FvH4_3g06840

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
3955742 .. 3962656
6915 bp
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UTR
Exon/CDS
Intron
FvH4_3g06840.t4

Sequence Viewer

Length: 3108 bp
ATGAAGATGGCAATAGGAGCTGGGTTATTTCTGCCTAATAGTGGTGGGAAAACCATCATGAACCTCATCGTGGTGGTGATGCTGGTTATTAGCTGCGATAATGGATTAGTCGAAGTTGAGGCGCTTACAACTCTTCTTCCTGCTTCTGAAGTGGCTGCCCTAAAAGAAATTGCTACACAGATAGGAAAAACAGACTGGGACTTCAGCGTAGACCCGTGCCTGAATGACACAACCCACACAAGCTGGGCTACACCAAAGTCTGCTGATAGGCCTCTATTCAACAACACTCTCACCTGCAACTGCTCCTTCCCTGATGGCTCATGCCATGTCATTAACATTATTCTTAGAGGGCAAGATCTTGCTGGTGTTCTTCCACCATCTATTGCAAAATTACCCTACCTTACACAAATTGATTTCACGAGGAACTTTCTTAGTGGTAATATACCGAGTGAATGGGGCTCTACAAAGTTGGAATATATGTCCTTTAATGTGAACAACTTAACTGGACCAATCCCTGCTTTCTTGGGGAACATTACCACTCTAAGATACTTGAATCTAGAGACTAACATGTTCAATGGAACTGTTCCTCCTGAGCTTGGGAATTTGGTTAACTTACAGAATCTCATTATCAGTACAAACAATCTCACAGGAGTGTTGCCAGTGAATCTCACTAGCCTGAGCAAATTAGCAGAACTGAGGATTAGTAGTAACAACTTCACTGGAAAAGTTCCGGATTATTTCCAGAGTTGGAATCAACTTACGCAAATCGAGATCCAAGCTAGTGGTTTAGAAGGCCCTATTCCATCTAGCATTTCTGTTTTGAGGAATTTAACAGAATTAAGGATCAGCGACTTAAATGGAGGGGGTTCAGTGTTTCCAGACTTAAGTAATATGACAAGCTTGCAAAGATTAATGCTGAGGAGCTGTAATTTAAATGGATCTATTCCTGATTTATCAGCAATGACAGCAATGAATATCTTAGATCTCAGCTTCAACAAACTGGAAGGAAGCATTCCTGATCTTCAAGAACTTGTTGAGACCAAACTGCAGTACTTGTATCTGACAAGCAACTTGCTCAATGGCTCTATTCCAGACTGGATTAAGAGCAGTGATAACCGCTACCAGATAGATGTTTCTTACAATAATTTTTTGGAGAGCTCTGAGCCAACTACGTGTACTGAATATGTGAACGTGTTCAAAAGCTCTGCCGTACCAAACAACTCCTTATCTGGAGCATGCCTGGATAAATTTCCATGTACCGAAGTTCAGTACTCATTGCATATAAACTGTGGTGGTAAAGAAACCACTATTGATGACATCACATTCCAAGATGATACAAATCTAAGAGGTGGAGCGAACTTTGTTCCTGCAAATCCTAACTGGGGAGTCAGTAGCACAGGCTTTTTCTGGGATACTGATCTCACCTCTACAGACTACATAGCAAATAATGTATCGGCACTTGAAATGGAGAACTCTCAATTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACGTATTATGCAAACTGCTTAGCAGAAGGAAACTATACTGTGAGCCTTCACTTTGCGGAGATAATAATCAGTGGCAATAAATCTTATCAAAGTGTTGGAAGACGGATATTTGATGTCTATATTCAGGAGAAACTTGTATTGAAGGATTTTGACATTGTAAAAGCAGCACAAGGGGTTGATAAGGTAGTCATAGTGGACACAAAAGCGGTTCAAGTTACAAACAGATCCCTAGAGATTCGGTTTCATTGGTCTGGAAAAGGCACAACAGCATCCCCTGAACGAGGAGTCTATGGTCCCCTTATATCAGCCATTTCTATAGAGCCTGAGTTCAAGATTCCTAAAACTCATGATAGTAAAAGAAAGATGTACATTGTGGTTGGAGTTTCAGTTGGAGCTTCAGTTTTGTGCCTCTTTATCTTCATTTTTTGCATTCTTTGGTGGAAAGGCTGTCTGGTGGATAGCGAGACATCAAGGGAAGAAGCTCTGAGAGGACTGGATCTGAAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTTTGAACAAAATTGGGGAAGGTGGTTTTGGTTGTGTCTACAAGGGCACATTATTGGATGGCACTGCAATTGCAGTTAAGCAACTCTCATCAAAATCAAAGCAAGGAAATCGTGAGTTTGTGAATGAAATAGGCATGATATCTGGTTTACAACATCCAAATGTGGTTAGATTATACGGTTGCTGTATTGAAGGAAACCAATTACTGTTGGTGTACGAATACATGGAAAATAACAGCCTTGCACATTCTTTGTTTGAGGAAGAGAAAGGTTTTCTAAATCTGGACTGGCCAACAAGGCAAAAGGTATGCCTAGGCATAGCAAGAGGTTTGGCTTTTCTGCACGAGGAATCAACACTGAAGGTTGTACATAGAGACATCAAAACGACAAATGTATTACTGGACAAAGACCTCAATGCTAAGATTTCGGACTTTGGTTTAGCCAAGCTTGACGAAGAGGAGAACACACACATTAGCACAAGAATTGCTGGAACAATAGGTTACATGGCTCCGGAATATGCACTATGGGGTTGTTTGACCTACAAAGCAGATGTCTACAGTTTTGGTGTTGTTGCATTAGAAATTGTTGCCGGAAAGAACAACATGAAGTTTCGACCAAATGATGATTTTGTATGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATTTAAAGGAGCTGGTGGATCAGCGTCTCGGGTCAGATTACAACAAGGAACAGGCCATTAGAATGGCCAAAGTTGCTTTGTTGTGCACCAATTCAGCACCATCGCTTAGGCCTACCATGTCCGTAGTAGTGAGCATGCTGGAAGGGAAGACCGCGGTCCCTGAGTTGATCATGGATCCTAGCATATACGGTGATAAAATGAGGATGACAGCCTTGAGAAACCAGTTTGATCAAATTGTACAGGACAGCTCAATTCGATCTCAATCAAGCTACTCTGAATCTCAGAGCCTCATTGAGTTTTCAGATGTACCATGGACTGGTTCTACGGGTACTACTGCGTCTTCCGATCTCTACAAACGTAATCCTTAG

Protein Analysis

1036

Amino Acids

114.13

Weight (kDa)

5.17

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 15 - 210 2.4e-11 Leucine-rich repeat region
LRR_8 PF13855 45 - 100 6.4e-06 Leucine rich repeat
Malectin PF11721 266 - 450 1.1e-37 Malectin domain
Pkinase PF00069 533 - 741 2.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 534 - 800 9.5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 302
Acc36I ACCTGC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 3056
AccI GTMKAC 3 cut(s) 210, 2109, 2622
AccII CGCG 1 cut(s) 2894
AccIII TCCGGA 2 cut(s) 730, 2578
AciI CCGC 5 cut(s) 1117, 1571, 1721, 2892, 2894
AclWI GGATC 9 cut(s) 766, 851, 946, 1734, 2019, 2063, 2766, 2909, 2922
AcoI YGGCCR 2 cut(s) 2357, 2805
AcsI RAATTY 4 cut(s) 601, 826, 1247, 2740
