Rw0G004700

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00177
Physical Location & Seq
Forward (+)
13998 .. 21948
7951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G004700.1

Sequence Viewer

Length: 2937 bp
ATGAAGATGGCAAGTAGAGATAAGATGATCATGATGCTCATGATATTGGTTTTCTGCTTCATATGCATAAACTCGGTCAAAGTTGAAGCACAGTCTGCAACTCTTGTTGCTTCAGAAGTGGAAGCTCTGAAAGAAATAGCTACACAAATAGGAAAGAAAGATTGGAACTTTAGCATCGACCCTTGCAGCAATCACACGACCTGGGCCACTCCAAAATCTACTGCCAGGCCTCTGTTCAACAACACCGTCACCTGCGACTGCTCCTTCTCTGATGGTGCATGCCACGTCACCAGCATCTTTCTTACAGGGCAAGACCTTGCTGGTGTGCTTCCACCGTCTATTGAAAAGTTACCCTACCTGATAAATGTCGATTTCTCGTGGAACTACCTCAATGGCAGCATACCGCGAGAATTACAATGCAGGTCCCTTATTGTGAACAACTTATCAGGACCAATCCCGAGCTATTTGGGAAACATTACCACTCTAACATATCTGAGCATAGAGAATAACATGTTCTCAGGAACTGTTCCTCCTGAGCTTGGAAACTTGGTTAACTTGCGGAATCTGATTAGCAGCAACAACTTCACTGGAAGAATGCCTGACATTTTTGAAAGTTGGAATCAACTTCAGAAATTAGAGATCCAAGCTAGTGGTCTAGAAGGCCCCATTCCATCTAGCATTTCTGTCTTGAGTAATTTAACAGAACTAATGATCAGTGGCTTAAACGGAGGGGGTTCAGTATTTCCAAACTTGAGGAATATGATGAGCTTGCAAAGATTAATGCTCAGGAGCTGTAATTTATCTGGACCTATTCCTTCCTATTTATCAGCAATGTCACGGTTAAAAATATTAGATCTAAGCTTCAACAGATTAGTGGGGAGCATTCCTGATTTGGCAGATCTGACATCCTTGCAGAACTTGTATCTAACAAGCAACTTGCTTACTGGATCTATTCCAGAGTGGATCAAGAGCAGAGATCGCTGCGAGATAGATGTTTCTTACAATAATTTTTCTGAGAGCTCTGAACCACCTTCTTGTACAGAAACCCTGAACGTGTTCAAAAGCTTTTCTGCACGTGATAGCTCATTATATGCGGAGTGCCTGAAGAGCTCTCCATGTCCAAAAGATCAGTACTCATTGCATATCAATTGTGGTGGTAAAGCAACCACCATTGGAGAAATCATGTTTGAAGCGGATCAAAACCCAGGAGGTGCAGCACATTTTGTTCCTTCTGGGCCTAGCTGGGGATTCAGTAGCACTGGACATTTCTGGGATCTTGACAGCACCTCTACATACTACGTGGAGTACGTACCAACTAATGTATCTATACTCAGGATGGACAACTCTGAGTTGTACACAGATGCACGCCTCTCTCCTCTTTCTCTCACGTATTATGGACGCTGCTTCGGCAGTGGAAATTATACTGTGAAGCTTTACTTTTCGGAGATTATTATCAGAGGCAATAGATCTTTTTCTAGTCTTGGAAGACGGATCTTCGATGTTTATATTCAGGAGAAGCTAGTGTTGAAGGATTTCGACATTGAAAAGGATGCCCAAGGGGTTGATAAGGCAGTCATCAGGGAATTCAAAGCAGTTGAGGTTAAGAAGAAAACTTTAGAGATCCGATTTCATTGGTCTGGGAAAGGGAAAACAGCTTCCCCAAAGAGAGGAGTATATGGTCCCCTTATTTCAGCTATCTCTATAGAATCAGAGTTCAAGCCTCCTCATGATAGCAAGACATGGGTATTTATTGTGGTGGGAGCTACGGTTTTGTGCCTCATTCTGTTGATTTTAAGCATTCTTTGGTGGAGAGGCTGTCTGGATAAGAAGACATCAAGAGAAGAAGCTCTGAGAGGACTGGATCTGCAAACTGGCTTTTTCACCTTCAAGCAAATAAAAGCTGCCACTAATAACTTTGATCCTGTAAACAAAATTGGGGAAGGTGGTTTTGGATCTGTGTACAAGGGAATACTACTGGATGGTACTATAATTGCAGTAAAGCAATTATCTGCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTACAGCATCCAAATGTCGTGAGATTGTATGGATGTTGTATTGAAGCAAATCAGTTACTTTTGGTATATGAATACATGGATAACAATAGCCTTGCACATGCTTTGTTTGGTCCAGAGGGAGGTCTGGACTGGCCTACGAGGCAGAAAATATGCATAGGCATAGCAAAAGGTCTGGCATTTTTGCATGAGGAATCAGCACTGAAGGTTGTCCACAGAGATATTAAATCTACGAATGTATTACTGGACCAAGACCTTAACGCTAAGATCTCAGACTTTGGTCTGGCCAAGCTTGACGAAGAGAATACCCACATTAGCACCACAGTTGCCGGAACTGTAGGATACATGGCGCCTGAATATGCACTATGGGGTTATTTAACATACAAAGCAGATGTATACAGTTTTGGTGTTGTCGCATTGGAAATTGTTGTTGGAAAGAACAACATGAAATTTCGAGCAGATGAGAACTTTGTAGGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATCTAATGGAGCTGGTGGATCCAAGGCTGGGGTCCGATTTCAGCAAGGAAGAGGCAATTAGAATGGTCAAAGTAGCTCTGCTATGCACCAATCCGGCACCAGCACTTAGGCCTACGATGTCTGCAGTAGTGAGTATGCTTGAAGGGAGGAGCGTTGTTCCTGAATTGATTATGGATCCAAGTATCTATGGTGATGAGACGAGGTTGACAGGCTTGAGGGACCGGTTTGAGAAGTTTGCAGCAGAAGACAGCTCATCAAGTGGAACTCAGAGCCTCTTGCGTGGATCAGATGCAACATCGATTGGTTGTTCTGCTACTGCTACATCTTCAGATCTCTACAAAGTTAGTCCTACTTCTTAG

Protein Analysis

978

Amino Acids

107.78

Weight (kDa)

5.9

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 154 - 324 5.4e-09 Leucine-rich repeat region
LRR_8 PF13855 256 - 314 5e-06 Leucine rich repeat
Malectin PF11721 379 - 566 1.3e-35 Malectin domain
Pkinase PF00069 642 - 902 1.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 643 - 905 9.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
Acc36I ACCTGC 2 cut(s) 260, 411
AccB1I GGYRCC 2 cut(s) 2413, 2674
AccI GTMKAC 1 cut(s) 2460
AccII CGCG 1 cut(s) 406
AciI CCGC 4 cut(s) 404, 559, 1094, 1193
AcoI YGGCCR 1 cut(s) 2349
AcsI RAATTY 3 cut(s) 1583, 2036, 2513
AcuI CTGAAG 5 cut(s) 96, 611, 1124, 2288, 2889
AcvI CACGTG 1 cut(s) 1076
AcyI GRCGYC 1 cut(s) 2414
AfaI GTAC 7 cut(s) 1039, 1133, 1307, 1311, 1355, 1961, 1984
AfiI CCNNNNNNNGG 5 cut(s) 539, 1244, 1667, 2186, 2606
AflIII ACRYGT 2 cut(s) 510, 1053
AgeI ACCGGT 1 cut(s) 2799
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 3 cut(s) 200, 224, 1204
