RchiOBHm_Chr5g0012301

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8277962 .. 8287443
9482 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29288

Sequence Viewer

Length: 3030 bp
ATGCCAACTGGGTTGTGCAGAAAAATGGCAGAAGTTCTCGATAGTCAAAAACCCATCTTCTTTAGCTATGTTGCTGTGCTTGTTGTGCTTATTTGCGTTGTACCCATCAATTCTCAAGCACAATCTGGGACTCTTGCACCTGATGAAGTGGAAGCCCTTCGTGAAATAGCTGAACAACTGAATAAGAAGGACTGGAATTTCAGTGATCCATGTAGCAATGTTCCAACTTTTTCGAGCCCACATACTGATCAGTACAACAATACTCTTGTCTGCAATTGCTCATTCTCCGGCAATGTGTGTCACATTGAAAACATTAATCTTACTGCTCAGGATCTAGATGGTGTTCTTCCAGCATCACTGGCTAAGCTACCTTATCTTAAGCAAGTTAATCTGGGTCAGAATGATCTTAGTGGTTCGATTCCACGTGAATGGGCTTCTACCAAGTTGGAATTTCTGGTTCTCAGCGTGAACAACTTATCGGGACCTATCCCTGGCTATTTGGGAAACATAACTACTCTCCAAGTTTTGGCCTTGGAAAGCAACTTATTTTCTGGACCTGTTCCTTCCGACCTGGGAAAATTGACTAACATGGAGTTTCTCTATCTTCGTGCTAACAATCTCACTGGAGAGTTGCCTCTGGCTCTCACTAATCTGACCAAATTAAAAGTACTTCAGATAGGTAGTAACAACTTCACTGGAAGAATACCCAACTACTTTCAAAGTTGGAAAGACCTCCAAAGCTTAGAGATGCTAGCGAGTGGTCTTGAAGGGCCCCTTCCATCCAGTCTCTCTGCCTTAAAGAATATGACAGACATGAGGATTGGTGACTTAAGTGGTGAGAGTTCAGAATTTCCAAATTTATCAAACATGACAAACATGAAAAAACTGATGTTAAGGAGCTGCAATATAACAGGAGAAATCCCTGGATATATATCTACCATGACAAACCTGGTTGTTTTAGATCTAAGCTTCAACAGATTGGAAGGGGCCATTCCAAATTTTGCTAATATAATGCAGTTGTCAACAATATATTTGACAAGTAACTTGCTTACTGGGCTTCCAGACTGGATCAAAAGTAGAGATAGTCGCTACAATATCGATATCTCCTATAATAACTTCTCTCAGAGCTCTGTCCCAACTACTTGTCGAGAAACTTTCAATTGGTTCAGAAGTATTTCCCAACAGAACAACTCAATACTAAGCAATTGTCTCAACTCATGTTCAAAAGATCAGTACTCATTGCATATAAATTGTGGTGGAAAACAAACCAACATCGGAGGCATCAAGTATGAAGGAGATGAAGCCTCAGGAGGTGCAGCAACATTTGTGTCCACAACCCCCAATTGGGGGTTTAGTAGCACCGGTGATTTCGTAGATGCTTGGAGTTCTGACAACGACTATATTGCCAATAATGTTTCCATACTCAAAATGAACAAATCCGAATTGTACACAACTGCACGACTTTCTCCTCTTTCTCTCACCTACTATGCCCATTGCTTAGCAAATGGAAATTACACTGTGAAACTACACTTCGCAGAGATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGAATGTTTGATGTTTATATCCAGGACACACTAGTATTGAAGGATTTTGATATTACAAAGGAAGCACTAGGGGTTGATAAGGACGTGATCAAGGTATTTAAAGCAGTTGTTAATGTTAAGACTTTACTGATCCGCTTTCAGTGGGCTGGGAGAGGGACAACTAATGTTCCACTAAGAGGAAAATATGGTTCTCTTATATCAACCATCTCAGTGCAGTCTGATTTCAATCCTCCTGATGACAGCAAAAGGAAGATTTATATTGTGGTTGGAGTTGTTTCAGCTCTATGCCTTATCTTCTTAATTTTTGGCATTCTTTGGTTAAGAGGCTGTTTCGGACACAAGACAACCAGGGAAGAAGAATTGAGAGGATTGAATCTGCACACTGGTTTCTTTAGATTCAAACAAATTAAAGCTGCTACTAACAACTTTAATGCTGCAAATAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGTGAATTATTGGATGGTAGTTTTATTGCCGTTAAGCAACTTTCTTCAAAATCAAAGCAGGGAAATCGTGAATTTGTGAATGAAATAGGCATGATGTCTGCATTACAACACCCAAATCTTGTTAAACTGTATGGATGTTGCACGGAAGGAAATCAGTTATTCTTGGTCTACGAATACATGGAGAACAATAGCCTATCACATACTTTATTTGGTTCGGAGGACGGCCTACGGAAATTGGACTGGCCTACAAGGCAGAAAATATGTGTTGGTATTGCAAGGGGTCTTGCTTTCCTGCATGATGGAACTTTGAAAATCGTTCATAGAGATATCAAACCAACCAACATATTGCTGGATAGGGACCTTAATGCTAAGATAGCGGACTTTGGTTTGGCTAAGCTGGACGAAGAGGAGCAAACCCATATTAGCACCAGAGTTGCTGGAACTATAGGATACATGGCGCCAGAGTATGCTTTATGGGGCTATTTAACCGATAAGGCAGATGTATACAGTTTTGGTGTTGTAGCATTGGAACTGGTATCAGGGAAAAACAACATCAAATATCGGCCAAATGAAAATTTTGTATGCCTTCTAGATTGGGCCCTTGTTTTACAACAAAAAGGAAATCTAATGGAGCTGGTGGATCCAAAGTTGGGTTCTGGGTTCAACAAGGAAGAGGCACTTAGAATGATAAGGGTAGCTCTACTATGCGCCAATTCATCACCGGCACTAAGACCCACGATGTCTGAAGTAGTGAGCATGCTTGAAGGCCGAACTGTTGTTCATGAAGTGACCATAAATCCAAGTATTTATGGTGATGAAATGAGGTTTAAGGCCTTTACAGAGGACTCTGATCCGAATATGCAAGAGAGCTTTGAGGAGACTCGAAGCTTCTTTCACTCCGATTCAAAACGGACAGCCTCTTATTCATCGTCAGTCCTGAATATTGATACAGTTAAACCTGGGACCCGATAA

Protein Analysis

1009

Amino Acids

111.96

Weight (kDa)

6.23

Isoelectric Point (pI)

35.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 164 - 346 1.4e-10 Leucine-rich repeat region
Malectin PF11721 413 - 596 2.8e-37 Malectin domain
Pkinase PF00069 671 - 937 7.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 673 - 939 1.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2515
AccB7I CCANNNNNTGG 1 cut(s) 526
AccI GTMKAC 2 cut(s) 2226, 2562
AciI CCGC 2 cut(s) 1714, 2435
AclWI GGATC 7 cut(s) 200, 339, 1076, 1705, 2693, 2706, 2903
AcoI YGGCCR 1 cut(s) 2621
AcsI RAATTY 7 cut(s) 196, 449, 848, 856, 997, 2129, 2632
AcuI CTGAAG 2 cut(s) 656, 2823
AcvI CACGTG 1 cut(s) 425
AcyI GRCGYC 1 cut(s) 2516
AfaI GTAC 5 cut(s) 102, 254, 669, 1235, 1448
AfiI CCNNNNNNNGG 8 cut(s) 491, 526, 1344, 1345, 1346, 1347, 1757, 2708
AflII CTTAAG 2 cut(s) 377, 829
AgeI ACCGGT 1 cut(s) 1361
AhdI GACNNNNNGTC 1 cut(s) 1558
AhlI ACTAGT 1 cut(s) 1612
AjiI CACGTC 1 cut(s) 1666
