Rw5G008160

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8730359 .. 8737489
7131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008160.1

Sequence Viewer

Length: 3069 bp
ATGGCATTTAGCGTTTTTCCAAAAAGCATCATGACTATGGTCATAATGGTTCTCTGCTTCATCTGCATAAACTCAGTCAGATCAGTTGAAGCACAATCCCCGCGCCTTCCTGTTCAAGAAGTGGAAGCACTGAGAGAAATTGGTTCACAATTGGGAAAAAAAGACTGGAACTTCGACGTAGACCCATGCCACAACGACACCAGCTGGGCTACCCCAACATCTGATCGTTACTCGCTATACACCAACATCGTCTCTTGCAACTGTTCCTACGTCCCTGATGGTGTATGCCACGTCACCAGTATTGTTCTGACAGGGCAAGATCTTGCTGGTGTACTTCCACCATCTATTGCAAAGTTACCCTGCCTTACACAAGTTTCTTTCACAAGGAACTACCTCAGTGGTAACATACCACTTGAATGGGCTTCTACAAAGTTGCAAAACCTGTCCCTTACTGTGAACAACTTATCAGGAACAATCCCTGCATACTTGGGGAACATTACTACCCTAAAACTACTGTTCCTAGACAGTAACCAATTTTATGGAACTGTTCCTCCTGAGCTTGGGAAGCTGGTTAACTTGGAGCGTCTCCTACTCGGTCAAAACAATCTCTCAGGAGAGTTGCCATTGGATCTCTCTAATCTAAATAAATTAAAAGTACTTAAGATTGGCAGTAACAACTTCAATGGAACAATACCTGATTTCTTTGAAAGTTGGAGTCAGCTTCAGAGTTTAGAGATCCAAGCTAGCGGTCTCCAAGGGCCCATTCCGCCTAGCATTTATTCCTTGAATAAATTAAGAATATTAAGGATCAGTGACTTGAGTGGATACAGTTCACCATTTCCAGACTTGACAAATATGACACTTATGCACGTTTTAATGCTAAGGAGCTGCAATCTAGTTGGACCTATCCCTGATTACATATCGAAATTGACAGCATTACGTATATTAGATCTCAGCTTCAACAGATTGGAAGGAAGTATTCCTGACTTTGGAATAGGCATATTGGACAACTTGTGTCTGACACATAACGCCCTCACTGGGTCTATTCCAGAGTTATCTGCACCTCTTCCAGATTGGGTCAAGAGAAATCGCAATAACAGTAACTACTACATGGATATTTCTTACAATAAATTTCCTGAGAGCTCTGAGTTAAATTGTACAGAAAACCTGAACTTGTTCAAAAGCTTTTCTGCACAAGACATCTCATTATCTGGAGGGTGCCTGAAGAAATATCCTTGTCGAGAAGATCGGCTTTCTTTGCATATAAACTGTGGTGGAAGAAACACCACAGTTGGAGGAATCAACTTTGAAGGTGATCAAGACCCAGGAGGTCCATCAGCATTCGTTCCTGCTGGAGCTAACTGGGGATTTAGCAACACTGGACATTTCTGGGATACTGAATTTGGTGAAAAATACACAGCAGATAATACATCTGTACTCCGAATGAGCAACTCTGAGTTGTACACAAATGCACGCCTCTCTCCTCTTTCTCTTACGTATTATGCACGCTGCTTGGCAAATGGAAGTTATACTGTGAGACTTCACTTTTCAGAGATAATAATTAGAGGAAATAGATCTTTCCACAGTCTTGGAATACGGATATTTGATGTTTATATTCAGGAGAAACTGATGTTGAAGGATTTTAACATTGAAGTGGAAGCACAAGGGGTTGATAAAGCAGTCATAAAGGAATTTAAAGCAGTTGAGGTGAAGGATAAAACCTTAGAGATCAGATTTCATTGGTCTGGCAAAGGGACAACAGCGTCCCCGAGAAGAGGAGTATATGGTCCTCTTATATCAGCTATCTCTATAGAGTTTGAGTCCACTCATTCTGGTCTCCGAAAAGAGTCCACTCCTCGTGGTAGCAAAAAGAAGGTATTTACAGTGGCTGGAGCTTCAGTTTTGTGTCTTGTTTTCTTGATTTCAGGCATTCTTTGGTGGAATGGATGTCTGGATAGCAAGACATCCAGGGAAAAAGCTTTGAGAAGACTGGATTTGCAAACTGGCTTTTTCACCTTCAAGCAAATTAGAGCTGCCACTAACAGCTTTGATCCTGTAAACAAAATTGGGGAGGGTGGTTTTGGCTCTGTCTACAAGGGTATATTATTGGATGGTACTATAATTGCGGTCAAGCAACTATCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTGCAACATCCAAATCTTGTTAGATTGTATGGATGTTGTATTGAAGCAAATGAATTACTGTTGGTGTATGAATATATGGAAAACAATAGTCTTGCAGGCGCTTTATTTGGCCCAGAGGAAAGTCCACTCAAATTGGACTGGCCTACAAGGCAGAAAATATGCCTGGGCATAGCAAAAGGTCTGGCTTTTCTGCATGAGGAGTCAGCGTTGAAGGTTGTACATAGAGACATCAAAACTACAAATGTATTACTGGACAAAGATCTTAATGCTAAGATCTCAGACTTTGGTCTGGCAAAGCTTGATGAAGAAGAGAACACCCACATTAGCACAAGAGTTGCTGGAACTATAGGATACATGGCGCCAGAATACGCACTATGGGGTTATTTAACCTTCAAAGCAGATGTCTTTAGTTTTGGTGTTGTTGCATTGGAAATAGTTGCTGGAAAGAACAACATGAAATTTCGACCAAATGAGGATTTTGTAGGCCTTGTGGATTGGGCTCTTGTTTTACAACAAAAAGAGAGTTTAGTGGAGCTTGTGGATCCAAGGTTAGGGTCAGATTTCAGTAACGAAGAGGCGGTTAGAATGGTTAAAGTAGCTCTGCTATGCATCAATCCGGTAGCTGCACTTAGGCCTACCATGTCTGCAGTCGTGAGTATGCTTGAAGGGCGAACCCCTGTCGATGAATTGATTATGGATCCAAATATATATAGTGAAGAAATGAGGTTAACAGCTTTGAGAAATCCATTTGAGCAGATTGCACAAGAGAGAGCAGGTGGAAGTCAAAGCTTGATACATTCGTCCGATGCATCATGGAATGATTCTTCTGCTCCTACTATATCTTCAGATCTCTATATAATCAATCCTTAG

Protein Analysis

1022

Amino Acids

113.03

Weight (kDa)

5.95

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 419 - 602 1.9e-35 Malectin domain
Pkinase PF00069 686 - 886 3.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 687 - 906 1.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2963
AasI GACNNNNNNGTC 1 cut(s) 1762
Acc36I ACCTGC 1 cut(s) 2963
AccB1I GGYRCC 2 cut(s) 1218, 2557
AccI GTMKAC 2 cut(s) 180, 2091
AccII CGCG 1 cut(s) 103
AciI CCGC 5 cut(s) 101, 747, 767, 2126, 2777
AclWI GGATC 8 cut(s) 636, 730, 815, 2045, 2735, 2748, 2891, 2904
AcsI RAATTY 5 cut(s) 1130, 1400, 1691, 2168, 2657
AcuI CTGAAG 4 cut(s) 707, 1244, 1881, 3027
AcyI GRCGYC 1 cut(s) 2558
AfaI GTAC 7 cut(s) 333, 657, 1159, 1437, 1463, 2116, 2418
AfiI CCNNNNNNNGG 5 cut(s) 560, 989, 1038, 1775, 2750
AflII CTTAAG 1 cut(s) 659
AjiI CACGTC 1 cut(s) 292