AjuI GAANNNNNNNTTGG 6 cut(s) 145, 177, 1932, 1964, 2478, 2510
AloI GAACNNNNNNTCC 2 cut(s) 514, 546
Alw21I GWGCWC 2 cut(s) 1022, 1112
Alw26I GTCTC 1 cut(s) 2768
AlwNI CAGNNNCTG 2 cut(s) 524, 792
Ama87I CYCGRG 1 cut(s) 457
AoxI GGCC 9 cut(s) 204, 227, 661, 1235, 2198, 2349, 2539, 2553, 2687
ApaI GGGCCC 1 cut(s) 2557
ApeKI GCWGC 8 cut(s) 186, 396, 573, 981, 1214, 1401, 1901, 2816
ApoI RAATTY 3 cut(s) 1583, 2036, 2513
AseI ATTAAT 1 cut(s) 779
AsiGI ACCGGT 1 cut(s) 2799
Asp700I GAANNNNTTC 2 cut(s) 1055, 1532
AspLEI GCGC 1 cut(s) 2416
AsuHPI GGTGA 4 cut(s) 241, 280, 1873, 2780
AvaI CYCGRG 1 cut(s) 457
AvaII GGWCC 8 cut(s) 423, 449, 806, 1679, 2177, 2311, 2610, 2797
BaeGI GKGCMC 1 cut(s) 2557
BaeI ACNNNNGTAYC 2 cut(s) 1305, 1338
BalI TGGCCA 1 cut(s) 2351
BamHI GGATCC 2 cut(s) 2596, 2752
BanI GGYRCC 2 cut(s) 2413, 2674
BanII GRGCYC 3 cut(s) 1022, 1112, 2557
BauI CACGAG 1 cut(s) 376
BbrPI CACGTG 1 cut(s) 1076
BbsI GAAGAC 3 cut(s) 1492, 1835, 2829
Bbv12I GWGCWC 2 cut(s) 1022, 1112
BbvI GCAGC 8 cut(s) 198, 408, 585, 968, 1226, 1388, 1888, 2828
BccI CCATC 4 cut(s) 266, 679, 1330, 1973
BcgI CGANNNNNNTGC 2 cut(s) 2012, 2046
BciT130I CCWGG 3 cut(s) 202, 226, 1206
BciVI GTATCC 1 cut(s) 2399
BclI TGATCA 2 cut(s) 27, 711
BcoDI GTCTC 1 cut(s) 2768
BfaI CTAG 6 cut(s) 648, 656, 675, 1239, 1476, 1520
BfmI CTRYAG 3 cut(s) 1701, 2400, 2700
BfoI RGCGCY 1 cut(s) 2417
BfuAI ACCTGC 2 cut(s) 260, 411
BfuI GTATCC 1 cut(s) 2399
BglI GCCNNNNNGGC 1 cut(s) 2206
BglII AGATCT 5 cut(s) 853, 898, 1466, 2331, 2908
BisI GCNGC 8 cut(s) 187, 397, 574, 982, 1215, 1402, 1902, 2817
BlsI GCNGC 8 cut(s) 188, 398, 575, 983, 1216, 1403, 1903, 2818
BmcAI AGTACT 1 cut(s) 1133
Bme1390I CCNGG 3 cut(s) 202, 226, 1206
Bme18I GGWCC 8 cut(s) 423, 449, 806, 1679, 2177, 2311, 2610, 2797
BmeT110I CYCGRG 1 cut(s) 457
BmgBI CACGTC 1 cut(s) 286
BmrFI CCNGG 3 cut(s) 202, 226, 1206
BmsI GCATC 7 cut(s) 24, 183, 303, 1351, 1540, 2083, 2857
BoxI GACNNNNGTC 1 cut(s) 2343
BpiI GAAGAC 3 cut(s) 1492, 1835, 2829
Bpu10I CCTNAGC 2 cut(s) 534, 785
BpuEI CTTGAG 3 cut(s) 709, 772, 2812
Bsa29I ATCGAT 1 cut(s) 2876
BsaAI YACGTR 4 cut(s) 1076, 1300, 1309, 1389
