Auxin transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 464 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 38 |
| AccI | GTMKAC | 1 cut(s) | 507 |
| AccII | CGCG | 1 cut(s) | 144 |
| AciI | CCGC | 7 cut(s) | 63, 85, 142, 196, 526, 556, 834 |
| AclWI | GGATC | 1 cut(s) | 196 |
| AcsI | RAATTY | 4 cut(s) | 18, 299, 327, 445 |
| AfaI | GTAC | 3 cut(s) | 698, 791, 803 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 38 |
| AgsI | TTSAA | 3 cut(s) | 232, 841, 934 |
| AluBI | AGCT | 4 cut(s) | 353, 896, 970, 1011 |
| AluI | AGCT | 4 cut(s) | 353, 896, 970, 1011 |
| Alw21I | GWGCWC | 2 cut(s) | 517, 972 |
| Alw26I | GTCTC | 1 cut(s) | 541 |
| AlwI | GGATC | 1 cut(s) | 196 |
| AoxI | GGCC | 2 cut(s) | 41, 169 |
| ApaI | GGGCCC | 1 cut(s) | 173 |
| ApoI | RAATTY | 4 cut(s) | 18, 299, 327, 445 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 202, 234 |
| AspS9I | GGNCC | 6 cut(s) | 41, 169, 170, 267, 394, 779 |
| AsuC2I | CCSGG | 2 cut(s) | 158, 306 |
| AsuHPI | GGTGA | 1 cut(s) | 509 |
| AsuII | TTCGAA | 1 cut(s) | 208 |
| AvaII | GGWCC | 3 cut(s) | 267, 394, 779 |
| BaeGI | GKGCMC | 1 cut(s) | 173 |
| BanI | GGYRCC | 1 cut(s) | 464 |
| BanII | GRGCYC | 2 cut(s) | 173, 972 |
| BbsI | GAAGAC | 3 cut(s) | 70, 389, 773 |
| Bbv12I | GWGCWC | 2 cut(s) | 517, 972 |
| BbvCI | CCTCAGC | 1 cut(s) | 615 |
| BccI | CCATC | 3 cut(s) | 455, 815, 940 |
| BceAI | ACGGC | 2 cut(s) | 76, 230 |
| BcnI | CCSGG | 2 cut(s) | 158, 306 |
| BcoDI | GTCTC | 1 cut(s) | 541 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BfmI | CTRYAG | 1 cut(s) | 603 |
| BisI | GCNGC | 2 cut(s) | 142, 557 |
| BlsI | GCNGC | 2 cut(s) | 143, 558 |
| Bme1390I | CCNGG | 2 cut(s) | 158, 306 |
| Bme18I | GGWCC | 3 cut(s) | 267, 394, 779 |
| BmgT120I | GGNCC | 6 cut(s) | 41, 169, 170, 267, 394, 779 |
| BmiI | GGNNCC | 5 cut(s) | 170, 171, 466, 781, 901 |
| BmrFI | CCNGG | 2 cut(s) | 158, 306 |
| BmrI | ACTGGG | 1 cut(s) | 726 |
| BmsI | GCATC | 1 cut(s) | 927 |
| BmuI | ACTGGG | 1 cut(s) | 726 |
| BpiI | GAAGAC | 3 cut(s) | 70, 389, 773 |
| BpmI | CTGGAG | 1 cut(s) | 662 |
| Bpu10I | CCTNAGC | 1 cut(s) | 615 |
| Bpu14I | TTCGAA | 1 cut(s) | 208 |
| BpuEI | CTTGAG | 2 cut(s) | 333, 926 |
| BpuMI | CCSGG | 2 cut(s) | 158, 306 |
| BsaJI | CCNNGG | 3 cut(s) | 58, 304, 859 |
| BsaWI | WCCGGW | 1 cut(s) | 358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 57, 87 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 38 |
| Bse118I | RCCGGY | 2 cut(s) | 269, 451 |
| Bse1I | ACTGG | 4 cut(s) | 71, 595, 645, 721 |
| Bse3DI | GCAATG | 1 cut(s) | 766 |
| BseDI | CCNNGG | 3 cut(s) | 58, 304, 859 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseMI | GCAATG | 1 cut(s) | 766 |
| BseMII | CTCAG | 2 cut(s) | 90, 606 |
| BseNI | ACTGG | 4 cut(s) | 71, 595, 645, 721 |
| BseRI | GAGGAG | 3 cut(s) | 117, 632, 1002 |
| BseSI | GKGCMC | 1 cut(s) | 173 |
| BseYI | CCCAGC | 1 cut(s) | 878 |
| Bsh1236I | CGCG | 1 cut(s) | 144 |
| BshFI | GGCC | 2 cut(s) | 43, 171 |
