Rorug01G0123900

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
21327577 .. 21340942
13366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0123900.1

Sequence Viewer

Length: 2574 bp
ATGGAATCAACGCCGAGGCCAAGCTCCGGCCGATCAACGCCCCTCCGGGACTCCAATGACTCCGACAAGATGGAGGCCACCGGTCTCTGGGACGCCCTCGAATGGACCTTTGAGCCGGTCTCACGCTCCACTCCACGCGCCGTTTCGCATTTGAAGTTGGATTGCTTGCTTGAAGGTGAGCAAGTTGAAGTTGAGGGGTATGGCGTTGTTCTTATTAATACTGATGAGGCAGGTACCTTGATAGTCACCAATTTTCGTCTTCTTTTTCTGAGTGAGGGAACTAGGAATGTTATTCCTCTTGGCACGATACCTTTGGCAACAATTGAGAAGTTCAACAAAATTGTTGTAAAGAATCAATCAACCCCTCGTCATTCTGACAAGACTCCATCAAGAAGATTGCTTCAGGTCATTGGTAAAGACATGAGGATAATAGTCTTTGGGTTTCGCCCTAAAACAAGGCAGAGACATGCAGTGTTTGATGCATTATTAAAGTGTACAAAGCCAGCGAGCCTATGGGATCTTTTTTCTTTTGTTTCTGGACCTTCCAAATATAGTAACACTAATCCAAAGGTGCGGTTACTGAATGAGTATTTTCGGCTTCTTGGAAAAGGCTCCCGTGCGTCTATGAATATGATTGAAGATGGGTCATTCACTTTGTCAAATGATTTGTGGAGAATAAGTAGTGTAAATTCTAGCTATTCATTGTGCCAGAGTTATCCATTTGCCTTGATTGTTCCGAAATCCATTACTGATGAAGAAGTGCTCCAAGCTTCCAGCTTCCGTGCAAGATGTCGGTTGCCTGTAGTTACATGGTGTCATCCAAGAACAGGAGCAGTTCTGGCACGTTCATCCCAACCCTTAGTTGGTATCATGATGAACATGAGGAGCAACACAGATGAAAAGCTCGTTGCTGCCCTTTGCTCTGAACTTACTGGTAGTGGTGGTAAAAGAAGGAAGCTATATATAGCAGATGCAAGACCACGAAAAAATGCTTTAGCTAATGGTGCAATGGGAGGTGGTTCTGAGTCATCTTCAAATTACCTTCAGTCTGAGATTGTTTTCTTTGGGATAGACAACATCCATGCGATGAGAGATAGTTTTGCTCGGCTCAGAGATTACTTAGATACTTATGGTACAGCTTCATCGGATGGAATGTCATCTTTCTTGAGGGATGGTGGGTGGAGTTGGGGTGGAGGCAACCTTAGCAGTATGTCTGCATCGGTGTCAACTCTTGGAGACAGTGGTTGGTTTAAACATGTTCAAAGTGTGTTAGCTGGTTCGGCTTGGATTGCTGCACGCGTTGCTCTGGAATCGGCATCGGTGCTTGTACATTGCAGTGATGGATGGGATAGAACTACTCAGCTGGTTTCGCTTGCCGTTTTGTTGCTTGATCCATACTATCGGACTTTAAATGGGTTCCAGGCACTCATTGAGAAAGATTGGCTAGCATTTGGTCACCCATTTGCAGATCGAGTTGGCATGCCAACTGTAACCGGAAGTACAAGCATACCTTCTGAGTTACCAAGGCAGTCTTCTACTGGGAGTATCCAATCATCACCCAATCGCCAGTCAGGAGCATCCTTCACATCTCAAGCTCCTACATCTCACGCACAGACTTCAAACAACTATTCTCCCATATTTCTGCAGTGGGTAGATTGTGTTTCACAGCTATTGCGGATGTATCCTTTTGCTTTTGAGTTCTCTTCGGTTTTCCTGGTGGATCTATTGGATTGTATTCTATCCTGCCGCTTTGGAAACTTCTTTTGTAATAGTGAAAAGGAGAGGCAACAGTGTGGGGTACCCGAAGCTTGTGGATGCATGTGGGCATATTTGGCTGATTTGCGCTCTTTAGATGGAAATTCTCATGTGCACTACAATTATTTCTATGATCCACTGAAACACAATGGTCCGCTATTACCTCCAGCAGCTGCTTTAGCACCAACTCTATGGCCACAATTCCATTTGCGATGGGCTTGTCCCTCAGAGGCTCAAGCTGGAGAGCTAGAAGCTCAATTTAGGAAGATGGATGTTAAATTCGTGGAACTGCAGAAGGCAAAGGAAGTGGCAGAAAGGAAAGCTAAAGAAATCACTACTCTCATGGAAACCTTAAGTGCAGATGTAAGACATGAAAAGCGAGTCAGCAGCTCGGCTATGAAGTTGGTCAAGAGGGCAAACAAGGAGAGTGAGGCCATGAAGCGAGCTATACAGTCACTGGGGTGCAAGGTACATTTTTCAAGTAGCGGAGATTGCACTGTTGACATTGAAAGTAGTGTAATTGAAGGTCCACAAAAATTAGTTTGTTCTTCTTCAAAAAGACAATCAGATGGCACTCTGCAGAATGATGAGAAATCAGACCTGTCTGTTTCCATTACGGTCGTGGCAGATGATGTTGATGGCAGCAATCCAATTGGTCAAGTTTGTGAAACTTTATGCCCATTACGCATGCGAGATGGAGGCTGCAGGTGGCCAGATGCTGGCTGTGCTCAATTGGGTAGCCAATTTGTTGGACTGAAGGCCAACTTTGAGGCATTTGATCAACTTTCAATCTACGATAGTTACTTCCAGCCTAAATAA

Protein Analysis

857

Amino Acids

94.54

Weight (kDa)

7.94

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myotub-related PF06602 218 - 596 6.3e-125 Myotubularin-like phosphatase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2451
Acc36I ACCTGC 2 cut(s) 221, 2451
Acc65I GGTACC 2 cut(s) 233, 1798
AccB1I GGYRCC 2 cut(s) 233, 1798
AccB7I CCANNNNNTGG 1 cut(s) 2474
AccII CGCG 2 cut(s) 138, 1299
AciI CCGC 5 cut(s) 574, 1675, 1747, 1910, 2241
AclWI GGATC 4 cut(s) 525, 1385, 1728, 1883
AcoI YGGCCR 3 cut(s) 28, 1949, 2465
AcsI RAATTY 3 cut(s) 688, 1858, 2033
AcuI CTGAAG 3 cut(s) 386, 1028, 2531
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 7 cut(s) 235, 496, 1135, 1329, 1501, 1800, 2226
AfiI CCNNNNNNNGG 6 cut(s) 26, 87, 102, 827, 863, 2474
AflII CTTAAG 1 cut(s) 2107
AflIII ACRYGT 2 cut(s) 1255, 1297
AgeI ACCGGT 1 cut(s) 80
AjnI CCWGG 2 cut(s) 1419, 1713
AjuI GAANNNNNNNTTGG 2 cut(s) 1516, 1548
AleI CACNNNNGTG 1 cut(s) 2215
Alw21I GWGCWC 3 cut(s) 765, 1872, 2485
Alw26I GTCTC 4 cut(s) 89, 124, 457, 1230
Alw44I GTGCAC 1 cut(s) 1868
AlwI GGATC 4 cut(s) 525, 1385, 1728, 1883
AlwNI CAGNNNCTG 3 cut(s) 1928, 2212, 2474
AoxI GGCC 7 cut(s) 17, 28, 75, 1949, 2187, 2465, 2514
ApaLI GTGCAC 1 cut(s) 1868
ApeKI GCWGC 7 cut(s) 911, 1292, 1925, 1928, 2142, 2397, 2457
ApoI RAATTY 3 cut(s) 688, 1858, 2033
AseI ATTAAT 1 cut(s) 216
AsiGI ACCGGT 1 cut(s) 80
Asp718I GGTACC 2 cut(s) 233, 1798
AspLEI GCGC 2 cut(s) 140, 1845
AspS9I GGNCC 4 cut(s) 105, 539, 1907, 2282
AsuC2I CCSGG 1 cut(s) 47
AsuHPI GGTGA 4 cut(s) 188, 238, 1448, 1548
AsuNHI GCTAGC 1 cut(s) 1444
AvaII GGWCC 4 cut(s) 105, 539, 1907, 2282
BaeGI GKGCMC 1 cut(s) 1872
BalI TGGCCA 2 cut(s) 1951, 2467
BanI GGYRCC 2 cut(s) 233, 1798
BbsI GAAGAC 2 cut(s) 251, 1524
Bbv12I GWGCWC 3 cut(s) 765, 1872, 2485
