Rw5G008220

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8831364 .. 8838432
7069 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008220.1

Sequence Viewer

Length: 3108 bp
ATGAAGATGGCAATCGGAGCTGGGCTACTTCTTCCTAATAGTCGTCGGAAAACCATCATGAACCTTATCGTGGTGGTGATACTGGTTCTCTGCTGCAACACTGGATTAGTCAAAGTTGAGGCGCTTACAACTCGTCTTCCTGCTTCTGAAGTTGAAGCCCTAGAAGAAATTGCTACACAAATAGGAAAAAAAGACTGGGATTTCACAGTAGACCCGTGCCTGAATGACACAACCCACACAAGCTGGGCTACCCCAAAGCCTGCTGACAGGCCTCTATTCAACAACACCCTCACTTGCAACTGCTCCTTCCCTGATGGCTCGTGTCATGTCATTAACATTATTCTTAGAGGGCAAGATCTTGCTGGTGTTCTTCCACCATCTATTGCAAAGTTACCCTACCTTACACTAATCGATTTCACGAGGAACTTTCTTAGTGGTAATATACCGAGTGAATGGGCTTCTACAAAGCTGGAATATATGTCCTTTAATGTGAACAACTTAACTGGACCAATCCCTGCCTTCTTGGGAAACATCACCACTCTAAAATACTTGAACCTTGAGACTAACATGTTTTCTGGAACTGTTCCTCCTGAGCTTGGGAAGTTGGTTAACTTGCAGAATCTCATTATTAGTACAAACAATCTCACAGGAGTGTTGCCAGTGAATCTCACTAGACTGAGCAAATTAGCAGAACTGAGAATTAGCAGTAACAACTTCACTGGAAGAATTCCGGATTATTTCCAGAGTTGGAATCAACTTACGCAATTGGAGATCCAAGCTAGTGGTTTACAAGGCCCCATTCCATCTAGCATCTCTATCTTGCGTAATTTAACAGAACTAAGGATCAGTGACTTAAATGGAGGGGGTTCAGTGTTTCCCAACTTAAGTAATATGACAAGCTTGCAAAGATTAATGCTGAGGAGCTGTGATTTATCTGGACCTATTCATGATTTATCAGCAATGACGGTGTTAAATATCTTAGATCTTAGCTTCAACAAATTGGAAGGAATTATTCCTGATCTTGAAGGTCTTACTGAGAAAAGATTGCAGTACTTGTATTTGACAAGCAACTTGCTCAATGGCTCTATTCCAGAATGGATTAAGAACAGAGATAACCGCTACCAAATAGATGTTTCTTACAATAATTTTTCGAAGATCTCTGAGCCATCTACATGTAGCGAATACCTGAATGTCTTCAAAAGCTCTGCTGTACCAAACAACACATTATCCGGAGCGTGCCTGGACAAATTTCCATGTACAGAAGTTCAGTACTCATTGCATATAAACTGTGGTGGGAGAGCAACCACCATTGGAGGCATCAAATTCGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTGTTCCGACGAGACCTAACTGGGGAGTCAGTAGCTCTGGAATTTTCTGGGATACTGACCTCACCTCTAAAGACTACATAGCAAATAATGTATCAACACTTGGAATGGAAAACTCTCAGTTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACATATTATGCAAACTGCTTAGGAGATGGAAAGTATACTGTGAAACTTCACTTTGCGGAGATAATAATCCGAGCCAATAGATCTTTTTACAGTGTTGGAAGACGGATATTTGATGTCTATATTCAGGAGAAACTTGTGTGGAAGGATTTTGACATCGTAAAGGAAGCACAAGGGGTTGATAAGGTATACATTATGGAAACAAATGCAGTTCAAGTTACAAACAAAACTTTAGAGATTCGGTTTCATTGGTCTGGAAAAGGCACGACAGCATCCCCTAGACGAGGAGTCTATGGACCCCTTATATCAGCCATTTCTATAGAGTCTGAGTTCAAGCCTCCTAAAACTCATGACAGCAAAAGAAGGATGTATATTGTGGTTGGAGTTTCAGTTGGAGCTTCAGTTTTGTGCCTCTTCTTCATCATTTTTGGCATTCTTTGGTGGAAAGGCTGTCTGGTGGATAGCCAGACATCACGGGAAGAAGCTCTGAGAGGACTAGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCAACTAATAACTTTGATCCTTTAAATAAAATTGGGGAAGGTGGTTTTGGTTGTGTCTACAAGGGCATATTATTGGATGGCACTACAATTGCAGTTAAGCAACTCTCTTCAAAATCAAAGCAAGGAAATCGTGAGTTCGTGAATGAAATAGGCATGATATCTGGTTTACAACATCCAAATGTGGTTAGGTTATACGGTTGCTGTATTGAAGGAAATCAATTACTATTGGTATACGAATACATGGAAAATAACAGCCTTGCGCATTCTTTGTTTGGGGAAGAGGAAGGCGTCCTAACACTGGACTGGCCTACAAGGCAAAAAGTATGCCTAGGCATAGCAAGAGGTTTGGCTTTTCTACACGAGGAATCAACACTGAAGGTTGTACATAGAGACATCAAAGCTACGAATGTATTACTGGACCAAGACCTGAATGCTAAGATTTCGGACTTTGGTTTAGCCAAGCTTGACGAAGAGGAGAACACACATATTAGCACAAGAATTGCTGGAACTATAGGTTATATGGCACCGGAATATGCACTCTGGGGTTGTTTGACCTACAAAGCTGACGTCTACAGTTTTGGTGTTGTTGCACTGGAAATTGTTGCCGGAAAGAACAACATGAAGTTTCGACCAAATGATGATTTTGTATGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATTTGAAGGAGCTGGTGGATCAGCGGCTCGGATCAGATTTCAAGGAGGAACAAGCAATTAGAATGGCTAAAGTAGCTTTGTTATGCACCAATTCAGCACCATCGCTTAGGCCTACCATGTCCGTAGTAGTGAGCATGCTAGAAGGGCGGACCTCCGTCCCTGAGTTGATCATGGATCCTAGCATTTATGGTGATAAAATGAGGATGTCAGCCTTGAGACAACAGTTTGATCAAATTGTAAATGACAGCTCAATTCGATCTCAAACGAGCTACACTGATTCTCAGAGCCACCTTCGTTCATCAGATGTACCATGGACTGGTTCTTCGGGTACTACTACGTCTTCAGATCTCTACAAACTTAATCCTTAG

Protein Analysis

1035

Amino Acids

114.71

Weight (kDa)

6.3

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 174 - 282 1.6e-10 Leucine-rich repeat region
Malectin PF11721 425 - 609 3.5e-37 Malectin domain
Pkinase PF00069 692 - 954 1.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 693 - 959 1.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2622
Acc16I TGCGCA 1 cut(s) 2313
AccB1I GGYRCC 1 cut(s) 2575
AccB7I CCANNNNNTGG 1 cut(s) 3056
AccI GTMKAC 6 cut(s) 210, 1550, 1701, 2109, 2283, 2622
AccIII TCCGGA 2 cut(s) 730, 1229
AciI CCGC 4 cut(s) 1117, 1571, 2764, 2887
AclWI GGATC 7 cut(s) 766, 851, 2063, 2766, 2779, 2909, 2922
AcsI RAATTY 6 cut(s) 726, 1247, 1322, 1358, 1401, 2740
AcuI CTGAAG 4 cut(s) 168, 1896, 2447, 3066
AcyI GRCGYC 2 cut(s) 2340, 2619
AfaI GTAC 9 cut(s) 634, 1052, 1212, 1258, 1271, 1484, 2436, 3048, 3070
AfiI CCNNNNNNNGG 6 cut(s) 70, 596, 1382, 1796, 2350, 3056
AflII CTTAAG 1 cut(s) 883
AflIII ACRYGT 2 cut(s) 567, 1172
AhdI GACNNNNNGTC 1 cut(s) 1799
AjnI CCWGG 1 cut(s) 1239
AjuI GAANNNNNNNTTGG 2 cut(s) 2082, 2114
AleI CACNNNNGTG 1 cut(s) 650
AloI GAACNNNNNNTCC 2 cut(s) 571, 603
Alw26I GTCTC 4 cut(s) 554, 1366, 2436, 2950
AlwI GGATC 7 cut(s) 766, 851, 2063, 2766, 2779, 2909, 2922
Aor13HI TCCGGA 2 cut(s) 730, 1229
AoxI GGCC 5 cut(s) 269, 793, 2357, 2715, 2849
ApaI GGGCCC 1 cut(s) 2719
ApeKI GCWGC 2 cut(s) 93, 2051