AcuI CTGAAG 5 cut(s) 168, 187, 1896, 2036, 2447
AfiI CCNNNNNNNGG 6 cut(s) 41, 70, 596, 1382, 1796, 3056
AflII CTTAAG 1 cut(s) 883
AflIII ACRYGT 3 cut(s) 567, 1172, 1191
AjnI CCWGG 1 cut(s) 1239
AjuI GAANNNNNNNTTGG 2 cut(s) 2082, 2114
AleI CACNNNNGTG 1 cut(s) 650
AloI GAACNNNNNNTCC 2 cut(s) 571, 603
Alw21I GWGCWC 2 cut(s) 1160, 2828
Alw26I GTCTC 5 cut(s) 554, 1031, 1973, 2436, 2771
Alw44I GTGCAC 1 cut(s) 2824
AlwI GGATC 9 cut(s) 766, 851, 946, 1734, 2019, 2063, 2766, 2909, 2922
Ama87I CYCGRG 1 cut(s) 2768
Aor13HI TCCGGA 2 cut(s) 730, 2578
AoxI GGCC 7 cut(s) 269, 793, 2357, 2715, 2793, 2805, 2849
ApaI GGGCCC 1 cut(s) 2719
ApaLI GTGCAC 1 cut(s) 2824
ApeKI GCWGC 4 cut(s) 93, 155, 1679, 2051
ApoI RAATTY 4 cut(s) 601, 826, 1247, 2740
ArsI GACNNNNNNTTYG 2 cut(s) 2604, 2636
AseI ATTAAT 1 cut(s) 911
Asp700I GAANNNNTTC 1 cut(s) 1193
AspA2I CCTAGG 1 cut(s) 2380
AspLEI GCGC 1 cut(s) 124
AspS9I GGNCC 6 cut(s) 506, 794, 1808, 2715, 2716, 2896
AsuHPI GGTGA 5 cut(s) 88, 283, 1414, 2023, 2942
AvaI CYCGRG 1 cut(s) 2768
AvaII GGWCC 3 cut(s) 506, 1808, 2896
AvrII CCTAGG 1 cut(s) 2380
BaeGI GKGCMC 3 cut(s) 2120, 2719, 2828
BalI TGGCCA 2 cut(s) 2359, 2807
BamHI GGATCC 1 cut(s) 2914
BanII GRGCYC 3 cut(s) 461, 1160, 2719
BauI CACGAG 2 cut(s) 418, 2411
BbsI GAAGAC 4 cut(s) 1621, 2024, 2894, 3072
Bbv12I GWGCWC 2 cut(s) 1160, 2828
BbvCI CCTCAGC 1 cut(s) 917
BbvI GCAGC 4 cut(s) 80, 142, 1691, 2038
BccI CCATC 6 cut(s) 62, 308, 385, 811, 2123, 2848
BceAI ACGGC 1 cut(s) 1193
BcgI CGANNNNNNTGC 2 cut(s) 2162, 2196
BciT130I CCWGG 1 cut(s) 1241
BciVI GTATCC 1 cut(s) 1405
BclI TGATCA 2 cut(s) 2907, 2968
BcoDI GTCTC 5 cut(s) 554, 1031, 1973, 2436, 2771
BfaI CTAG 7 cut(s) 557, 672, 780, 807, 1745, 2381, 2919
BfmI CTRYAG 4 cut(s) 1046, 1428, 1830, 2623
BfoI RGCGCY 1 cut(s) 125
BfrI CTTAAG 1 cut(s) 883
BfuAI ACCTGC 1 cut(s) 302
BfuI GTATCC 1 cut(s) 1405
BglI GCCNNNNNGGC 1 cut(s) 2365
BglII AGATCT 2 cut(s) 355, 982
BisI GCNGC 4 cut(s) 94, 156, 1680, 2052
BlnI CCTAGG 1 cut(s) 2380
BlpI GCTNAGC 1 cut(s) 1534
BlsI GCNGC 4 cut(s) 95, 157, 1681, 2053
BmcAI AGTACT 2 cut(s) 1052, 1271
Bme1390I CCNGG 1 cut(s) 1241