BsaBI GATNNNNATC 1 cut(s) 1451
BsaHI GRCGYC 1 cut(s) 2414
BsaJI CCNNGG 4 cut(s) 201, 1204, 1555, 2600
BsaWI WCCGGW 1 cut(s) 2799
BsaXI ACNNNNNCTCC 6 cut(s) 514, 544, 1752, 1782, 1801, 1831
Bsc4I CCNNNNNNNGG 5 cut(s) 539, 1244, 1667, 2186, 2606
Bse118I RCCGGY 1 cut(s) 2799
Bse1I ACTGG 8 cut(s) 592, 949, 1264, 1863, 1876, 1980, 2201, 2313
Bse3DI GCAATG 2 cut(s) 837, 1136
Bse8I GATNNNNATC 1 cut(s) 1451
BseBI CCWGG 3 cut(s) 202, 226, 1206
BseCI ATCGAT 1 cut(s) 2876
BseDI CCNNGG 4 cut(s) 201, 1204, 1555, 2600
BseGI GGATG 6 cut(s) 905, 1341, 1555, 1984, 2074, 2105
BseJI GATNNNNATC 1 cut(s) 1451
BseLI CCNNNNNNNGG 5 cut(s) 539, 1244, 1667, 2186, 2606
BseMI GCAATG 2 cut(s) 837, 1136
BseNI ACTGG 8 cut(s) 592, 949, 1264, 1863, 1876, 1980, 2201, 2313
BseRI GAGGAG 4 cut(s) 1365, 1683, 1713, 2740
BseSI GKGCMC 1 cut(s) 2557
BseXI GCAGC 8 cut(s) 198, 408, 585, 968, 1226, 1388, 1888, 2828
BseYI CCCAGC 2 cut(s) 1242, 2605
BsgI GTGCAG 2 cut(s) 1056, 1233
Bsh1236I CGCG 1 cut(s) 406
BshFI GGCC 9 cut(s) 206, 229, 663, 1237, 2200, 2351, 2541, 2555, 2689
BshNI GGYRCC 2 cut(s) 2413, 2674
BshTI ACCGGT 1 cut(s) 2799
BshVI ATCGAT 1 cut(s) 2876
BsiHKAI GWGCWC 2 cut(s) 1022, 1112
BsiHKCI CYCGRG 1 cut(s) 457
BsiSI CCGG 3 cut(s) 2394, 2672, 2800
BslFI GGGAC 3 cut(s) 409, 1665, 2810
BslI CCNNNNNNNGG 5 cut(s) 539, 1244, 1667, 2186, 2606
BsmAI GTCTC 1 cut(s) 2768
BsmBI CGTCTC 1 cut(s) 2768
BsmFI GGGAC 3 cut(s) 409, 1665, 2810
BsmI GAATGC 3 cut(s) 600, 882, 1797
BsnI GGCC 9 cut(s) 206, 229, 663, 1237, 2200, 2351, 2541, 2555, 2689
BsoBI CYCGRG 1 cut(s) 457
Bsp120I GGGCCC 1 cut(s) 2553
Bsp1286I GDGCHC 3 cut(s) 1022, 1112, 2557
Bsp1407I TGTACA 3 cut(s) 1037, 1353, 1959
BspACI CCGC 4 cut(s) 404, 559, 1094, 1193
BspANI GGCC 9 cut(s) 206, 229, 663, 1237, 2200, 2351, 2541, 2555, 2689
BspDI ATCGAT 1 cut(s) 2876
BspFNI CGCG 1 cut(s) 406
BspHI TCATGA 3 cut(s) 30, 39, 1726
BspMAI CTGCAG 1 cut(s) 2704
BspMI ACCTGC 2 cut(s) 260, 411
BspQI GCTCTTC 1 cut(s) 1100
BspT107I GGYRCC 2 cut(s) 2413, 2674
BsrDI GCAATG 2 cut(s) 837, 1136
BsrFI RCCGGY 1 cut(s) 2799
BsrGI TGTACA 3 cut(s) 1037, 1353, 1959