ApoI RAATTY 6 cut(s) 726, 1247, 1322, 1358, 1401, 2740
ArsI GACNNNNNNTTYG 4 cut(s) 2604, 2636, 3046, 3078
AseI ATTAAT 1 cut(s) 911
Asp700I GAANNNNTTC 1 cut(s) 1193
AspA2I CCTAGG 1 cut(s) 2380
AspLEI GCGC 2 cut(s) 124, 2314
AspS9I GGNCC 8 cut(s) 506, 794, 938, 1808, 2470, 2715, 2716, 2889
AsuHPI GGTGA 5 cut(s) 88, 526, 1414, 2023, 2942
AsuII TTCGAA 2 cut(s) 1151, 1326
AvaII GGWCC 5 cut(s) 506, 938, 1808, 2470, 2889
AvrII CCTAGG 1 cut(s) 2380
BaeGI GKGCMC 1 cut(s) 2719
BamHI GGATCC 1 cut(s) 2914
BanI GGYRCC 1 cut(s) 2575
BanII GRGCYC 1 cut(s) 2719
BauI CACGAG 3 cut(s) 319, 418, 2411
BbsI GAAGAC 4 cut(s) 128, 1186, 1621, 3072
BbvCI CCTCAGC 1 cut(s) 917
BbvI GCAGC 2 cut(s) 80, 2038
BccI CCATC 8 cut(s) 62, 308, 385, 811, 1174, 1535, 2123, 2848
BcgI CGANNNNNNTGC 4 cut(s) 1306, 1340, 2162, 2196
BciT130I CCWGG 1 cut(s) 1241
BciVI GTATCC 1 cut(s) 1405
BclI TGATCA 2 cut(s) 2907, 2968
BcoDI GTCTC 4 cut(s) 554, 1366, 2436, 2950
BfaI CTAG 9 cut(s) 161, 672, 780, 807, 1791, 2009, 2381, 2879, 2919
BfmI CTRYAG 4 cut(s) 1830, 2015, 2562, 2623
BfoI RGCGCY 1 cut(s) 125
BfrI CTTAAG 1 cut(s) 883
BfuI GTATCC 1 cut(s) 1405
BglI GCCNNNNNGGC 1 cut(s) 2365
BglII AGATCT 7 cut(s) 355, 982, 1155, 1339, 1595, 2011, 3085
BisI GCNGC 3 cut(s) 94, 2052, 2765
BlnI CCTAGG 1 cut(s) 2380
BlsI GCNGC 3 cut(s) 95, 2053, 2766
BmcAI AGTACT 2 cut(s) 1052, 1271
Bme1390I CCNGG 1 cut(s) 1241
Bme18I GGWCC 5 cut(s) 506, 938, 1808, 2470, 2889
BmeRI GACNNNNNGTC 1 cut(s) 1799
BmgT120I GGNCC 8 cut(s) 506, 794, 938, 1808, 2470, 2715, 2716, 2889
BmiI GGNNCC 5 cut(s) 796, 1810, 2577, 2717, 2916
BmrFI CCNGG 1 cut(s) 1241
BmrI ACTGGG 2 cut(s) 205, 1390
BmsI GCATC 3 cut(s) 819, 1326, 1793
BmuI ACTGGG 2 cut(s) 205, 1390
BoxI GACNNNNGTC 1 cut(s) 2894
BpiI GAAGAC 4 cut(s) 128, 1186, 1621, 3072
Bpu10I CCTNAGC 4 cut(s) 591, 917, 1534, 2846
Bpu14I TTCGAA 2 cut(s) 1151, 1326
BpuEI CTTGAG 3 cut(s) 578, 2056, 2974
Bsa29I ATCGAT 1 cut(s) 411
BsaBI GATNNNNATC 3 cut(s) 11, 1338, 1580
BsaHI GRCGYC 2 cut(s) 2340, 2619
BsaI GGTCTC 1 cut(s) 1366
BsaJI CCNNGG 2 cut(s) 2380, 3050
BsaWI WCCGGW 3 cut(s) 730, 1229, 2578
BsaXI ACNNNNNCTCC 6 cut(s) 571, 601, 1887, 1899, 1917, 1929
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 596, 1382, 1796, 2350, 3056
Bse3DI GCAATG 2 cut(s) 966, 1274
Bse8I GATNNNNATC 3 cut(s) 11, 1338, 1580
BseAI TCCGGA 2 cut(s) 730, 1229
BseBI CCWGG 1 cut(s) 1241
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 2 cut(s) 2380, 3050
BseGI GGATG 5 cut(s) 1784, 1884, 2134, 2224, 2949
BseJI GATNNNNATC 3 cut(s) 11, 1338, 1580
BseLI CCNNNNNNNGG 6 cut(s) 70, 596, 1382, 1796, 2350, 3056
BseMI GCAATG 2 cut(s) 966, 1274
BseRI GAGGAG 4 cut(s) 934, 1494, 1812, 2540
BseSI GKGCMC 1 cut(s) 2719
BseXI GCAGC 2 cut(s) 80, 2038
BseYI CCCAGC 2 cut(s) 20, 243
BshFI GGCC 5 cut(s) 271, 795, 2359, 2717, 2851
BshNI GGYRCC 1 cut(s) 2575
BshVI ATCGAT 1 cut(s) 411
BsiSI CCGG 4 cut(s) 731, 1230, 2579, 2658
BslFI GGGAC 1 cut(s) 2882
BslI CCNNNNNNNGG 6 cut(s) 70, 596, 1382, 1796, 2350, 3056
BsmAI GTCTC 4 cut(s) 554, 1366, 2436, 2950
BsmFI GGGAC 1 cut(s) 2882
BsmI GAATGC 4 cut(s) 1495, 1944, 2314, 2488
BsnI GGCC 5 cut(s) 271, 795, 2359, 2717, 2851
Bso31I GGTCTC 1 cut(s) 1366
Bsp119I TTCGAA 2 cut(s) 1151, 1326
Bsp120I GGGCCC 1 cut(s) 2715
Bsp1286I GDGCHC 1 cut(s) 2719
Bsp13I TCCGGA 2 cut(s) 730, 1229
Bsp1407I TGTACA 3 cut(s) 1256, 1482, 2434
Bsp19I CCATGG 1 cut(s) 3050
BspACI CCGC 4 cut(s) 1117, 1571, 2764, 2887
BspANI GGCC 5 cut(s) 271, 795, 2359, 2717, 2851
BspDI ATCGAT 1 cut(s) 411
BspEI TCCGGA 2 cut(s) 730, 1229
BspHI TCATGA 3 cut(s) 57, 946, 1861
BspLI GGNNCC 5 cut(s) 796, 1810, 2577, 2717, 2916
BspMAI CTGCAG 1 cut(s) 2019
BspPI GGATC 7 cut(s) 766, 851, 2063, 2766, 2779, 2909, 2922
BspT104I TTCGAA 2 cut(s) 1151, 1326
BspT107I GGYRCC 1 cut(s) 2575
BspTI CTTAAG 1 cut(s) 883
BspTNI GGTCTC 1 cut(s) 1366
BsrDI GCAATG 2 cut(s) 966, 1274
BsrGI TGTACA 3 cut(s) 1256, 1482, 2434
BssECI CCNNGG 2 cut(s) 2380, 3050
BssNAI GTATAC 3 cut(s) 1551, 1702, 2284
BssNI GRCGYC 2 cut(s) 2340, 2619
BssSI CACGAG 3 cut(s) 319, 418, 2411
BssT1I CCWWGG 2 cut(s) 2380, 3050
Bst1107I GTATAC 3 cut(s) 1551, 1702, 2284
Bst2BI CACGAG 3 cut(s) 319, 418, 2411
Bst2UI CCWGG 1 cut(s) 1241
Bst4CI ACNGT 9 cut(s) 208, 583, 967, 1289, 1555, 1607, 2249, 2627, 2964
Bst6I CTCTTC 4 cut(s) 1931, 2164, 2325, 2517
BstACI GRCGYC 2 cut(s) 2340, 2619
BstAFI CTTAAG 1 cut(s) 883
BstAUI TGTACA 3 cut(s) 1256, 1482, 2434
BstBI TTCGAA 2 cut(s) 1151, 1326
BstC8I GCNNGC 5 cut(s) 261, 902, 1237, 1495, 2876
BstDSI CCRYGG 1 cut(s) 3050
BstENI CCTNNNNNAGG 1 cut(s) 1794
BstF5I GGATG 5 cut(s) 1784, 1884, 2134, 2224, 2949
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 2 cut(s) 124, 2314
BstMAI GTCTC 4 cut(s) 554, 1366, 2436, 2950
BstMWI GCNNNNNNNGC 4 cut(s) 17, 2365, 2813, 2884
