RLG00000033524

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
28471610 .. 28472235
626 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033524

Sequence Viewer

Length: 528 bp
ATGGCGCCTGAATATGCACTATGGGGTTATTTAACATACAAAGCAGATGTATACAGTTTTGGTGTTGTCGCATTGGAAATTGTTGTTGGAAAGAACAACATGAAATTTCGAGCAGATGAGAACTTTGTAGGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATCTAATGGAGCTGGTGGATCCAAGGCTGGGGTCCAATTTCAGCAAGGAAGAGGCAATTAGAATGGTCAAAGTAGCTCTGCTATGCACCAACCCGGCACCAGCACTTAGGCCTACGATGTCTGCAGTAGTGGGTATGCTTGAAGGGAGGAGCGTTGTTCCTGAATTGATTATGGATCCAAGTATCTATGGTGATGAGACGAGGTTGACAGCCTTGAGGGACCGGTTTGAGAAGTTTGCAGCAGAAGACAGCTCATCAAGTGGAACTCAGAGCTTCTTGCGTGGATCAGATGCAACATCGATTGGTTGTTCGGCTACTGCTACATCTTCAGATCTCTACAAAGTTAGTCCTACTTCTTAG

Protein Analysis

176

Amino Acids

19.03

Weight (kDa)

4.92

Isoelectric Point (pI)

