Rw5G008170

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8737966 .. 8745968
8003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008170.1

Sequence Viewer

Length: 3144 bp
ATGGTGGTCTATTCGTGGTCTATGGAAGCACTAAAAGAAATTGGTAAGGAATTGGGGAAAAGGGACTGGAACTTTGAAGAAGACCCATGTAGCAATAAGTCAAGTTGGGCCAGCCCATTCGACACAAAGTCTGAGGATTGGCCTTCATCCATGAACAATGTCACTTGCAGCTGCTCCTTCCCTGATGAAACATACCACGTTATCAGCATAATTCTTCAAGGACAAGATTTACCTGGTGTACTTCCACCATCTATTGCGAGGTTACCCTACCTGACAACACTTGATTTGAATAGGAACTACCTCACTGGTGAGATACCGCGTCAATGGGCTTCTACAAAGCTGGAACATCTGTCTGTTTCGGTGAACAATTTACTGGCTGGATCAATCCCTAGCTACTTAGGAAACATTACCACTCTACAGTATCTGAGCCTAGAGACTAACCGGTTTTCTGGAACTGTTCCTTCTGAGCTTGGTAATTTGGTTAACTTAACGACTCTCGTTCTTAGCGCAAACAATCTCACCGGAGAGTTGCCGATGGCTTTGACTAATCTGACTAAATTGATTGAACTAAGGATAAGCAGTAACAGCTTTACTGGAAGTATAGCTCCCGAGTTTTTTCAAAGCTGGAATCAACTACAGGAATTAGAGATCCAAGCTAGTGGTCTAGAAGGGCCCATTCCATCTAGCATTTCTATGTTGAAAAAATTAACAGAGCTAAGGATCAGTGACTTAAATGGAAAGGGATCAGAATTTCCACCCTTGAATGAAACAACTGGTTTGAAAAGATTAATGCTGAGGAGCTGTAATTTATCCGGACGTATTCCTAATTACACATCGGCAGTGGAGTCATTGAATATGTTGGATCTCAGCTTCAACAGATTGGTTGGAAGTATTCCTGAATTTAAAAGAGTACAGTACTTGTATTTGACAAACAACTTGCTCACTGGGCCTATTCCAGACTGGATCAATAGCAGAGATTCACGCTACTTAGCAGATATTTCTTACAATAATTTTTCTGAGAGCTCTGCACAGCTACCGTCTTGTACAGGAACCCCGAACTCCTTTAAAAGTTTTACTGCACGAGACAACTTATTATCAGAAGAGTGTCTGAAGAAATATCCTTGTGGCAAAGATCACTACTCATTGCATATAAATTGTGGTGGAGAAGCAACCACTATTAGAGGAACCAAATTTGAAGAGGATGCAGACCCAGGAAGTCCAGCAAAATTCTTCTCTGTGAATATCTGGGGGTTCAGTAGCACTGGACAGTTCTGGGATAAGAACCCTACAGCTCAAGATTACATAACAAAGAATGTATCTTTACTCACAATGGAGAACTCTGAGTTGTACACAAATGCACGCCTGTCTCCTCTCTCTCTTACATATTATGCACGCTGCCTTGGGAACGGAATCTATAATGTGAAGCTTCACTTTGCAGAGATAATAATCAGAGGCAATGCATCTTTTTACAGTCTTGGGAGGCGGGTATTTGATGTTTATATTCAGGAGCAACTGGTGCTCAAGGAGTTTGACATTGCAAAGGAAGCACAAGGGACTGATAAGGAGGTCATTAAGAAATTCAAAGCAGTTGTTAAGAATAAAACACTAGAGATCCGATTTCATTGGTCAGGGAAAGGGACAACAGGTTCCCCACATAAAGGAACATATGGTCCCCTTATATCAGCTATCTCAATAAATTCTGACTTCAGGCCTCCTTTTGGTAGAGAAACAAAGGCACTTATTGTGGTTGGAGCTTCAGTTTTGTGCCTTGCTTTATTGATTTTAGGCATTCTTTGGTGGCAAGGCTGTCTGAACATCAAGACATTAAGGGAAAGAGCTCTGAGAGGACTCGACCTGCAAACTGGCTTTTTCACCTTCAAGCAAATCAAAGCTGCCACTAACAACTTTGATCCAACAAACAAAATTGGAGAAGGTGGTTTTGGGCCTGTCTACAAGGGTATATTAAGTGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCAAAGCAGGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTTGTTTGCAGCACCCAAATCTGGTTAGATTGTATGGTTGTTGTATTGAAGCAAACCAATTACTGTTGGTATATGAGTACATGGAAAACAATAGCCTTGCACGCGCTTTGTTCGGTCCAGAGGATGGTCCCCTAAAATTAAACTGGCCTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCATGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATGTGTTATTGGACCAAGACCTCAATGCAAAGATATCGGACTTCGGTTTGGCCAAGCTTGATGAAGAAGAGAAAAGTCACATAAGCACCAGGATTGCTGGAACTATAGGATACATGGCGCCAGAATATGCCCTGTGGGGTTGTTTGACCTATAAAGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACATGAAATATCGACCCAATGAAAATATTCAATGTCTTATGGATTGGGCCCTTGTTTTGCAACAAAAAGGGAGCTTACTGGAGCTGGTGGATCCGAGGTTGGGGTCCGATTTCAGTAAGAAAGAGGCGATTAGAACAATCAAAGTAGCTCTATTATGCGCCAATCCAACAGCTGCACTTAGGCCTAACATGTCTGAAGTAGTGAGTATGCTTGAAGGGCGGACCCCCGTGGATGCAGTGGTTCTGGATCCAAGCATCCATGGTGATGAAATGACGAGGTTAAGAGCCTTTGAAGACCAGTTTGATCACATTACTGCACAAGGGAGCTCCCCAAGTGGAAGTCATAGCCTCATGCGTTCATTAGATGGACCATGGACCGGTTCTTCAGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTACCCGCTGCCCTGCAGCCCCGCGCCCGTGCCCGTGCCCCTGCAGCGTTCCTGCAACTTTGCCGCAAGTCTACTGCCCCTAGCGTTTGTGATCTTCGGACTAAGAGCGTTCGTGATCTTCGGACTAAGAGCGTTCGTGAGCATCGATTTTTACGAACTAAGAGCGTTCGTAGGCTACGGACTAAGAGCGTTCGTAAACATAAAAATTTGA

Protein Analysis

1047

Amino Acids

116.09

Weight (kDa)

7.16

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 131 - 327 7.1e-13 Leucine-rich repeat region
Malectin PF11721 381 - 563 1.9e-35 Malectin domain
Pkinase PF00069 639 - 845 6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 640 - 845 3.1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1863
AccB1I GGYRCC 1 cut(s) 2416
AccB7I CCANNNNNTGG 1 cut(s) 2177
AccI GTMKAC 3 cut(s) 1950, 2463, 3004
AccII CGCG 3 cut(s) 319, 2157, 2957
AccIII TCCGGA 1 cut(s) 812
AciI CCGC 6 cut(s) 317, 1483, 2728, 2939, 2955, 2997
AcoI YGGCCR 1 cut(s) 2349
AcsI RAATTY 8 cut(s) 749, 899, 1190, 1226, 1577, 1696, 2027, 3138
AcuI CTGAAG 6 cut(s) 1130, 1690, 1740, 2724, 2877, 2895
AcyI GRCGYC 1 cut(s) 2417
AfaI GTAC 8 cut(s) 240, 912, 917, 1045, 1349, 1975, 2132, 2277
AfiI CCNNNNNNNGG 6 cut(s) 1658, 1718, 2074, 2177, 2609, 2885
AflIII ACRYGT 1 cut(s) 2697
AgeI ACCGGT 2 cut(s) 441, 2885
AhdI GACNNNNNGTC 1 cut(s) 127
AjnI CCWGG 3 cut(s) 232, 1210, 2387
