAGTAGCTCTACTGTGCGCCAATCCAACAGCTGCACTTAGGCCTATCATGTCTGCAGTAGTGAGCATGCTTGAAGGGCGGACCCCGGTGGATGAAGTGGTTCTGGATCCAAGTATCCATGGTGATGAAATGACGAGGTTAAGAGCCTTCGAAGACCAGTTTGATCACAGTACTGCACAAGGGAGCTCCCCAAGTGGAAGTCATAGCCTCATTCGTTCATCAGATGCAGCATGGACTGGTTCTTCTGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAA

Protein Analysis

174

Amino Acids

19.02

Weight (kDa)

5.59

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 51
AciI CCGC 1 cut(s) 316
AclWI GGATC 4 cut(s) 182, 195, 338, 351
AcuI CTGAAG 1 cut(s) 483
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 409
AfiI CCNNNNNNNGG 1 cut(s) 197
AgsI TTSAA 1 cut(s) 311
AluBI AGCT 4 cut(s) 181, 245, 269, 423
AluI AGCT 4 cut(s) 181, 245, 269, 423
Alw21I GWGCWC 1 cut(s) 425
AlwI GGATC 4 cut(s) 182, 195, 338, 351
AoxI GGCC 2 cut(s) 144, 278
ApaI GGGCCC 1 cut(s) 148
ApeKI GCWGC 2 cut(s) 269, 464
Asp700I GAANNNNTTC 1 cut(s) 336
AspLEI GCGC 2 cut(s) 7, 257
AspS9I GGNCC 4 cut(s) 144, 145, 201, 318
AsuC2I CCSGG 1 cut(s) 323
AsuHPI GGTGA 1 cut(s) 371
AsuII TTCGAA 1 cut(s) 387
AvaII GGWCC 2 cut(s) 201, 318
BaeGI GKGCMC 1 cut(s) 148
BamHI GGATCC 2 cut(s) 187, 343
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 148, 425
BbsI GAAGAC 2 cut(s) 396, 489
Bbv12I GWGCWC 1 cut(s) 425
BbvI GCAGC 2 cut(s) 256, 476
BciVI GTATCC 1 cut(s) 362
BclI TGATCA 1 cut(s) 400
BcnI CCSGG 1 cut(s) 323
BfmI CTRYAG 2 cut(s) 52, 291
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 362
BglII AGATCT 1 cut(s) 502
BisI GCNGC 2 cut(s) 270, 465
BlsI GCNGC 2 cut(s) 271, 466
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 323
Bme18I GGWCC 2 cut(s) 201, 318
BmgT120I GGNCC 4 cut(s) 144, 145, 201, 318
BmiI GGNNCC 6 cut(s) 6, 146, 189, 202, 320, 345
BmrFI CCNGG 1 cut(s) 323
BmsI GCATC 1 cut(s) 451
BpiI GAAGAC 2 cut(s) 396, 489
BpmI CTGGAG 1 cut(s) 197
Bpu14I TTCGAA 1 cut(s) 387
BpuMI CCSGG 1 cut(s) 323
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 191, 321, 355
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse1I ACTGG 2 cut(s) 394, 478
BseDI CCNNGG 3 cut(s) 191, 321, 355
BseGI GGATG 1 cut(s) 334
BseLI CCNNNNNNNGG 1 cut(s) 197
BseNI ACTGG 2 cut(s) 394, 478
BseSI GKGCMC 1 cut(s) 148
BseXI GCAGC 2 cut(s) 256, 476
BsgI GTGCAG 2 cut(s) 255, 396
BshFI GGCC 2 cut(s) 146, 280
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 425
BsiSI CCGG 1 cut(s) 323
BslI CCNNNNNNNGG 1 cut(s) 197
BsnI GGCC 2 cut(s) 146, 280
Bsp119I TTCGAA 1 cut(s) 387
Bsp120I GGGCCC 1 cut(s) 144
Bsp1286I GDGCHC 2 cut(s) 148, 425
Bsp143I GATC 4 cut(s) 187, 343, 400, 502
Bsp19I CCATGG 1 cut(s) 355
BspACI CCGC 1 cut(s) 316
BspANI GGCC 2 cut(s) 146, 280
BspLI GGNNCC 6 cut(s) 6, 146, 189, 202, 320, 345
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 4 cut(s) 182, 195, 338, 351
BspT104I TTCGAA 1 cut(s) 387
BspT107I GGYRCC 1 cut(s) 4
BsrI ACTGG 2 cut(s) 394, 478
