RLG00000031900

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
9328494 .. 9352267
23774 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031900

Sequence Viewer

Length: 795 bp
ATGGAGAACAATAGCCTTTCACACACTTTATTTGGTTCAGAGGAAGGCCTACGGAAATTGGACTGGCCTACAAGGCAGAAAATATGTGTTGGAATTGCGAAGGGTCTTGCTTTCCTGCATGATGGAACCTTGAAAATCGTTCATAGAGATATCAAAACAACCAACATATTGCTGGATAGGGACCTTAATGCTAAGATAGCTGACTTCGGTTTGGCTAAGCTTGACGAAGAGGAGCATACCCATATTAGCACCAGAGTTGCTGGAACTATAGGATACATGGCGCCAGAGTATGCTTTATGGGGCTATTTAACCGATAAGGCAGATGTATACAGTTTTGGAGTTGTAGCATTGGAACTGGTATCAGGGAAAAACAACATCAAATATCGGCCAAATGAAAATTTTGTATGCCTTCTAGATTGGGCCCTTGTTTTACAACAAAAAGGAAATCTAATGGAGCTGGTGGATCCAAAGTTGGGATCTGGGTTCAACAAGGAAGAGGCACTTAGAATGATAAAGGTAGCTCTACTATGCGCCAATTCATCACCGGCACTAAGACCCACGATGTCTGAAGTAGTGAGCATGCTTGAAGGCCAAACTTTCGTTCATGAAGTGACCATAAATCCAAGTATTTATGATGATGAAATGAGGTTTAAGGCCTTTACAGAGGACTCTGATCCGAATATGCAAGAGAGCTTTGAGGAGACTCGAAGCTTCATTCACTCCGATTCGAAACGGACAGCCTCTTCCTCATCGTCAGTCCTGAATCTTGATGCAGTTAAACCTGGGACCCGATAA

Protein Analysis

265

Amino Acids

29.47

Weight (kDa)