BstNI CCWGG 1 cut(s) 1241
BstNSI RCATGY 3 cut(s) 571, 1176, 2878
BstPAI GACNNNNGTC 1 cut(s) 2894
BstSCI CCNGG 1 cut(s) 1239
BstSFI CTRYAG 4 cut(s) 1830, 2015, 2562, 2623
BstSLI GKGCMC 1 cut(s) 2719
BstV1I GCAGC 2 cut(s) 80, 2038
BstV2I GAAGAC 4 cut(s) 128, 1186, 1621, 3072
BstX2I RGATCY 9 cut(s) 355, 771, 982, 1155, 1339, 1595, 2011, 2914, 3085
BstXI CCANNNNNNTGG 1 cut(s) 782
BstYI RGATCY 9 cut(s) 355, 771, 982, 1155, 1339, 1595, 2011, 2914, 3085
BstZ17I GTATAC 3 cut(s) 1551, 1702, 2284
Bsu15I ATCGAT 1 cut(s) 411
BsuI GTATCC 1 cut(s) 1405
BsuRI GGCC 5 cut(s) 271, 795, 2359, 2717, 2851
BsuTUI ATCGAT 1 cut(s) 411
BtgI CCRYGG 1 cut(s) 3050
BtgZI GCGATG 1 cut(s) 2826
BtsCI GGATG 5 cut(s) 1784, 1884, 2134, 2224, 2949
Cac8I GCNNGC 5 cut(s) 261, 902, 1237, 1495, 2876
CciI TCATGA 3 cut(s) 57, 946, 1861
CfoI GCGC 2 cut(s) 124, 2314
Cfr13I GGNCC 8 cut(s) 506, 794, 938, 1808, 2470, 2715, 2716, 2889
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 1 cut(s) 2329
Csp6I GTAC 9 cut(s) 633, 1051, 1211, 1257, 1270, 1483, 2435, 3047, 3069
CviQI GTAC 9 cut(s) 633, 1051, 1211, 1257, 1270, 1483, 2435, 3047, 3069
DraI TTTAAA 1 cut(s) 2076
DriI GACNNNNNGTC 1 cut(s) 1799
Eam1104I CTCTTC 4 cut(s) 1931, 2164, 2325, 2517
Eam1105I GACNNNNNGTC 1 cut(s) 1799
EarI CTCTTC 4 cut(s) 1931, 2164, 2325, 2517
EciI GGCGGA 1 cut(s) 2902
Eco130I CCWWGG 2 cut(s) 2380, 3050
Eco147I AGGCCT 2 cut(s) 271, 2851
Eco24I GRGCYC 1 cut(s) 2719
Eco31I GGTCTC 1 cut(s) 1366
Eco32I GATATC 1 cut(s) 2211
Eco47I GGWCC 5 cut(s) 506, 938, 1808, 2470, 2889
Eco57I CTGAAG 4 cut(s) 168, 1896, 2447, 3066
EcoNI CCTNNNNNAGG 1 cut(s) 1794
EcoO109I RGGNCCY 2 cut(s) 794, 2716
EcoRI GAATTC 1 cut(s) 726
EcoRII CCWGG 1 cut(s) 1239
EcoRV GATATC 1 cut(s) 2211
EcoT14I CCWWGG 2 cut(s) 2380, 3050
EcoT38I GRGCYC 1 cut(s) 2719
ErhI CCWWGG 2 cut(s) 2380, 3050
FaqI GGGAC 1 cut(s) 2882
FbaI TGATCA 2 cut(s) 2907, 2968
FblI GTMKAC 6 cut(s) 210, 1550, 1701, 2109, 2283, 2622
Fnu4HI GCNGC 3 cut(s) 94, 2052, 2765
FokI GGATG 5 cut(s) 1771, 1891, 2141, 2211, 2956
FriOI GRGCYC 1 cut(s) 2719
Fsp4HI GCNGC 3 cut(s) 94, 2052, 2765
FspBI CTAG 9 cut(s) 161, 672, 780, 807, 1791, 2009, 2381, 2879, 2919
FspI TGCGCA 1 cut(s) 2313
GlaI GCGC 2 cut(s) 123, 2313
GluI GCNGC 3 cut(s) 94, 2052, 2765
GsaI CCCAGC 2 cut(s) 24, 247
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 5 cut(s) 271, 795, 2359, 2717, 2851
