Rorug05G0000400

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
44777 .. 51932
7156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0000400.1

Sequence Viewer

Length: 1611 bp
ATGGACGACCAACACCAGCTGATGGCGATGCAGATATCACCGGCCGATTCCAATGGTACCACTCCGGCCAAGGAGCAGCAGGCCGCCGGAGTTGGCATTCTTCTCCAGATCATGATGCTCGTCCTCTCTTTTGTCCTAGGTCATGTCCTCCGCCGCCACAAATTCTATTATCTCCCCGAGGCCAGCGCTTCGCTTTTGATAGGTTTAATTGTTGGTGGACTTGCTAACATCTCTGATACCGAAACTAGCATCAGGGCCTGGTTCAATTTTCACGAGGAGTTCTTCTTTCTCTTCCTTCTACCTCCCATCATATTTCAGTCTGGCTTCAGTCTTTCACCTAAACCTTTCTTCTCTAACTTTGGAGCCATTGTCACTTTCGCTATCCTTGGAACCTTTATAGCTTCTGTTGTCACTGGTGTTCTAGTCTACCTTGGCGGTCTGATATACCTCACCTACAGGCTTCCATTTGTGGAGTGCTTGATGTTTGGTGCTCTTATATCAGCGACCGATCCAGTCACTGTCTTGTCCATCTTTCAGGAACTTGGCACAGATATGAACTTGTATGCTCTGGTGTTTGGGGAATCTGTTTTGAATGATGCGATGGCAATTTCCTTGTACAGGACGATGTCCCTGGTCAGGAGTCATGCATCATCTGGAGAAAACTTCTTCATGGTTATCGTCAGGTTTCTTGAGACCTTTGTCGGTTCAATGTCTGCAGGCATCGGAGTTGGCTTTACTTCTGCTTTGCTTTTCAAGTATGCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGTGCTGTCTTTTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGGCTCTCTGGTATTGTGTCAATATTGTTCACAGGAATGGTCATGAAGCATTACACGTATTCAAATTTGTCAGAGAACTCTCAACGATTTGTTTCAGCCTTTTTCCATTTGATCTCATCACTAGCAGAGACATTTGTATTTATATACATGGGCTTTGATATCGCCATGGAAAAGCATAGCTGGTCACATGTTGGATTCATTTTTTTCTCAATTATATTTATTGGAGTAGCAAGGGCAGTTAATGTTTTTTCTTGTGCATATTTGGTCAACTTATCTCGACCTTCACATAGACAGATACCAGTAAAACATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGGGCCATGGCTTTTGCCCTCGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGTCAGACTATATTCACTGCAACTACTGCGATAGTTGTTCTGACGGTATTATTAATTGGAGGTTCAACGGGTACAATGCTGGAAGCTTTACAAGTTGTAGGTGATGAGAGTACATTGGGTGAAAGCTTTGATGGTAACAATGGCTACGTGGCTCCTTCTTATGACGATGACGAGGAAGGATCATCAGGAAACAGGATCAAGATGAAACTGAAGGAATTCCACAAGAGTGCAGCTTCATTCACAGCTTTGGATCGAAACTATCTCACCCCGTTCTTTACAAGTCAGAATGGCGATGAAGCAGAAGAGTTTGATGAGCCTATGTCTAGCTCTACAAGACCAGTTGGTGGTTTCCACGGTCATGGCTAA

Protein Analysis

536

Amino Acids

58.81

Weight (kDa)

5.26

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 44 - 443 1.8e-64 Sodium/hydrogen exchanger, transmembrane
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 56
AccB1I GGYRCC 1 cut(s) 56
AccB7I CCANNNNNTGG 2 cut(s) 22, 1589
AccI GTMKAC 1 cut(s) 426