Bme18I GGWCC 3 cut(s) 506, 1808, 2896
BmeT110I CYCGRG 1 cut(s) 2768
BmgT120I GGNCC 6 cut(s) 506, 794, 1808, 2715, 2716, 2896
BmiI GGNNCC 5 cut(s) 1810, 2577, 2717, 2898, 2916
BmrFI CCNGG 1 cut(s) 1241
BmrI ACTGGG 2 cut(s) 205, 1390
BmsI GCATC 2 cut(s) 69, 1793
BmuI ACTGGG 2 cut(s) 205, 1390
BoxI GACNNNNGTC 1 cut(s) 2894
BpiI GAAGAC 4 cut(s) 1621, 2024, 2894, 3072
BpmI CTGGAG 1 cut(s) 1251
Bpu10I CCTNAGC 4 cut(s) 591, 677, 917, 2846
Bpu1102I GCTNAGC 1 cut(s) 1534
BpuEI CTTGAG 2 cut(s) 2056, 2974
BsaAI YACGTR 2 cut(s) 1173, 1518
BsaBI GATNNNNATC 4 cut(s) 1338, 1416, 1580, 3001
BsaI GGTCTC 1 cut(s) 1031
BsaJI CCNNGG 3 cut(s) 2380, 2892, 3050
BsaWI WCCGGW 2 cut(s) 730, 2578
BsaXI ACNNNNNCTCC 6 cut(s) 571, 601, 1887, 1899, 1917, 1929
Bsc4I CCNNNNNNNGG 6 cut(s) 41, 70, 596, 1382, 1796, 3056
Bse3DI GCAATG 3 cut(s) 966, 975, 1274
Bse8I GATNNNNATC 4 cut(s) 1338, 1416, 1580, 3001
BseAI TCCGGA 2 cut(s) 730, 2578
BseBI CCWGG 1 cut(s) 1241
BseDI CCNNGG 3 cut(s) 2380, 2892, 3050
BseGI GGATG 4 cut(s) 1784, 2134, 2224, 2949
BseJI GATNNNNATC 4 cut(s) 1338, 1416, 1580, 3001
BseLI CCNNNNNNNGG 6 cut(s) 41, 70, 596, 1382, 1796, 3056
BseMI GCAATG 3 cut(s) 966, 975, 1274
BseRI GAGGAG 4 cut(s) 934, 1494, 1812, 2540
BseSI GKGCMC 3 cut(s) 2120, 2719, 2828
BseXI GCAGC 4 cut(s) 80, 142, 1691, 2038
BseYI CCCAGC 2 cut(s) 20, 243
BsgI GTGCAG 1 cut(s) 2393
Bsh1236I CGCG 1 cut(s) 2894
BshFI GGCC 7 cut(s) 271, 795, 2359, 2717, 2795, 2807, 2851
BsiHKAI GWGCWC 2 cut(s) 1160, 2828
BsiHKCI CYCGRG 1 cut(s) 2768
BsiSI CCGG 3 cut(s) 731, 2579, 2658
BslFI GGGAC 3 cut(s) 212, 1794, 2882
BslI CCNNNNNNNGG 6 cut(s) 41, 70, 596, 1382, 1796, 3056
BsmAI GTCTC 5 cut(s) 554, 1031, 1973, 2436, 2771
BsmBI CGTCTC 1 cut(s) 2771
BsmFI GGGAC 3 cut(s) 212, 1794, 2882
BsmI GAATGC 3 cut(s) 1011, 1495, 1944
BsnI GGCC 7 cut(s) 271, 795, 2359, 2717, 2795, 2807, 2851
Bso31I GGTCTC 1 cut(s) 1031
BsoBI CYCGRG 1 cut(s) 2768
Bsp120I GGGCCC 1 cut(s) 2715
Bsp1286I GDGCHC 5 cut(s) 461, 1160, 2120, 2719, 2828
Bsp13I TCCGGA 2 cut(s) 730, 2578
Bsp1407I TGTACA 4 cut(s) 1482, 1881, 2434, 2977
Bsp1720I GCTNAGC 1 cut(s) 1534