BssECI CCNNGG 3 cut(s) 191, 321, 355
BssMI GATC 4 cut(s) 187, 343, 400, 502
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 191, 355
Bst4CI ACNGT 4 cut(s) 56, 82, 252, 407
BstACI GRCGYC 1 cut(s) 5
BstBI TTCGAA 1 cut(s) 387
BstC8I GCNNGC 1 cut(s) 305
BstDEI CTNAG 1 cut(s) 275
BstDSI CCRYGG 1 cut(s) 355
BstF5I GGATG 1 cut(s) 334
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 257
BstKTI GATC 4 cut(s) 190, 346, 403, 505
BstMBI GATC 4 cut(s) 187, 343, 400, 502
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 1 cut(s) 321
BstSFI CTRYAG 2 cut(s) 52, 291
BstSLI GKGCMC 1 cut(s) 148
BstV1I GCAGC 2 cut(s) 256, 476
BstV2I GAAGAC 2 cut(s) 396, 489
BstX2I RGATCY 3 cut(s) 187, 343, 502
BstYI RGATCY 3 cut(s) 187, 343, 502
BsuI GTATCC 1 cut(s) 362
BsuRI GGCC 2 cut(s) 146, 280
BtgI CCRYGG 1 cut(s) 355
BtsCI GGATG 1 cut(s) 334
BtsIMutI CAGTG 1 cut(s) 134
Cac8I GCNNGC 1 cut(s) 305
CfoI GCGC 2 cut(s) 7, 257
Cfr13I GGNCC 4 cut(s) 144, 145, 201, 318
Csp6I GTAC 1 cut(s) 408
CviAII CATG 5 cut(s) 100, 286, 304, 356, 468
CviJI RGCY 8 cut(s) 146, 181, 245, 269, 280, 383, 423, 444
CviKI_1 RGCY 8 cut(s) 146, 181, 245, 269, 280, 383, 423, 444
CviQI GTAC 1 cut(s) 408
DdeI CTNAG 1 cut(s) 275
DinI GGCGCC 1 cut(s) 6
DpnI GATC 4 cut(s) 189, 345, 402, 504
DpnII GATC 4 cut(s) 187, 343, 400, 502
EciI GGCGGA 1 cut(s) 331
Ecl136II GAGCTC 1 cut(s) 423
Eco130I CCWWGG 2 cut(s) 191, 355
Eco147I AGGCCT 1 cut(s) 280
Eco24I GRGCYC 2 cut(s) 148, 425
Eco47I GGWCC 2 cut(s) 201, 318
Eco53kI GAGCTC 1 cut(s) 423
Eco57I CTGAAG 1 cut(s) 483
EcoICRI GAGCTC 1 cut(s) 423
EcoO109I RGGNCCY 1 cut(s) 145
EcoT14I CCWWGG 2 cut(s) 191, 355
EcoT38I GRGCYC 2 cut(s) 148, 425
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 191, 355
FaeI CATG 5 cut(s) 103, 289, 307, 359, 471
FatI CATG 5 cut(s) 99, 285, 303, 355, 467
FbaI TGATCA 1 cut(s) 400
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 2 cut(s) 270, 465
FokI GGATG 1 cut(s) 341
FriOI GRGCYC 2 cut(s) 148, 425
Fsp4HI GCNGC 2 cut(s) 270, 465
GlaI GCGC 2 cut(s) 6, 256
GluI GCNGC 2 cut(s) 270, 465
GsuI CTGGAG 1 cut(s) 197
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 146, 280
HapII CCGG 1 cut(s) 323
HhaI GCGC 2 cut(s) 7, 257
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 5 cut(s) 103, 289, 307, 359, 471
Hin6I GCGC 2 cut(s) 5, 255
HinP1I GCGC 2 cut(s) 5, 255
HpaII CCGG 1 cut(s) 323
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 3 cut(s) 62, 460, 502
Hpy188III TCNNGA 1 cut(s) 341
Hpy8I GTNNAC 1 cut(s) 52
HpyAV CCTTC 2 cut(s) 305, 394
HpyCH4III ACNGT 4 cut(s) 56, 82, 252, 407
HpyCH4IV ACGT 1 cut(s) 494
HpyCH4V TGCA 7 cut(s) 71, 86, 157, 272, 293, 413, 464
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 1 cut(s) 275
HpySE526I ACGT 1 cut(s) 494
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 5 cut(s) 103, 289, 307, 359, 471