AciI CCGC 4 cut(s) 84, 151, 154, 435
AclWI GGATC 4 cut(s) 503, 1432, 1448, 1503
AcoI YGGCCR 2 cut(s) 42, 66
AcsI RAATTY 3 cut(s) 161, 913, 1460
AcuI CTGAAG 3 cut(s) 310, 767, 1475
AfaI GTAC 6 cut(s) 58, 617, 830, 1175, 1318, 1357
AfeI AGCGCT 1 cut(s) 187
AfiI CCNNNNNNNGG 4 cut(s) 22, 618, 636, 1589
AflIII ACRYGT 2 cut(s) 903, 1036
AgsI TTSAA 6 cut(s) 265, 592, 708, 754, 912, 1311
AjnI CCWGG 2 cut(s) 257, 630
AleI CACNNNNGTG 1 cut(s) 1470
AluBI AGCT 8 cut(s) 19, 401, 1029, 1331, 1371, 1478, 1490, 1572
AluI AGCT 8 cut(s) 19, 401, 1029, 1331, 1371, 1478, 1490, 1572
Alw21I GWGCWC 1 cut(s) 493
Alw26I GTCTC 2 cut(s) 686, 971
AlwI GGATC 4 cut(s) 503, 1432, 1448, 1503
AlwNI CAGNNNCTG 2 cut(s) 258, 518
Ama87I CYCGRG 1 cut(s) 176
Aor51HI AGCGCT 1 cut(s) 187
AoxI GGCC 6 cut(s) 42, 66, 81, 180, 255, 1191
ApeKI GCWGC 2 cut(s) 76, 1475
ApoI RAATTY 3 cut(s) 161, 913, 1460
AseI ATTAAT 1 cut(s) 1298
Asp700I GAANNNNTTC 1 cut(s) 1460
Asp718I GGTACC 1 cut(s) 56
AspA2I CCTAGG 1 cut(s) 136
AspLEI GCGC 1 cut(s) 188
AspS9I GGNCC 2 cut(s) 255, 1191
AsuHPI GGTGA 6 cut(s) 30, 327, 442, 1358, 1376, 1501
AvaI CYCGRG 1 cut(s) 176
AvrII CCTAGG 1 cut(s) 136
BanI GGYRCC 1 cut(s) 56
BanII GRGCYC 1 cut(s) 855
BauI CACGAG 1 cut(s) 272
Bbv12I GWGCWC 1 cut(s) 493
BbvI GCAGC 2 cut(s) 88, 1487
BccI CCATC 5 cut(s) 16, 314, 536, 595, 1370
BciT130I CCWGG 2 cut(s) 259, 632
BcoDI GTCTC 2 cut(s) 686, 971
BfaI CTAG 5 cut(s) 137, 246, 422, 971, 1569
BfmI CTRYAG 2 cut(s) 454, 714
BfoI RGCGCY 1 cut(s) 189
BisI GCNGC 4 cut(s) 77, 84, 154, 1476
BlnI CCTAGG 1 cut(s) 136
BlsI GCNGC 4 cut(s) 78, 85, 155, 1477
Bme1390I CCNGG 2 cut(s) 259, 632
BmeT110I CYCGRG 1 cut(s) 176
BmgT120I GGNCC 2 cut(s) 255, 1191
BmiI GGNNCC 5 cut(s) 58, 364, 391, 1192, 1398
BmrFI CCNGG 2 cut(s) 259, 632
BmsI GCATC 6 cut(s) 18, 105, 258, 586, 656, 729
BoxI GACNNNNGTC 1 cut(s) 698
BpmI CTGGAG 2 cut(s) 89, 675
BpuEI CTTGAG 1 cut(s) 710
BsaAI YACGTR 2 cut(s) 906, 1393
BsaI GGTCTC 1 cut(s) 686
BsaJI CCNNGG 9 cut(s) 69, 136, 177, 385, 430, 630, 1014, 1194, 1597
BsaXI ACNNNNNCTCC 2 cut(s) 354, 384
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 618, 636, 1589
Bse118I RCCGGY 1 cut(s) 40
Bse1I ACTGG 4 cut(s) 418, 512, 1148, 1583