Bsp19I CCATGG 1 cut(s) 3050
BspACI CCGC 5 cut(s) 1117, 1571, 1721, 2892, 2894
BspANI GGCC 7 cut(s) 271, 795, 2359, 2717, 2795, 2807, 2851
BspEI TCCGGA 2 cut(s) 730, 2578
BspFNI CGCG 1 cut(s) 2894
BspHI TCATGA 2 cut(s) 57, 1861
BspLI GGNNCC 5 cut(s) 1810, 2577, 2717, 2898, 2916
BspMAI CTGCAG 1 cut(s) 1050
BspMI ACCTGC 1 cut(s) 302
BspPI GGATC 9 cut(s) 766, 851, 946, 1734, 2019, 2063, 2766, 2909, 2922
BspTI CTTAAG 1 cut(s) 883
BspTNI GGTCTC 1 cut(s) 1031
BsrDI GCAATG 3 cut(s) 966, 975, 1274
BsrGI TGTACA 4 cut(s) 1482, 1881, 2434, 2977
BssECI CCNNGG 3 cut(s) 2380, 2892, 3050
BssSI CACGAG 2 cut(s) 418, 2411
BssT1I CCWWGG 2 cut(s) 2380, 3050
Bst2BI CACGAG 2 cut(s) 418, 2411
Bst2UI CCWGG 1 cut(s) 1241
Bst4CI ACNGT 7 cut(s) 583, 1289, 1555, 2249, 2277, 2627, 2930
Bst6I CTCTTC 3 cut(s) 138, 2325, 2517
BstAFI CTTAAG 1 cut(s) 883
BstAUI TGTACA 4 cut(s) 1482, 1881, 2434, 2977
BstBAI YACGTR 2 cut(s) 1173, 1518
BstC8I GCNNGC 4 cut(s) 902, 1237, 1495, 2876
BstDSI CCRYGG 2 cut(s) 2892, 3050
BstENI CCTNNNNNAGG 1 cut(s) 1794
BstF5I GGATG 4 cut(s) 1784, 2134, 2224, 2949
BstFNI CGCG 1 cut(s) 2894
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 1 cut(s) 124
BstMAI GTCTC 5 cut(s) 554, 1031, 1973, 2436, 2771
BstMWI GCNNNNNNNGC 4 cut(s) 17, 965, 2365, 2813
BstNI CCWGG 1 cut(s) 1241
BstNSI RCATGY 3 cut(s) 571, 1239, 2878
BstPAI GACNNNNGTC 1 cut(s) 2894
BstSCI CCNGG 1 cut(s) 1239
BstSFI CTRYAG 4 cut(s) 1046, 1428, 1830, 2623
BstSLI GKGCMC 3 cut(s) 2120, 2719, 2828
BstUI CGCG 1 cut(s) 2894
BstV1I GCAGC 4 cut(s) 80, 142, 1691, 2038
BstV2I GAAGAC 4 cut(s) 1621, 2024, 2894, 3072
BstX2I RGATCY 7 cut(s) 355, 771, 938, 982, 1739, 2011, 2914
BstXI CCANNNNNNTGG 2 cut(s) 782, 2803
BstYI RGATCY 7 cut(s) 355, 771, 938, 982, 1739, 2011, 2914
BsuI GTATCC 1 cut(s) 1405
BsuRI GGCC 7 cut(s) 271, 795, 2359, 2717, 2795, 2807, 2851
BtgI CCRYGG 2 cut(s) 2892, 3050
BtgZI GCGATG 1 cut(s) 2826
BtsCI GGATG 4 cut(s) 1784, 2134, 2224, 2949
BtsI GCAGTG 2 cut(s) 1114, 2133
BtsIMutI CAGTG 7 cut(s) 666, 717, 876, 1114, 1591, 2133, 2423
BveI ACCTGC 1 cut(s) 302