5.43

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 17 - 194 1.6e-25 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 24 - 193 2.1e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 280
AccI GTMKAC 1 cut(s) 327
AclWI GGATC 4 cut(s) 458, 471, 484, 668
AcoI YGGCCR 1 cut(s) 386
AcsI RAATTY 1 cut(s) 397
AcuI CTGAAG 1 cut(s) 588
AcyI GRCGYC 1 cut(s) 281
AfiI CCNNNNNNNGG 1 cut(s) 473
AgsI TTSAA 3 cut(s) 133, 487, 587
AjnI CCWGG 1 cut(s) 781
AjuI GAANNNNNNNTTGG 2 cut(s) 585, 617
AluBI AGCT 6 cut(s) 200, 220, 457, 521, 693, 711
AluI AGCT 6 cut(s) 200, 220, 457, 521, 693, 711
Alw26I GTCTC 1 cut(s) 695
AlwI GGATC 4 cut(s) 458, 471, 484, 668
AoxI GGCC 6 cut(s) 46, 65, 386, 420, 589, 654
ApaI GGGCCC 1 cut(s) 424
ApoI RAATTY 1 cut(s) 397
AspLEI GCGC 2 cut(s) 283, 533
AspS9I GGNCC 4 cut(s) 181, 420, 421, 786
AsuHPI GGTGA 1 cut(s) 534
AsuII TTCGAA 1 cut(s) 728
AvaII GGWCC 2 cut(s) 181, 786
BaeGI GKGCMC 1 cut(s) 424
BamHI GGATCC 1 cut(s) 463
BanI GGYRCC 1 cut(s) 280
BanII GRGCYC 1 cut(s) 424
BccI CCATC 1 cut(s) 116
BciT130I CCWGG 1 cut(s) 783
BciVI GTATCC 1 cut(s) 266
BcoDI GTCTC 1 cut(s) 695
BfaI CTAG 1 cut(s) 413
BfmI CTRYAG 1 cut(s) 267
BfoI RGCGCY 1 cut(s) 284
BfuI GTATCC 1 cut(s) 266
BglI GCCNNNNNGGC 1 cut(s) 73
BlpI GCTNAGC 1 cut(s) 216
Bme1390I CCNGG 1 cut(s) 783
Bme18I GGWCC 2 cut(s) 181, 786
BmgT120I GGNCC 4 cut(s) 181, 420, 421, 786
BmiI GGNNCC 7 cut(s) 127, 182, 282, 422, 465, 787, 788
BmrFI CCNGG 1 cut(s) 783
BmsI GCATC 1 cut(s) 760
Bpu1102I GCTNAGC 1 cut(s) 216
Bpu14I TTCGAA 1 cut(s) 728
BsaHI GRCGYC 1 cut(s) 281
BsaJI CCNNGG 1 cut(s) 782
Bsc4I CCNNNNNNNGG 1 cut(s) 473
Bse118I RCCGGY 1 cut(s) 544
Bse1I ACTGG 2 cut(s) 68, 360
BseBI CCWGG 1 cut(s) 783
BseDI CCNNGG 1 cut(s) 782
BseLI CCNNNNNNNGG 1 cut(s) 473
BseNI ACTGG 2 cut(s) 68, 360
BseRI GAGGAG 2 cut(s) 245, 713
BseSI GKGCMC 1 cut(s) 424
BshFI GGCC 6 cut(s) 48, 67, 388, 422, 591, 656
BshNI GGYRCC 1 cut(s) 280
BsiSI CCGG 1 cut(s) 545
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 1 cut(s) 473
BsmAI GTCTC 1 cut(s) 695
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 6 cut(s) 48, 67, 388, 422, 591, 656
Bsp119I TTCGAA 1 cut(s) 728
Bsp120I GGGCCC 1 cut(s) 420
Bsp1286I GDGCHC 1 cut(s) 424
Bsp143I GATC 3 cut(s) 463, 476, 673
Bsp1720I GCTNAGC 1 cut(s) 216
BspANI GGCC 6 cut(s) 48, 67, 388, 422, 591, 656
BspHI TCATGA 1 cut(s) 604
BspLI GGNNCC 7 cut(s) 127, 182, 282, 422, 465, 787, 788
BspPI GGATC 4 cut(s) 458, 471, 484, 668
BspT104I TTCGAA 1 cut(s) 728
BspT107I GGYRCC 1 cut(s) 280
BsrFI RCCGGY 1 cut(s) 544
BsrI ACTGG 2 cut(s) 68, 360
BssAI RCCGGY 1 cut(s) 544