BseBI CCWGG 2 cut(s) 259, 632
BseDI CCNNGG 9 cut(s) 69, 136, 177, 385, 430, 630, 1014, 1194, 1597
BseLI CCNNNNNNNGG 4 cut(s) 22, 618, 636, 1589
BseNI ACTGG 4 cut(s) 418, 512, 1148, 1583
BseRI GAGGAG 1 cut(s) 290
BseX3I CGGCCG 1 cut(s) 42
BseXI GCAGC 2 cut(s) 88, 1487
BsgI GTGCAG 1 cut(s) 1494
Bsh1285I CGRYCG 2 cut(s) 45, 507
BshFI GGCC 6 cut(s) 44, 68, 83, 182, 257, 1193
BshNI GGYRCC 1 cut(s) 56
BsiEI CGRYCG 2 cut(s) 45, 507
BsiHKAI GWGCWC 1 cut(s) 493
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 3 cut(s) 41, 65, 87
BslFI GGGAC 1 cut(s) 613
BslI CCNNNNNNNGG 4 cut(s) 22, 618, 636, 1589
BsmAI GTCTC 2 cut(s) 686, 971
BsmFI GGGAC 1 cut(s) 613
BsmI GAATGC 1 cut(s) 96
BsnI GGCC 6 cut(s) 44, 68, 83, 182, 257, 1193
Bso31I GGTCTC 1 cut(s) 686
BsoBI CYCGRG 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 493, 855
Bsp1407I TGTACA 1 cut(s) 615
Bsp143I GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
Bsp19I CCATGG 2 cut(s) 1014, 1194
BspACI CCGC 4 cut(s) 84, 151, 154, 435
BspANI GGCC 6 cut(s) 44, 68, 83, 182, 257, 1193
BspHI TCATGA 3 cut(s) 111, 891, 1225
BspLI GGNNCC 5 cut(s) 58, 364, 391, 1192, 1398
BspMAI CTGCAG 1 cut(s) 718
BspPI GGATC 4 cut(s) 503, 1432, 1448, 1503
BspT107I GGYRCC 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 686
BsrFI RCCGGY 1 cut(s) 40
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 4 cut(s) 418, 512, 1148, 1583
BssAI RCCGGY 1 cut(s) 40
BssECI CCNNGG 9 cut(s) 69, 136, 177, 385, 430, 630, 1014, 1194, 1597
BssMI GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
BssSI CACGAG 1 cut(s) 272
BssT1I CCWWGG 6 cut(s) 69, 136, 385, 430, 1014, 1194
Bst2BI CACGAG 1 cut(s) 272
Bst2UI CCWGG 2 cut(s) 259, 632
Bst4CI ACNGT 4 cut(s) 520, 1178, 1291, 1601
Bst6I CTCTTC 2 cut(s) 296, 1542
BstAPI GCANNNNNTGC 1 cut(s) 1271
BstAUI TGTACA 1 cut(s) 615
BstBAI YACGTR 2 cut(s) 906, 1393
BstC8I GCNNGC 4 cut(s) 81, 184, 718, 837
BstDSI CCRYGG 3 cut(s) 1014, 1194, 1597
BstENI CCTNNNNNAGG 1 cut(s) 616
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 1 cut(s) 188
BstKTI GATC 7 cut(s) 111, 511, 963, 1231, 1427, 1443, 1498
BstMAI GTCTC 2 cut(s) 686, 971
BstMBI GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