BsrI ACTGG 8 cut(s) 592, 949, 1264, 1863, 1876, 1980, 2201, 2313
BssAI RCCGGY 1 cut(s) 2799
BssECI CCNNGG 4 cut(s) 201, 1204, 1555, 2600
BssNAI GTATAC 1 cut(s) 2461
BssNI GRCGYC 1 cut(s) 2414
BssSI CACGAG 1 cut(s) 376
BssT1I CCWWGG 2 cut(s) 1555, 2600
Bst1107I GTATAC 1 cut(s) 2461
Bst2BI CACGAG 1 cut(s) 376
Bst2UI CCWGG 3 cut(s) 202, 226, 1206
Bst6I CTCTTC 3 cut(s) 1100, 2358, 2622
BstACI GRCGYC 1 cut(s) 2414
BstAPI GCANNNNNTGC 1 cut(s) 95
BstAUI TGTACA 3 cut(s) 1037, 1353, 1959
BstBAI YACGTR 4 cut(s) 1076, 1300, 1309, 1389
BstC8I GCNNGC 3 cut(s) 280, 770, 1366
BstF5I GGATG 6 cut(s) 905, 1341, 1555, 1984, 2074, 2105
BstFNI CGCG 1 cut(s) 406
BstH2I RGCGCY 1 cut(s) 2417
BstHHI GCGC 1 cut(s) 2416
BstMAI GTCTC 1 cut(s) 2768
BstMWI GCNNNNNNNGC 6 cut(s) 63, 95, 978, 1107, 1407, 2206
BstNI CCWGG 3 cut(s) 202, 226, 1206
BstNSI RCATGY 3 cut(s) 282, 514, 2168
BstPAI GACNNNNGTC 1 cut(s) 2343
BstSCI CCNGG 3 cut(s) 200, 224, 1204
BstSFI CTRYAG 3 cut(s) 1701, 2400, 2700
BstSLI GKGCMC 1 cut(s) 2557
BstSNI TACGTA 1 cut(s) 1309
BstUI CGCG 1 cut(s) 406
BstV1I GCAGC 8 cut(s) 198, 408, 585, 968, 1226, 1388, 1888, 2828
BstV2I GAAGAC 3 cut(s) 1492, 1835, 2829
BstXI CCANNNNNNTGG 1 cut(s) 650
BstZ17I GTATAC 1 cut(s) 2461
Bsu15I ATCGAT 1 cut(s) 2876
BsuI GTATCC 1 cut(s) 2399
BsuRI GGCC 9 cut(s) 206, 229, 663, 1237, 2200, 2351, 2541, 2555, 2689
BsuTUI ATCGAT 1 cut(s) 2876
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 6 cut(s) 905, 1341, 1555, 1984, 2074, 2105
BtsI GCAGTG 1 cut(s) 1417
BtsIMutI CAGTG 5 cut(s) 585, 721, 1257, 1417, 2264
BveI ACCTGC 2 cut(s) 260, 411
Cac8I GCNNGC 3 cut(s) 280, 770, 1366
CaiI CAGNNNCTG 2 cut(s) 524, 792
CciI TCATGA 3 cut(s) 30, 39, 1726
CfoI GCGC 1 cut(s) 2416
Cfr10I RCCGGY 1 cut(s) 2799
ClaI ATCGAT 1 cut(s) 2876
CseI GACGC 1 cut(s) 1407
Csp6I GTAC 7 cut(s) 1038, 1132, 1306, 1310, 1354, 1960, 1983
CspAI ACCGGT 1 cut(s) 2799
CspCI CAANNNNNGTGG 2 cut(s) 1135, 1170
CviQI GTAC 7 cut(s) 1038, 1132, 1306, 1310, 1354, 1960, 1983
DinI GGCGCC 1 cut(s) 2415
EaeI YGGCCR 1 cut(s) 2349
Eam1104I CTCTTC 3 cut(s) 1100, 2358, 2622
EarI CTCTTC 3 cut(s) 1100, 2358, 2622