HapII CCGG 4 cut(s) 731, 1230, 2579, 2658
HgaI GACGC 1 cut(s) 2329
HhaI GCGC 2 cut(s) 124, 2314
Hin1I GRCGYC 2 cut(s) 2340, 2619
Hin6I GCGC 2 cut(s) 122, 2312
HinP1I GCGC 2 cut(s) 122, 2312
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HindIII AAGCTT 2 cut(s) 898, 2513
HinfI GANTC 9 cut(s) 619, 664, 751, 1386, 1750, 1800, 1835, 2417, 3017
HpaI GTTAAC 1 cut(s) 610
HpaII CCGG 4 cut(s) 731, 1230, 2579, 2658
HphI GGTGA 5 cut(s) 88, 526, 1414, 2023, 2942
Hpy99I CGWCG 2 cut(s) 48, 1372
HpyCH4III ACNGT 9 cut(s) 208, 583, 967, 1289, 1555, 1607, 2249, 2627, 2964
HpyCH4IV ACGT 2 cut(s) 2619, 3077
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 2365, 2813, 2884
HpySE526I ACGT 2 cut(s) 2619, 3077
Hsp92I GRCGYC 2 cut(s) 2340, 2619
HspAI GCGC 2 cut(s) 122, 2312
Kpn2I TCCGGA 2 cut(s) 730, 1229
Ksp22I TGATCA 2 cut(s) 2907, 2968
KspAI GTTAAC 1 cut(s) 610
LmnI GCTCC 7 cut(s) 17, 308, 921, 1232, 1352, 1907, 2749
Lsp1109I GCAGC 2 cut(s) 80, 2038
LweI GCATC 3 cut(s) 819, 1326, 1793
MaeI CTAG 9 cut(s) 161, 672, 780, 807, 1791, 2009, 2381, 2879, 2919
MaeII ACGT 2 cut(s) 2619, 3077
MaeIII GTNAC 4 cut(s) 390, 707, 848, 1729
MfeI CAATTG 2 cut(s) 764, 2139
MflI RGATCY 9 cut(s) 355, 771, 982, 1155, 1339, 1595, 2011, 2914, 3085
MhlI GDGCHC 1 cut(s) 2719
MlyI GAGTC 3 cut(s) 1395, 1809, 1844
MmeI TCCRAC 6 cut(s) 26, 728, 1391, 1591, 1873, 1885
MroI TCCGGA 2 cut(s) 730, 1229
MroXI GAANNNNTTC 1 cut(s) 1193
MslI CAYNNNNRTG 3 cut(s) 650, 1171, 2229
MspA1I CMGCKG 1 cut(s) 2764
MspCI CTTAAG 1 cut(s) 883
MspI CCGG 4 cut(s) 731, 1230, 2579, 2658
MspR9I CCNGG 1 cut(s) 1241
MunI CAATTG 2 cut(s) 764, 2139
Mva1269I GAATGC 4 cut(s) 1495, 1944, 2314, 2488
MvaI CCWGG 1 cut(s) 1241
MwoI GCNNNNNNNGC 4 cut(s) 17, 2365, 2813, 2884
NcoI CCATGG 1 cut(s) 3050
NlaIV GGNNCC 5 cut(s) 796, 1810, 2577, 2717, 2916
NmuCI GTSAC 1 cut(s) 848
NsbI TGCGCA 1 cut(s) 2313
NspI RCATGY 3 cut(s) 571, 1176, 2878
NspV TTCGAA 2 cut(s) 1151, 1326
OliI CACNNNNGTG 1 cut(s) 650
PaeI GCATGC 1 cut(s) 2878
PagI TCATGA 3 cut(s) 57, 946, 1861
PceI AGGCCT 2 cut(s) 271, 2851
PciI ACATGT 2 cut(s) 567, 1172
PctI GAATGC 4 cut(s) 1495, 1944, 2314, 2488
PdmI GAANNNNTTC 1 cut(s) 1193
PfeI GAWTC 6 cut(s) 619, 664, 751, 1750, 2417, 3017
PflMI CCANNNNNTGG 1 cut(s) 3056
PkrI GCNGC 3 cut(s) 95, 2053, 2766
PleI GAGTC 3 cut(s) 1394, 1808, 1843
PpsI GAGTC 3 cut(s) 1394, 1808, 1843
