Rw5G008260

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8863141 .. 8869279
6139 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008260.1

Sequence Viewer

Length: 2991 bp
ATGGTAAGAATTAACAACCCAGAGGAGATGGTCATCTTCTTCGTACTGGTCATTTGCATGGCACAAGTCATATTTGAAGCACAGGCCATGACTCTTCCAGCTGATGAGGTGCAAGCCCTTCATGAAATTGCTGAGCAACTGAACAAAAAGGACTGGAATTTGAGCGACCCATGTAGAAATATTCCAACTTTCTCAATGCCACATACGGATCAGTACATGAACACCCTCTTCTGCAACTGTTCTTTCTCTGGCAATGTGTGCCATGTCCAAACCATTTTTCTTGTGGGTCAGGACCTGGATGGTGTGCTTCCACCATCACTGGTGAAGCTGCCTTACCTCAAGGAACTTAATCTGGGTCAGAATTACCTTAGTGGCTCAATTCCACCAGAATGGGGCTCTACCAAGTTGGAATTTCTTGTTCTCAGTGTGAACAACTTATCAGGACCTATCCCTGCCTATTTGGGGAACATAACTACTCTCCGAGCTTTGGCCTTGGAAAGCAACTTATTTTCTGGAAGTATTCCACCGGAGATGGGAAGATTGATTAACATGGAAGTCCTCTACCTTCGAGCTAACAATCTCACTGGACAGTTGCCTGTGGCTCTCACTAATATGACCAAATTAAAAACACTTAACAACTTCACTGGAAAAATTCCGAACTATTTTCTTAGTTGGAAAGAACTTCAGATGTTAGAGATGCAAGCGAGTGGCTTTGAAGGGCCCATTCCTTCTACTCTTTCTGCCTTAAGTAATATGACATACTTAGTAATCAGTGACTTAAGCGGAGAGAGCTCAAGTTTTCCAAACTTGTCGAACATGAAAAACATGCAGAAATTGATGTTAAGGAGCTGCAATATAACAGGATCAATTCCAGAATATATGTCTAACATGACAAGCCTGCAAGTTTTAGATCTTAGCTTCAACAGATTGAAAGGGAGTATCCCAAATCTTGACAAGTTATTAGGATTGGCCACAATATATCTGACAAGTAACTGGCTTACTGGGCTTCCGGAGTGGATCAAAAATAGAGATAGCCGCTACATAATAGATCTTTCTTACAACAATTTTTCAAGGGACGTAGTTGGGACAGAATGTCGAGAAACCTTTAATGTGTTCAAAAGTTTCTCCAGACAGAACAACTCAATTCTTTGCAATTGCCTCGATCCATGTTCAAAAGAACAGTATTCATTGCACATAAATTGTGGTGGAAAACCAACCACCATTGGAAGCATCAAGTACGAGGGGGATGAAGCCTCGGGAGGTGGAGCAAAGCTTTTTCGGGACCCAGTTAATTGGGGATTTAGTAGCACTGGTGATTATGGGATTATGAATTTTGACCAAGCCTACATAGCAAACAATGTTTCCATACTCAAAATGAACAACTCGGAATTGTACAGAACTGCCCGCCTTTCTTTTCTTTCACTCACATATTACGCTCGTTGCTTAGCAAATGGAAATTACACTGTGAAACTACACTTTGCAGAAATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGATTTTTTGATGTCTATATTCAGGAAAAACTGGTATTGAAGGATTTTAATATTAAAAAGGAAGCACAGGGGGTTGATAAGGAAGTGATTAAAGTATTTAAAGCAGTTGTCAATGTTAGCACTTTAGAGATCCGTTTTTATTGGGCTGGGAAAGGGACAACTAATGCCCCAAAGAGAGGGACATATGGTTCACTTATATCGGCTATCTCAGTTGAGTCTGATTTTAAGCCACCTGGTGATAGCAACAGGAAAATATTCATAGCGGTTGGAGTTGCTTTATTCTTATGCCTCATCTTCATGGTTTTTGGCATTCTTTGGTTAAGAAGCTGCTTTGGAGGCAGGACCTCTAGGGAACAAGAGCTGAAAGGATTGGATCTGCAAACTGGACTCTTTAGATTCAAACAAATCAAAGCTGCCACTAACAACTTTGATGCTGCAAACAAGCTTGGGGAAGGTGGCTTTGGAATTGTTTACAAGGGGGAATTATTAGATGGTACTACTATTGCTGTTAAGCAACTTTCATCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAATGAAATAGGGATGATTTCTGGATTGCAACATCCAAATCTTGTTAGATTGTATGGATGTTGCATCGAAGGAAATCAGTTGTTGCTGGTATATGAATACATGGAGAACAATAGTCTTGCACATGCATTGTTTGGTCCACAAGAAGGTATACTGAAACTGGACTGGCCTAAGAGGCAAAAAATATGTATTGGCATTGCAAGAGGGCTAGCTTTCCTGCATGAGGAATCGACACTGAAAATTGTTCATAGAGATATCAAAATGACTAATATACTGCTAGATAGAGACCTAAATCCTAAAATCTCTGACTTTGGTTTGGCCAAGCTAGACGAAGAGGAGAAAACGCATATTAGCACCAGAGTAGCTGGAACTATAGGATACATGGCGCCAGAATATGCACTATGGGGTTATTTAACTGACAAAGTAGATGTTTACAGTTTTGGAGTTGTTGCATTAGAGCTCGTATCTGGCAAAAACAACATCAAATATCGACCAAATGAGAATTATGTATGCCTTCTAGATTGGGCCCTTGTTTTGCAACAAAAAGAAAACCTGATGGAGCTAGTGGATCCAAAGTTGGGATCCAAGTTCAACAAGGAAGAGGCAATGAGAATGATTAAAGTAGCTCTGCTATGCACCAATCCATCACCAGCACTGAGACCTACAATGTCTGCAGCACTAAGCATGCTTGAAGGCCGAGCTGTTATTCATGAATCAAGTAGAAATCTGAGTATGTATGGTGATGAACTGGGGTTTAAGGCCCTAAGAGACGACTATAATGATCTGAATATTCAACAGAGCCCAAGAGAGACTCAGAGCCTCATTTATTCATCCGATGCCAAAGCAGGGCCAGATGCCTCTTCCTCAACGACTGTCCAGGATAGCTATACATTTAATCTTGATTCTCCATAG

Protein Analysis

996

Amino Acids

111.37

Weight (kDa)

6.85

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 152 - 342 6.7e-09 Leucine-rich repeat region
Malectin PF11721 396 - 578 5.1e-36 Malectin domain
Pkinase PF00069 654 - 921 2.7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 655 - 919 1.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2464
AccI GTMKAC 1 cut(s) 2230
AccIII TCCGGA 1 cut(s) 1009
AciI CCGC 4 cut(s) 783, 1036, 1405, 1790
AcoI YGGCCR 2 cut(s) 969, 2397
AcsI RAATTY 4 cut(s) 157, 410, 651, 1330
AcuI CTGAAG 1 cut(s) 668
AcyI GRCGYC 1 cut(s) 2465
AdeI CACNNNGTG 1 cut(s) 1763
AfaI GTAC 5 cut(s) 45, 215, 1238, 1394, 2023
AfiI CCNNNNNNNGG 9 cut(s) 392, 462, 487, 533, 1703, 2225, 2302, 2657, 2925
AflII CTTAAG 2 cut(s) 745, 778
AhdI GACNNNNNGTC 2 cut(s) 1092, 1504
AjnI CCWGG 3 cut(s) 294, 1759, 2955
AjuI GAANNNNNNNTTGG 4 cut(s) 261, 293, 1971, 2003
AloI GAACNNNNNNTCC 2 cut(s) 1699, 1731
Alw21I GWGCWC 2 cut(s) 794, 2541
Alw26I GTCTC 5 cut(s) 1491, 2358, 2731, 2841, 2882
AlwNI CAGNNNCTG 1 cut(s) 295
Ama87I CYCGRG 1 cut(s) 1255
Aor13HI TCCGGA 1 cut(s) 1009
ApaI GGGCCC 2 cut(s) 723, 2608
ApeKI GCWGC 6 cut(s) 328, 849, 1854, 1940, 1961, 2753
ApoI RAATTY 4 cut(s) 157, 410, 651, 1330
Asp700I GAANNNNTTC 2 cut(s) 1488, 1781
AspLEI GCGC 1 cut(s) 2467
AsuHPI GGTGA 5 cut(s) 334, 1325, 1775, 2718, 2831
AsuNHI GCTAGC 1 cut(s) 2287
AvaI CYCGRG 1 cut(s) 1255
AvaII GGWCC 5 cut(s) 292, 443, 1282, 1869, 2216