BssECI CCNNGG 1 cut(s) 782
BssMI GATC 3 cut(s) 463, 476, 673
BssNAI GTATAC 1 cut(s) 328
BssNI GRCGYC 1 cut(s) 281
Bst1107I GTATAC 1 cut(s) 328
Bst2UI CCWGG 1 cut(s) 783
Bst4CI ACNGT 1 cut(s) 332
Bst6I CTCTTC 3 cut(s) 222, 489, 748
BstACI GRCGYC 1 cut(s) 281
BstBI TTCGAA 1 cut(s) 728
BstC8I GCNNGC 1 cut(s) 581
BstDEI CTNAG 4 cut(s) 192, 216, 503, 551
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 2 cut(s) 283, 533
BstKTI GATC 3 cut(s) 466, 479, 676
BstMAI GTCTC 1 cut(s) 695
BstMBI GATC 3 cut(s) 463, 476, 673
BstMWI GCNNNNNNNGC 2 cut(s) 73, 197
BstNI CCWGG 1 cut(s) 783
BstNSI RCATGY 1 cut(s) 583
BstSCI CCNGG 1 cut(s) 781
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 424
BstX2I RGATCY 2 cut(s) 463, 476
BstYI RGATCY 2 cut(s) 463, 476
BstZ17I GTATAC 1 cut(s) 328
BsuI GTATCC 1 cut(s) 266
BsuRI GGCC 6 cut(s) 48, 67, 388, 422, 591, 656
Cac8I GCNNGC 1 cut(s) 581
CciI TCATGA 1 cut(s) 604
CfoI GCGC 2 cut(s) 283, 533
Cfr10I RCCGGY 1 cut(s) 544
Cfr13I GGNCC 4 cut(s) 181, 420, 421, 786
CviAII CATG 4 cut(s) 119, 277, 580, 605
DdeI CTNAG 4 cut(s) 192, 216, 503, 551
DinI GGCGCC 1 cut(s) 282
DpnI GATC 3 cut(s) 465, 478, 675
DpnII GATC 3 cut(s) 463, 476, 673
EaeI YGGCCR 1 cut(s) 386
Eam1104I CTCTTC 3 cut(s) 222, 489, 748
EarI CTCTTC 3 cut(s) 222, 489, 748
Eco147I AGGCCT 2 cut(s) 48, 656
Eco24I GRGCYC 1 cut(s) 424
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 181, 786
Eco57I CTGAAG 1 cut(s) 588
EcoO109I RGGNCCY 3 cut(s) 181, 421, 786
EcoRII CCWGG 1 cut(s) 781
EcoRV GATATC 1 cut(s) 151
EcoT38I GRGCYC 1 cut(s) 424
EgeI GGCGCC 1 cut(s) 282
EheI GGCGCC 1 cut(s) 282
FaeI CATG 4 cut(s) 122, 280, 583, 608
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 1 cut(s) 194
FatI CATG 4 cut(s) 118, 276, 579, 604
FblI GTMKAC 1 cut(s) 327
FriOI GRGCYC 1 cut(s) 424
FspBI CTAG 1 cut(s) 413
GlaI GCGC 2 cut(s) 282, 532
HaeII RGCGCY 1 cut(s) 284
HaeIII GGCC 6 cut(s) 48, 67, 388, 422, 591, 656
HapII CCGG 1 cut(s) 545
HhaI GCGC 2 cut(s) 283, 533
Hin1I GRCGYC 1 cut(s) 281
Hin1II CATG 4 cut(s) 122, 280, 583, 608
Hin6I GCGC 2 cut(s) 281, 531
HinP1I GCGC 2 cut(s) 281, 531
HindIII AAGCTT 2 cut(s) 218, 709
HinfI GANTC 4 cut(s) 668, 703, 725, 763
HpaII CCGG 1 cut(s) 545
HphI GGTGA 1 cut(s) 534
Hpy166II GTNNAC 1 cut(s) 328
Hpy188I TCNGA 5 cut(s) 40, 568, 673, 678, 724
Hpy188III TCNNGA 4 cut(s) 413, 605, 760, 767
Hpy8I GTNNAC 1 cut(s) 328
HpyAV CCTTC 4 cut(s) 38, 94, 419, 581
HpyCH4III ACNGT 1 cut(s) 332
HpyCH4V TGCA 3 cut(s) 118, 685, 773
HpyF10VI GCNNNNNNNGC 2 cut(s) 73, 197
HpyF3I CTNAG 4 cut(s) 192, 216, 503, 551
Hsp92I GRCGYC 1 cut(s) 281