AjnI CCWGG 3 cut(s) 1324, 1967, 2361
AjuI GAANNNNNNNTTGG 2 cut(s) 747, 779
AloI GAACNNNNNNTCC 2 cut(s) 535, 567
Alw21I GWGCWC 1 cut(s) 1145
Alw26I GTCTC 6 cut(s) 256, 590, 755, 1531, 1841, 2418
AlwI GGATC 8 cut(s) 636, 730, 815, 2045, 2735, 2748, 2891, 2904
AlwNI CAGNNNCTG 1 cut(s) 1889
Ama87I CYCGRG 1 cut(s) 1768
AoxI GGCC 5 cut(s) 758, 2308, 2339, 2683, 2831
ApaI GGGCCC 1 cut(s) 762
ApeKI GCWGC 4 cut(s) 888, 1509, 2033, 2822
ApoI RAATTY 5 cut(s) 1130, 1400, 1691, 2168, 2657
ArsI GACNNNNNNTTYG 4 cut(s) 155, 187, 2586, 2618
Asp700I GAANNNNTTC 1 cut(s) 1175
AspLEI GCGC 3 cut(s) 105, 2300, 2560
AspS9I GGNCC 6 cut(s) 758, 759, 902, 1331, 1787, 2309
AsuHPI GGTGA 6 cut(s) 286, 825, 1325, 1418, 1720, 2005
AsuNHI GCTAGC 1 cut(s) 743
AvaI CYCGRG 1 cut(s) 1768
AvaII GGWCC 3 cut(s) 902, 1331, 1787
BaeGI GKGCMC 1 cut(s) 762
BaeI ACNNNNGTAYC 2 cut(s) 2984, 3017
BamHI GGATCC 2 cut(s) 2740, 2896
BanI GGYRCC 2 cut(s) 1218, 2557
BanII GRGCYC 3 cut(s) 762, 1145, 2701
BauI CACGAG 1 cut(s) 1857
BbsI GAAGAC 1 cut(s) 1993
Bbv12I GWGCWC 1 cut(s) 1145
BbvI GCAGC 4 cut(s) 875, 1496, 2020, 2809
BccI CCATC 4 cut(s) 272, 349, 1342, 2105
BcgI CGANNNNNNTGC 2 cut(s) 2144, 2178
BciT130I CCWGG 3 cut(s) 1326, 1969, 2363
BciVI GTATCC 3 cut(s) 818, 1387, 2543
BclI TGATCA 1 cut(s) 1315
BcoDI GTCTC 6 cut(s) 256, 590, 755, 1531, 1841, 2418
BfaI CTAG 4 cut(s) 521, 744, 771, 896
BfmI CTRYAG 3 cut(s) 1809, 2544, 2844
BfoI RGCGCY 2 cut(s) 2301, 2561
BfrI CTTAAG 1 cut(s) 659
BfuAI ACCTGC 1 cut(s) 2963
BfuI GTATCC 3 cut(s) 818, 1387, 2543
BglI GCCNNNNNGGC 1 cut(s) 2347
BglII AGATCT 6 cut(s) 319, 949, 1574, 2458, 2472, 3046
BisI GCNGC 4 cut(s) 889, 1510, 2034, 2823
BlsI GCNGC 4 cut(s) 890, 1511, 2035, 2824
BmcAI AGTACT 1 cut(s) 657
Bme1390I CCNGG 3 cut(s) 1326, 1969, 2363
Bme18I GGWCC 3 cut(s) 902, 1331, 1787
BmeT110I CYCGRG 1 cut(s) 1768
BmgBI CACGTC 1 cut(s) 292
BmgT120I GGNCC 6 cut(s) 758, 759, 902, 1331, 1787, 2309
BmiI GGNNCC 5 cut(s) 760, 1220, 2559, 2742, 2898
BmrFI CCNGG 3 cut(s) 1326, 1969, 2363
BmrI ACTGGG 2 cut(s) 1047, 1372
BmsI GCATC 4 cut(s) 36, 2817, 2995, 3017
