Rw5G008180

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
8768318 .. 8779672
11355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008180.1

Sequence Viewer

Length: 2982 bp
ATGGCAATTAGAGTTGGAGTTGGTGTTTGGAAAACCATCATGAACCTCAACTTGGTGGTGATACTAGTTCACTGCAGTTTTGGATCAGTCAAAGTTGAAGCTCTTTCGACTCGTCTTCCTGATACTGAAGTGCAAGCCCTACGAGAAATTGCTACACAAATAGGAAAAAAAGACTGGAACTTCAGCGTAGACCCGTGCCTGAATGACACAACCTGGACTACCCCGAAATCTGTTGACACTCGATTCAACAACACTCTCACTTGCAACTGCTCCTTCCCTGATGGTTCATGCCACGTAATCTACATTTTTCTTAAAGGGCAAGATCTTGCTGGTGTACTTCCACCATCTATTGCAAAGTTACCCTACCTTACACAAATCGTTTTCTCATGGAACTTCCTCAGTGGTAATATACCGAGTGAATGGGCTTCTACAAAGTTGGAATATATGTCCCTCAGTGCGAACAACTTATCCGGACCAATCCCTGCCTTCCTAGGAAACATTACCACTCTAACATACGTGAGTCTAGGGTCAAACATGTTTTTCGGAACTGTTCCTCCTGAGCTTGGCAATTTGGTTAACTTGCAGAGACTCATTATTAATGCAAACTATCTCACAGGAGTGTTGCCACCGCATCTCACTAATCTGACCAAATTAACAGAATTGAGGATTAGCAGTAACAACTTCACTGGAATTATTCCAGACTTTTTCCGAAGTTGGAGTCAACTTGAGAAATTAGAGATCCAAGCAAGTGGTTTACAAGGCCCCATTCCATCTAGCATTTCTGTCTTGAGTAATTTAATAGAACTGAGGATCAGCGACTTAAATGGATGGGGTTCAGTATTTCCAAACTTGACTAATATGAAAAGCATGAAAAGATTAATGCTGAGGAGCTGTAATTTATATGGACCTATTCCTGATTTAAAAGCGATGAAAGTAGTAAAAGTCTTAGATCTCAGTTTCAACCAATTGGAAGGAAGTTTTCCTGATCTTGAAGCTATGGCTCTACATCCGGACAATTTGCAGAAATTGTATCTGACAAGCAACTTGCTGAATGGCTCTATTCCAAAATGGATTAAGAGTAAAGATAGCAGCTACCAGATAGATATTTCTTACAATAATTTTTCCGAGGACCCTGAGTCACCTACATGTAGCGAATACCTGAATGATTTCAAAAGCACTTCTACACCAAACATCAACTCATTATCTGGAGCGTGCCTGCAGACAAATCCATGTAAAAAAGATCAGTACGAATTGCATATAAATTGTGGTGGAGCAGCGACCACCATTGGAGGAGTCAAATTTGAAGATGATACAGATATTGGAGGTGGAGCAAAATTTGTTCCAAGACCTAACTGGGGAACCAGTAGCACTGGAGATTTCTGGGATACTAACGTTGCTGATAACTACATAGCAAATAATGTATCGGTACTTGGAATGAAAAACTCTGAGTTGTACACGAATGCACGCCTCACTCCTCTTTCTCTCACTTATTATGCAAACTGCCTAAGAGATGGAAATTATACTGTGAAACTTCATTTTGCGGAGATAGTAATCCGAGGCAATAGATCTTATTACAGTGTTGGAAGACGGATATTTGACGTATATATTCAGGAGAAACTCGTATTGAAGGATTTTGACATTGCAAAGGCAGCAAAAGGTGTTGATAAGGAAGTCATTAAGGAGACAAAGGCAGTTCAGGTTAAGAATAAAACTCTAGAGATTCGGTTTCATTGGTCTGCAAAAGGGACAACAGATACCCCAAGGAGAGGAGTCTATGGTCCCCTTATATCAGCCATTTCTATAAAATCTGAGTTCAAGCATTATTCCAAAACAAAGATGTATATTTTGGTTGGAGTTTCAGTTGGAGCTACGGTTTTGTGCCTTTTCTTCTTAATTTTTGGCATTATTTGGTGGAAAGGCTGTCGGGTGGATAACCAGACATCAAGGGAAGAAGTTCTGAGAGGATTGGATCTGCAAACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTATAAACAAAATTGGAGAAGGTGGTTTTGGTCCCGTCTACAAGGGTACATTATTGGATGGTACTATAATTGCAGTTAAGCAACTATCTTCAAAATCGAAGCAGGGAAATCGTGAATTTGTGAACGAAATAGGCATGATCTCTTGTTTGCAACATCCAAATCTGGTTAGAATGTATGGATGTTGTATTGAAGCAAACCAGTTATTGTTGGTATATGAGTACATGGAGAACAATAGCCTTGCTCGCGCTTTGTACGGTCCAGAGGATGATGTTTTAAACTTGGACTGGTCTACAAGGCAGAAAATATGCCTAGGCATAGCAAAAGGTCTGGCTTATTTGCACGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATCATAATTGCATACTGAAATGCCAACAAAATATAGGATACATGGCACCGGAATATGCTCTATGGGGTTTTTTGACCTTTAAAGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTGCAGGAAAGAACAACACGAAATATCGACCCAATGAGAACATTCAATGTCTTATGGACTGGGCCCTTGTTTTGCAACAAAGAGGGAACTTACTGGAGCTGGTAGATCCGAGGTTGGGGTCCGATTTCAGTAAGAAAGAGGCGATTAGAATGATCAAAGTAGCTCTACTGTGCTCCAATCCAACAGCTGCACTTAGGCCTATCATGTCTGCAGTAGTGAGTATGCTTGAAGGGCGGACCCCCGTGGATGAAGTGGTTCTGGATCCAAGTATCTATGGTGATGAAATGACGAGGTTAAGAGCCTTCGAAGACCAGTTTGATCACAGTACTGCACAAGGGAGCTCCCCAAGTGGAAGTCATGGCCTCATTCGTTCATCAGATGCACCATGGACCGGTTCTTCTGTTACTACTACGTCTTCAGATCTCTATAAATGTAGTCTTTAA

Protein Analysis

993

Amino Acids

110.19

Weight (kDa)

8.04

Isoelectric Point (pI)

29.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 163 - 360 1.6e-11 Leucine-rich repeat region
LRR_8 PF13855 193 - 248 9.4e-07 Leucine rich repeat
Malectin PF11721 418 - 599 2.2e-37 Malectin domain
Pkinase PF00069 678 - 806 3.4e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 679 - 815 6e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2461
AccI GTMKAC 4 cut(s) 189, 2067, 2318, 2508
AccII CGCG 1 cut(s) 2274
AccIII TCCGGA 2 cut(s) 470, 1009
AciI CCGC 3 cut(s) 629, 1541, 2773
AclI AACGTT 1 cut(s) 1392
AclWI GGATC 8 cut(s) 91, 733, 818, 1977, 2021, 2639, 2795, 2808
AcsI RAATTY 3 cut(s) 1298, 1334, 2144
AcuI CTGAAG 3 cut(s) 147, 166, 2940
AfiI CCNNNNNNNGG 6 cut(s) 52, 563, 1355, 1766, 2654, 2930
AflIII ACRYGT 2 cut(s) 534, 1145
AgeI ACCGGT 1 cut(s) 2930
AhdI GACNNNNNGTC 1 cut(s) 1135
AhlI ACTAGT 1 cut(s) 64
AjnI CCWGG 1 cut(s) 212
AjuI GAANNNNNNNTTGG 4 cut(s) 35, 67, 2040, 2072
AleI CACNNNNGTG 1 cut(s) 617
AloI GAACNNNNNNTCC 4 cut(s) 452, 484, 538, 570
Alw21I GWGCWC 2 cut(s) 2714, 2882
Alw26I GTCTC 3 cut(s) 580, 1676, 2394