HspAI GCGC 2 cut(s) 5, 255
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 4 cut(s) 187, 343, 400, 502
LmnI GCTCC 3 cut(s) 178, 420, 428
LpnPI CCDG 9 cut(s) 21, 32, 72, 161, 167, 326, 336, 407, 459
Lsp1109I GCAGC 2 cut(s) 256, 476
LweI GCATC 1 cut(s) 451
MaeII ACGT 1 cut(s) 494
MaeIII GTNAC 1 cut(s) 484
MalI GATC 4 cut(s) 189, 345, 402, 504
MboI GATC 4 cut(s) 187, 343, 400, 502
MboII GAAGA 3 cut(s) 401, 471, 489
MflI RGATCY 3 cut(s) 187, 343, 502
MhlI GDGCHC 2 cut(s) 148, 425
MluCI AATT 1 cut(s) 205
Mly113I GGCGCC 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 287
MnlI CCTC 4 cut(s) 158, 214, 366, 455
MroXI GAANNNNTTC 1 cut(s) 336
MseI TTAA 3 cut(s) 237, 377, 523
MslI CAYNNNNRTG 1 cut(s) 360
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 323
MwoI GCNNNNNNNGC 1 cut(s) 313
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 323
NcoI CCATGG 1 cut(s) 355
NdeII GATC 4 cut(s) 187, 343, 400, 502
NlaIII CATG 5 cut(s) 103, 289, 307, 359, 471
NlaIV GGNNCC 6 cut(s) 6, 146, 189, 202, 320, 345
NspI RCATGY 1 cut(s) 307
NspV TTCGAA 1 cut(s) 387
PaeI GCATGC 1 cut(s) 307
PceI AGGCCT 1 cut(s) 280
PdmI GAANNNNTTC 1 cut(s) 336
PkrI GCNGC 2 cut(s) 271, 466
PluTI GGCGCC 1 cut(s) 8
Psp124BI GAGCTC 1 cut(s) 425
PspN4I GGNNCC 6 cut(s) 6, 146, 189, 202, 320, 345
PspOMI GGGCCC 1 cut(s) 144
PspPI GGNCC 4 cut(s) 144, 145, 201, 318
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 3 cut(s) 187, 343, 502
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 1 cut(s) 409
RsaNI GTAC 1 cut(s) 408
RseI CAYNNNNRTG 1 cut(s) 360
SacI GAGCTC 1 cut(s) 425
SaqAI TTAA 3 cut(s) 237, 377, 523
SatI GCNGC 2 cut(s) 270, 465
Sau3AI GATC 4 cut(s) 187, 343, 400, 502
Sau96I GGNCC 4 cut(s) 144, 145, 201, 318
ScaI AGTACT 1 cut(s) 409
ScrFI CCNGG 1 cut(s) 323
SduI GDGCHC 2 cut(s) 148, 425
SetI ASST 8 cut(s) 38, 183, 197, 247, 271, 377, 425, 497
SfaNI GCATC 1 cut(s) 451
SfcI CTRYAG 2 cut(s) 52, 291
SfoI GGCGCC 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 387
SinI GGWCC 2 cut(s) 201, 318
SmiMI CAYNNNNRTG 1 cut(s) 360
SphI GCATGC 1 cut(s) 307
Sse9I AATT 1 cut(s) 205
SseBI AGGCCT 1 cut(s) 280
SsiI CCGC 1 cut(s) 316
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 124
SstI GAGCTC 1 cut(s) 425
StuI AGGCCT 1 cut(s) 280
StyD4I CCNGG 1 cut(s) 321
StyI CCWWGG 2 cut(s) 191, 355
TaaI ACNGT 4 cut(s) 56, 82, 252, 407
TaiI ACGT 1 cut(s) 497
TaqI TCGA 2 cut(s) 109, 387
TasI AATT 1 cut(s) 205
TatI WGTACW 1 cut(s) 407
Tru1I TTAA 3 cut(s) 237, 377, 523
Tru9I TTAA 3 cut(s) 237, 377, 523
TscAI CASTG 1 cut(s) 134
TseI GCWGC 2 cut(s) 269, 464
TspDTI ATGAA 4 cut(s) 116, 345, 378, 444
TspRI CASTG 1 cut(s) 134
VpaK11BI GGWCC 2 cut(s) 201, 318
XceI RCATGY 1 cut(s) 307
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 336
ZrmI AGTACT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.