BmtI GCTAGC 1 cut(s) 747
BmuI ACTGGG 2 cut(s) 1047, 1372
BoxI GACNNNNGTC 2 cut(s) 38, 2484
BpiI GAAGAC 1 cut(s) 1993
BpmI CTGGAG 3 cut(s) 1233, 1374, 1911
Bpu10I CCTNAGC 2 cut(s) 555, 881
BpuEI CTTGAG 1 cut(s) 838
BsaAI YACGTR 2 cut(s) 941, 1497
BsaHI GRCGYC 1 cut(s) 2558
BsaI GGTCTC 2 cut(s) 755, 1841
BsaJI CCNNGG 5 cut(s) 754, 1324, 1968, 2362, 2744
BsaWI WCCGGW 1 cut(s) 2815
BsaXI ACNNNNNCTCC 6 cut(s) 535, 565, 1884, 1914, 2390, 2420
Bsc4I CCNNNNNNNGG 5 cut(s) 560, 989, 1038, 1775, 2750
Bse1I ACTGG 9 cut(s) 170, 297, 1042, 1367, 1384, 1995, 2008, 2342, 2454
BseBI CCWGG 3 cut(s) 1326, 1969, 2363
BseDI CCNNGG 5 cut(s) 754, 1324, 1968, 2362, 2744
BseGI GGATG 5 cut(s) 1952, 1964, 2116, 2206, 2237
BseLI CCNNNNNNNGG 5 cut(s) 560, 989, 1038, 1775, 2750
BseNI ACTGG 9 cut(s) 170, 297, 1042, 1367, 1384, 1995, 2008, 2342, 2454
BseRI GAGGAG 4 cut(s) 1473, 1791, 1845, 2411
BseSI GKGCMC 1 cut(s) 762
BseXI GCAGC 4 cut(s) 875, 1496, 2020, 2809
BseYI CCCAGC 1 cut(s) 204
BsgI GTGCAG 3 cut(s) 1044, 1176, 2808
Bsh1236I CGCG 1 cut(s) 103
BshFI GGCC 5 cut(s) 760, 2310, 2341, 2685, 2833
BshNI GGYRCC 2 cut(s) 1218, 2557
BsiHKAI GWGCWC 1 cut(s) 1145
BsiHKCI CYCGRG 1 cut(s) 1768
BsiSI CCGG 1 cut(s) 2816
BslFI GGGAC 4 cut(s) 257, 430, 1750, 1768
BslI CCNNNNNNNGG 5 cut(s) 560, 989, 1038, 1775, 2750
BsmAI GTCTC 6 cut(s) 256, 590, 755, 1531, 1841, 2418
BsmBI CGTCTC 2 cut(s) 256, 590
BsmFI GGGAC 4 cut(s) 257, 430, 1750, 1768
BsmI GAATGC 2 cut(s) 1340, 1929
BsnI GGCC 5 cut(s) 760, 2310, 2341, 2685, 2833
Bso31I GGTCTC 2 cut(s) 755, 1841
BsoBI CYCGRG 1 cut(s) 1768
Bsp120I GGGCCC 1 cut(s) 758
Bsp1286I GDGCHC 3 cut(s) 762, 1145, 2701
Bsp1407I TGTACA 3 cut(s) 1157, 1461, 2416
BspACI CCGC 5 cut(s) 101, 747, 767, 2126, 2777
BspANI GGCC 5 cut(s) 760, 2310, 2341, 2685, 2833
BspFNI CGCG 1 cut(s) 103
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 5 cut(s) 760, 1220, 2559, 2742, 2898
BspMAI CTGCAG 1 cut(s) 2848
BspMI ACCTGC 1 cut(s) 2963
BspOI GCTAGC 1 cut(s) 747
BspPI GGATC 8 cut(s) 636, 730, 815, 2045, 2735, 2748, 2891, 2904