Ecl136II GAGCTC 2 cut(s) 1020, 1110
Eco105I TACGTA 1 cut(s) 1309
Eco130I CCWWGG 2 cut(s) 1555, 2600
Eco147I AGGCCT 3 cut(s) 229, 2541, 2689
Eco24I GRGCYC 3 cut(s) 1022, 1112, 2557
Eco47I GGWCC 8 cut(s) 423, 449, 806, 1679, 2177, 2311, 2610, 2797
Eco53kI GAGCTC 2 cut(s) 1020, 1110
Eco57I CTGAAG 5 cut(s) 96, 611, 1124, 2288, 2889
Eco72I CACGTG 1 cut(s) 1076
Eco88I CYCGRG 1 cut(s) 457
EcoICRI GAGCTC 2 cut(s) 1020, 1110
EcoO109I RGGNCCY 3 cut(s) 423, 662, 2554
EcoRI GAATTC 1 cut(s) 1583
EcoRII CCWGG 3 cut(s) 200, 224, 1204
EcoT14I CCWWGG 2 cut(s) 1555, 2600
EcoT22I ATGCAT 2 cut(s) 68, 2222
EcoT38I GRGCYC 3 cut(s) 1022, 1112, 2557
EgeI GGCGCC 1 cut(s) 2415
EheI GGCGCC 1 cut(s) 2415
ErhI CCWWGG 2 cut(s) 1555, 2600
Esp3I CGTCTC 1 cut(s) 2768
FalI AAGNNNNNCTT 2 cut(s) 1421, 1453
FaqI GGGAC 3 cut(s) 409, 1665, 2810
FauNDI CATATG 1 cut(s) 62
FbaI TGATCA 2 cut(s) 27, 711
FblI GTMKAC 1 cut(s) 2460
Fnu4HI GCNGC 8 cut(s) 187, 397, 574, 982, 1215, 1402, 1902, 2817
FokI GGATG 6 cut(s) 892, 1348, 1562, 1991, 2061, 2112
FriOI GRGCYC 3 cut(s) 1022, 1112, 2557
Fsp4HI GCNGC 8 cut(s) 187, 397, 574, 982, 1215, 1402, 1902, 2817
FspBI CTAG 6 cut(s) 648, 656, 675, 1239, 1476, 1520
GlaI GCGC 1 cut(s) 2415
GluI GCNGC 8 cut(s) 187, 397, 574, 982, 1215, 1402, 1902, 2817
GsaI CCCAGC 2 cut(s) 1246, 2609
HaeII RGCGCY 1 cut(s) 2417
HaeIII GGCC 9 cut(s) 206, 229, 663, 1237, 2200, 2351, 2541, 2555, 2689
HapII CCGG 3 cut(s) 2394, 2672, 2800
HgaI GACGC 1 cut(s) 1407
HhaI GCGC 1 cut(s) 2416
Hin1I GRCGYC 1 cut(s) 2414
Hin6I GCGC 1 cut(s) 2414
HinP1I GCGC 1 cut(s) 2414
HincII GTYRAC 2 cut(s) 553, 2784
HindII GTYRAC 2 cut(s) 553, 2784
HindIII AAGCTT 4 cut(s) 859, 1063, 1430, 2354
HinfI GANTC 6 cut(s) 562, 619, 1248, 1706, 2258, 2578
HpaI GTTAAC 1 cut(s) 553
HpaII CCGG 3 cut(s) 2394, 2672, 2800
HphI GGTGA 4 cut(s) 241, 280, 1873, 2780
HpyCH4IV ACGT 6 cut(s) 285, 1053, 1075, 1299, 1308, 1388
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 95, 978, 1107, 1407, 2206
HpySE526I ACGT 6 cut(s) 285, 1053, 1075, 1299, 1308, 1388
Hsp92I GRCGYC 1 cut(s) 2414
HspAI GCGC 1 cut(s) 2414
KasI GGCGCC 1 cut(s) 2413