PscI ACATGT 2 cut(s) 567, 1172
PshAI GACNNNNGTC 1 cut(s) 2894
PshBI ATTAAT 1 cut(s) 911
Psp6I CCWGG 1 cut(s) 1239
PspFI CCCAGC 2 cut(s) 20, 243
PspGI CCWGG 1 cut(s) 1239
PspN4I GGNNCC 5 cut(s) 796, 1810, 2577, 2717, 2916
PspOMI GGGCCC 1 cut(s) 2715
PspPI GGNCC 8 cut(s) 506, 794, 938, 1808, 2470, 2715, 2716, 2889
PstI CTGCAG 1 cut(s) 2019
PsuI RGATCY 9 cut(s) 355, 771, 982, 1155, 1339, 1595, 2011, 2914, 3085
RsaI GTAC 9 cut(s) 634, 1052, 1212, 1258, 1271, 1484, 2436, 3048, 3070
RsaNI GTAC 9 cut(s) 633, 1051, 1211, 1257, 1270, 1483, 2435, 3047, 3069
RseI CAYNNNNRTG 3 cut(s) 650, 1171, 2229
SatI GCNGC 3 cut(s) 94, 2052, 2765
Sau96I GGNCC 8 cut(s) 506, 794, 938, 1808, 2470, 2715, 2716, 2889
ScaI AGTACT 2 cut(s) 1052, 1271
SchI GAGTC 3 cut(s) 1395, 1809, 1844
ScrFI CCNGG 1 cut(s) 1241
SduI GDGCHC 1 cut(s) 2719
SfaNI GCATC 3 cut(s) 819, 1326, 1793
SfcI CTRYAG 4 cut(s) 1830, 2015, 2562, 2623
SfuI TTCGAA 2 cut(s) 1151, 1326
SinI GGWCC 5 cut(s) 506, 938, 1808, 2470, 2889
SmiMI CAYNNNNRTG 3 cut(s) 650, 1171, 2229
SmlI CTYRAG 4 cut(s) 557, 883, 2035, 2953
SmoI CTYRAG 4 cut(s) 557, 883, 2035, 2953
SphI GCATGC 1 cut(s) 2878
SseBI AGGCCT 2 cut(s) 271, 2851
SsiI CCGC 4 cut(s) 1117, 1571, 2764, 2887
SspMI CTAG 9 cut(s) 161, 672, 780, 807, 1791, 2009, 2381, 2879, 2919
StuI AGGCCT 2 cut(s) 271, 2851
StyD4I CCNGG 1 cut(s) 1239
StyI CCWWGG 2 cut(s) 2380, 3050
TaaI ACNGT 9 cut(s) 208, 583, 967, 1289, 1555, 1607, 2249, 2627, 2964
TaiI ACGT 2 cut(s) 2622, 3080
TaqI TCGA 5 cut(s) 411, 1151, 1326, 2680, 2995
TatI WGTACW 6 cut(s) 632, 1050, 1256, 1269, 1482, 2434
TauI GCSGC 1 cut(s) 2767
TfiI GAWTC 6 cut(s) 619, 664, 751, 1750, 2417, 3017
TseFI GTSAC 1 cut(s) 848
TseI GCWGC 2 cut(s) 93, 2051
Tsp45I GTSAC 1 cut(s) 848
TspDTI ATGAA 8 cut(s) 17, 74, 935, 1748, 1921, 2211, 2687, 3027
TspGWI ACGGA 3 cut(s) 1633, 2851, 2884
Van91I CCANNNNNTGG 1 cut(s) 3056
Vha464I CTTAAG 1 cut(s) 883
VpaK11BI GGWCC 5 cut(s) 506, 938, 1808, 2470, 2889
VspI ATTAAT 1 cut(s) 911
XagI CCTNNNNNAGG 1 cut(s) 1794
XapI RAATTY 6 cut(s) 726, 1247, 1322, 1358, 1401, 2740
XceI RCATGY 3 cut(s) 571, 1176, 2878
XmaJI CCTAGG 1 cut(s) 2380
XmiI GTMKAC 6 cut(s) 210, 1550, 1701, 2109, 2283, 2622
XmnI GAANNNNTTC 1 cut(s) 1193
XspI CTAG 9 cut(s) 161, 672, 780, 807, 1791, 2009, 2381, 2879, 2919
ZraI GACGTC 1 cut(s) 2620
ZrmI AGTACT 2 cut(s) 1052, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.