BspT107I GGYRCC 2 cut(s) 1218, 2557
BspTI CTTAAG 1 cut(s) 659
BspTNI GGTCTC 2 cut(s) 755, 1841
BsrGI TGTACA 3 cut(s) 1157, 1461, 2416
BsrI ACTGG 9 cut(s) 170, 297, 1042, 1367, 1384, 1995, 2008, 2342, 2454
BssECI CCNNGG 5 cut(s) 754, 1324, 1968, 2362, 2744
BssNI GRCGYC 1 cut(s) 2558
BssSI CACGAG 1 cut(s) 1857
BssT1I CCWWGG 2 cut(s) 754, 2744
Bst2BI CACGAG 1 cut(s) 1857
Bst2UI CCWGG 3 cut(s) 1326, 1969, 2363
Bst6I CTCTTC 4 cut(s) 1071, 1768, 2502, 2766
BstACI GRCGYC 1 cut(s) 2558
BstAFI CTTAAG 1 cut(s) 659
BstAUI TGTACA 3 cut(s) 1157, 1461, 2416
BstBAI YACGTR 2 cut(s) 941, 1497
BstC8I GCNNGC 4 cut(s) 745, 1474, 1507, 2296
BstF5I GGATG 5 cut(s) 1952, 1964, 2116, 2206, 2237
BstFNI CGCG 1 cut(s) 103
BstH2I RGCGCY 2 cut(s) 2301, 2561
BstHHI GCGC 3 cut(s) 105, 2300, 2560
BstMAI GTCTC 6 cut(s) 256, 590, 755, 1531, 1841, 2418
BstMWI GCNNNNNNNGC 6 cut(s) 63, 565, 766, 1258, 2347, 2866
BstNI CCWGG 3 cut(s) 1326, 1969, 2363
BstPAI GACNNNNGTC 2 cut(s) 38, 2484
BstSCI CCNGG 3 cut(s) 1324, 1967, 2361
BstSFI CTRYAG 3 cut(s) 1809, 2544, 2844
BstSLI GKGCMC 1 cut(s) 762
BstSNI TACGTA 2 cut(s) 941, 1497
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 4 cut(s) 875, 1496, 2020, 2809
BstV2I GAAGAC 1 cut(s) 1993
BstXI CCANNNNNNTGG 3 cut(s) 417, 539, 1589
BsuI GTATCC 3 cut(s) 818, 1387, 2543
BsuRI GGCC 5 cut(s) 760, 2310, 2341, 2685, 2833
BtrI CACGTC 1 cut(s) 292
BtsCI GGATG 5 cut(s) 1952, 1964, 2116, 2206, 2237
BtsIMutI CAGTG 6 cut(s) 128, 403, 817, 1035, 1377, 1890
BveI ACCTGC 1 cut(s) 2963
Cac8I GCNNGC 4 cut(s) 745, 1474, 1507, 2296
CaiI CAGNNNCTG 1 cut(s) 1889
CciI TCATGA 1 cut(s) 30
CfoI GCGC 3 cut(s) 105, 2300, 2560
Cfr13I GGNCC 6 cut(s) 758, 759, 902, 1331, 1787, 2309
CseI GACGC 2 cut(s) 572, 1752
Csp6I GTAC 7 cut(s) 332, 656, 1158, 1436, 1462, 2115, 2417
CspCI CAANNNNNGTGG 2 cut(s) 2313, 2348
CviAII CATG 9 cut(s) 31, 186, 1111, 2188, 2393, 2554, 2653, 2839, 3012
CviQI GTAC 7 cut(s) 332, 656, 1158, 1436, 1462, 2115, 2417
DinI GGCGCC 1 cut(s) 2559
DraI TTTAAA 1 cut(s) 1696
DrdI GACNNNNNNGTC 1 cut(s) 1762
DseDI GACNNNNNNGTC 1 cut(s) 1762