BstMCI CGRYCG 2 cut(s) 45, 507
BstMWI GCNNNNNNNGC 1 cut(s) 1271
BstNI CCWGG 2 cut(s) 259, 632
BstNSI RCATGY 2 cut(s) 835, 1040
BstPAI GACNNNNGTC 1 cut(s) 698
BstSCI CCNGG 2 cut(s) 257, 630
BstSFI CTRYAG 2 cut(s) 454, 714
BstV1I GCAGC 2 cut(s) 88, 1487
BstXI CCANNNNNNTGG 1 cut(s) 1604
BstZI CGGCCG 1 cut(s) 42
BsuRI GGCC 6 cut(s) 44, 68, 83, 182, 257, 1193
BtgI CCRYGG 3 cut(s) 1014, 1194, 1597
BtgZI GCGATG 3 cut(s) 41, 614, 1551
BtsI GCAGTG 1 cut(s) 1260
BtsIMutI CAGTG 4 cut(s) 411, 516, 1183, 1260
Cac8I GCNNGC 4 cut(s) 81, 184, 718, 837
CaiI CAGNNNCTG 2 cut(s) 258, 518
CciI TCATGA 3 cut(s) 111, 891, 1225
CfoI GCGC 1 cut(s) 188
Cfr10I RCCGGY 1 cut(s) 40
Cfr13I GGNCC 2 cut(s) 255, 1191
Csp6I GTAC 6 cut(s) 57, 616, 829, 1174, 1317, 1356
CviQI GTAC 6 cut(s) 57, 616, 829, 1174, 1317, 1356
DpnI GATC 7 cut(s) 110, 510, 962, 1230, 1426, 1442, 1497
DpnII GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
EaeI YGGCCR 2 cut(s) 42, 66
EagI CGGCCG 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 296, 1542
EarI CTCTTC 2 cut(s) 296, 1542
EciI GGCGGA 1 cut(s) 140
EclXI CGGCCG 1 cut(s) 42
Eco130I CCWWGG 6 cut(s) 69, 136, 385, 430, 1014, 1194
Eco24I GRGCYC 1 cut(s) 855
Eco31I GGTCTC 1 cut(s) 686
Eco32I GATATC 2 cut(s) 36, 1009
Eco47III AGCGCT 1 cut(s) 187
Eco52I CGGCCG 1 cut(s) 42
Eco57I CTGAAG 3 cut(s) 310, 767, 1475
Eco88I CYCGRG 1 cut(s) 176
EcoNI CCTNNNNNAGG 1 cut(s) 616
EcoO109I RGGNCCY 1 cut(s) 255
EcoRI GAATTC 1 cut(s) 1460
EcoRII CCWGG 2 cut(s) 257, 630
EcoRV GATATC 2 cut(s) 36, 1009
EcoT14I CCWWGG 6 cut(s) 69, 136, 385, 430, 1014, 1194
EcoT22I ATGCAT 1 cut(s) 649
EcoT38I GRGCYC 1 cut(s) 855
ErhI CCWWGG 6 cut(s) 69, 136, 385, 430, 1014, 1194
FaqI GGGAC 1 cut(s) 613
FblI GTMKAC 1 cut(s) 426
Fnu4HI GCNGC 4 cut(s) 77, 84, 154, 1476
FriOI GRGCYC 1 cut(s) 855
Fsp4HI GCNGC 4 cut(s) 77, 84, 154, 1476
FspBI CTAG 5 cut(s) 137, 246, 422, 971, 1569
GlaI GCGC 1 cut(s) 187
GluI GCNGC 4 cut(s) 77, 84, 154, 1476
GsuI CTGGAG 2 cut(s) 89, 675
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 6 cut(s) 44, 68, 83, 182, 257, 1193
HapII CCGG 3 cut(s) 41, 65, 87
HhaI GCGC 1 cut(s) 188
Hin6I GCGC 1 cut(s) 186
HinP1I GCGC 1 cut(s) 186
HincII GTYRAC 1 cut(s) 1117