35.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 4, 265
AccI GTMKAC 1 cut(s) 51
AclWI GGATC 5 cut(s) 182, 195, 338, 351, 460
AcsI RAATTY 1 cut(s) 104
AcuI CTGAAG 1 cut(s) 480
AcyI GRCGYC 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 197
AgeI ACCGGT 1 cut(s) 390
AgsI TTSAA 1 cut(s) 311
AjuI GAANNNNNNNTTGG 2 cut(s) 69, 101
AluBI AGCT 4 cut(s) 181, 245, 420, 441
AluI AGCT 4 cut(s) 181, 245, 420, 441
Alw26I GTCTC 1 cut(s) 359
AlwI GGATC 5 cut(s) 182, 195, 338, 351, 460
AoxI GGCC 3 cut(s) 130, 144, 278
ApaI GGGCCC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 1 cut(s) 104
AsiGI ACCGGT 1 cut(s) 390
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 4 cut(s) 144, 145, 201, 388
AsuC2I CCSGG 1 cut(s) 263
AsuHPI GGTGA 1 cut(s) 371
AvaII GGWCC 2 cut(s) 201, 388
BaeGI GKGCMC 1 cut(s) 148
BamHI GGATCC 2 cut(s) 187, 343
BanI GGYRCC 2 cut(s) 4, 265
BanII GRGCYC 1 cut(s) 148
BbsI GAAGAC 1 cut(s) 420
BbvI GCAGC 1 cut(s) 419
BcnI CCSGG 1 cut(s) 263
BcoDI GTCTC 1 cut(s) 359
BfmI CTRYAG 1 cut(s) 291
BfoI RGCGCY 1 cut(s) 8
BglII AGATCT 1 cut(s) 499
BisI GCNGC 1 cut(s) 408
BlsI GCNGC 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 263
Bme18I GGWCC 2 cut(s) 201, 388
BmgT120I GGNCC 4 cut(s) 144, 145, 201, 388
BmiI GGNNCC 7 cut(s) 6, 146, 189, 202, 267, 345, 389
BmrFI CCNGG 1 cut(s) 263
BmsI GCATC 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 420
BpuEI CTTGAG 1 cut(s) 403
BpuMI CCSGG 1 cut(s) 263
Bsa29I ATCGAT 1 cut(s) 467
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 191
BsaWI WCCGGW 1 cut(s) 390
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse118I RCCGGY 1 cut(s) 390
BseCI ATCGAT 1 cut(s) 467
BseDI CCNNGG 1 cut(s) 191
BseLI CCNNNNNNNGG 1 cut(s) 197
BseMII CTCAG 1 cut(s) 449
BseRI GAGGAG 1 cut(s) 331
BseSI GKGCMC 1 cut(s) 148
BseXI GCAGC 1 cut(s) 419
BseYI CCCAGC 1 cut(s) 196
BshFI GGCC 3 cut(s) 132, 146, 280
BshNI GGYRCC 2 cut(s) 4, 265
BshTI ACCGGT 1 cut(s) 390
BshVI ATCGAT 1 cut(s) 467
BsiSI CCGG 2 cut(s) 263, 391
BslFI GGGAC 1 cut(s) 401
BslI CCNNNNNNNGG 1 cut(s) 197
BsmAI GTCTC 1 cut(s) 359
BsmBI CGTCTC 1 cut(s) 359
BsmFI GGGAC 1 cut(s) 401
BsnI GGCC 3 cut(s) 132, 146, 280
Bsp120I GGGCCC 1 cut(s) 144
Bsp1286I GDGCHC 1 cut(s) 148
Bsp143I GATC 4 cut(s) 187, 343, 452, 499
BspANI GGCC 3 cut(s) 132, 146, 280
BspCNI CTCAG 1 cut(s) 448
BspDI ATCGAT 1 cut(s) 467
BspLI GGNNCC 7 cut(s) 6, 146, 189, 202, 267, 345, 389
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 5 cut(s) 182, 195, 338, 351, 460
BspT107I GGYRCC 2 cut(s) 4, 265
BsrFI RCCGGY 1 cut(s) 390
BssAI RCCGGY 1 cut(s) 390
BssECI CCNNGG 1 cut(s) 191
BssMI GATC 4 cut(s) 187, 343, 452, 499
BssNAI GTATAC 1 cut(s) 52
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 191
Bst1107I GTATAC 1 cut(s) 52
Bst4CI ACNGT 1 cut(s) 56
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 1 cut(s) 5
BstDEI CTNAG 3 cut(s) 275, 435, 525
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 4 cut(s) 190, 346, 455, 502
BstMAI GTCTC 1 cut(s) 359
BstMBI GATC 4 cut(s) 187, 343, 452, 499
BstSCI CCNGG 1 cut(s) 261
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 1 cut(s) 148
BstV1I GCAGC 1 cut(s) 419
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 3 cut(s) 187, 343, 499
BstYI RGATCY 3 cut(s) 187, 343, 499
BstZ17I GTATAC 1 cut(s) 52
Bsu15I ATCGAT 1 cut(s) 467
BsuRI GGCC 3 cut(s) 132, 146, 280
BsuTUI ATCGAT 1 cut(s) 467
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 1 cut(s) 390
Cfr13I GGNCC 4 cut(s) 144, 145, 201, 388
ClaI ATCGAT 1 cut(s) 467
CspAI ACCGGT 1 cut(s) 390
CviAII CATG 1 cut(s) 100