AjnI CCWGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
AjuI GAANNNNNNNTTGG 4 cut(s) 2025, 2057, 2695, 2727
Alw21I GWGCWC 1 cut(s) 1130
Alw26I GTCTC 4 cut(s) 791, 1214, 1545, 2930
AlwI GGATC 7 cut(s) 200, 339, 1076, 1705, 2693, 2706, 2903
AoxI GGCC 9 cut(s) 528, 770, 987, 2281, 2300, 2621, 2655, 2824, 2889
ApaI GGGCCC 2 cut(s) 774, 2659
ApeKI GCWGC 4 cut(s) 900, 1316, 1994, 2015
ApoI RAATTY 7 cut(s) 196, 449, 848, 856, 997, 2129, 2632
AseI ATTAAT 1 cut(s) 315
AsiGI ACCGGT 1 cut(s) 1361
Asp700I GAANNNNTTC 2 cut(s) 156, 1174
AspLEI GCGC 2 cut(s) 2518, 2768
AspS9I GGNCC 9 cut(s) 482, 554, 770, 771, 987, 2416, 2655, 2656, 3021
AsuHPI GGTGA 7 cut(s) 836, 848, 1376, 1471, 2072, 2769, 2882
AsuNHI GCTAGC 1 cut(s) 751
AvaII GGWCC 4 cut(s) 482, 554, 2416, 3021
AxyI CCTNAGG 1 cut(s) 1306
BaeGI GKGCMC 2 cut(s) 774, 2659
BamHI GGATCC 1 cut(s) 2698
BanI GGYRCC 1 cut(s) 2515
BanII GRGCYC 4 cut(s) 239, 774, 1130, 2659
BbrPI CACGTG 1 cut(s) 425
BbsI GAAGAC 1 cut(s) 1585
Bbv12I GWGCWC 1 cut(s) 1130
BbvI GCAGC 4 cut(s) 887, 1328, 1981, 2002
BccI CCATC 7 cut(s) 62, 113, 332, 787, 1793, 2066, 2351
BceAI ACGGC 2 cut(s) 2072, 2296
BcgI CGANNNNNNTGC 4 cut(s) 1385, 1419, 2105, 2139
BciT130I CCWGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
BciVI GTATCC 1 cut(s) 2501
BclI TGATCA 2 cut(s) 247, 1668
BcoDI GTCTC 4 cut(s) 791, 1214, 1545, 2930
BcuI ACTAGT 1 cut(s) 1612
BfaI CTAG 5 cut(s) 335, 752, 1613, 1649, 2648
BfmI CTRYAG 1 cut(s) 2502
BfoI RGCGCY 1 cut(s) 2519
BfrI CTTAAG 2 cut(s) 377, 829
BfuI GTATCC 1 cut(s) 2501
BglI GCCNNNNNGGC 1 cut(s) 2308
BglII AGATCT 1 cut(s) 961
BisI GCNGC 4 cut(s) 901, 1317, 1995, 2016
BlpI GCTNAGC 3 cut(s) 363, 1498, 2451
BlsI GCNGC 4 cut(s) 902, 1318, 1996, 2017
BmcAI AGTACT 2 cut(s) 669, 1235
Bme1390I CCNGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
Bme18I GGWCC 4 cut(s) 482, 554, 2416, 3021
BmeRI GACNNNNNGTC 1 cut(s) 1558
BmgBI CACGTC 1 cut(s) 1666
BmgT120I GGNCC 9 cut(s) 482, 554, 770, 771, 987, 2416, 2655, 2656, 3021
BmrFI CCNGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
BmrI ACTGGG 2 cut(s) 18, 1062