Cac8I GCNNGC 4 cut(s) 902, 1237, 1495, 2876
CciI TCATGA 2 cut(s) 57, 1861
CfoI GCGC 1 cut(s) 124
Cfr13I GGNCC 6 cut(s) 506, 794, 1808, 2715, 2716, 2896
Cfr42I CCGCGG 1 cut(s) 2895
CseI GACGC 2 cut(s) 2753, 3066
DraI TTTAAA 2 cut(s) 933, 2745
EaeI YGGCCR 2 cut(s) 2357, 2805
Eam1104I CTCTTC 3 cut(s) 138, 2325, 2517
EarI CTCTTC 3 cut(s) 138, 2325, 2517
Ecl136II GAGCTC 1 cut(s) 1158
Eco130I CCWWGG 2 cut(s) 2380, 3050
Eco147I AGGCCT 2 cut(s) 271, 2851
Eco24I GRGCYC 3 cut(s) 461, 1160, 2719
Eco31I GGTCTC 1 cut(s) 1031
Eco32I GATATC 1 cut(s) 2211
Eco47I GGWCC 3 cut(s) 506, 1808, 2896
Eco53kI GAGCTC 1 cut(s) 1158
Eco57I CTGAAG 5 cut(s) 168, 187, 1896, 2036, 2447
Eco88I CYCGRG 1 cut(s) 2768
EcoICRI GAGCTC 1 cut(s) 1158
EcoNI CCTNNNNNAGG 1 cut(s) 1794
EcoO109I RGGNCCY 2 cut(s) 794, 2716
EcoRII CCWGG 1 cut(s) 1239
EcoRV GATATC 1 cut(s) 2211
EcoT14I CCWWGG 2 cut(s) 2380, 3050
EcoT38I GRGCYC 3 cut(s) 461, 1160, 2719
ErhI CCWWGG 2 cut(s) 2380, 3050
Esp3I CGTCTC 1 cut(s) 2771
FalI AAGNNNNNCTT 2 cut(s) 2009, 2041
FaqI GGGAC 3 cut(s) 212, 1794, 2882
FbaI TGATCA 2 cut(s) 2907, 2968
FblI GTMKAC 3 cut(s) 210, 2109, 2622
Fnu4HI GCNGC 4 cut(s) 94, 156, 1680, 2052
FokI GGATG 4 cut(s) 1771, 2141, 2211, 2956
FriOI GRGCYC 3 cut(s) 461, 1160, 2719
Fsp4HI GCNGC 4 cut(s) 94, 156, 1680, 2052
FspBI CTAG 7 cut(s) 557, 672, 780, 807, 1745, 2381, 2919
GlaI GCGC 1 cut(s) 123
GluI GCNGC 4 cut(s) 94, 156, 1680, 2052
GsaI CCCAGC 2 cut(s) 24, 247
GsuI CTGGAG 1 cut(s) 1251
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 7 cut(s) 271, 795, 2359, 2717, 2795, 2807, 2851
HapII CCGG 3 cut(s) 731, 2579, 2658
HgaI GACGC 2 cut(s) 2753, 3066
HhaI GCGC 1 cut(s) 124
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HindIII AAGCTT 2 cut(s) 898, 2513
HpaI GTTAAC 1 cut(s) 610
HpaII CCGG 3 cut(s) 731, 2579, 2658
HphI GGTGA 5 cut(s) 88, 283, 1414, 2023, 2942
HpyCH4III ACNGT 7 cut(s) 583, 1289, 1555, 2249, 2277, 2627, 2930
HpyCH4IV ACGT 4 cut(s) 1172, 1191, 1517, 3097
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 965, 2365, 2813
HpySE526I ACGT 4 cut(s) 1172, 1191, 1517, 3097
HspAI GCGC 1 cut(s) 122