AjuI GAANNNNNNNTTGG 4 cut(s) 1923, 1955, 2291, 2323
AloI GAACNNNNNNTCC 4 cut(s) 1630, 1654, 1662, 1686
Alw21I GWGCWC 4 cut(s) 1025, 1521, 1840, 2837
Alw26I GTCTC 4 cut(s) 428, 1077, 1371, 2277
AlwNI CAGNNNCTG 1 cut(s) 424
Ama87I CYCGRG 1 cut(s) 608
Aor13HI TCCGGA 1 cut(s) 812
ApaI GGGCCC 2 cut(s) 675, 2560
ApeKI GCWGC 9 cut(s) 168, 171, 1395, 1892, 2062, 2681, 2941, 2949, 2977
ApoI RAATTY 8 cut(s) 749, 899, 1190, 1226, 1577, 1696, 2027, 3138
ArsI GACNNNNNNTTYG 2 cut(s) 56, 88
AseI ATTAAT 1 cut(s) 788
AsiGI ACCGGT 2 cut(s) 441, 2885
Asp700I GAANNNNTTC 1 cut(s) 2535
AspA2I CCTAGG 1 cut(s) 2221
AspLEI GCGC 5 cut(s) 509, 2159, 2419, 2669, 2959
AsuHPI GGTGA 5 cut(s) 320, 373, 511, 1864, 2783
AvaI CYCGRG 1 cut(s) 608
AvaII GGWCC 8 cut(s) 1670, 2168, 2180, 2311, 2613, 2730, 2876, 2883
AvrII CCTAGG 1 cut(s) 2221
BaeGI GKGCMC 4 cut(s) 675, 2560, 2967, 2973
BalI TGGCCA 1 cut(s) 2351
BamHI GGATCC 2 cut(s) 2599, 2755
BanI GGYRCC 1 cut(s) 2416
BanII GRGCYC 5 cut(s) 675, 1025, 1840, 2560, 2837
BauI CACGAG 1 cut(s) 1080
BbsI GAAGAC 3 cut(s) 87, 2808, 2901
Bbv12I GWGCWC 4 cut(s) 1025, 1521, 1840, 2837
BbvCI CCTCAGC 1 cut(s) 794
BbvI GCAGC 9 cut(s) 158, 180, 1382, 1879, 2074, 2668, 2928, 2961, 2989
BccI CCATC 6 cut(s) 256, 529, 688, 1964, 2171, 2867
BcgI CGANNNNNNTGC 4 cut(s) 2003, 2037, 2316, 2350
BciT130I CCWGG 3 cut(s) 234, 1212, 2389
BciVI GTATCC 1 cut(s) 2402
BclI TGATCA 1 cut(s) 2812
BcoDI GTCTC 4 cut(s) 428, 1077, 1371, 2277
BfaI CTAG 8 cut(s) 390, 431, 657, 665, 684, 1607, 2222, 3014
BfmI CTRYAG 7 cut(s) 416, 635, 1287, 2403, 2464, 2947, 2975
BfoI RGCGCY 1 cut(s) 2420
BfuAI ACCTGC 1 cut(s) 1863
BfuI GTATCC 1 cut(s) 2402
BglI GCCNNNNNGGC 1 cut(s) 2206
BglII AGATCT 1 cut(s) 2914
BlnI CCTAGG 1 cut(s) 2221
BmcAI AGTACT 1 cut(s) 917
Bme1390I CCNGG 3 cut(s) 234, 1212, 2389
Bme18I GGWCC 8 cut(s) 1670, 2168, 2180, 2311, 2613, 2730, 2876, 2883
BmeRI GACNNNNNGTC 1 cut(s) 127
BmeT110I CYCGRG 1 cut(s) 608
BmrFI CCNGG 3 cut(s) 234, 1212, 2389
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 5 cut(s) 1192, 1469, 2731, 2772, 3084
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 3 cut(s) 87, 2808, 2901
BpmI CTGGAG 1 cut(s) 2609
Bpu10I CCTNAGC 2 cut(s) 716, 794
BpuEI CTTGAG 2 cut(s) 1278, 1505
Bsa29I ATCGAT 1 cut(s) 3078