HindII GTYRAC 1 cut(s) 1117
HindIII AAGCTT 2 cut(s) 1329, 1369
HinfI GANTC 4 cut(s) 47, 581, 640, 1044
HpaII CCGG 3 cut(s) 41, 65, 87
HphI GGTGA 6 cut(s) 30, 327, 442, 1358, 1376, 1501
Hpy166II GTNNAC 5 cut(s) 218, 427, 879, 1117, 1181
Hpy188I TCNGA 8 cut(s) 235, 441, 725, 786, 922, 1251, 1287, 1530
Hpy8I GTNNAC 5 cut(s) 218, 427, 879, 1117, 1181
HpyAV CCTTC 7 cut(s) 305, 836, 1140, 1232, 1410, 1415, 1450
HpyCH4III ACNGT 4 cut(s) 520, 1178, 1291, 1601
HpyCH4IV ACGT 2 cut(s) 905, 1392
HpyCH4V TGCA 9 cut(s) 31, 647, 716, 761, 839, 1106, 1216, 1265, 1475
HpyF10VI GCNNNNNNNGC 1 cut(s) 1271
HpySE526I ACGT 2 cut(s) 905, 1392
HspAI GCGC 1 cut(s) 186
KpnI GGTACC 1 cut(s) 60
Kzo9I GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
LmnI GCTCC 3 cut(s) 73, 362, 1402
Lsp1109I GCAGC 2 cut(s) 88, 1487
LweI GCATC 6 cut(s) 18, 105, 258, 586, 656, 729
MaeI CTAG 5 cut(s) 137, 246, 422, 971, 1569
MaeII ACGT 2 cut(s) 905, 1392
MaeIII GTNAC 5 cut(s) 370, 409, 514, 1032, 1379
MalI GATC 7 cut(s) 110, 510, 962, 1230, 1426, 1442, 1497
MboI GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
MboII GAAGA 8 cut(s) 92, 274, 283, 340, 658, 773, 1223, 1559
MhlI GDGCHC 2 cut(s) 493, 855
MluCI AATT 8 cut(s) 161, 207, 265, 606, 913, 1059, 1299, 1460
MlyI GAGTC 1 cut(s) 649
MmeI TCCRAC 2 cut(s) 747, 1021
Mph1103I ATGCAT 1 cut(s) 649
MroXI GAANNNNTTC 1 cut(s) 1460
MseI TTAA 3 cut(s) 206, 1089, 1298
MslI CAYNNNNRTG 4 cut(s) 551, 884, 1470, 1602
MspA1I CMGCKG 1 cut(s) 19
MspI CCGG 3 cut(s) 41, 65, 87
MspR9I CCNGG 2 cut(s) 259, 632
Mva1269I GAATGC 1 cut(s) 96
MvaI CCWGG 2 cut(s) 259, 632
MwoI GCNNNNNNNGC 1 cut(s) 1271
NcoI CCATGG 2 cut(s) 1014, 1194
NdeII GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
NlaIV GGNNCC 5 cut(s) 58, 364, 391, 1192, 1398
NmuCI GTSAC 4 cut(s) 370, 409, 514, 1032
NsiI ATGCAT 1 cut(s) 649
NspI RCATGY 2 cut(s) 835, 1040
OliI CACNNNNGTG 1 cut(s) 1470
PagI TCATGA 3 cut(s) 111, 891, 1225
PciI ACATGT 1 cut(s) 1036
PctI GAATGC 1 cut(s) 96
PdmI GAANNNNTTC 1 cut(s) 1460
PfeI GAWTC 3 cut(s) 47, 581, 1044
PflFI GACNNNGTC 2 cut(s) 625, 1245
PflMI CCANNNNNTGG 2 cut(s) 22, 1589
PkrI GCNGC 4 cut(s) 78, 85, 155, 1477
PleI GAGTC 1 cut(s) 648
PpsI GAGTC 1 cut(s) 648
