RLG00000009208

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
48819737 .. 48823537
3801 bp
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UTR
Exon/CDS
Intron
RLM00000009208

Sequence Viewer

Length: 507 bp
ATGACTTATAGCTTTTACCATTGGGTTAGAGTTGTCAATGGCGTCCTGCCTGCTGGTGACTATTCCTTTGCTAAGAATAGCAAGTTGAACAAAGATGTAAATGGAACTAGGAGCACTGGAATAATTGGTGATAGAGGATCCAGAGAAAGTCAGAGTGTGATAAAGACTGCCTTGGTTCTTTATTGCAGAAATTTAGTAGAGAGTTATTCCTCATCAGCTGATAATATAAGTAGAGTCGCAACATGCTTAAAAAGAAATTATCCATGTTCTGCTTTGGGAGCAAAACATCATTCCTTACATATTAATTGTGGTGGAAGGGAGATAAATATTGGTGGGGTTAAGTATCAAGTTGATACAGAACAAAAAGGAACTACTGGCATCCCAGATAGAGGATTTTATGGTCCTCTCATATTAGCTATATCAGTAGATCCTAGTATTATGTGGAGTAGGGATTGCATAGGAGGAAAGATCGCTGTAGATAAAGGTTTGAAGCATGTTAAAGTCTAG

Protein Analysis

169

Amino Acids

18.31

Weight (kDa)