Ksp22I TGATCA 2 cut(s) 27, 711
KspAI GTTAAC 1 cut(s) 553
LguI GCTCTTC 1 cut(s) 1100
LmnI GCTCC 6 cut(s) 266, 789, 879, 1760, 2587, 2727
Lsp1109I GCAGC 8 cut(s) 198, 408, 585, 968, 1226, 1388, 1888, 2828
LweI GCATC 7 cut(s) 24, 183, 303, 1351, 1540, 2083, 2857
MaeI CTAG 6 cut(s) 648, 656, 675, 1239, 1476, 1520
MaeII ACGT 6 cut(s) 285, 1053, 1075, 1299, 1308, 1388
MaeIII GTNAC 5 cut(s) 247, 286, 348, 834, 2121
MfeI CAATTG 1 cut(s) 1147
MhlI GDGCHC 3 cut(s) 1022, 1112, 2557
MlsI TGGCCA 1 cut(s) 2351
MluNI TGGCCA 1 cut(s) 2351
Mly113I GGCGCC 1 cut(s) 2414
MmeI TCCRAC 2 cut(s) 596, 2476
Mox20I TGGCCA 1 cut(s) 2351
Mph1103I ATGCAT 2 cut(s) 68, 2222
MroXI GAANNNNTTC 2 cut(s) 1055, 1532
MscI TGGCCA 1 cut(s) 2351
MslI CAYNNNNRTG 1 cut(s) 2079
Msp20I TGGCCA 1 cut(s) 2351
MspI CCGG 3 cut(s) 2394, 2672, 2800
MspR9I CCNGG 3 cut(s) 202, 226, 1206
MunI CAATTG 1 cut(s) 1147
Mva1269I GAATGC 3 cut(s) 600, 882, 1797
MvaI CCWGG 3 cut(s) 202, 226, 1206
MvnI CGCG 1 cut(s) 406
MwoI GCNNNNNNNGC 6 cut(s) 63, 95, 978, 1107, 1407, 2206
NarI GGCGCC 1 cut(s) 2414
NdeI CATATG 1 cut(s) 62
NmuCI GTSAC 3 cut(s) 247, 286, 834
NsiI ATGCAT 2 cut(s) 68, 2222
NspI RCATGY 3 cut(s) 282, 514, 2168
PaeI GCATGC 1 cut(s) 282
PagI TCATGA 3 cut(s) 30, 39, 1726
PaqCI CACCTGC 1 cut(s) 260
PceI AGGCCT 3 cut(s) 229, 2541, 2689
PciI ACATGT 1 cut(s) 510
PciSI GCTCTTC 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 1 cut(s) 1305
PctI GAATGC 3 cut(s) 600, 882, 1797
PdmI GAANNNNTTC 2 cut(s) 1055, 1532
PfeI GAWTC 6 cut(s) 562, 619, 1248, 1706, 2258, 2578
PinAI ACCGGT 1 cut(s) 2799
PkrI GCNGC 8 cut(s) 188, 398, 575, 983, 1216, 1403, 1903, 2818
PluTI GGCGCC 1 cut(s) 2417
PmaCI CACGTG 1 cut(s) 1076
PmlI CACGTG 1 cut(s) 1076
Ppu21I YACGTR 4 cut(s) 1076, 1300, 1309, 1389
PpuMI RGGWCCY 1 cut(s) 423
PscI ACATGT 1 cut(s) 510
PshAI GACNNNNGTC 1 cut(s) 2343
PshBI ATTAAT 1 cut(s) 779
Psp124BI GAGCTC 2 cut(s) 1022, 1112
Psp5II RGGWCCY 1 cut(s) 423
Psp6I CCWGG 3 cut(s) 200, 224, 1204
PspCI CACGTG 1 cut(s) 1076
PspFI CCCAGC 2 cut(s) 1242, 2605
PspGI CCWGG 3 cut(s) 200, 224, 1204
PspOMI GGGCCC 1 cut(s) 2553