BsaBI GATNNNNATC 1 cut(s) 1445
BsaHI GRCGYC 1 cut(s) 2417
BsaJI CCNNGG 7 cut(s) 1210, 1399, 2221, 2603, 2736, 2767, 2879
BsaWI WCCGGW 4 cut(s) 441, 521, 812, 2885
BsaXI ACNNNNNCTCC 2 cut(s) 1743, 1773
Bsc4I CCNNNNNNNGG 6 cut(s) 1658, 1718, 2074, 2177, 2609, 2885
Bse118I RCCGGY 2 cut(s) 441, 2885
Bse3DI GCAATG 3 cut(s) 1142, 1462, 1533
Bse8I GATNNNNATC 1 cut(s) 1445
BseAI TCCGGA 1 cut(s) 812
BseBI CCWGG 3 cut(s) 234, 1212, 2389
BseCI ATCGAT 1 cut(s) 3078
BseDI CCNNGG 7 cut(s) 1210, 1399, 2221, 2603, 2736, 2767, 2879
BseGI GGATG 5 cut(s) 146, 1207, 2182, 2746, 2763
BseJI GATNNNNATC 1 cut(s) 1445
BseLI CCNNNNNNNGG 6 cut(s) 1658, 1718, 2074, 2177, 2609, 2885
BseMI GCAATG 3 cut(s) 1142, 1462, 1533
BseMII CTCAG 8 cut(s) 123, 416, 456, 785, 880, 1008, 1332, 1832
BseRI GAGGAG 2 cut(s) 811, 1359
BseSI GKGCMC 4 cut(s) 675, 2560, 2967, 2973
BseXI GCAGC 9 cut(s) 158, 180, 1382, 1879, 2074, 2668, 2928, 2961, 2989
BsgI GTGCAG 4 cut(s) 1011, 1062, 2667, 2808
Bsh1236I CGCG 3 cut(s) 319, 2157, 2957
BshNI GGYRCC 1 cut(s) 2416
BshTI ACCGGT 2 cut(s) 441, 2885
BshVI ATCGAT 1 cut(s) 3078
BsiHKAI GWGCWC 4 cut(s) 1025, 1521, 1840, 2837
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 4 cut(s) 442, 522, 813, 2886
BslFI GGGAC 5 cut(s) 77, 1567, 1651, 1656, 2166
BslI CCNNNNNNNGG 6 cut(s) 1658, 1718, 2074, 2177, 2609, 2885
BsmAI GTCTC 4 cut(s) 428, 1077, 1371, 2277
BsmFI GGGAC 5 cut(s) 77, 1567, 1651, 1656, 2166
BsmI GAATGC 1 cut(s) 1788
BsoBI CYCGRG 1 cut(s) 608
Bsp120I GGGCCC 2 cut(s) 671, 2556
Bsp1286I GDGCHC 8 cut(s) 675, 1025, 1521, 1840, 2560, 2837, 2967, 2973
Bsp13I TCCGGA 1 cut(s) 812
Bsp1407I TGTACA 3 cut(s) 1043, 1347, 2275
Bsp19I CCATGG 2 cut(s) 2767, 2879
BspACI CCGC 6 cut(s) 317, 1483, 2728, 2939, 2955, 2997
BspCNI CTCAG 8 cut(s) 124, 417, 457, 786, 879, 1009, 1333, 1833
BspDI ATCGAT 1 cut(s) 3078
BspEI TCCGGA 1 cut(s) 812
BspFNI CGCG 3 cut(s) 319, 2157, 2957
BspMAI CTGCAG 2 cut(s) 2951, 2979
BspMI ACCTGC 1 cut(s) 1863
BspT107I GGYRCC 1 cut(s) 2416
BsrDI GCAATG 3 cut(s) 1142, 1462, 1533
BsrFI RCCGGY 2 cut(s) 441, 2885
BsrGI TGTACA 3 cut(s) 1043, 1347, 2275
BssAI RCCGGY 2 cut(s) 441, 2885
BssECI CCNNGG 7 cut(s) 1210, 1399, 2221, 2603, 2736, 2767, 2879
BssNI GRCGYC 1 cut(s) 2417