Eam1104I CTCTTC 4 cut(s) 1071, 1768, 2502, 2766
EarI CTCTTC 4 cut(s) 1071, 1768, 2502, 2766
EciI GGCGGA 1 cut(s) 756
Ecl136II GAGCTC 1 cut(s) 1143
Eco105I TACGTA 2 cut(s) 941, 1497
Eco130I CCWWGG 2 cut(s) 754, 2744
Eco147I AGGCCT 2 cut(s) 2685, 2833
Eco24I GRGCYC 3 cut(s) 762, 1145, 2701
Eco31I GGTCTC 2 cut(s) 755, 1841
Eco47I GGWCC 3 cut(s) 902, 1331, 1787
Eco53kI GAGCTC 1 cut(s) 1143
Eco57I CTGAAG 4 cut(s) 707, 1244, 1881, 3027
Eco88I CYCGRG 1 cut(s) 1768
EcoICRI GAGCTC 1 cut(s) 1143
EcoO109I RGGNCCY 1 cut(s) 758
EcoRII CCWGG 3 cut(s) 1324, 1967, 2361
EcoT14I CCWWGG 2 cut(s) 754, 2744
EcoT22I ATGCAT 2 cut(s) 2810, 3010
EcoT38I GRGCYC 3 cut(s) 762, 1145, 2701
EgeI GGCGCC 1 cut(s) 2559
EheI GGCGCC 1 cut(s) 2559
ErhI CCWWGG 2 cut(s) 754, 2744
Esp3I CGTCTC 2 cut(s) 256, 590
FaeI CATG 9 cut(s) 34, 189, 1114, 2191, 2396, 2557, 2656, 2842, 3015
FalI AAGNNNNNCTT 2 cut(s) 1236, 1268
FaqI GGGAC 4 cut(s) 257, 430, 1750, 1768
FatI CATG 9 cut(s) 30, 185, 1110, 2187, 2392, 2553, 2652, 2838, 3011
FauI CCCGC 1 cut(s) 108
FbaI TGATCA 1 cut(s) 1315
FblI GTMKAC 2 cut(s) 180, 2091
Fnu4HI GCNGC 4 cut(s) 889, 1510, 2034, 2823
FokI GGATG 5 cut(s) 1951, 1959, 2123, 2193, 2244
FriOI GRGCYC 3 cut(s) 762, 1145, 2701
Fsp4HI GCNGC 4 cut(s) 889, 1510, 2034, 2823
FspBI CTAG 4 cut(s) 521, 744, 771, 896
GlaI GCGC 3 cut(s) 104, 2299, 2559
GluI GCNGC 4 cut(s) 889, 1510, 2034, 2823
GsaI CCCAGC 1 cut(s) 208
GsuI CTGGAG 3 cut(s) 1233, 1374, 1911
HaeII RGCGCY 2 cut(s) 2301, 2561
HaeIII GGCC 5 cut(s) 760, 2310, 2341, 2685, 2833
HapII CCGG 1 cut(s) 2816
HgaI GACGC 2 cut(s) 572, 1752
HhaI GCGC 3 cut(s) 105, 2300, 2560
Hin1I GRCGYC 1 cut(s) 2558
Hin1II CATG 9 cut(s) 34, 189, 1114, 2191, 2396, 2557, 2656, 2842, 3015
Hin6I GCGC 3 cut(s) 103, 2298, 2558
HinP1I GCGC 3 cut(s) 103, 2298, 2558
HincII GTYRAC 2 cut(s) 574, 2928
HindII GTYRAC 2 cut(s) 574, 2928
HindIII AAGCTT 4 cut(s) 1183, 1977, 2495, 2986
HinfI GANTC 6 cut(s) 715, 1299, 1820, 1847, 2399, 3020
HpaI GTTAAC 2 cut(s) 574, 2928
HpaII CCGG 1 cut(s) 2816
HphI GGTGA 6 cut(s) 286, 825, 1325, 1418, 1720, 2005