BaeGI GKGCMC 2 cut(s) 723, 2608
BalI TGGCCA 2 cut(s) 971, 2399
BamHI GGATCC 2 cut(s) 2647, 2660
BanI GGYRCC 1 cut(s) 2464
BanII GRGCYC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
BarI GAAGNNNNNNTAC 2 cut(s) 317, 349
BbsI GAAGAC 1 cut(s) 1531
Bbv12I GWGCWC 2 cut(s) 794, 2541
BbvI GCAGC 6 cut(s) 315, 836, 1841, 1927, 1948, 2765
BccI CCATC 7 cut(s) 22, 293, 322, 526, 2012, 2629, 2731
BcgI CGANNNNNNTGC 2 cut(s) 1141, 1175
BciT130I CCWGG 3 cut(s) 296, 1761, 2957
BciVI GTATCC 2 cut(s) 950, 2450
BcoDI GTCTC 5 cut(s) 1491, 2358, 2731, 2841, 2882
BfaI CTAG 6 cut(s) 1875, 2288, 2357, 2405, 2597, 2642
BfmI CTRYAG 2 cut(s) 2451, 2751
BfoI RGCGCY 1 cut(s) 2468
BfrI CTTAAG 2 cut(s) 745, 778
BfuI GTATCC 2 cut(s) 950, 2450
BglI GCCNNNNNGGC 1 cut(s) 2254
BglII AGATCT 2 cut(s) 910, 1048
BisI GCNGC 7 cut(s) 329, 850, 1036, 1855, 1941, 1962, 2754
BlpI GCTNAGC 2 cut(s) 132, 1444
BlsI GCNGC 7 cut(s) 330, 851, 1037, 1856, 1942, 1963, 2755
Bme1390I CCNGG 3 cut(s) 296, 1761, 2957
Bme18I GGWCC 5 cut(s) 292, 443, 1282, 1869, 2216
BmeRI GACNNNNNGTC 2 cut(s) 1092, 1504
BmeT110I CYCGRG 1 cut(s) 1255
BmiI GGNNCC 7 cut(s) 721, 1283, 1284, 2466, 2606, 2649, 2662
BmrFI CCNGG 3 cut(s) 296, 1761, 2957
BmrI ACTGGG 3 cut(s) 1011, 1280, 2837
BmsI GCATC 6 cut(s) 687, 1239, 1948, 2154, 2905, 2923
BmtI GCTAGC 1 cut(s) 2291
BmuI ACTGGG 3 cut(s) 1011, 1280, 2837
BpiI GAAGAC 1 cut(s) 1531
BpmI CTGGAG 1 cut(s) 1111
Bpu1102I GCTNAGC 2 cut(s) 132, 1444
BpuEI CTTGAG 2 cut(s) 323, 778
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 2465
BsaI GGTCTC 2 cut(s) 2358, 2731
BsaJI CCNNGG 2 cut(s) 492, 1254
BsaWI WCCGGW 2 cut(s) 526, 1009
Bsc4I CCNNNNNNNGG 9 cut(s) 392, 462, 487, 533, 1703, 2225, 2302, 2657, 2925
Bse3DI GCAATG 4 cut(s) 259, 1187, 2274, 2691
Bse8I GATNNNNATC 1 cut(s) 32
BseAI TCCGGA 1 cut(s) 1009
BseBI CCWGG 3 cut(s) 296, 1761, 2957
BseDI CCNNGG 2 cut(s) 492, 1254
BseGI GGATG 6 cut(s) 304, 1252, 2100, 2113, 2144, 2909
BseJI GATNNNNATC 1 cut(s) 32
BseLI CCNNNNNNNGG 9 cut(s) 392, 462, 487, 533, 1703, 2225, 2302, 2657, 2925
BseMI GCAATG 4 cut(s) 259, 1187, 2274, 2691
BseMII CTCAG 7 cut(s) 123, 436, 1507, 1749, 2726, 2798, 2906
BseRI GAGGAG 2 cut(s) 38, 2429
BseSI GKGCMC 2 cut(s) 723, 2608
BseXI GCAGC 6 cut(s) 315, 836, 1841, 1927, 1948, 2765
BseYI CCCAGC 1 cut(s) 1673
BshNI GGYRCC 1 cut(s) 2464