BbvI GCAGC 7 cut(s) 898, 1279, 1915, 1937, 2154, 2409, 2444
BceAI ACGGC 2 cut(s) 125, 1361
BciT130I CCWGG 2 cut(s) 1421, 1715
BciVI GTATCC 2 cut(s) 1556, 1692
BclI TGATCA 1 cut(s) 2533
BcnI CCSGG 1 cut(s) 47
BcoDI GTCTC 4 cut(s) 89, 124, 457, 1230
BfaI CTAG 4 cut(s) 282, 693, 1445, 2003
BfmI CTRYAG 5 cut(s) 801, 1643, 2045, 2333, 2458
BfrI CTTAAG 1 cut(s) 2107
BfuAI ACCTGC 2 cut(s) 221, 2451
BfuI GTATCC 2 cut(s) 1556, 1692
BisI GCNGC 8 cut(s) 912, 1293, 1747, 1926, 1929, 2143, 2398, 2458
BlsI GCNGC 8 cut(s) 913, 1294, 1748, 1927, 1930, 2144, 2399, 2459
Bme1390I CCNGG 3 cut(s) 47, 1421, 1715
Bme18I GGWCC 4 cut(s) 105, 539, 1907, 2282
BmgT120I GGNCC 4 cut(s) 105, 539, 1907, 2282
BmiI GGNNCC 4 cut(s) 235, 613, 1418, 1800
BmrFI CCNGG 3 cut(s) 47, 1421, 1715
BmrI ACTGGG 2 cut(s) 1548, 2222
BmsI GCATC 7 cut(s) 469, 961, 1226, 1325, 1586, 1805, 2461
BmtI GCTAGC 1 cut(s) 1448
BmuI ACTGGG 2 cut(s) 1548, 2222
BpiI GAAGAC 2 cut(s) 251, 1524
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 2 cut(s) 1905, 2016
Bpu10I CCTNAGC 1 cut(s) 1202
BpuEI CTTGAG 3 cut(s) 1186, 1575, 1974
BpuMI CCSGG 1 cut(s) 47
BsaHI GRCGYC 1 cut(s) 93
BsaI GGTCTC 2 cut(s) 89, 124
BsaJI CCNNGG 2 cut(s) 14, 1523
BsaWI WCCGGW 2 cut(s) 80, 1493
BsaXI ACNNNNNCTCC 4 cut(s) 664, 694, 1174, 1204
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 87, 102, 827, 863, 2474
Bse118I RCCGGY 2 cut(s) 80, 115
Bse1I ACTGG 4 cut(s) 937, 1543, 1567, 2217
Bse3DI GCAATG 2 cut(s) 1014, 1330
BseBI CCWGG 2 cut(s) 1421, 1715
BseDI CCNNGG 2 cut(s) 14, 1523
BseLI CCNNNNNNNGG 6 cut(s) 26, 87, 102, 827, 863, 2474
BseMI GCAATG 2 cut(s) 1014, 1330
BseMII CTCAG 7 cut(s) 260, 1014, 1041, 1123, 1373, 1506, 1995
BseNI ACTGG 4 cut(s) 937, 1543, 1567, 2217
BseRI GAGGAG 1 cut(s) 898
BseSI GKGCMC 1 cut(s) 1872
BseX3I CGGCCG 1 cut(s) 28
BseXI GCAGC 7 cut(s) 898, 1279, 1915, 1937, 2154, 2409, 2444
BsgI GTGCAG 2 cut(s) 1278, 2133
Bsh1236I CGCG 2 cut(s) 138, 1299
Bsh1285I CGRYCG 2 cut(s) 31, 2376
BshFI GGCC 7 cut(s) 19, 30, 77, 1951, 2189, 2467, 2516
BshNI GGYRCC 2 cut(s) 233, 1798
BshTI ACCGGT 1 cut(s) 80
BsiEI CGRYCG 2 cut(s) 31, 2376
BsiHKAI GWGCWC 3 cut(s) 765, 1872, 2485
BsiSI CCGG 5 cut(s) 27, 46, 81, 116, 1494
BslFI GGGAC 3 cut(s) 62, 104, 1962
BslI CCNNNNNNNGG 6 cut(s) 26, 87, 102, 827, 863, 2474
BsmAI GTCTC 4 cut(s) 89, 124, 457, 1230