BssSI CACGAG 1 cut(s) 1080
BssT1I CCWWGG 4 cut(s) 1399, 2221, 2767, 2879
Bst2BI CACGAG 1 cut(s) 1080
Bst2UI CCWGG 3 cut(s) 234, 1212, 2389
Bst4CI ACNGT 9 cut(s) 420, 457, 915, 1038, 1269, 1472, 2118, 2468, 2494
Bst6I CTCTTC 3 cut(s) 1095, 1191, 2361
BstACI GRCGYC 1 cut(s) 2417
BstAPI GCANNNNNTGC 1 cut(s) 1516
BstAUI TGTACA 3 cut(s) 1043, 1347, 2275
BstC8I GCNNGC 4 cut(s) 112, 1360, 1393, 2155
BstDSI CCRYGG 3 cut(s) 2736, 2767, 2879
BstEII GGTNACC 1 cut(s) 261
BstF5I GGATG 5 cut(s) 146, 1207, 2182, 2746, 2763
BstFNI CGCG 3 cut(s) 319, 2157, 2957
BstH2I RGCGCY 1 cut(s) 2420
BstHHI GCGC 5 cut(s) 509, 2159, 2419, 2669, 2959
BstMAI GTCTC 4 cut(s) 428, 1077, 1371, 2277
BstMWI GCNNNNNNNGC 8 cut(s) 585, 946, 1516, 1544, 2154, 2206, 2725, 2977
BstNI CCWGG 3 cut(s) 234, 1212, 2389
BstNSI RCATGY 1 cut(s) 2701
BstPI GGTNACC 1 cut(s) 261
BstSCI CCNGG 3 cut(s) 232, 1210, 2387
BstSFI CTRYAG 7 cut(s) 416, 635, 1287, 2403, 2464, 2947, 2975
BstSLI GKGCMC 4 cut(s) 675, 2560, 2967, 2973
BstUI CGCG 3 cut(s) 319, 2157, 2957
BstV1I GCAGC 9 cut(s) 158, 180, 1382, 1879, 2074, 2668, 2928, 2961, 2989
BstV2I GAAGAC 3 cut(s) 87, 2808, 2901
BstX2I RGATCY 6 cut(s) 648, 862, 1611, 2599, 2755, 2914
BstXI CCANNNNNNTGG 1 cut(s) 659
BstYI RGATCY 6 cut(s) 648, 862, 1611, 2599, 2755, 2914
Bsu15I ATCGAT 1 cut(s) 3078
BsuI GTATCC 1 cut(s) 2402
BsuTUI ATCGAT 1 cut(s) 3078
BtgI CCRYGG 3 cut(s) 2736, 2767, 2879
BtsCI GGATG 5 cut(s) 146, 1207, 2182, 2746, 2763
BtsI GCAGTG 3 cut(s) 846, 2271, 2751
BtsIMutI CAGTG 7 cut(s) 303, 730, 846, 942, 1260, 2271, 2751
BveI ACCTGC 1 cut(s) 1863
Cac8I GCNNGC 4 cut(s) 112, 1360, 1393, 2155
CaiI CAGNNNCTG 1 cut(s) 424
CfoI GCGC 5 cut(s) 509, 2159, 2419, 2669, 2959
Cfr10I RCCGGY 2 cut(s) 441, 2885
ClaI ATCGAT 1 cut(s) 3078
CseI GACGC 1 cut(s) 308
CsiI ACCWGGT 1 cut(s) 232
Csp6I GTAC 8 cut(s) 239, 911, 916, 1044, 1348, 1974, 2131, 2276
CspAI ACCGGT 2 cut(s) 441, 2885
CviQI GTAC 8 cut(s) 239, 911, 916, 1044, 1348, 1974, 2131, 2276
DinI GGCGCC 1 cut(s) 2418
DraI TTTAAA 2 cut(s) 904, 1066
DriI GACNNNNNGTC 1 cut(s) 127
EaeI YGGCCR 1 cut(s) 2349
Eam1104I CTCTTC 3 cut(s) 1095, 1191, 2361
Eam1105I GACNNNNNGTC 1 cut(s) 127
EarI CTCTTC 3 cut(s) 1095, 1191, 2361
EciI GGCGGA 1 cut(s) 2743