BsiHKAI GWGCWC 2 cut(s) 794, 2541
BsiHKCI CYCGRG 1 cut(s) 1255
BsiSI CCGG 2 cut(s) 527, 1010
BslFI GGGAC 5 cut(s) 1088, 1099, 1295, 1696, 1720
BslI CCNNNNNNNGG 9 cut(s) 392, 462, 487, 533, 1703, 2225, 2302, 2657, 2925
BsmAI GTCTC 5 cut(s) 1491, 2358, 2731, 2841, 2882
BsmBI CGTCTC 1 cut(s) 2841
BsmFI GGGAC 5 cut(s) 1088, 1099, 1295, 1696, 1720
BsmI GAATGC 1 cut(s) 1836
Bso31I GGTCTC 2 cut(s) 2358, 2731
BsoBI CYCGRG 1 cut(s) 1255
Bsp120I GGGCCC 2 cut(s) 719, 2604
Bsp1286I GDGCHC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
Bsp13I TCCGGA 1 cut(s) 1009
Bsp1407I TGTACA 1 cut(s) 1392
Bsp1720I GCTNAGC 2 cut(s) 132, 1444
BspACI CCGC 4 cut(s) 783, 1036, 1405, 1790
BspCNI CTCAG 7 cut(s) 124, 435, 1506, 1748, 2727, 2799, 2905
BspEI TCCGGA 1 cut(s) 1009
BspHI TCATGA 2 cut(s) 121, 2788
BspLI GGNNCC 7 cut(s) 721, 1283, 1284, 2466, 2606, 2649, 2662
BspMAI CTGCAG 1 cut(s) 2755
BspOI GCTAGC 1 cut(s) 2291
BspT107I GGYRCC 1 cut(s) 2464
BspTI CTTAAG 2 cut(s) 745, 778
BspTNI GGTCTC 2 cut(s) 2358, 2731
BsrDI GCAATG 4 cut(s) 259, 1187, 2274, 2691
BsrGI TGTACA 1 cut(s) 1392
BssECI CCNNGG 2 cut(s) 492, 1254
BssNAI GTATAC 1 cut(s) 2231
BssNI GRCGYC 1 cut(s) 2465
BssT1I CCWWGG 1 cut(s) 492
Bst1107I GTATAC 1 cut(s) 2231
Bst2UI CCWGG 3 cut(s) 296, 1761, 2957
Bst4CI ACNGT 6 cut(s) 239, 591, 1182, 1465, 2516, 2953
Bst6I CTCTTC 5 cut(s) 99, 233, 2406, 2673, 2944
BstACI GRCGYC 1 cut(s) 2465
BstAFI CTTAAG 2 cut(s) 745, 778
BstAPI GCANNNNNTGC 1 cut(s) 258
BstAUI TGTACA 1 cut(s) 1392
BstC8I GCNNGC 6 cut(s) 114, 702, 899, 1405, 2289, 2765
BstENI CCTNNNNNAGG 1 cut(s) 2300
BstF5I GGATG 6 cut(s) 304, 1252, 2100, 2113, 2144, 2909
BstH2I RGCGCY 1 cut(s) 2468
BstHHI GCGC 1 cut(s) 2467
BstMAI GTCTC 5 cut(s) 1491, 2358, 2731, 2841, 2882
BstMWI GCNNNNNNNGC 6 cut(s) 258, 789, 1003, 1349, 1863, 2254
BstNI CCWGG 3 cut(s) 296, 1761, 2957
BstNSI RCATGY 3 cut(s) 829, 2207, 2767
BstSCI CCNGG 3 cut(s) 294, 1759, 2955
BstSFI CTRYAG 2 cut(s) 2451, 2751
BstSLI GKGCMC 2 cut(s) 723, 2608
BstV1I GCAGC 6 cut(s) 315, 836, 1841, 1927, 1948, 2765
BstV2I GAAGAC 1 cut(s) 1531
BstX2I RGATCY 6 cut(s) 910, 1048, 1656, 1900, 2647, 2660
BstXI CCANNNNNNTGG 2 cut(s) 390, 1293
BstYI RGATCY 6 cut(s) 910, 1048, 1656, 1900, 2647, 2660
BstZ17I GTATAC 1 cut(s) 2231
BsuI GTATCC 2 cut(s) 950, 2450
BtsCI GGATG 6 cut(s) 304, 1252, 2100, 2113, 2144, 2909