BsmFI GGGAC 3 cut(s) 62, 104, 1962
BsnI GGCC 7 cut(s) 19, 30, 77, 1951, 2189, 2467, 2516
Bso31I GGTCTC 2 cut(s) 89, 124
Bsp1286I GDGCHC 3 cut(s) 765, 1872, 2485
Bsp1407I TGTACA 2 cut(s) 494, 1327
Bsp143I GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
BspACI CCGC 5 cut(s) 574, 1675, 1747, 1910, 2241
BspANI GGCC 7 cut(s) 19, 30, 77, 1951, 2189, 2467, 2516
BspCNI CTCAG 7 cut(s) 261, 1015, 1042, 1122, 1372, 1507, 1994
BspFNI CGCG 2 cut(s) 138, 1299
BspHI TCATGA 1 cut(s) 870
BspLI GGNNCC 4 cut(s) 235, 613, 1418, 1800
BspMAI CTGCAG 4 cut(s) 1647, 2049, 2337, 2462
BspMI ACCTGC 2 cut(s) 221, 2451
BspOI GCTAGC 1 cut(s) 1448
BspPI GGATC 4 cut(s) 525, 1385, 1728, 1883
BspT107I GGYRCC 2 cut(s) 233, 1798
BspTI CTTAAG 1 cut(s) 2107
BspTNI GGTCTC 2 cut(s) 89, 124
BsrDI GCAATG 2 cut(s) 1014, 1330
BsrFI RCCGGY 2 cut(s) 80, 115
BsrGI TGTACA 2 cut(s) 494, 1327
BsrI ACTGG 4 cut(s) 937, 1543, 1567, 2217
BssAI RCCGGY 2 cut(s) 80, 115
BssECI CCNNGG 2 cut(s) 14, 1523
BssMI GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
BssNI GRCGYC 1 cut(s) 93
BssT1I CCWWGG 1 cut(s) 1523
Bst2UI CCWGG 2 cut(s) 1421, 1715
Bst4CI ACNGT 6 cut(s) 1241, 1489, 1791, 2208, 2254, 2374
Bst6I CTCTTC 1 cut(s) 1708
BstACI GRCGYC 1 cut(s) 93
BstAFI CTTAAG 1 cut(s) 2107
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstAUI TGTACA 2 cut(s) 494, 1327
BstEII GGTNACC 1 cut(s) 1454
BstFNI CGCG 2 cut(s) 138, 1299
BstHHI GCGC 2 cut(s) 140, 1845
BstKTI GATC 7 cut(s) 35, 520, 1393, 1471, 1723, 1891, 2536
BstMAI GTCTC 4 cut(s) 89, 124, 457, 1230
BstMBI GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
BstMCI CGRYCG 2 cut(s) 31, 2376
BstNI CCWGG 2 cut(s) 1421, 1715
BstNSI RCATGY 5 cut(s) 470, 1259, 1483, 1822, 2446
BstPI GGTNACC 1 cut(s) 1454
BstSCI CCNGG 3 cut(s) 45, 1419, 1713
BstSFI CTRYAG 5 cut(s) 801, 1643, 2045, 2333, 2458
BstSLI GKGCMC 1 cut(s) 1872
BstUI CGCG 2 cut(s) 138, 1299
BstV1I GCAGC 7 cut(s) 898, 1279, 1915, 1937, 2154, 2409, 2444
BstV2I GAAGAC 2 cut(s) 251, 1524
BstX2I RGATCY 2 cut(s) 517, 1720
BstXI CCANNNNNNTGG 2 cut(s) 1947, 2504
BstYI RGATCY 2 cut(s) 517, 1720
BstZI CGGCCG 1 cut(s) 28
BsuI GTATCC 2 cut(s) 1556, 1692
BsuRI GGCC 7 cut(s) 19, 30, 77, 1951, 2189, 2467, 2516
BtgZI GCGATG 2 cut(s) 1100, 1981
BtsI GCAGTG 3 cut(s) 477, 1342, 1652