Ecl136II GAGCTC 3 cut(s) 1023, 1838, 2835
Eco130I CCWWGG 4 cut(s) 1399, 2221, 2767, 2879
Eco147I AGGCCT 2 cut(s) 1711, 2692
Eco24I GRGCYC 5 cut(s) 675, 1025, 1840, 2560, 2837
Eco32I GATATC 1 cut(s) 2334
Eco47I GGWCC 8 cut(s) 1670, 2168, 2180, 2311, 2613, 2730, 2876, 2883
Eco53kI GAGCTC 3 cut(s) 1023, 1838, 2835
Eco57I CTGAAG 6 cut(s) 1130, 1690, 1740, 2724, 2877, 2895
Eco88I CYCGRG 1 cut(s) 608
Eco91I GGTNACC 1 cut(s) 261
EcoICRI GAGCTC 3 cut(s) 1023, 1838, 2835
EcoO109I RGGNCCY 2 cut(s) 671, 2557
EcoO65I GGTNACC 1 cut(s) 261
EcoRII CCWGG 3 cut(s) 232, 1210, 2387
EcoRV GATATC 1 cut(s) 2334
EcoT14I CCWWGG 4 cut(s) 1399, 2221, 2767, 2879
EcoT22I ATGCAT 1 cut(s) 1462
EcoT38I GRGCYC 5 cut(s) 675, 1025, 1840, 2560, 2837
EgeI GGCGCC 1 cut(s) 2418
EheI GGCGCC 1 cut(s) 2418
ErhI CCWWGG 4 cut(s) 1399, 2221, 2767, 2879
FalI AAGNNNNNCTT 2 cut(s) 1415, 1447
FaqI GGGAC 5 cut(s) 77, 1567, 1651, 1656, 2166
FauI CCCGC 3 cut(s) 1476, 2946, 2962
FauNDI CATATG 1 cut(s) 1666
FbaI TGATCA 1 cut(s) 2812
FblI GTMKAC 3 cut(s) 1950, 2463, 3004
FokI GGATG 5 cut(s) 133, 1214, 2189, 2750, 2753
FriOI GRGCYC 5 cut(s) 675, 1025, 1840, 2560, 2837
FspBI CTAG 8 cut(s) 390, 431, 657, 665, 684, 1607, 2222, 3014
GlaI GCGC 5 cut(s) 508, 2158, 2418, 2668, 2958
GsuI CTGGAG 1 cut(s) 2609
HaeII RGCGCY 1 cut(s) 2420
HapII CCGG 4 cut(s) 442, 522, 813, 2886
HgaI GACGC 1 cut(s) 308
HhaI GCGC 5 cut(s) 509, 2159, 2419, 2669, 2959
Hin1I GRCGYC 1 cut(s) 2417
Hin6I GCGC 5 cut(s) 507, 2157, 2417, 2667, 2957
HinP1I GCGC 5 cut(s) 507, 2157, 2417, 2667, 2957
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HindIII AAGCTT 2 cut(s) 1424, 2354
HinfI GANTC 7 cut(s) 493, 628, 845, 977, 1410, 1848, 2258
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 4 cut(s) 442, 522, 813, 2886
HphI GGTGA 5 cut(s) 320, 373, 511, 1864, 2783
Hpy166II GTNNAC 9 cut(s) 239, 364, 484, 1350, 1951, 2035, 2464, 3005, 3130
Hpy8I GTNNAC 9 cut(s) 239, 364, 484, 1350, 1951, 2035, 2464, 3005, 3130
HpyAV CCTTC 8 cut(s) 153, 187, 471, 662, 1885, 1925, 2263, 2717
HpyCH4III ACNGT 9 cut(s) 420, 457, 915, 1038, 1269, 1472, 2118, 2468, 2494
HpyCH4IV ACGT 3 cut(s) 198, 817, 2906
HpyF10VI GCNNNNNNNGC 8 cut(s) 585, 946, 1516, 1544, 2154, 2206, 2725, 2977