BtsIMutI CAGTG 9 cut(s) 317, 430, 582, 642, 778, 1308, 1461, 2312, 2732
Cac8I GCNNGC 6 cut(s) 114, 702, 899, 1405, 2289, 2765
CaiI CAGNNNCTG 1 cut(s) 295
CciI TCATGA 2 cut(s) 121, 2788
CfoI GCGC 1 cut(s) 2467
CsiI ACCWGGT 1 cut(s) 1759
Csp6I GTAC 5 cut(s) 44, 214, 1237, 1393, 2022
CviQI GTAC 5 cut(s) 44, 214, 1237, 1393, 2022
DinI GGCGCC 1 cut(s) 2466
DraI TTTAAA 1 cut(s) 1627
DraIII CACNNNGTG 1 cut(s) 1763
DriI GACNNNNNGTC 2 cut(s) 1092, 1504
EaeI YGGCCR 2 cut(s) 969, 2397
Eam1104I CTCTTC 5 cut(s) 99, 233, 2406, 2673, 2944
Eam1105I GACNNNNNGTC 2 cut(s) 1092, 1504
EarI CTCTTC 5 cut(s) 99, 233, 2406, 2673, 2944
Ecl136II GAGCTC 2 cut(s) 792, 2539
Eco130I CCWWGG 1 cut(s) 492
Eco24I GRGCYC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
Eco31I GGTCTC 2 cut(s) 2358, 2731
Eco32I GATATC 1 cut(s) 2335
Eco47I GGWCC 5 cut(s) 292, 443, 1282, 1869, 2216
Eco53kI GAGCTC 2 cut(s) 792, 2539
Eco57I CTGAAG 1 cut(s) 668
Eco88I CYCGRG 1 cut(s) 1255
EcoICRI GAGCTC 2 cut(s) 792, 2539
EcoNI CCTNNNNNAGG 1 cut(s) 2300
EcoO109I RGGNCCY 7 cut(s) 292, 443, 719, 1282, 1869, 2605, 2839
EcoRII CCWGG 3 cut(s) 294, 1759, 2955
EcoRV GATATC 1 cut(s) 2335
EcoT14I CCWWGG 1 cut(s) 492
EcoT22I ATGCAT 1 cut(s) 2209
EcoT38I GRGCYC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
EgeI GGCGCC 1 cut(s) 2466
EheI GGCGCC 1 cut(s) 2466
ErhI CCWWGG 1 cut(s) 492
Esp3I CGTCTC 1 cut(s) 2841
FaqI GGGAC 5 cut(s) 1088, 1099, 1295, 1696, 1720
FauI CCCGC 1 cut(s) 1412
FauNDI CATATG 1 cut(s) 1711
FblI GTMKAC 1 cut(s) 2230
Fnu4HI GCNGC 7 cut(s) 329, 850, 1036, 1855, 1941, 1962, 2754
FokI GGATG 6 cut(s) 311, 1259, 2100, 2107, 2151, 2896
FriOI GRGCYC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
Fsp4HI GCNGC 7 cut(s) 329, 850, 1036, 1855, 1941, 1962, 2754
FspBI CTAG 6 cut(s) 1875, 2288, 2357, 2405, 2597, 2642
GlaI GCGC 1 cut(s) 2466
GluI GCNGC 7 cut(s) 329, 850, 1036, 1855, 1941, 1962, 2754
GsaI CCCAGC 1 cut(s) 1677
GsuI CTGGAG 1 cut(s) 1111
HaeII RGCGCY 1 cut(s) 2468
HapII CCGG 2 cut(s) 527, 1010
HhaI GCGC 1 cut(s) 2467
Hin1I GRCGYC 1 cut(s) 2465
Hin6I GCGC 1 cut(s) 2465
HinP1I GCGC 1 cut(s) 2465
HindIII AAGCTT 2 cut(s) 1271, 1970
HinfI GANTC 8 cut(s) 91, 1742, 1914, 1923, 2306, 2792, 2890, 2981
HpaII CCGG 2 cut(s) 527, 1010
HphI GGTGA 5 cut(s) 334, 1325, 1775, 2718, 2831
Hpy166II GTNNAC 6 cut(s) 430, 1718, 1999, 2219, 2231, 2512