AlwI GGATC 8 cut(s) 91, 733, 818, 1977, 2021, 2639, 2795, 2808
Aor13HI TCCGGA 2 cut(s) 470, 1009
AoxI GGCC 4 cut(s) 760, 2601, 2735, 2899
ApaI GGGCCC 1 cut(s) 2605
ApeKI GCWGC 5 cut(s) 1089, 1274, 1649, 2009, 2726
ApoI RAATTY 3 cut(s) 1298, 1334, 2144
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
AseI ATTAAT 2 cut(s) 597, 878
AsiGI ACCGGT 1 cut(s) 2930
Asp700I GAANNNNTTC 3 cut(s) 1166, 1953, 2793
AspA2I CCTAGG 2 cut(s) 490, 2338
AspLEI GCGC 1 cut(s) 2276
AsuHPI GGTGA 4 cut(s) 70, 1131, 1981, 2828
AsuII TTCGAA 1 cut(s) 2844
AvaII GGWCC 9 cut(s) 473, 905, 1129, 1778, 2060, 2285, 2658, 2775, 2928
AvrII CCTAGG 2 cut(s) 490, 2338
BaeGI GKGCMC 1 cut(s) 2605
BaeI ACNNNNGTAYC 4 cut(s) 114, 147, 1377, 1410
BamHI GGATCC 1 cut(s) 2800
BanI GGYRCC 1 cut(s) 2461
BanII GRGCYC 2 cut(s) 2605, 2882
BauI CACGAG 1 cut(s) 2369
BbsI GAAGAC 4 cut(s) 107, 1591, 2853, 2946
Bbv12I GWGCWC 2 cut(s) 2714, 2882
BbvCI CCTCAGC 1 cut(s) 884
BbvI GCAGC 5 cut(s) 1101, 1286, 1661, 1996, 2713
BccI CCATC 7 cut(s) 44, 275, 352, 778, 822, 1505, 2081
BcgI CGANNNNNNTGC 2 cut(s) 2120, 2154
BciT130I CCWGG 1 cut(s) 214
BciVI GTATCC 2 cut(s) 1378, 2447
BclI TGATCA 2 cut(s) 2691, 2857
BcoDI GTCTC 3 cut(s) 580, 1676, 2394
BcuI ACTAGT 1 cut(s) 64
BfaI CTAG 6 cut(s) 65, 491, 524, 774, 1715, 2339
BfmI CTRYAG 4 cut(s) 73, 1217, 2509, 2748
BfuI GTATCC 2 cut(s) 1378, 2447
BglII AGATCT 4 cut(s) 322, 949, 1565, 2959
BisI GCNGC 5 cut(s) 1090, 1275, 1650, 2010, 2727
BlnI CCTAGG 2 cut(s) 490, 2338
BlsI GCNGC 5 cut(s) 1091, 1276, 1651, 2011, 2728
BmcAI AGTACT 1 cut(s) 2866
Bme1390I CCNGG 1 cut(s) 214
Bme18I GGWCC 9 cut(s) 473, 905, 1129, 1778, 2060, 2285, 2658, 2775, 2928
BmeRI GACNNNNNGTC 1 cut(s) 1135
BmrFI CCNGG 1 cut(s) 214
BmrI ACTGGG 2 cut(s) 1363, 2608
BmsI GCATC 2 cut(s) 640, 2908
BmuI ACTGGG 2 cut(s) 1363, 2608
BpiI GAAGAC 4 cut(s) 107, 1591, 2853, 2946
BpmI CTGGAG 3 cut(s) 1227, 1392, 2654
Bpu10I CCTNAGC 2 cut(s) 558, 884
Bpu14I TTCGAA 1 cut(s) 2844
BpuEI CTTGAG 3 cut(s) 746, 808, 2014
BsaAI YACGTR 2 cut(s) 295, 517
BsaBI GATNNNNATC 1 cut(s) 1550
BsaJI CCNNGG 8 cut(s) 490, 1125, 1555, 1760, 2338, 2648, 2781, 2924
BsaWI WCCGGW 4 cut(s) 470, 1009, 2464, 2930
BsaXI ACNNNNNCTCC 8 cut(s) 9, 39, 538, 568, 1845, 1857, 1875, 1887