HpySE526I ACGT 3 cut(s) 198, 817, 2906
Hsp92I GRCGYC 1 cut(s) 2417
HspAI GCGC 5 cut(s) 507, 2157, 2417, 2667, 2957
KasI GGCGCC 1 cut(s) 2416
Kpn2I TCCGGA 1 cut(s) 812
Ksp22I TGATCA 1 cut(s) 2812
KspAI GTTAAC 1 cut(s) 484
LmnI GCTCC 9 cut(s) 179, 610, 798, 1507, 1751, 2580, 2590, 2832, 2840
Lsp1109I GCAGC 9 cut(s) 158, 180, 1382, 1879, 2074, 2668, 2928, 2961, 2989
LweI GCATC 5 cut(s) 1192, 1469, 2731, 2772, 3084
MabI ACCWGGT 1 cut(s) 232
MaeI CTAG 8 cut(s) 390, 431, 657, 665, 684, 1607, 2222, 3014
MaeII ACGT 3 cut(s) 198, 817, 2906
MaeIII GTNAC 6 cut(s) 160, 261, 581, 725, 2375, 2896
MflI RGATCY 6 cut(s) 648, 862, 1611, 2599, 2755, 2914
MhlI GDGCHC 8 cut(s) 675, 1025, 1521, 1840, 2560, 2837, 2967, 2973
MlsI TGGCCA 1 cut(s) 2351
MluNI TGGCCA 1 cut(s) 2351
Mly113I GGCGCC 1 cut(s) 2417
MlyI GAGTC 3 cut(s) 487, 854, 1842
MmeI TCCRAC 5 cut(s) 840, 865, 1729, 1937, 2699
Mox20I TGGCCA 1 cut(s) 2351
Mph1103I ATGCAT 1 cut(s) 1462
MroI TCCGGA 1 cut(s) 812
MroXI GAANNNNTTC 1 cut(s) 2535
MscI TGGCCA 1 cut(s) 2351
MslI CAYNNNNRTG 2 cut(s) 692, 2772
Msp20I TGGCCA 1 cut(s) 2351
MspA1I CMGCKG 3 cut(s) 171, 2681, 2941
MspI CCGG 4 cut(s) 442, 522, 813, 2886
MspR9I CCNGG 3 cut(s) 234, 1212, 2389
Mva1269I GAATGC 1 cut(s) 1788
MvaI CCWGG 3 cut(s) 234, 1212, 2389
MvnI CGCG 3 cut(s) 319, 2157, 2957
MwoI GCNNNNNNNGC 8 cut(s) 585, 946, 1516, 1544, 2154, 2206, 2725, 2977
NarI GGCGCC 1 cut(s) 2417
NcoI CCATGG 2 cut(s) 2767, 2879
NdeI CATATG 1 cut(s) 1666
NmuCI GTSAC 3 cut(s) 160, 725, 2375
NsiI ATGCAT 1 cut(s) 1462
NspI RCATGY 1 cut(s) 2701
PceI AGGCCT 2 cut(s) 1711, 2692
PciI ACATGT 1 cut(s) 2697
PcsI WCGNNNNNNNCGW 2 cut(s) 3075, 3084
PctI GAATGC 1 cut(s) 1788
PdmI GAANNNNTTC 1 cut(s) 2535
PfeI GAWTC 4 cut(s) 628, 977, 1410, 2258
PflMI CCANNNNNTGG 1 cut(s) 2177
PinAI ACCGGT 2 cut(s) 441, 2885
PleI GAGTC 3 cut(s) 487, 853, 1842
PluTI GGCGCC 1 cut(s) 2420
PpsI GAGTC 3 cut(s) 487, 853, 1842
PscI ACATGT 1 cut(s) 2697
PshBI ATTAAT 1 cut(s) 788
Psp124BI GAGCTC 3 cut(s) 1025, 1840, 2837
Psp6I CCWGG 3 cut(s) 232, 1210, 2387
PspEI GGTNACC 1 cut(s) 261
PspGI CCWGG 3 cut(s) 232, 1210, 2387
PspOMI GGGCCC 2 cut(s) 671, 2556
PstI CTGCAG 2 cut(s) 2951, 2979
PstNI CAGNNNCTG 1 cut(s) 424