BmsI GCATC 4 cut(s) 362, 738, 1290, 1366
BmtI GCTAGC 1 cut(s) 755
BmuI ACTGGG 2 cut(s) 18, 1062
BpiI GAAGAC 1 cut(s) 1585
BpmI CTGGAG 1 cut(s) 645
Bpu10I CCTNAGC 1 cut(s) 327
Bpu1102I GCTNAGC 3 cut(s) 363, 1498, 2451
BpuEI CTTGAG 1 cut(s) 99
Bsa29I ATCGAT 1 cut(s) 1098
BsaAI YACGTR 1 cut(s) 425
BsaBI GATNNNNATC 2 cut(s) 931, 1806
BsaHI GRCGYC 1 cut(s) 2516
BsaJI CCNNGG 6 cut(s) 490, 531, 571, 922, 1929, 3017
BsaWI WCCGGW 1 cut(s) 1361
Bsc4I CCNNNNNNNGG 8 cut(s) 491, 526, 1344, 1345, 1346, 1347, 1757, 2708
Bse118I RCCGGY 2 cut(s) 1361, 2779
Bse21I CCTNAGG 1 cut(s) 1306
Bse3DI GCAATG 4 cut(s) 223, 298, 1238, 1492
Bse8I GATNNNNATC 2 cut(s) 931, 1806
BseBI CCWGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
BseCI ATCGAT 1 cut(s) 1098
BseDI CCNNGG 6 cut(s) 490, 531, 571, 922, 1929, 3017
BseGI GGATG 3 cut(s) 779, 2077, 2198
BseJI GATNNNNATC 2 cut(s) 931, 1806
BseLI CCNNNNNNNGG 8 cut(s) 491, 526, 1344, 1345, 1346, 1347, 1757, 2708
BseMI GCAATG 4 cut(s) 223, 298, 1238, 1492
BseMII CTCAG 6 cut(s) 341, 475, 1136, 1320, 1561, 1803
BseRI GAGGAG 3 cut(s) 1458, 2480, 2948
BseSI GKGCMC 2 cut(s) 774, 2659
BseXI GCAGC 4 cut(s) 887, 1328, 1981, 2002
BseYI CCCAGC 1 cut(s) 1727
BsgI GTGCAG 5 cut(s) 37, 1335, 1440, 1814, 1943
BshFI GGCC 9 cut(s) 530, 772, 989, 2283, 2302, 2623, 2657, 2826, 2891
BshNI GGYRCC 1 cut(s) 2515
BshTI ACCGGT 1 cut(s) 1361
BshVI ATCGAT 1 cut(s) 1098
BsiHKAI GWGCWC 1 cut(s) 1130
BsiSI CCGG 3 cut(s) 288, 1362, 2780
BslFI GGGAC 5 cut(s) 142, 495, 1118, 1750, 2429
BslI CCNNNNNNNGG 8 cut(s) 491, 526, 1344, 1345, 1346, 1347, 1757, 2708
BsmAI GTCTC 4 cut(s) 791, 1214, 1545, 2930
BsmFI GGGAC 5 cut(s) 142, 495, 1118, 1750, 2429
BsmI GAATGC 1 cut(s) 1890
BsnI GGCC 9 cut(s) 530, 772, 989, 2283, 2302, 2623, 2657, 2826, 2891
Bsp120I GGGCCC 2 cut(s) 770, 2655
Bsp1286I GDGCHC 4 cut(s) 239, 774, 1130, 2659
Bsp1407I TGTACA 1 cut(s) 1446
Bsp1720I GCTNAGC 3 cut(s) 363, 1498, 2451
BspACI CCGC 2 cut(s) 1714, 2435
BspANI GGCC 9 cut(s) 530, 772, 989, 2283, 2302, 2623, 2657, 2826, 2891
BspCNI CTCAG 6 cut(s) 340, 474, 1135, 1319, 1560, 1802
BspDI ATCGAT 1 cut(s) 1098
BspHI TCATGA 1 cut(s) 2839
BspOI GCTAGC 1 cut(s) 755
BspPI GGATC 7 cut(s) 200, 339, 1076, 1705, 2693, 2706, 2903
BspT107I GGYRCC 1 cut(s) 2515
BspTI CTTAAG 2 cut(s) 377, 829
BsrDI GCAATG 4 cut(s) 223, 298, 1238, 1492
BsrFI RCCGGY 2 cut(s) 1361, 2779
BsrGI TGTACA 1 cut(s) 1446
BssAI RCCGGY 2 cut(s) 1361, 2779
BssECI CCNNGG 6 cut(s) 490, 531, 571, 922, 1929, 3017
BssNAI GTATAC 1 cut(s) 2563
BssNI GRCGYC 1 cut(s) 2516
BssT1I CCWWGG 1 cut(s) 531
Bst1107I GTATAC 1 cut(s) 2563
Bst2UI CCWGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
Bst4CI ACNGT 5 cut(s) 1519, 2187, 2567, 2833, 3010
Bst6I CTCTTC 2 cut(s) 2457, 2724
BstACI GRCGYC 1 cut(s) 2516
BstAFI CTTAAG 2 cut(s) 377, 829
BstAUI TGTACA 1 cut(s) 1446
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 2 cut(s) 753, 2816
BstF5I GGATG 3 cut(s) 779, 2077, 2198
BstH2I RGCGCY 1 cut(s) 2519
BstHHI GCGC 2 cut(s) 2518, 2768
BstMAI GTCTC 4 cut(s) 791, 1214, 1545, 2930
BstMWI GCNNNNNNNGC 5 cut(s) 85, 359, 1054, 2308, 2432
BstNI CCWGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
BstNSI RCATGY 1 cut(s) 2818
BstSCI CCNGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
BstSFI CTRYAG 1 cut(s) 2502
BstSLI GKGCMC 2 cut(s) 774, 2659
BstV1I GCAGC 4 cut(s) 887, 1328, 1981, 2002
BstV2I GAAGAC 1 cut(s) 1585
BstX2I RGATCY 3 cut(s) 331, 961, 2698
BstXI CCANNNNNNTGG 1 cut(s) 429
BstYI RGATCY 3 cut(s) 331, 961, 2698
BstZ17I GTATAC 1 cut(s) 2563
Bsu15I ATCGAT 1 cut(s) 1098
Bsu36I CCTNAGG 1 cut(s) 1306
BsuI GTATCC 1 cut(s) 2501
BsuRI GGCC 9 cut(s) 530, 772, 989, 2283, 2302, 2623, 2657, 2826, 2891
BsuTUI ATCGAT 1 cut(s) 1098
BtrI CACGTC 1 cut(s) 1666
BtsCI GGATG 3 cut(s) 779, 2077, 2198
BtsIMutI CAGTG 8 cut(s) 208, 356, 621, 693, 1515, 1727, 1797, 1962
Cac8I GCNNGC 2 cut(s) 753, 2816
CciI TCATGA 1 cut(s) 2839
CfoI GCGC 2 cut(s) 2518, 2768
Cfr10I RCCGGY 2 cut(s) 1361, 2779
Cfr13I GGNCC 9 cut(s) 482, 554, 770, 771, 987, 2416, 2655, 2656, 3021
ClaI ATCGAT 1 cut(s) 1098
CsiI ACCWGGT 1 cut(s) 948
Csp6I GTAC 5 cut(s) 101, 253, 668, 1234, 1447
CspAI ACCGGT 1 cut(s) 1361
CviQI GTAC 5 cut(s) 101, 253, 668, 1234, 1447
DinI GGCGCC 1 cut(s) 2517
DraI TTTAAA 1 cut(s) 1681