PspPPI RGGWCCY 1 cut(s) 423
PstI CTGCAG 1 cut(s) 2704
PstNI CAGNNNCTG 2 cut(s) 524, 792
RsaI GTAC 7 cut(s) 1039, 1133, 1307, 1311, 1355, 1961, 1984
RsaNI GTAC 7 cut(s) 1038, 1132, 1306, 1310, 1354, 1960, 1983
RseI CAYNNNNRTG 1 cut(s) 2079
SacI GAGCTC 2 cut(s) 1022, 1112
SapI GCTCTTC 1 cut(s) 1100
SatI GCNGC 8 cut(s) 187, 397, 574, 982, 1215, 1402, 1902, 2817
ScaI AGTACT 1 cut(s) 1133
ScrFI CCNGG 3 cut(s) 202, 226, 1206
SduI GDGCHC 3 cut(s) 1022, 1112, 2557
SfaNI GCATC 7 cut(s) 24, 183, 303, 1351, 1540, 2083, 2857
SfcI CTRYAG 3 cut(s) 1701, 2400, 2700
SfoI GGCGCC 1 cut(s) 2415
SinI GGWCC 8 cut(s) 423, 449, 806, 1679, 2177, 2311, 2610, 2797
SmiMI CAYNNNNRTG 1 cut(s) 2079
SmlI CTYRAG 3 cut(s) 688, 751, 2791
SmoI CTYRAG 3 cut(s) 688, 751, 2791
SnaBI TACGTA 1 cut(s) 1309
SphI GCATGC 1 cut(s) 282
SseBI AGGCCT 3 cut(s) 229, 2541, 2689
SsiI CCGC 4 cut(s) 404, 559, 1094, 1193
SspDI GGCGCC 1 cut(s) 2413
SspI AATATT 1 cut(s) 849
SspMI CTAG 6 cut(s) 648, 656, 675, 1239, 1476, 1520
SstI GAGCTC 2 cut(s) 1022, 1112
StuI AGGCCT 3 cut(s) 229, 2541, 2689
StyD4I CCNGG 3 cut(s) 200, 224, 1204
StyI CCWWGG 2 cut(s) 1555, 2600
TaiI ACGT 6 cut(s) 288, 1056, 1078, 1302, 1311, 1391
TaqI TCGA 6 cut(s) 177, 369, 1497, 1536, 2518, 2876
TaqII GACCGA 1 cut(s) 64
TatI WGTACW 4 cut(s) 1037, 1131, 1353, 1959
TfiI GAWTC 6 cut(s) 562, 619, 1248, 1706, 2258, 2578
TscAI CASTG 5 cut(s) 592, 721, 1264, 1417, 2271
TseFI GTSAC 3 cut(s) 247, 286, 834
TseI GCWGC 8 cut(s) 186, 396, 573, 981, 1214, 1401, 1901, 2816
Tsp45I GTSAC 3 cut(s) 247, 286, 834
TspDTI ATGAA 5 cut(s) 17, 49, 1619, 2151, 2525
TspGWI ACGGA 2 cut(s) 741, 1504
TspRI CASTG 5 cut(s) 592, 721, 1264, 1417, 2271
VpaK11BI GGWCC 8 cut(s) 423, 449, 806, 1679, 2177, 2311, 2610, 2797
VspI ATTAAT 1 cut(s) 779
XapI RAATTY 3 cut(s) 1583, 2036, 2513
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 3 cut(s) 282, 514, 2168
XmiI GTMKAC 1 cut(s) 2460
XmnI GAANNNNTTC 2 cut(s) 1055, 1532
XspI CTAG 6 cut(s) 648, 656, 675, 1239, 1476, 1520
ZrmI AGTACT 1 cut(s) 1133
Zsp2I ATGCAT 2 cut(s) 68, 2222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.