Hpy99I CGWCG 1 cut(s) 179
HpyCH4IV ACGT 6 cut(s) 177, 270, 291, 870, 940, 1496
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 565, 766, 1258, 2347, 2866
HpySE526I ACGT 6 cut(s) 177, 270, 291, 870, 940, 1496
Hsp92I GRCGYC 1 cut(s) 2558
Hsp92II CATG 9 cut(s) 34, 189, 1114, 2191, 2396, 2557, 2656, 2842, 3015
HspAI GCGC 3 cut(s) 103, 2298, 2558
KasI GGCGCC 1 cut(s) 2557
Ksp22I TGATCA 1 cut(s) 1315
KspAI GTTAAC 2 cut(s) 574, 2928
LmnI GCTCC 6 cut(s) 580, 885, 1355, 1892, 2731, 3034
Lsp1109I GCAGC 4 cut(s) 875, 1496, 2020, 2809
LweI GCATC 4 cut(s) 36, 2817, 2995, 3017
MaeI CTAG 4 cut(s) 521, 744, 771, 896
MaeII ACGT 6 cut(s) 177, 270, 291, 870, 940, 1496
MaeIII GTNAC 9 cut(s) 227, 292, 354, 401, 527, 671, 812, 1100, 2765
MfeI CAATTG 1 cut(s) 149
MhlI GDGCHC 3 cut(s) 762, 1145, 2701
Mly113I GGCGCC 1 cut(s) 2558
MlyI GAGTC 4 cut(s) 724, 1829, 1856, 2408
MmeI TCCRAC 3 cut(s) 692, 880, 1273
Mph1103I ATGCAT 2 cut(s) 2810, 3010
MroXI GAANNNNTTC 1 cut(s) 1175
MslI CAYNNNNRTG 3 cut(s) 35, 415, 1652
MspA1I CMGCKG 1 cut(s) 204
MspCI CTTAAG 1 cut(s) 659
MspI CCGG 1 cut(s) 2816
MspR9I CCNGG 3 cut(s) 1326, 1969, 2363
MunI CAATTG 1 cut(s) 149
Mva1269I GAATGC 2 cut(s) 1340, 1929
MvaI CCWGG 3 cut(s) 1326, 1969, 2363
MvnI CGCG 1 cut(s) 103
MwoI GCNNNNNNNGC 6 cut(s) 63, 565, 766, 1258, 2347, 2866
NarI GGCGCC 1 cut(s) 2558
NheI GCTAGC 1 cut(s) 743
NlaIII CATG 9 cut(s) 34, 189, 1114, 2191, 2396, 2557, 2656, 2842, 3015
NlaIV GGNNCC 5 cut(s) 760, 1220, 2559, 2742, 2898
NmuCI GTSAC 2 cut(s) 292, 812
NsiI ATGCAT 2 cut(s) 2810, 3010
PagI TCATGA 1 cut(s) 30
PaqCI CACCTGC 1 cut(s) 2963
PceI AGGCCT 2 cut(s) 2685, 2833
PctI GAATGC 2 cut(s) 1340, 1929
PdmI GAANNNNTTC 1 cut(s) 1175
PfeI GAWTC 2 cut(s) 1299, 3020
PkrI GCNGC 4 cut(s) 890, 1511, 2035, 2824
PleI GAGTC 4 cut(s) 723, 1828, 1855, 2407
PluTI GGCGCC 1 cut(s) 2561
PpsI GAGTC 4 cut(s) 723, 1828, 1855, 2407
Ppu21I YACGTR 2 cut(s) 941, 1497
PshAI GACNNNNGTC 2 cut(s) 38, 2484
Psp124BI GAGCTC 1 cut(s) 1145
Psp6I CCWGG 3 cut(s) 1324, 1967, 2361
PspFI CCCAGC 1 cut(s) 204
PspGI CCWGG 3 cut(s) 1324, 1967, 2361