Kpn2I TCCGGA 2 cut(s) 730, 2578
Ksp22I TGATCA 2 cut(s) 2907, 2968
KspAI GTTAAC 1 cut(s) 610
KspI CCGCGG 1 cut(s) 2895
LmnI GCTCC 8 cut(s) 17, 308, 921, 1232, 1352, 1907, 2581, 2749
Lsp1109I GCAGC 4 cut(s) 80, 142, 1691, 2038
LweI GCATC 2 cut(s) 69, 1793
MaeI CTAG 7 cut(s) 557, 672, 780, 807, 1745, 2381, 2919
MaeII ACGT 4 cut(s) 1172, 1191, 1517, 3097
MaeIII GTNAC 3 cut(s) 707, 1729, 2567
MfeI CAATTG 2 cut(s) 1478, 2139
MflI RGATCY 7 cut(s) 355, 771, 938, 982, 1739, 2011, 2914
MhlI GDGCHC 5 cut(s) 461, 1160, 2120, 2719, 2828
MlsI TGGCCA 2 cut(s) 2359, 2807
MluNI TGGCCA 2 cut(s) 2359, 2807
MlyI GAGTC 2 cut(s) 1395, 1809
MmeI TCCRAC 5 cut(s) 450, 728, 1591, 1873, 1885
Mox20I TGGCCA 2 cut(s) 2359, 2807
MroI TCCGGA 2 cut(s) 730, 2578
MroXI GAANNNNTTC 1 cut(s) 1193
MscI TGGCCA 2 cut(s) 2359, 2807
MslI CAYNNNNRTG 4 cut(s) 71, 650, 2229, 2801
Msp20I TGGCCA 2 cut(s) 2359, 2807
MspA1I CMGCKG 1 cut(s) 2894
MspCI CTTAAG 1 cut(s) 883
MspI CCGG 3 cut(s) 731, 2579, 2658
MspR9I CCNGG 1 cut(s) 1241
MunI CAATTG 2 cut(s) 1478, 2139
Mva1269I GAATGC 3 cut(s) 1011, 1495, 1944
MvaI CCWGG 1 cut(s) 1241
MvnI CGCG 1 cut(s) 2894
MwoI GCNNNNNNNGC 4 cut(s) 17, 965, 2365, 2813
NcoI CCATGG 1 cut(s) 3050
NlaIV GGNNCC 5 cut(s) 1810, 2577, 2717, 2898, 2916
NspI RCATGY 3 cut(s) 571, 1239, 2878
OliI CACNNNNGTG 1 cut(s) 650
PaeI GCATGC 2 cut(s) 1239, 2878
PagI TCATGA 2 cut(s) 57, 1861
PaqCI CACCTGC 1 cut(s) 302
PceI AGGCCT 2 cut(s) 271, 2851
PciI ACATGT 1 cut(s) 567
PctI GAATGC 3 cut(s) 1011, 1495, 1944
PdmI GAANNNNTTC 1 cut(s) 1193
PfeI GAWTC 8 cut(s) 553, 619, 664, 751, 1750, 1849, 2417, 3017
PflMI CCANNNNNTGG 1 cut(s) 3056
PkrI GCNGC 4 cut(s) 95, 157, 1681, 2053
PleI GAGTC 2 cut(s) 1394, 1808
PpsI GAGTC 2 cut(s) 1394, 1808
Ppu21I YACGTR 2 cut(s) 1173, 1518
PscI ACATGT 1 cut(s) 567
PshAI GACNNNNGTC 1 cut(s) 2894
PshBI ATTAAT 1 cut(s) 911
Psp124BI GAGCTC 1 cut(s) 1160
Psp6I CCWGG 1 cut(s) 1239
PspFI CCCAGC 2 cut(s) 20, 243
PspGI CCWGG 1 cut(s) 1239
PspN4I GGNNCC 5 cut(s) 1810, 2577, 2717, 2898, 2916
PspOMI GGGCCC 1 cut(s) 2715
PspPI GGNCC 6 cut(s) 506, 794, 1808, 2715, 2716, 2896