Bsc4I CCNNNNNNNGG 6 cut(s) 52, 563, 1355, 1766, 2654, 2930
Bse118I RCCGGY 1 cut(s) 2930
Bse3DI GCAATG 1 cut(s) 1638
Bse8I GATNNNNATC 1 cut(s) 1550
BseAI TCCGGA 2 cut(s) 470, 1009
BseBI CCWGG 1 cut(s) 214
BseDI CCNNGG 8 cut(s) 490, 1125, 1555, 1760, 2338, 2648, 2781, 2924
BseGI GGATG 7 cut(s) 833, 1006, 2092, 2182, 2213, 2299, 2791
BseJI GATNNNNATC 1 cut(s) 1550
BseLI CCNNNNNNNGG 6 cut(s) 52, 563, 1355, 1766, 2654, 2930
BseMI GCAATG 1 cut(s) 1638
BseRI GAGGAG 4 cut(s) 901, 1305, 1464, 1782
BseSI GKGCMC 1 cut(s) 2605
BseXI GCAGC 5 cut(s) 1101, 1286, 1661, 1996, 2713
BsgI GTGCAG 2 cut(s) 2712, 2853
Bsh1236I CGCG 1 cut(s) 2274
BshFI GGCC 4 cut(s) 762, 2603, 2737, 2901
BshNI GGYRCC 1 cut(s) 2461
BshTI ACCGGT 1 cut(s) 2930
BsiHKAI GWGCWC 2 cut(s) 2714, 2882
BsiSI CCGG 4 cut(s) 471, 1010, 2465, 2931
BslFI GGGAC 4 cut(s) 433, 1759, 1764, 2046
BslI CCNNNNNNNGG 6 cut(s) 52, 563, 1355, 1766, 2654, 2930
BsmAI GTCTC 3 cut(s) 580, 1676, 2394
BsmFI GGGAC 4 cut(s) 433, 1759, 1764, 2046
BsmI GAATGC 1 cut(s) 1465
BsnI GGCC 4 cut(s) 762, 2603, 2737, 2901
Bsp119I TTCGAA 1 cut(s) 2844
Bsp120I GGGCCC 1 cut(s) 2601
Bsp1286I GDGCHC 3 cut(s) 2605, 2714, 2882
Bsp13I TCCGGA 2 cut(s) 470, 1009
Bsp1407I TGTACA 2 cut(s) 1452, 2392
Bsp19I CCATGG 1 cut(s) 2924
BspACI CCGC 3 cut(s) 629, 1541, 2773
BspANI GGCC 4 cut(s) 762, 2603, 2737, 2901
BspEI TCCGGA 2 cut(s) 470, 1009
BspFNI CGCG 1 cut(s) 2274
BspHI TCATGA 1 cut(s) 39
BspMAI CTGCAG 3 cut(s) 77, 1221, 2752
BspPI GGATC 8 cut(s) 91, 733, 818, 1977, 2021, 2639, 2795, 2808
BspT104I TTCGAA 1 cut(s) 2844
BspT107I GGYRCC 1 cut(s) 2461
BsrDI GCAATG 1 cut(s) 1638
BsrFI RCCGGY 1 cut(s) 2930
BsrGI TGTACA 2 cut(s) 1452, 2392
BssAI RCCGGY 1 cut(s) 2930
BssECI CCNNGG 8 cut(s) 490, 1125, 1555, 1760, 2338, 2648, 2781, 2924
BssSI CACGAG 1 cut(s) 2369
BssT1I CCWWGG 4 cut(s) 490, 1760, 2338, 2924
Bst2BI CACGAG 1 cut(s) 2369
Bst2UI CCWGG 1 cut(s) 214
Bst4CI ACNGT 9 cut(s) 550, 1525, 1577, 1873, 2285, 2513, 2539, 2709, 2864
BstAUI TGTACA 2 cut(s) 1452, 2392
BstBAI YACGTR 2 cut(s) 295, 517
BstBI TTCGAA 1 cut(s) 2844
BstC8I GCNNGC 5 cut(s) 135, 1213, 1217, 1465, 2272
BstDSI CCRYGG 2 cut(s) 2781, 2924