DriI GACNNNNNGTC 1 cut(s) 1558
EaeI YGGCCR 1 cut(s) 2621
Eam1104I CTCTTC 2 cut(s) 2457, 2724
Eam1105I GACNNNNNGTC 1 cut(s) 1558
EarI CTCTTC 2 cut(s) 2457, 2724
Ecl136II GAGCTC 1 cut(s) 1128
Eco130I CCWWGG 1 cut(s) 531
Eco147I AGGCCT 1 cut(s) 2891
Eco24I GRGCYC 4 cut(s) 239, 774, 1130, 2659
Eco32I GATATC 2 cut(s) 1102, 2386
Eco47I GGWCC 4 cut(s) 482, 554, 2416, 3021
Eco53kI GAGCTC 1 cut(s) 1128
Eco57I CTGAAG 2 cut(s) 656, 2823
Eco72I CACGTG 1 cut(s) 425
Eco81I CCTNAGG 1 cut(s) 1306
EcoICRI GAGCTC 1 cut(s) 1128
EcoO109I RGGNCCY 6 cut(s) 482, 770, 771, 2416, 2656, 3021
EcoRII CCWGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
EcoRV GATATC 2 cut(s) 1102, 2386
EcoT14I CCWWGG 1 cut(s) 531
EcoT38I GRGCYC 4 cut(s) 239, 774, 1130, 2659
EgeI GGCGCC 1 cut(s) 2517
EheI GGCGCC 1 cut(s) 2517
ErhI CCWWGG 1 cut(s) 531
FalI AAGNNNNNCTT 4 cut(s) 759, 791, 2721, 2753
FaqI GGGAC 5 cut(s) 142, 495, 1118, 1750, 2429
FbaI TGATCA 2 cut(s) 247, 1668
FblI GTMKAC 2 cut(s) 2226, 2562
Fnu4HI GCNGC 4 cut(s) 901, 1317, 1995, 2016
FokI GGATG 3 cut(s) 766, 2084, 2205
FriOI GRGCYC 4 cut(s) 239, 774, 1130, 2659
Fsp4HI GCNGC 4 cut(s) 901, 1317, 1995, 2016
FspBI CTAG 5 cut(s) 335, 752, 1613, 1649, 2648
GlaI GCGC 2 cut(s) 2517, 2767
GluI GCNGC 4 cut(s) 901, 1317, 1995, 2016
GsaI CCCAGC 1 cut(s) 1731
GsuI CTGGAG 1 cut(s) 645
HaeII RGCGCY 1 cut(s) 2519
HaeIII GGCC 9 cut(s) 530, 772, 989, 2283, 2302, 2623, 2657, 2826, 2891
HapII CCGG 3 cut(s) 288, 1362, 2780
HhaI GCGC 2 cut(s) 2518, 2768
Hin1I GRCGYC 1 cut(s) 2516
Hin6I GCGC 2 cut(s) 2516, 2766
HinP1I GCGC 2 cut(s) 2516, 2766
HincII GTYRAC 1 cut(s) 1023
HindII GTYRAC 1 cut(s) 1023
HindIII AAGCTT 4 cut(s) 739, 967, 2024, 2944
HinfI GANTC 7 cut(s) 130, 418, 1954, 1977, 2903, 2938, 2960
HpaII CCGG 3 cut(s) 288, 1362, 2780
HphI GGTGA 7 cut(s) 836, 848, 1376, 1471, 2072, 2769, 2882
Hpy166II GTNNAC 7 cut(s) 469, 1023, 1332, 1449, 2053, 2227, 2563
Hpy8I GTNNAC 7 cut(s) 469, 1023, 1332, 1449, 2053, 2227, 2563
HpyCH4III ACNGT 5 cut(s) 1519, 2187, 2567, 2833, 3010
HpyCH4IV ACGT 2 cut(s) 424, 1665
HpyF10VI GCNNNNNNNGC 5 cut(s) 85, 359, 1054, 2308, 2432