Ppu21I YACGTR 2 cut(s) 906, 1393
PscI ACATGT 1 cut(s) 1036
PshAI GACNNNNGTC 1 cut(s) 698
PshBI ATTAAT 1 cut(s) 1298
Psp6I CCWGG 2 cut(s) 257, 630
PspGI CCWGG 2 cut(s) 257, 630
PspN4I GGNNCC 5 cut(s) 58, 364, 391, 1192, 1398
PspPI GGNCC 2 cut(s) 255, 1191
PstI CTGCAG 1 cut(s) 718
PstNI CAGNNNCTG 2 cut(s) 258, 518
PsyI GACNNNGTC 2 cut(s) 625, 1245
PvuII CAGCTG 1 cut(s) 19
RsaI GTAC 6 cut(s) 58, 617, 830, 1175, 1318, 1357
RsaNI GTAC 6 cut(s) 57, 616, 829, 1174, 1317, 1356
RseI CAYNNNNRTG 4 cut(s) 551, 884, 1470, 1602
SaqAI TTAA 3 cut(s) 206, 1089, 1298
SatI GCNGC 4 cut(s) 77, 84, 154, 1476
Sau3AI GATC 7 cut(s) 108, 508, 960, 1228, 1424, 1440, 1495
Sau96I GGNCC 2 cut(s) 255, 1191
SchI GAGTC 1 cut(s) 649
ScrFI CCNGG 2 cut(s) 259, 632
SduI GDGCHC 2 cut(s) 493, 855
SfaNI GCATC 6 cut(s) 18, 105, 258, 586, 656, 729
SfcI CTRYAG 2 cut(s) 454, 714
SmiMI CAYNNNNRTG 4 cut(s) 551, 884, 1470, 1602
SmlI CTYRAG 1 cut(s) 689
SmoI CTYRAG 1 cut(s) 689
Sse9I AATT 8 cut(s) 161, 207, 265, 606, 913, 1059, 1299, 1460
SsiI CCGC 4 cut(s) 84, 151, 154, 435
SspI AATATT 1 cut(s) 873
SspMI CTAG 5 cut(s) 137, 246, 422, 971, 1569
StyD4I CCNGG 2 cut(s) 257, 630
StyI CCWWGG 6 cut(s) 69, 136, 385, 430, 1014, 1194
TaaI ACNGT 4 cut(s) 520, 1178, 1291, 1601
TaiI ACGT 2 cut(s) 908, 1395
TaqI TCGA 3 cut(s) 1126, 1186, 1498
TaqII GACCGA 1 cut(s) 521
TasI AATT 8 cut(s) 161, 207, 265, 606, 913, 1059, 1299, 1460
TatI WGTACW 2 cut(s) 615, 1355
TauI GCSGC 2 cut(s) 86, 156
TfiI GAWTC 3 cut(s) 47, 581, 1044
Tru1I TTAA 3 cut(s) 206, 1089, 1298
Tru9I TTAA 3 cut(s) 206, 1089, 1298
TscAI CASTG 4 cut(s) 418, 523, 1183, 1267
TseFI GTSAC 4 cut(s) 370, 409, 514, 1032
TseI GCWGC 2 cut(s) 76, 1475
Tsp45I GTSAC 4 cut(s) 370, 409, 514, 1032
TspDTI ATGAA 8 cut(s) 569, 658, 908, 1036, 1214, 1463, 1470, 1554
TspRI CASTG 4 cut(s) 418, 523, 1183, 1267
Tth111I GACNNNGTC 2 cut(s) 625, 1245
Van91I CCANNNNNTGG 2 cut(s) 22, 1589
VspI ATTAAT 1 cut(s) 1298
XagI CCTNNNNNAGG 1 cut(s) 616
XapI RAATTY 3 cut(s) 161, 913, 1460
XceI RCATGY 2 cut(s) 835, 1040
XmaJI CCTAGG 1 cut(s) 136
XmiI GTMKAC 1 cut(s) 426
XmnI GAANNNNTTC 1 cut(s) 1460
XspI CTAG 5 cut(s) 137, 246, 422, 971, 1569
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.