PsuI RGATCY 6 cut(s) 648, 862, 1611, 2599, 2755, 2914
PvuII CAGCTG 2 cut(s) 171, 2681
RsaI GTAC 8 cut(s) 240, 912, 917, 1045, 1349, 1975, 2132, 2277
RsaNI GTAC 8 cut(s) 239, 911, 916, 1044, 1348, 1974, 2131, 2276
RseI CAYNNNNRTG 2 cut(s) 692, 2772
SacI GAGCTC 3 cut(s) 1025, 1840, 2837
ScaI AGTACT 1 cut(s) 917
SchI GAGTC 3 cut(s) 487, 854, 1842
ScrFI CCNGG 3 cut(s) 234, 1212, 2389
SduI GDGCHC 8 cut(s) 675, 1025, 1521, 1840, 2560, 2837, 2967, 2973
SexAI ACCWGGT 1 cut(s) 232
SfaNI GCATC 5 cut(s) 1192, 1469, 2731, 2772, 3084
SfcI CTRYAG 7 cut(s) 416, 635, 1287, 2403, 2464, 2947, 2975
SfoI GGCGCC 1 cut(s) 2418
SinI GGWCC 8 cut(s) 1670, 2168, 2180, 2311, 2613, 2730, 2876, 2883
SmiMI CAYNNNNRTG 2 cut(s) 692, 2772
SmlI CTYRAG 2 cut(s) 1293, 1520
SmoI CTYRAG 2 cut(s) 1293, 1520
SseBI AGGCCT 2 cut(s) 1711, 2692
SsiI CCGC 6 cut(s) 317, 1483, 2728, 2939, 2955, 2997
SspDI GGCGCC 1 cut(s) 2416
SspI AATATT 1 cut(s) 2536
SspMI CTAG 8 cut(s) 390, 431, 657, 665, 684, 1607, 2222, 3014
SstI GAGCTC 3 cut(s) 1025, 1840, 2837
StuI AGGCCT 2 cut(s) 1711, 2692
StyD4I CCNGG 3 cut(s) 232, 1210, 2387
StyI CCWWGG 4 cut(s) 1399, 2221, 2767, 2879
TaaI ACNGT 9 cut(s) 420, 457, 915, 1038, 1269, 1472, 2118, 2468, 2494
TaiI ACGT 3 cut(s) 201, 820, 2909
TaqI TCGA 4 cut(s) 120, 1851, 2521, 3078
TaqII GACCGA 1 cut(s) 2156
TatI WGTACW 7 cut(s) 238, 910, 915, 1043, 1347, 2130, 2275
TauI GCSGC 1 cut(s) 2999
TfiI GAWTC 4 cut(s) 628, 977, 1410, 2258
TscAI CASTG 7 cut(s) 310, 730, 846, 949, 1267, 2271, 2751
TseFI GTSAC 3 cut(s) 160, 725, 2375
TseI GCWGC 9 cut(s) 168, 171, 1395, 1892, 2062, 2681, 2941, 2949, 2977
Tsp45I GTSAC 3 cut(s) 160, 725, 2375
TspGWI ACGGA 2 cut(s) 1422, 3126
TspRI CASTG 7 cut(s) 310, 730, 846, 949, 1267, 2271, 2751
Van91I CCANNNNNTGG 1 cut(s) 2177
VpaK11BI GGWCC 8 cut(s) 1670, 2168, 2180, 2311, 2613, 2730, 2876, 2883
VspI ATTAAT 1 cut(s) 788
XapI RAATTY 8 cut(s) 749, 899, 1190, 1226, 1577, 1696, 2027, 3138
XbaI TCTAGA 1 cut(s) 664
XceI RCATGY 1 cut(s) 2701
XmaJI CCTAGG 1 cut(s) 2221
XmiI GTMKAC 3 cut(s) 1950, 2463, 3004
XmnI GAANNNNTTC 1 cut(s) 2535
XspI CTAG 8 cut(s) 390, 431, 657, 665, 684, 1607, 2222, 3014
ZrmI AGTACT 1 cut(s) 917
Zsp2I ATGCAT 1 cut(s) 1462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.