BtsIMutI CAGTG 8 cut(s) 477, 1246, 1342, 1652, 1796, 1892, 2210, 2250
BveI ACCTGC 2 cut(s) 221, 2451
CaiI CAGNNNCTG 3 cut(s) 1928, 2212, 2474
CciI TCATGA 1 cut(s) 870
CfoI GCGC 2 cut(s) 140, 1845
Cfr10I RCCGGY 2 cut(s) 80, 115
Cfr13I GGNCC 4 cut(s) 105, 539, 1907, 2282
CseI GACGC 2 cut(s) 101, 609
Csp6I GTAC 7 cut(s) 234, 495, 1134, 1328, 1500, 1799, 2225
CspAI ACCGGT 1 cut(s) 80
CspCI CAANNNNNGTGG 2 cut(s) 2043, 2078
CviQI GTAC 7 cut(s) 234, 495, 1134, 1328, 1500, 1799, 2225
DpnI GATC 7 cut(s) 34, 519, 1392, 1470, 1722, 1890, 2535
DpnII GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
DraI TTTAAA 2 cut(s) 1252, 1410
EaeI YGGCCR 3 cut(s) 28, 1949, 2465
EagI CGGCCG 1 cut(s) 28
Eam1104I CTCTTC 1 cut(s) 1708
EarI CTCTTC 1 cut(s) 1708
EclXI CGGCCG 1 cut(s) 28
Eco130I CCWWGG 1 cut(s) 1523
Eco31I GGTCTC 2 cut(s) 89, 124
Eco47I GGWCC 4 cut(s) 105, 539, 1907, 2282
Eco52I CGGCCG 1 cut(s) 28
Eco57I CTGAAG 3 cut(s) 386, 1028, 2531
Eco91I GGTNACC 1 cut(s) 1454
EcoO65I GGTNACC 1 cut(s) 1454
EcoRII CCWGG 2 cut(s) 1419, 1713
EcoT14I CCWWGG 1 cut(s) 1523
EcoT22I ATGCAT 2 cut(s) 484, 1820
ErhI CCWWGG 1 cut(s) 1523
FalI AAGNNNNNCTT 6 cut(s) 1495, 1527, 1516, 1548, 2504, 2536
FaqI GGGAC 3 cut(s) 62, 104, 1962
FbaI TGATCA 1 cut(s) 2533
Fnu4HI GCNGC 8 cut(s) 912, 1293, 1747, 1926, 1929, 2143, 2398, 2458
Fsp4HI GCNGC 8 cut(s) 912, 1293, 1747, 1926, 1929, 2143, 2398, 2458
FspBI CTAG 4 cut(s) 282, 693, 1445, 2003
GlaI GCGC 2 cut(s) 139, 1844
GluI GCNGC 8 cut(s) 912, 1293, 1747, 1926, 1929, 2143, 2398, 2458
GsuI CTGGAG 2 cut(s) 1905, 2016
HaeIII GGCC 7 cut(s) 19, 30, 77, 1951, 2189, 2467, 2516
HapII CCGG 5 cut(s) 27, 46, 81, 116, 1494
HgaI GACGC 2 cut(s) 101, 609
HhaI GCGC 2 cut(s) 140, 1845
Hin1I GRCGYC 1 cut(s) 93
Hin6I GCGC 2 cut(s) 138, 1843
HinP1I GCGC 2 cut(s) 138, 1843
HincII GTYRAC 2 cut(s) 1227, 2257
HindII GTYRAC 2 cut(s) 1227, 2257
HindIII AAGCTT 2 cut(s) 768, 1806
HinfI GANTC 8 cut(s) 5, 50, 59, 352, 382, 1025, 1310, 2136
HpaII CCGG 5 cut(s) 27, 46, 81, 116, 1494
HphI GGTGA 4 cut(s) 188, 238, 1448, 1548
Hpy166II GTNNAC 5 cut(s) 495, 1227, 1870, 2257, 2285
Hpy188III TCNNGA 7 cut(s) 390, 537, 871, 1165, 1307, 1572, 2164
Hpy8I GTNNAC 5 cut(s) 495, 1227, 1870, 2257, 2285
HpyAV CCTTC 9 cut(s) 167, 552, 945, 1052, 1521, 1591, 2044, 2273, 2506
HpyCH4III ACNGT 6 cut(s) 1241, 1489, 1791, 2208, 2254, 2374