Hsp92II CATG 4 cut(s) 122, 280, 583, 608
HspAI GCGC 2 cut(s) 281, 531
KasI GGCGCC 1 cut(s) 280
KflI GGGWCCC 1 cut(s) 786
Kzo9I GATC 3 cut(s) 463, 476, 673
LmnI GCTCC 2 cut(s) 232, 454
LweI GCATC 1 cut(s) 760
MaeI CTAG 1 cut(s) 413
MaeIII GTNAC 1 cut(s) 610
MalI GATC 3 cut(s) 465, 478, 675
MboI GATC 3 cut(s) 463, 476, 673
MboII GAAGA 3 cut(s) 239, 506, 735
MflI RGATCY 2 cut(s) 463, 476
MhlI GDGCHC 1 cut(s) 424
MluCI AATT 4 cut(s) 56, 93, 397, 535
Mly113I GGCGCC 1 cut(s) 281
MlyI GAGTC 2 cut(s) 662, 697
MmeI TCCRAC 1 cut(s) 70
MnlI CCTC 8 cut(s) 34, 223, 490, 639, 658, 691, 751, 757
MseI TTAA 4 cut(s) 186, 308, 651, 777
MspI CCGG 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 783
MvaI CCWGG 1 cut(s) 783
MwoI GCNNNNNNNGC 2 cut(s) 73, 197
NarI GGCGCC 1 cut(s) 281
NdeII GATC 3 cut(s) 463, 476, 673
NlaIII CATG 4 cut(s) 122, 280, 583, 608
NlaIV GGNNCC 7 cut(s) 127, 182, 282, 422, 465, 787, 788
NmuCI GTSAC 1 cut(s) 610
NspI RCATGY 1 cut(s) 583
NspV TTCGAA 1 cut(s) 728
PaeI GCATGC 1 cut(s) 583
PagI TCATGA 1 cut(s) 604
PceI AGGCCT 2 cut(s) 48, 656
PfeI GAWTC 2 cut(s) 725, 763
PleI GAGTC 2 cut(s) 662, 697
PluTI GGCGCC 1 cut(s) 284
PpsI GAGTC 2 cut(s) 662, 697
PpuMI RGGWCCY 2 cut(s) 181, 786
Psp5II RGGWCCY 2 cut(s) 181, 786
Psp6I CCWGG 1 cut(s) 781
PspGI CCWGG 1 cut(s) 781
PspN4I GGNNCC 7 cut(s) 127, 182, 282, 422, 465, 787, 788
PspOMI GGGCCC 1 cut(s) 420
PspPI GGNCC 4 cut(s) 181, 420, 421, 786
PspPPI RGGWCCY 2 cut(s) 181, 786
PsuI RGATCY 2 cut(s) 463, 476
SaqAI TTAA 4 cut(s) 186, 308, 651, 777
Sau3AI GATC 3 cut(s) 463, 476, 673
Sau96I GGNCC 4 cut(s) 181, 420, 421, 786
SchI GAGTC 2 cut(s) 662, 697
ScrFI CCNGG 1 cut(s) 783
SduI GDGCHC 1 cut(s) 424
SfaNI GCATC 1 cut(s) 760
SfcI CTRYAG 1 cut(s) 267
SfoI GGCGCC 1 cut(s) 282
SfuI TTCGAA 1 cut(s) 728
SinI GGWCC 2 cut(s) 181, 786
SphI GCATGC 1 cut(s) 583
Sse9I AATT 4 cut(s) 56, 93, 397, 535
SseBI AGGCCT 2 cut(s) 48, 656
SspDI GGCGCC 1 cut(s) 280
SspMI CTAG 1 cut(s) 413
StuI AGGCCT 2 cut(s) 48, 656
StyD4I CCNGG 1 cut(s) 781
TaaI ACNGT 1 cut(s) 332
TaqI TCGA 2 cut(s) 706, 728
TasI AATT 4 cut(s) 56, 93, 397, 535
TfiI GAWTC 2 cut(s) 725, 763
Tru1I TTAA 4 cut(s) 186, 308, 651, 777
Tru9I TTAA 4 cut(s) 186, 308, 651, 777
TseFI GTSAC 1 cut(s) 610
Tsp45I GTSAC 1 cut(s) 610
TspDTI ATGAA 7 cut(s) 131, 408, 528, 593, 621, 654, 703
TspGWI ACGGA 2 cut(s) 67, 748
VpaK11BI GGWCC 2 cut(s) 181, 786
XapI RAATTY 1 cut(s) 397
XbaI TCTAGA 1 cut(s) 412
XceI RCATGY 1 cut(s) 583
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XmiI GTMKAC 1 cut(s) 327
XspI CTAG 1 cut(s) 413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.