Hpy8I GTNNAC 6 cut(s) 430, 1718, 1999, 2219, 2231, 2512
HpyCH4III ACNGT 6 cut(s) 239, 591, 1182, 1465, 2516, 2953
HpyCH4IV ACGT 1 cut(s) 1077
HpyF10VI GCNNNNNNNGC 6 cut(s) 258, 789, 1003, 1349, 1863, 2254
HpySE526I ACGT 1 cut(s) 1077
Hsp92I GRCGYC 1 cut(s) 2465
HspAI GCGC 1 cut(s) 2465
KasI GGCGCC 1 cut(s) 2464
KflI GGGWCCC 1 cut(s) 1282
Kpn2I TCCGGA 1 cut(s) 1009
LmnI GCTCC 3 cut(s) 846, 1265, 2638
Lsp1109I GCAGC 6 cut(s) 315, 836, 1841, 1927, 1948, 2765
LweI GCATC 6 cut(s) 687, 1239, 1948, 2154, 2905, 2923
MabI ACCWGGT 1 cut(s) 1759
MaeI CTAG 6 cut(s) 1875, 2288, 2357, 2405, 2597, 2642
MaeII ACGT 1 cut(s) 1077
MaeIII GTNAC 2 cut(s) 773, 989
MfeI CAATTG 1 cut(s) 1153
MflI RGATCY 6 cut(s) 910, 1048, 1656, 1900, 2647, 2660
MhlI GDGCHC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
MlsI TGGCCA 2 cut(s) 971, 2399
MluNI TGGCCA 2 cut(s) 971, 2399
Mly113I GGCGCC 1 cut(s) 2465
MlyI GAGTC 4 cut(s) 85, 1751, 1908, 2884
MmeI TCCRAC 5 cut(s) 209, 387, 653, 1501, 1774
Mox20I TGGCCA 2 cut(s) 971, 2399
Mph1103I ATGCAT 1 cut(s) 2209
MroI TCCGGA 1 cut(s) 1009
MroXI GAANNNNTTC 2 cut(s) 1488, 1781
MscI TGGCCA 2 cut(s) 971, 2399
MslI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1823
Msp20I TGGCCA 2 cut(s) 971, 2399
MspA1I CMGCKG 1 cut(s) 101
MspCI CTTAAG 2 cut(s) 745, 778
MspI CCGG 2 cut(s) 527, 1010
MspR9I CCNGG 3 cut(s) 296, 1761, 2957
MunI CAATTG 1 cut(s) 1153
Mva1269I GAATGC 1 cut(s) 1836
MvaI CCWGG 3 cut(s) 296, 1761, 2957
MwoI GCNNNNNNNGC 6 cut(s) 258, 789, 1003, 1349, 1863, 2254
NarI GGCGCC 1 cut(s) 2465
NdeI CATATG 1 cut(s) 1711
NheI GCTAGC 1 cut(s) 2287
NlaIV GGNNCC 7 cut(s) 721, 1283, 1284, 2466, 2606, 2649, 2662
NmeAIII GCCGAG 1 cut(s) 2801
NmuCI GTSAC 1 cut(s) 773
NsiI ATGCAT 1 cut(s) 2209
NspI RCATGY 3 cut(s) 829, 2207, 2767
PaeI GCATGC 1 cut(s) 2767
PagI TCATGA 2 cut(s) 121, 2788
PctI GAATGC 1 cut(s) 1836
PdmI GAANNNNTTC 2 cut(s) 1488, 1781
PfeI GAWTC 4 cut(s) 1923, 2306, 2792, 2981
PfoI TCCNGGA 1 cut(s) 2955
PkrI GCNGC 7 cut(s) 330, 851, 1037, 1856, 1942, 1963, 2755
PleI GAGTC 4 cut(s) 85, 1750, 1908, 2884
PluTI GGCGCC 1 cut(s) 2468
PpsI GAGTC 4 cut(s) 85, 1750, 1908, 2884
PpuMI RGGWCCY 4 cut(s) 292, 443, 1282, 1869
Psp124BI GAGCTC 2 cut(s) 794, 2541
Psp5II RGGWCCY 4 cut(s) 292, 443, 1282, 1869
Psp6I CCWGG 3 cut(s) 294, 1759, 2955