DdeI CTNAG 3 cut(s) 275, 435, 525
DinI GGCGCC 1 cut(s) 6
DpnI GATC 4 cut(s) 189, 345, 454, 501
DpnII GATC 4 cut(s) 187, 343, 452, 499
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 191
Eco147I AGGCCT 2 cut(s) 132, 280
Eco24I GRGCYC 1 cut(s) 148
Eco47I GGWCC 2 cut(s) 201, 388
Eco57I CTGAAG 1 cut(s) 480
EcoO109I RGGNCCY 1 cut(s) 145
EcoT14I CCWWGG 1 cut(s) 191
EcoT38I GRGCYC 1 cut(s) 148
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 191
Esp3I CGTCTC 1 cut(s) 359
FaeI CATG 1 cut(s) 103
FaiI YATR 9 cut(s) 15, 22, 37, 52, 101, 253, 305, 341, 357
FaqI GGGAC 1 cut(s) 401
FatI CATG 1 cut(s) 99
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 1 cut(s) 408
FriOI GRGCYC 1 cut(s) 148
Fsp4HI GCNGC 1 cut(s) 408
GlaI GCGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 408
GsaI CCCAGC 1 cut(s) 200
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 132, 146, 280
HapII CCGG 2 cut(s) 263, 391
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 1 cut(s) 103
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 375
HindII GTYRAC 1 cut(s) 375
HinfI GANTC 1 cut(s) 169
HpaII CCGG 2 cut(s) 263, 391
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 2 cut(s) 52, 375
Hpy188I TCNGA 3 cut(s) 438, 457, 499
Hpy188III TCNNGA 1 cut(s) 329
Hpy8I GTNNAC 2 cut(s) 52, 375
HpyAV CCTTC 1 cut(s) 305
HpyCH4III ACNGT 1 cut(s) 56
HpyCH4V TGCA 5 cut(s) 17, 255, 293, 407, 461
HpyF3I CTNAG 3 cut(s) 275, 435, 525
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 1 cut(s) 103
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 4 cut(s) 187, 343, 452, 499
LmnI GCTCC 2 cut(s) 178, 318
LpnPI CCDG 7 cut(s) 21, 167, 182, 276, 282, 342, 404
Lsp1109I GCAGC 1 cut(s) 419
LweI GCATC 1 cut(s) 448
MalI GATC 4 cut(s) 189, 345, 454, 501
MboI GATC 4 cut(s) 187, 343, 452, 499
MboII GAAGA 3 cut(s) 230, 425, 486
MflI RGATCY 3 cut(s) 187, 343, 499
MhlI GDGCHC 1 cut(s) 148
MluCI AATT 5 cut(s) 78, 104, 205, 225, 332
Mly113I GGCGCC 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 67
MnlI CCTC 4 cut(s) 214, 309, 363, 378
MseI TTAA 1 cut(s) 32
MspI CCGG 2 cut(s) 263, 391
MspR9I CCNGG 1 cut(s) 263
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 263
NdeII GATC 4 cut(s) 187, 343, 452, 499
NlaIII CATG 1 cut(s) 103
NlaIV GGNNCC 7 cut(s) 6, 146, 189, 202, 267, 345, 389
PceI AGGCCT 2 cut(s) 132, 280
PfeI GAWTC 1 cut(s) 169
PinAI ACCGGT 1 cut(s) 390
PkrI GCNGC 1 cut(s) 409
PluTI GGCGCC 1 cut(s) 8
PspFI CCCAGC 1 cut(s) 196
PspN4I GGNNCC 7 cut(s) 6, 146, 189, 202, 267, 345, 389
PspOMI GGGCCC 1 cut(s) 144
PspPI GGNCC 4 cut(s) 144, 145, 201, 388
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 3 cut(s) 187, 343, 499
SaqAI TTAA 1 cut(s) 32
SatI GCNGC 1 cut(s) 408
Sau3AI GATC 4 cut(s) 187, 343, 452, 499
Sau96I GGNCC 4 cut(s) 144, 145, 201, 388
ScrFI CCNGG 1 cut(s) 263
SduI GDGCHC 1 cut(s) 148
SetI ASST 5 cut(s) 183, 247, 374, 422, 443
SfaNI GCATC 1 cut(s) 448
SfcI CTRYAG 1 cut(s) 291
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 201, 388
SmlI CTYRAG 1 cut(s) 382
SmoI CTYRAG 1 cut(s) 382
Sse9I AATT 5 cut(s) 78, 104, 205, 225, 332
SseBI AGGCCT 2 cut(s) 132, 280
SspDI GGCGCC 1 cut(s) 4
StuI AGGCCT 2 cut(s) 132, 280
StyD4I CCNGG 1 cut(s) 261
StyI CCWWGG 1 cut(s) 191
TaaI ACNGT 1 cut(s) 56
TaqI TCGA 2 cut(s) 109, 467
TasI AATT 5 cut(s) 78, 104, 205, 225, 332
TfiI GAWTC 1 cut(s) 169
Tru1I TTAA 1 cut(s) 32
Tru9I TTAA 1 cut(s) 32
TseI GCWGC 1 cut(s) 407
TspDTI ATGAA 1 cut(s) 116
VpaK11BI GGWCC 2 cut(s) 201, 388
XapI RAATTY 1 cut(s) 104
XmiI GTMKAC 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.