HpyCH4IV ACGT 1 cut(s) 844
HpySE526I ACGT 1 cut(s) 844
Hsp92I GRCGYC 1 cut(s) 93
HspAI GCGC 2 cut(s) 138, 1843
KpnI GGTACC 2 cut(s) 237, 1802
Ksp22I TGATCA 1 cut(s) 2533
Kzo9I GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
LmnI GCTCC 8 cut(s) 29, 131, 617, 768, 830, 885, 1574, 1600
Lsp1109I GCAGC 7 cut(s) 898, 1279, 1915, 1937, 2154, 2409, 2444
LweI GCATC 7 cut(s) 469, 961, 1226, 1325, 1586, 1805, 2461
MaeI CTAG 4 cut(s) 282, 693, 1445, 2003
MaeII ACGT 1 cut(s) 844
MaeIII GTNAC 9 cut(s) 244, 554, 576, 805, 1454, 1489, 1518, 2208, 2555
MalI GATC 7 cut(s) 34, 519, 1392, 1470, 1722, 1890, 2535
MboI GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
MfeI CAATTG 3 cut(s) 321, 2406, 2486
MflI RGATCY 2 cut(s) 517, 1720
MhlI GDGCHC 3 cut(s) 765, 1872, 2485
MlsI TGGCCA 2 cut(s) 1951, 2467
MluI ACGCGT 1 cut(s) 1297
MluNI TGGCCA 2 cut(s) 1951, 2467
MlyI GAGTC 5 cut(s) 44, 53, 376, 1034, 2145
MmeI TCCRAC 3 cut(s) 87, 138, 2485
Mox20I TGGCCA 2 cut(s) 1951, 2467
Mph1103I ATGCAT 2 cut(s) 484, 1820
MscI TGGCCA 2 cut(s) 1951, 2467
MseI TTAA 6 cut(s) 216, 488, 1251, 1409, 2031, 2108
MslI CAYNNNNRTG 2 cut(s) 1335, 2215
Msp20I TGGCCA 2 cut(s) 1951, 2467
MspA1I CMGCKG 2 cut(s) 1363, 1928
MspCI CTTAAG 1 cut(s) 2107
MspI CCGG 5 cut(s) 27, 46, 81, 116, 1494
MspR9I CCNGG 3 cut(s) 47, 1421, 1715
MssI GTTTAAAC 1 cut(s) 1252
MunI CAATTG 3 cut(s) 321, 2406, 2486
MvaI CCWGG 2 cut(s) 1421, 1715
MvnI CGCG 2 cut(s) 138, 1299
NciI CCSGG 1 cut(s) 47
NdeII GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
NheI GCTAGC 1 cut(s) 1444
NlaIV GGNNCC 4 cut(s) 235, 613, 1418, 1800
NmeAIII GCCGAG 3 cut(s) 39, 1084, 2126
NmuCI GTSAC 3 cut(s) 244, 1454, 2208
NsiI ATGCAT 2 cut(s) 484, 1820
NspI RCATGY 5 cut(s) 470, 1259, 1483, 1822, 2446
OliI CACNNNNGTG 1 cut(s) 2215
PaeI GCATGC 2 cut(s) 1483, 2446
PagI TCATGA 1 cut(s) 870
PaqCI CACCTGC 1 cut(s) 2451
PciI ACATGT 1 cut(s) 1255
PfeI GAWTC 3 cut(s) 5, 352, 1310
PflMI CCANNNNNTGG 1 cut(s) 2474
PfoI TCCNGGA 1 cut(s) 45
PinAI ACCGGT 1 cut(s) 80
PkrI GCNGC 8 cut(s) 913, 1294, 1748, 1927, 1930, 2144, 2399, 2459
PleI GAGTC 5 cut(s) 44, 53, 376, 1033, 2144
PmeI GTTTAAAC 1 cut(s) 1252
PpsI GAGTC 5 cut(s) 44, 53, 376, 1033, 2144
PscI ACATGT 1 cut(s) 1255
PshBI ATTAAT 1 cut(s) 216
Psp6I CCWGG 2 cut(s) 1419, 1713