BstF5I GGATG 7 cut(s) 833, 1006, 2092, 2182, 2213, 2299, 2791
BstFNI CGCG 1 cut(s) 2274
BstHHI GCGC 1 cut(s) 2276
BstMAI GTCTC 3 cut(s) 580, 1676, 2394
BstMWI GCNNNNNNNGC 3 cut(s) 1649, 2271, 2770
BstNI CCWGG 1 cut(s) 214
BstNSI RCATGY 2 cut(s) 538, 1149
BstSCI CCNGG 1 cut(s) 212
BstSFI CTRYAG 4 cut(s) 73, 1217, 2509, 2748
BstSLI GKGCMC 1 cut(s) 2605
BstUI CGCG 1 cut(s) 2274
BstV1I GCAGC 5 cut(s) 1101, 1286, 1661, 1996, 2713
BstV2I GAAGAC 4 cut(s) 107, 1591, 2853, 2946
BstX2I RGATCY 8 cut(s) 322, 738, 949, 1565, 1969, 2644, 2800, 2959
BstXI CCANNNNNNTGG 1 cut(s) 749
BstYI RGATCY 8 cut(s) 322, 738, 949, 1565, 1969, 2644, 2800, 2959
BsuI GTATCC 2 cut(s) 1378, 2447
BsuRI GGCC 4 cut(s) 762, 2603, 2737, 2901
BtgI CCRYGG 2 cut(s) 2781, 2924
BtgZI GCGATG 1 cut(s) 941
BtsCI GGATG 7 cut(s) 833, 1006, 2092, 2182, 2213, 2299, 2791
BtsI GCAGTG 2 cut(s) 70, 2388
BtsIMutI CAGTG 7 cut(s) 70, 406, 460, 684, 1368, 1582, 2388
Cac8I GCNNGC 5 cut(s) 135, 1213, 1217, 1465, 2272
CciI TCATGA 1 cut(s) 39
CfoI GCGC 1 cut(s) 2276
Cfr10I RCCGGY 1 cut(s) 2930
CspAI ACCGGT 1 cut(s) 2930
DraI TTTAAA 3 cut(s) 921, 2304, 2497
DriI GACNNNNNGTC 1 cut(s) 1135
Eam1105I GACNNNNNGTC 1 cut(s) 1135
EciI GGCGGA 1 cut(s) 2788
Ecl136II GAGCTC 1 cut(s) 2880
Eco130I CCWWGG 4 cut(s) 490, 1760, 2338, 2924
Eco147I AGGCCT 1 cut(s) 2737
Eco24I GRGCYC 2 cut(s) 2605, 2882
Eco47I GGWCC 9 cut(s) 473, 905, 1129, 1778, 2060, 2285, 2658, 2775, 2928
Eco53kI GAGCTC 1 cut(s) 2880
Eco57I CTGAAG 3 cut(s) 147, 166, 2940
EcoICRI GAGCTC 1 cut(s) 2880
EcoO109I RGGNCCY 3 cut(s) 761, 1129, 2602
EcoRII CCWGG 1 cut(s) 212
EcoT14I CCWWGG 4 cut(s) 490, 1760, 2338, 2924
EcoT38I GRGCYC 2 cut(s) 2605, 2882
ErhI CCWWGG 4 cut(s) 490, 1760, 2338, 2924
FaqI GGGAC 4 cut(s) 433, 1759, 1764, 2046
FbaI TGATCA 2 cut(s) 2691, 2857
FblI GTMKAC 4 cut(s) 189, 2067, 2318, 2508
Fnu4HI GCNGC 5 cut(s) 1090, 1275, 1650, 2010, 2727
FokI GGATG 7 cut(s) 840, 993, 2099, 2169, 2220, 2306, 2798
FriOI GRGCYC 2 cut(s) 2605, 2882
Fsp4HI GCNGC 5 cut(s) 1090, 1275, 1650, 2010, 2727
FspBI CTAG 6 cut(s) 65, 491, 524, 774, 1715, 2339
GlaI GCGC 1 cut(s) 2275
GluI GCNGC 5 cut(s) 1090, 1275, 1650, 2010, 2727
GsuI CTGGAG 3 cut(s) 1227, 1392, 2654
HaeIII GGCC 4 cut(s) 762, 2603, 2737, 2901