PstI CTGCAG 1 cut(s) 1050
PsuI RGATCY 7 cut(s) 355, 771, 938, 982, 1739, 2011, 2914
RseI CAYNNNNRTG 4 cut(s) 71, 650, 2229, 2801
SacI GAGCTC 1 cut(s) 1160
SacII CCGCGG 1 cut(s) 2895
SatI GCNGC 4 cut(s) 94, 156, 1680, 2052
Sau96I GGNCC 6 cut(s) 506, 794, 1808, 2715, 2716, 2896
ScaI AGTACT 2 cut(s) 1052, 1271
SchI GAGTC 2 cut(s) 1395, 1809
ScrFI CCNGG 1 cut(s) 1241
SduI GDGCHC 5 cut(s) 461, 1160, 2120, 2719, 2828
SfaNI GCATC 2 cut(s) 69, 1793
SfcI CTRYAG 4 cut(s) 1046, 1428, 1830, 2623
Sfr303I CCGCGG 1 cut(s) 2895
SgrBI CCGCGG 1 cut(s) 2895
SinI GGWCC 3 cut(s) 506, 1808, 2896
SmiI ATTTAAAT 1 cut(s) 933
SmiMI CAYNNNNRTG 4 cut(s) 71, 650, 2229, 2801
SmlI CTYRAG 3 cut(s) 883, 2035, 2953
SmoI CTYRAG 3 cut(s) 883, 2035, 2953
SphI GCATGC 2 cut(s) 1239, 2878
SseBI AGGCCT 2 cut(s) 271, 2851
SsiI CCGC 5 cut(s) 1117, 1571, 1721, 2892, 2894
SspMI CTAG 7 cut(s) 557, 672, 780, 807, 1745, 2381, 2919
SstI GAGCTC 1 cut(s) 1160
StuI AGGCCT 2 cut(s) 271, 2851
StyD4I CCNGG 1 cut(s) 1239
StyI CCWWGG 2 cut(s) 2380, 3050
SwaI ATTTAAAT 1 cut(s) 933
TaaI ACNGT 7 cut(s) 583, 1289, 1555, 2249, 2277, 2627, 2930
TaiI ACGT 4 cut(s) 1175, 1194, 1520, 3100
TaqI TCGA 4 cut(s) 111, 768, 2680, 2995
TatI WGTACW 8 cut(s) 632, 1050, 1175, 1269, 1482, 1881, 2434, 2977
TfiI GAWTC 8 cut(s) 553, 619, 664, 751, 1750, 1849, 2417, 3017
TscAI CASTG 7 cut(s) 666, 724, 876, 1114, 1591, 2140, 2430
TseI GCWGC 4 cut(s) 93, 155, 1679, 2051
TspDTI ATGAA 7 cut(s) 17, 74, 986, 1748, 1924, 2211, 2687
TspGWI ACGGA 2 cut(s) 1633, 2851
TspRI CASTG 7 cut(s) 666, 724, 876, 1114, 1591, 2140, 2430
Van91I CCANNNNNTGG 1 cut(s) 3056
Vha464I CTTAAG 1 cut(s) 883
VneI GTGCAC 1 cut(s) 2824
VpaK11BI GGWCC 3 cut(s) 506, 1808, 2896
VspI ATTAAT 1 cut(s) 911
XagI CCTNNNNNAGG 1 cut(s) 1794
XapI RAATTY 4 cut(s) 601, 826, 1247, 2740
XbaI TCTAGA 1 cut(s) 556
XceI RCATGY 3 cut(s) 571, 1239, 2878
XmaJI CCTAGG 1 cut(s) 2380
XmiI GTMKAC 3 cut(s) 210, 2109, 2622
XmnI GAANNNNTTC 1 cut(s) 1193
XspI CTAG 7 cut(s) 557, 672, 780, 807, 1745, 2381, 2919
ZrmI AGTACT 2 cut(s) 1052, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.