PspEI GGTNACC 1 cut(s) 1454
PspGI CCWGG 2 cut(s) 1419, 1713
PspN4I GGNNCC 4 cut(s) 235, 613, 1418, 1800
PspPI GGNCC 4 cut(s) 105, 539, 1907, 2282
PstI CTGCAG 4 cut(s) 1647, 2049, 2337, 2462
PstNI CAGNNNCTG 3 cut(s) 1928, 2212, 2474
PsuI RGATCY 2 cut(s) 517, 1720
PvuII CAGCTG 2 cut(s) 1363, 1928
RsaI GTAC 7 cut(s) 235, 496, 1135, 1329, 1501, 1800, 2226
RsaNI GTAC 7 cut(s) 234, 495, 1134, 1328, 1500, 1799, 2225
RseI CAYNNNNRTG 2 cut(s) 1335, 2215
SaqAI TTAA 6 cut(s) 216, 488, 1251, 1409, 2031, 2108
SatI GCNGC 8 cut(s) 912, 1293, 1747, 1926, 1929, 2143, 2398, 2458
Sau3AI GATC 7 cut(s) 32, 517, 1390, 1468, 1720, 1888, 2533
Sau96I GGNCC 4 cut(s) 105, 539, 1907, 2282
SchI GAGTC 5 cut(s) 44, 53, 376, 1034, 2145
ScrFI CCNGG 3 cut(s) 47, 1421, 1715
SduI GDGCHC 3 cut(s) 765, 1872, 2485
SfaNI GCATC 7 cut(s) 469, 961, 1226, 1325, 1586, 1805, 2461
SfcI CTRYAG 5 cut(s) 801, 1643, 2045, 2333, 2458
SinI GGWCC 4 cut(s) 105, 539, 1907, 2282
SmiMI CAYNNNNRTG 2 cut(s) 1335, 2215
SmlI CTYRAG 4 cut(s) 1165, 1590, 1989, 2107
SmoI CTYRAG 4 cut(s) 1165, 1590, 1989, 2107
SphI GCATGC 2 cut(s) 1483, 2446
SsiI CCGC 5 cut(s) 574, 1675, 1747, 1910, 2241
SspMI CTAG 4 cut(s) 282, 693, 1445, 2003
StyD4I CCNGG 3 cut(s) 45, 1419, 1713
StyI CCWWGG 1 cut(s) 1523
TaaI ACNGT 6 cut(s) 1241, 1489, 1791, 2208, 2254, 2374
TaiI ACGT 1 cut(s) 847
TaqI TCGA 2 cut(s) 99, 1471
TatI WGTACW 3 cut(s) 494, 1327, 1499
TauI GCSGC 1 cut(s) 1749
TfiI GAWTC 3 cut(s) 5, 352, 1310
Tru1I TTAA 6 cut(s) 216, 488, 1251, 1409, 2031, 2108
Tru9I TTAA 6 cut(s) 216, 488, 1251, 1409, 2031, 2108
TscAI CASTG 8 cut(s) 477, 1246, 1342, 1652, 1796, 1899, 2217, 2257
TseFI GTSAC 3 cut(s) 244, 1454, 2208
TseI GCWGC 7 cut(s) 911, 1292, 1925, 1928, 2142, 2397, 2457
Tsp45I GTSAC 3 cut(s) 244, 1454, 2208
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 8 cut(s) 477, 1246, 1342, 1652, 1796, 1899, 2217, 2257
Van91I CCANNNNNTGG 1 cut(s) 2474
Vha464I CTTAAG 1 cut(s) 2107
VneI GTGCAC 1 cut(s) 1868
VpaK11BI GGWCC 4 cut(s) 105, 539, 1907, 2282
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 3 cut(s) 688, 1858, 2033
XceI RCATGY 5 cut(s) 470, 1259, 1483, 1822, 2446
XcmI CCANNNNNNNNNTGG 3 cut(s) 510, 860, 2374
XspI CTAG 4 cut(s) 282, 693, 1445, 2003
Zsp2I ATGCAT 2 cut(s) 484, 1820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.