HapII CCGG 4 cut(s) 471, 1010, 2465, 2931
HhaI GCGC 1 cut(s) 2276
Hin6I GCGC 1 cut(s) 2274
HinP1I GCGC 1 cut(s) 2274
HincII GTYRAC 3 cut(s) 235, 577, 722
HindII GTYRAC 3 cut(s) 235, 577, 722
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 4 cut(s) 471, 1010, 2465, 2931
HphI GGTGA 4 cut(s) 70, 1131, 1981, 2828
HpyAV CCTTC 8 cut(s) 283, 496, 965, 1621, 2042, 2380, 2762, 2851
HpyCH4III ACNGT 9 cut(s) 550, 1525, 1577, 1873, 2285, 2513, 2539, 2709, 2864
HpyCH4IV ACGT 5 cut(s) 294, 516, 1392, 1599, 2951
HpyF10VI GCNNNNNNNGC 3 cut(s) 1649, 2271, 2770
HpySE526I ACGT 5 cut(s) 294, 516, 1392, 1599, 2951
HspAI GCGC 1 cut(s) 2274
Kpn2I TCCGGA 2 cut(s) 470, 1009
Ksp22I TGATCA 2 cut(s) 2691, 2857
KspAI GTTAAC 1 cut(s) 577
Lsp1109I GCAGC 5 cut(s) 1101, 1286, 1661, 1996, 2713
LweI GCATC 2 cut(s) 640, 2908
MaeI CTAG 6 cut(s) 65, 491, 524, 774, 1715, 2339
MaeII ACGT 5 cut(s) 294, 516, 1392, 1599, 2951
MaeIII GTNAC 4 cut(s) 357, 674, 1137, 2941
MboII GAAGA 9 cut(s) 107, 1316, 1596, 1879, 1961, 2109, 2858, 2928, 2946
MfeI CAATTG 1 cut(s) 965
MflI RGATCY 8 cut(s) 322, 738, 949, 1565, 1969, 2644, 2800, 2959
MhlI GDGCHC 3 cut(s) 2605, 2714, 2882
MlyI GAGTC 7 cut(s) 103, 529, 582, 727, 1145, 1302, 1779
MmeI TCCRAC 6 cut(s) 417, 695, 1561, 1831, 1843, 2744
MroI TCCGGA 2 cut(s) 470, 1009
MroXI GAANNNNTTC 3 cut(s) 1166, 1953, 2793
MslI CAYNNNNRTG 2 cut(s) 617, 1144
MspA1I CMGCKG 1 cut(s) 2726
MspI CCGG 4 cut(s) 471, 1010, 2465, 2931
MspR9I CCNGG 1 cut(s) 214
MunI CAATTG 1 cut(s) 965
Mva1269I GAATGC 1 cut(s) 1465
MvaI CCWGG 1 cut(s) 214
MvnI CGCG 1 cut(s) 2274
MwoI GCNNNNNNNGC 3 cut(s) 1649, 2271, 2770
NcoI CCATGG 1 cut(s) 2924
NmuCI GTSAC 1 cut(s) 1137
NspI RCATGY 2 cut(s) 538, 1149
NspV TTCGAA 1 cut(s) 2844
OliI CACNNNNGTG 1 cut(s) 617
PagI TCATGA 1 cut(s) 39
PceI AGGCCT 1 cut(s) 2737
PciI ACATGT 2 cut(s) 534, 1145
PctI GAATGC 1 cut(s) 1465
PdmI GAANNNNTTC 3 cut(s) 1166, 1953, 2793
PfeI GAWTC 4 cut(s) 243, 1720, 2375, 2416
PinAI ACCGGT 1 cut(s) 2930
PkrI GCNGC 5 cut(s) 1091, 1276, 1651, 2011, 2728
PleI GAGTC 7 cut(s) 103, 528, 582, 726, 1144, 1301, 1778
PpsI GAGTC 7 cut(s) 103, 528, 582, 726, 1144, 1301, 1778
Ppu21I YACGTR 2 cut(s) 295, 517