PspFI CCCAGC 1 cut(s) 1673
PspGI CCWGG 3 cut(s) 294, 1759, 2955
PspN4I GGNNCC 7 cut(s) 721, 1283, 1284, 2466, 2606, 2649, 2662
PspOMI GGGCCC 2 cut(s) 719, 2604
PspPPI RGGWCCY 4 cut(s) 292, 443, 1282, 1869
PstI CTGCAG 1 cut(s) 2755
PstNI CAGNNNCTG 1 cut(s) 295
PsuI RGATCY 6 cut(s) 910, 1048, 1656, 1900, 2647, 2660
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 5 cut(s) 45, 215, 1238, 1394, 2023
RsaNI GTAC 5 cut(s) 44, 214, 1237, 1393, 2022
RseI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1823
SacI GAGCTC 2 cut(s) 794, 2541
SatI GCNGC 7 cut(s) 329, 850, 1036, 1855, 1941, 1962, 2754
SchI GAGTC 4 cut(s) 85, 1751, 1908, 2884
ScrFI CCNGG 3 cut(s) 296, 1761, 2957
SduI GDGCHC 6 cut(s) 398, 723, 794, 2541, 2608, 2882
SexAI ACCWGGT 1 cut(s) 1759
SfaNI GCATC 6 cut(s) 687, 1239, 1948, 2154, 2905, 2923
SfcI CTRYAG 2 cut(s) 2451, 2751
SfoI GGCGCC 1 cut(s) 2466
SinI GGWCC 5 cut(s) 292, 443, 1282, 1869, 2216
SmiMI CAYNNNNRTG 4 cut(s) 56, 388, 611, 1823
SmlI CTYRAG 4 cut(s) 338, 745, 778, 793
SmoI CTYRAG 4 cut(s) 338, 745, 778, 793
SphI GCATGC 1 cut(s) 2767
SsiI CCGC 4 cut(s) 783, 1036, 1405, 1790
SspDI GGCGCC 1 cut(s) 2464
SspI AATATT 4 cut(s) 181, 1579, 1782, 2869
SspMI CTAG 6 cut(s) 1875, 2288, 2357, 2405, 2597, 2642
SstI GAGCTC 2 cut(s) 794, 2541
StyD4I CCNGG 3 cut(s) 294, 1759, 2955
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 6 cut(s) 239, 591, 1182, 1465, 2516, 2953
TaiI ACGT 1 cut(s) 1080
TaqI TCGA 7 cut(s) 568, 812, 1096, 1161, 2148, 2309, 2569
TatI WGTACW 2 cut(s) 213, 1392
TauI GCSGC 1 cut(s) 1038
TfiI GAWTC 4 cut(s) 1923, 2306, 2792, 2981
TscAI CASTG 9 cut(s) 324, 430, 589, 649, 778, 1315, 1468, 2319, 2739
TseFI GTSAC 1 cut(s) 773
TseI GCWGC 6 cut(s) 328, 849, 1854, 1940, 1961, 2753
Tsp45I GTSAC 1 cut(s) 773
TspGWI ACGGA 2 cut(s) 221, 1649
TspRI CASTG 9 cut(s) 324, 430, 589, 649, 778, 1315, 1468, 2319, 2739
Vha464I CTTAAG 2 cut(s) 745, 778
VpaK11BI GGWCC 5 cut(s) 292, 443, 1282, 1869, 2216
XagI CCTNNNNNAGG 1 cut(s) 2300
XapI RAATTY 4 cut(s) 157, 410, 651, 1330
XbaI TCTAGA 1 cut(s) 2596
XceI RCATGY 3 cut(s) 829, 2207, 2767
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XmiI GTMKAC 1 cut(s) 2230
XmnI GAANNNNTTC 2 cut(s) 1488, 1781
XspI CTAG 6 cut(s) 1875, 2288, 2357, 2405, 2597, 2642
Zsp2I ATGCAT 1 cut(s) 2209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.