HpySE526I ACGT 2 cut(s) 424, 1665
Hsp92I GRCGYC 1 cut(s) 2516
HspAI GCGC 2 cut(s) 2516, 2766
KasI GGCGCC 1 cut(s) 2515
KflI GGGWCCC 1 cut(s) 3021
Ksp22I TGATCA 2 cut(s) 247, 1668
LmnI GCTCC 4 cut(s) 897, 2045, 2467, 2689
Lsp1109I GCAGC 4 cut(s) 887, 1328, 1981, 2002
LweI GCATC 4 cut(s) 362, 738, 1290, 1366
MabI ACCWGGT 1 cut(s) 948
MaeI CTAG 5 cut(s) 335, 752, 1613, 1649, 2648
MaeII ACGT 2 cut(s) 424, 1665
MaeIII GTNAC 5 cut(s) 299, 683, 824, 1040, 2845
MfeI CAATTG 4 cut(s) 274, 1159, 1204, 1342
MflI RGATCY 3 cut(s) 331, 961, 2698
MhlI GDGCHC 4 cut(s) 239, 774, 1130, 2659
Mly113I GGCGCC 1 cut(s) 2516
MlyI GAGTC 3 cut(s) 124, 2897, 2932
MmeI TCCRAC 6 cut(s) 248, 426, 591, 704, 1555, 1828
MroXI GAANNNNTTC 2 cut(s) 156, 1174
MslI CAYNNNNRTG 2 cut(s) 427, 1790
MspCI CTTAAG 2 cut(s) 377, 829
MspI CCGG 3 cut(s) 288, 1362, 2780
MspR9I CCNGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
MunI CAATTG 4 cut(s) 274, 1159, 1204, 1342
Mva1269I GAATGC 1 cut(s) 1890
MvaI CCWGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
MwoI GCNNNNNNNGC 5 cut(s) 85, 359, 1054, 2308, 2432
NarI GGCGCC 1 cut(s) 2516
NheI GCTAGC 1 cut(s) 751
NmuCI GTSAC 3 cut(s) 299, 824, 2845
NspI RCATGY 1 cut(s) 2818
PaeI GCATGC 1 cut(s) 2818
PagI TCATGA 1 cut(s) 2839
PceI AGGCCT 1 cut(s) 2891
PctI GAATGC 1 cut(s) 1890
PdmI GAANNNNTTC 2 cut(s) 156, 1174
PfeI GAWTC 4 cut(s) 418, 1954, 1977, 2960
PflMI CCANNNNNTGG 1 cut(s) 526
PfoI TCCNGGA 1 cut(s) 1602
PinAI ACCGGT 1 cut(s) 1361
PkrI GCNGC 4 cut(s) 902, 1318, 1996, 2017
PleI GAGTC 3 cut(s) 124, 2897, 2932
PluTI GGCGCC 1 cut(s) 2519
PmaCI CACGTG 1 cut(s) 425
PmlI CACGTG 1 cut(s) 425
PpsI GAGTC 3 cut(s) 124, 2897, 2932
Ppu21I YACGTR 1 cut(s) 425
PpuMI RGGWCCY 3 cut(s) 482, 2416, 3021
PshBI ATTAAT 1 cut(s) 315
Psp124BI GAGCTC 1 cut(s) 1130
Psp5II RGGWCCY 3 cut(s) 482, 2416, 3021
Psp6I CCWGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
PspCI CACGTG 1 cut(s) 425
PspFI CCCAGC 1 cut(s) 1727
PspGI CCWGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
PspOMI GGGCCC 2 cut(s) 770, 2655
PspPI GGNCC 9 cut(s) 482, 554, 770, 771, 987, 2416, 2655, 2656, 3021