PspN4I GGNNCC 5 cut(s) 760, 1220, 2559, 2742, 2898
PspOMI GGGCCC 1 cut(s) 758
PspPI GGNCC 6 cut(s) 758, 759, 902, 1331, 1787, 2309
PstI CTGCAG 1 cut(s) 2848
PstNI CAGNNNCTG 1 cut(s) 1889
PvuII CAGCTG 1 cut(s) 204
RsaI GTAC 7 cut(s) 333, 657, 1159, 1437, 1463, 2116, 2418
RsaNI GTAC 7 cut(s) 332, 656, 1158, 1436, 1462, 2115, 2417
RseI CAYNNNNRTG 3 cut(s) 35, 415, 1652
SacI GAGCTC 1 cut(s) 1145
SatI GCNGC 4 cut(s) 889, 1510, 2034, 2823
Sau96I GGNCC 6 cut(s) 758, 759, 902, 1331, 1787, 2309
ScaI AGTACT 1 cut(s) 657
SchI GAGTC 4 cut(s) 724, 1829, 1856, 2408
ScrFI CCNGG 3 cut(s) 1326, 1969, 2363
SduI GDGCHC 3 cut(s) 762, 1145, 2701
SfaNI GCATC 4 cut(s) 36, 2817, 2995, 3017
SfcI CTRYAG 3 cut(s) 1809, 2544, 2844
SfoI GGCGCC 1 cut(s) 2559
SinI GGWCC 3 cut(s) 902, 1331, 1787
SmiMI CAYNNNNRTG 3 cut(s) 35, 415, 1652
SmlI CTYRAG 2 cut(s) 659, 817
SmoI CTYRAG 2 cut(s) 659, 817
SnaBI TACGTA 2 cut(s) 941, 1497
SseBI AGGCCT 2 cut(s) 2685, 2833
SsiI CCGC 5 cut(s) 101, 747, 767, 2126, 2777
SspDI GGCGCC 1 cut(s) 2557
SspI AATATT 1 cut(s) 801
SspMI CTAG 4 cut(s) 521, 744, 771, 896
SstI GAGCTC 1 cut(s) 1145
StuI AGGCCT 2 cut(s) 2685, 2833
StyD4I CCNGG 3 cut(s) 1324, 1967, 2361
StyI CCWWGG 2 cut(s) 754, 2744
TaiI ACGT 6 cut(s) 180, 273, 294, 873, 943, 1499
TaqI TCGA 5 cut(s) 174, 923, 1240, 2662, 2880
TaqII GACCGA 1 cut(s) 584
TatI WGTACW 6 cut(s) 331, 655, 1157, 1435, 1461, 2416
TfiI GAWTC 2 cut(s) 1299, 3020
TscAI CASTG 6 cut(s) 135, 403, 817, 1042, 1384, 1890
TseFI GTSAC 2 cut(s) 292, 812
TseI GCWGC 4 cut(s) 888, 1509, 2033, 2822
Tsp45I GTSAC 2 cut(s) 292, 812
TspDTI ATGAA 7 cut(s) 49, 1727, 2265, 2283, 2517, 2669, 2898
TspGWI ACGGA 1 cut(s) 1612
TspRI CASTG 6 cut(s) 135, 403, 817, 1042, 1384, 1890
Vha464I CTTAAG 1 cut(s) 659
VpaK11BI GGWCC 3 cut(s) 902, 1331, 1787
XapI RAATTY 5 cut(s) 1130, 1400, 1691, 2168, 2657
XmiI GTMKAC 2 cut(s) 180, 2091
XmnI GAANNNNTTC 1 cut(s) 1175
XspI CTAG 4 cut(s) 521, 744, 771, 896
ZrmI AGTACT 1 cut(s) 657
Zsp2I ATGCAT 2 cut(s) 2810, 3010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.