PpuMI RGGWCCY 1 cut(s) 1129
PscI ACATGT 2 cut(s) 534, 1145
PshBI ATTAAT 2 cut(s) 597, 878
Psp124BI GAGCTC 1 cut(s) 2882
Psp1406I AACGTT 1 cut(s) 1392
Psp5II RGGWCCY 1 cut(s) 1129
Psp6I CCWGG 1 cut(s) 212
PspGI CCWGG 1 cut(s) 212
PspOMI GGGCCC 1 cut(s) 2601
PspPPI RGGWCCY 1 cut(s) 1129
PstI CTGCAG 3 cut(s) 77, 1221, 2752
PsuI RGATCY 8 cut(s) 322, 738, 949, 1565, 1969, 2644, 2800, 2959
PvuII CAGCTG 1 cut(s) 2726
RseI CAYNNNNRTG 2 cut(s) 617, 1144
SacI GAGCTC 1 cut(s) 2882
SatI GCNGC 5 cut(s) 1090, 1275, 1650, 2010, 2727
ScaI AGTACT 1 cut(s) 2866
SchI GAGTC 7 cut(s) 103, 529, 582, 727, 1145, 1302, 1779
ScrFI CCNGG 1 cut(s) 214
SduI GDGCHC 3 cut(s) 2605, 2714, 2882
SfaNI GCATC 2 cut(s) 640, 2908
SfcI CTRYAG 4 cut(s) 73, 1217, 2509, 2748
SfuI TTCGAA 1 cut(s) 2844
SinI GGWCC 9 cut(s) 473, 905, 1129, 1778, 2060, 2285, 2658, 2775, 2928
SmiMI CAYNNNNRTG 2 cut(s) 617, 1144
SmlI CTYRAG 3 cut(s) 725, 787, 1993
SmoI CTYRAG 3 cut(s) 725, 787, 1993
SpeI ACTAGT 1 cut(s) 64
SseBI AGGCCT 1 cut(s) 2737
SsiI CCGC 3 cut(s) 629, 1541, 2773
SspMI CTAG 6 cut(s) 65, 491, 524, 774, 1715, 2339
SstI GAGCTC 1 cut(s) 2882
StuI AGGCCT 1 cut(s) 2737
StyD4I CCNGG 1 cut(s) 212
StyI CCWWGG 4 cut(s) 490, 1760, 2338, 2924
TaaI ACNGT 9 cut(s) 550, 1525, 1577, 1873, 2285, 2513, 2539, 2709, 2864
TaiI ACGT 5 cut(s) 297, 519, 1395, 1602, 2954
TaqI TCGA 5 cut(s) 107, 241, 2126, 2566, 2844
TatI WGTACW 5 cut(s) 334, 1452, 2247, 2392, 2864
TfiI GAWTC 4 cut(s) 243, 1720, 2375, 2416
TscAI CASTG 7 cut(s) 77, 406, 460, 691, 1375, 1582, 2388
TseFI GTSAC 1 cut(s) 1137
TseI GCWGC 5 cut(s) 1089, 1274, 1649, 2009, 2726
Tsp45I GTSAC 1 cut(s) 1137
TspGWI ACGGA 1 cut(s) 1603
TspRI CASTG 7 cut(s) 77, 406, 460, 691, 1375, 1582, 2388
VpaK11BI GGWCC 9 cut(s) 473, 905, 1129, 1778, 2060, 2285, 2658, 2775, 2928
VspI ATTAAT 2 cut(s) 597, 878
XapI RAATTY 3 cut(s) 1298, 1334, 2144
XbaI TCTAGA 1 cut(s) 1714
XceI RCATGY 2 cut(s) 538, 1149
XcmI CCANNNNNNNNNTGG 1 cut(s) 1350
XmaJI CCTAGG 2 cut(s) 490, 2338
XmiI GTMKAC 4 cut(s) 189, 2067, 2318, 2508
XmnI GAANNNNTTC 3 cut(s) 1166, 1953, 2793
XspI CTAG 6 cut(s) 65, 491, 524, 774, 1715, 2339
ZrmI AGTACT 1 cut(s) 2866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.