PspPPI RGGWCCY 3 cut(s) 482, 2416, 3021
PsuI RGATCY 3 cut(s) 331, 961, 2698
RsaI GTAC 5 cut(s) 102, 254, 669, 1235, 1448
RsaNI GTAC 5 cut(s) 101, 253, 668, 1234, 1447
RseI CAYNNNNRTG 2 cut(s) 427, 1790
SacI GAGCTC 1 cut(s) 1130
SatI GCNGC 4 cut(s) 901, 1317, 1995, 2016
Sau96I GGNCC 9 cut(s) 482, 554, 770, 771, 987, 2416, 2655, 2656, 3021
ScaI AGTACT 2 cut(s) 669, 1235
SchI GAGTC 3 cut(s) 124, 2897, 2932
ScrFI CCNGG 7 cut(s) 492, 572, 924, 950, 1604, 1930, 3018
SduI GDGCHC 4 cut(s) 239, 774, 1130, 2659
SexAI ACCWGGT 1 cut(s) 948
SfaNI GCATC 4 cut(s) 362, 738, 1290, 1366
SfcI CTRYAG 1 cut(s) 2502
SfoI GGCGCC 1 cut(s) 2517
SgrAI CRCCGGYG 1 cut(s) 1361
SinI GGWCC 4 cut(s) 482, 554, 2416, 3021
SmiMI CAYNNNNRTG 2 cut(s) 427, 1790
SmlI CTYRAG 3 cut(s) 114, 377, 829
SmoI CTYRAG 3 cut(s) 114, 377, 829
SpeI ACTAGT 1 cut(s) 1612
SphI GCATGC 1 cut(s) 2818
SseBI AGGCCT 1 cut(s) 2891
SsiI CCGC 2 cut(s) 1714, 2435
SspDI GGCGCC 1 cut(s) 2515
SspI AATATT 1 cut(s) 3001
SspMI CTAG 5 cut(s) 335, 752, 1613, 1649, 2648
SstI GAGCTC 1 cut(s) 1130
StuI AGGCCT 1 cut(s) 2891
StyD4I CCNGG 7 cut(s) 490, 570, 922, 948, 1602, 1928, 3016
StyI CCWWGG 1 cut(s) 531
TaaI ACNGT 5 cut(s) 1519, 2187, 2567, 2833, 3010
TaiI ACGT 2 cut(s) 427, 1668
TaqI TCGA 6 cut(s) 39, 233, 416, 1098, 1147, 2941
TatI WGTACW 4 cut(s) 252, 667, 1233, 1446
TfiI GAWTC 4 cut(s) 418, 1954, 1977, 2960
TscAI CASTG 8 cut(s) 208, 363, 628, 700, 1522, 1727, 1797, 1969
TseFI GTSAC 3 cut(s) 299, 824, 2845
TseI GCWGC 4 cut(s) 900, 1316, 1994, 2015
Tsp45I GTSAC 3 cut(s) 299, 824, 2845
TspGWI ACGGA 3 cut(s) 2216, 2302, 2983
TspRI CASTG 8 cut(s) 208, 363, 628, 700, 1522, 1727, 1797, 1969
Van91I CCANNNNNTGG 1 cut(s) 526
Vha464I CTTAAG 2 cut(s) 377, 829
VpaK11BI GGWCC 4 cut(s) 482, 554, 2416, 3021
VspI ATTAAT 1 cut(s) 315
XapI RAATTY 7 cut(s) 196, 449, 848, 856, 997, 2129, 2632
XbaI TCTAGA 2 cut(s) 334, 2647
XceI RCATGY 1 cut(s) 2818
XcmI CCANNNNNNNNNTGG 2 cut(s) 946, 2404
XmiI GTMKAC 2 cut(s) 2226, 2562
XmnI GAANNNNTTC 2 cut(s) 156, 1174
XspI CTAG 5 cut(s) 335, 752, 1613, 1649, 2648
ZrmI AGTACT 2 cut(s) 669, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.