9.44

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 132, 145, 422
AcsI RAATTY 1 cut(s) 190
AcyI GRCGYC 1 cut(s) 42
AfiI CCNNNNNNNGG 1 cut(s) 389
AgsI TTSAA 2 cut(s) 88, 490
AluBI AGCT 3 cut(s) 12, 218, 416
AluI AGCT 3 cut(s) 12, 218, 416
Alw21I GWGCWC 1 cut(s) 116
AlwI GGATC 3 cut(s) 132, 145, 422
ApoI RAATTY 1 cut(s) 190
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AseI ATTAAT 1 cut(s) 303
AspS9I GGNCC 1 cut(s) 401
AsuHPI GGTGA 2 cut(s) 68, 140
AvaII GGWCC 1 cut(s) 401
BamHI GGATCC 1 cut(s) 137
Bbv12I GWGCWC 1 cut(s) 116
BfaI CTAG 3 cut(s) 108, 432, 505
BfmI CTRYAG 1 cut(s) 474
Bme18I GGWCC 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 1 cut(s) 139
BmsI GCATC 1 cut(s) 387
BsaHI GRCGYC 1 cut(s) 42
BsaJI CCNNGG 1 cut(s) 171
Bsc4I CCNNNNNNNGG 1 cut(s) 389
Bse1I ACTGG 2 cut(s) 121, 379
BseDI CCNNGG 1 cut(s) 171
BseGI GGATG 1 cut(s) 378
BseLI CCNNNNNNNGG 1 cut(s) 389
BseNI ACTGG 2 cut(s) 121, 379
BsiHKAI GWGCWC 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 389
Bsp1286I GDGCHC 1 cut(s) 116
Bsp143I GATC 3 cut(s) 137, 427, 468
BspLI GGNNCC 1 cut(s) 139
BspPI GGATC 3 cut(s) 132, 145, 422
BsrI ACTGG 2 cut(s) 121, 379
BssECI CCNNGG 1 cut(s) 171
BssMI GATC 3 cut(s) 137, 427, 468
BssNI GRCGYC 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 171
BstACI GRCGYC 1 cut(s) 42
BstC8I GCNNGC 1 cut(s) 51
BstDEI CTNAG 1 cut(s) 72
BstF5I GGATG 1 cut(s) 378
BstKTI GATC 3 cut(s) 140, 430, 471
BstMBI GATC 3 cut(s) 137, 427, 468
BstMWI GCNNNNNNNGC 1 cut(s) 278
BstNSI RCATGY 2 cut(s) 246, 497
BstSFI CTRYAG 1 cut(s) 474
BstX2I RGATCY 2 cut(s) 137, 427
BstYI RGATCY 2 cut(s) 137, 427
BtsCI GGATG 1 cut(s) 378
BtsIMutI CAGTG 1 cut(s) 114
Cac8I GCNNGC 1 cut(s) 51
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 1 cut(s) 31
CviAII CATG 3 cut(s) 243, 264, 494
CviJI RGCY 3 cut(s) 12, 218, 416
CviKI_1 RGCY 3 cut(s) 12, 218, 416
DdeI CTNAG 1 cut(s) 72
DpnI GATC 3 cut(s) 139, 429, 470
DpnII GATC 3 cut(s) 137, 427, 468
Eco130I CCWWGG 1 cut(s) 171
Eco47I GGWCC 1 cut(s) 401
EcoT14I CCWWGG 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 171
FaeI CATG 3 cut(s) 246, 267, 497
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FatI CATG 3 cut(s) 242, 263, 493
FokI GGATG 1 cut(s) 365
FspBI CTAG 3 cut(s) 108, 432, 505
HgaI GACGC 1 cut(s) 31
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 3 cut(s) 246, 267, 497
HinfI GANTC 1 cut(s) 234
HphI GGTGA 2 cut(s) 68, 140
Hpy188I TCNGA 1 cut(s) 153
Hpy188III TCNNGA 1 cut(s) 141
HpyAV CCTTC 1 cut(s) 309
HpyCH4V TGCA 2 cut(s) 186, 456
HpyF10VI GCNNNNNNNGC 1 cut(s) 278
HpyF3I CTNAG 1 cut(s) 72
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 3 cut(s) 246, 267, 497
Kzo9I GATC 3 cut(s) 137, 427, 468
LmnI GCTCC 2 cut(s) 111, 278
LpnPI CCDG 7 cut(s) 39, 59, 63, 102, 154, 360, 396
LweI GCATC 1 cut(s) 387
MaeI CTAG 3 cut(s) 108, 432, 505
MaeIII GTNAC 1 cut(s) 56
MalI GATC 3 cut(s) 139, 429, 470
MboI GATC 3 cut(s) 137, 427, 468
MflI RGATCY 2 cut(s) 137, 427
MhlI GDGCHC 1 cut(s) 116
MluCI AATT 4 cut(s) 123, 190, 256, 304
MlyI GAGTC 1 cut(s) 243
MnlI CCTC 5 cut(s) 128, 220, 383, 414, 455
MseI TTAA 4 cut(s) 248, 303, 339, 498
MspA1I CMGCKG 1 cut(s) 218
MwoI GCNNNNNNNGC 1 cut(s) 278
NdeII GATC 3 cut(s) 137, 427, 468
NlaIII CATG 3 cut(s) 246, 267, 497
NlaIV GGNNCC 1 cut(s) 139
NmuCI GTSAC 1 cut(s) 56
NspI RCATGY 2 cut(s) 246, 497
PleI GAGTC 1 cut(s) 242
PpsI GAGTC 1 cut(s) 242
PshBI ATTAAT 1 cut(s) 303
PspN4I GGNNCC 1 cut(s) 139
PspPI GGNCC 1 cut(s) 401
PsuI RGATCY 2 cut(s) 137, 427
PvuII CAGCTG 1 cut(s) 218
SaqAI TTAA 4 cut(s) 248, 303, 339, 498
Sau3AI GATC 3 cut(s) 137, 427, 468
Sau96I GGNCC 1 cut(s) 401
SchI GAGTC 1 cut(s) 243
SduI GDGCHC 1 cut(s) 116
SetI ASST 4 cut(s) 14, 220, 418, 487
SfaNI GCATC 1 cut(s) 387
SfcI CTRYAG 1 cut(s) 474
SinI GGWCC 1 cut(s) 401
Sse9I AATT 4 cut(s) 123, 190, 256, 304
SspI AATATT 1 cut(s) 328
SspMI CTAG 3 cut(s) 108, 432, 505
StyI CCWWGG 1 cut(s) 171
TasI AATT 4 cut(s) 123, 190, 256, 304
Tru1I TTAA 4 cut(s) 248, 303, 339, 498
Tru9I TTAA 4 cut(s) 248, 303, 339, 498
TscAI CASTG 1 cut(s) 121
TseFI GTSAC 1 cut(s) 56
Tsp45I GTSAC 1 cut(s) 56
TspRI CASTG 1 cut(s) 121
VpaK11BI GGWCC 1 cut(s) 401
VspI ATTAAT 1 cut(s) 303
XapI RAATTY 1 cut(s) 190
XceI RCATGY 2 cut(s) 246, 497
XspI CTAG 3 cut(s) 108, 432, 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.