| BshNI | GGYRCC | 1 cut(s) | 464 |
| BsiHKAI | GWGCWC | 2 cut(s) | 517, 972 |
| BsiSI | CCGG | 5 cut(s) | 157, 270, 306, 359, 452 |
| BslFI | GGGAC | 1 cut(s) | 131 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BsmAI | GTCTC | 1 cut(s) | 541 |
| BsmFI | GGGAC | 1 cut(s) | 131 |
| BsnI | GGCC | 2 cut(s) | 43, 171 |
| Bsp119I | TTCGAA | 1 cut(s) | 208 |
| Bsp120I | GGGCCC | 1 cut(s) | 169 |
| Bsp1286I | GDGCHC | 3 cut(s) | 173, 517, 972 |
| Bsp143I | GATC | 3 cut(s) | 24, 188, 868 |
| BspACI | CCGC | 7 cut(s) | 63, 85, 142, 196, 526, 556, 834 |
| BspANI | GGCC | 2 cut(s) | 43, 171 |
| BspCNI | CTCAG | 2 cut(s) | 91, 607 |
| BspFNI | CGCG | 1 cut(s) | 144 |
| BspLI | GGNNCC | 5 cut(s) | 170, 171, 466, 781, 901 |
| BspMAI | CTGCAG | 1 cut(s) | 607 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BspT104I | TTCGAA | 1 cut(s) | 208 |
| BspT107I | GGYRCC | 1 cut(s) | 464 |
| BsrDI | GCAATG | 1 cut(s) | 766 |
| BsrFI | RCCGGY | 2 cut(s) | 269, 451 |
| BsrI | ACTGG | 4 cut(s) | 71, 595, 645, 721 |
| BssAI | RCCGGY | 2 cut(s) | 269, 451 |
| BssECI | CCNNGG | 3 cut(s) | 58, 304, 859 |
| BssMI | GATC | 3 cut(s) | 24, 188, 868 |
| BssT1I | CCWWGG | 1 cut(s) | 859 |
| Bst4CI | ACNGT | 2 cut(s) | 313, 512 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 611 |
| BstBI | TTCGAA | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 2 cut(s) | 99, 615 |
| BstDSI | CCRYGG | 1 cut(s) | 58 |
| BstFNI | CGCG | 1 cut(s) | 144 |
| BstKTI | GATC | 3 cut(s) | 27, 191, 871 |
| BstMAI | GTCTC | 1 cut(s) | 541 |
| BstMBI | GATC | 3 cut(s) | 24, 188, 868 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 242, 611 |
| BstSCI | CCNGG | 2 cut(s) | 156, 304 |
| BstSFI | CTRYAG | 1 cut(s) | 603 |
| BstSLI | GKGCMC | 1 cut(s) | 173 |
| BstUI | CGCG | 1 cut(s) | 144 |
| BstV2I | GAAGAC | 3 cut(s) | 70, 389, 773 |
| BstX2I | RGATCY | 1 cut(s) | 188 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 896 |
| BstYI | RGATCY | 1 cut(s) | 188 |
| BsuRI | GGCC | 2 cut(s) | 43, 171 |
| BtgI | CCRYGG | 1 cut(s) | 58 |
| BtsI | GCAGTG | 1 cut(s) | 917 |
| BtsIMutI | CAGTG | 6 cut(s) | 78, 318, 499, 588, 714, 917 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| Cfr10I | RCCGGY | 2 cut(s) | 269, 451 |
| Cfr13I | GGNCC | 6 cut(s) | 41, 169, 170, 267, 394, 779 |
| CseI | GACGC | 1 cut(s) | 133 |
| Csp6I | GTAC | 3 cut(s) | 697, 790, 802 |
| CviAII | CATG | 3 cut(s) | 438, 754, 805 |
| CviQI | GTAC | 3 cut(s) | 697, 790, 802 |
| DdeI | CTNAG | 2 cut(s) | 99, 615 |
| DpnI | GATC | 3 cut(s) | 26, 190, 870 |
| DpnII | GATC | 3 cut(s) | 24, 188, 868 |
| EciI | GGCGGA | 1 cut(s) | 78 |
| Ecl136II | GAGCTC | 1 cut(s) | 970 |
| Eco130I | CCWWGG | 1 cut(s) | 859 |
| Eco24I | GRGCYC | 2 cut(s) | 173, 972 |
| Eco32I | GATATC | 2 cut(s) | 345, 742 |
| Eco47I | GGWCC | 3 cut(s) | 267, 394, 779 |
| Eco53kI | GAGCTC | 1 cut(s) | 970 |
| EcoICRI | GAGCTC | 1 cut(s) | 970 |
| EcoO109I | RGGNCCY | 1 cut(s) | 169 |
| EcoRI | GAATTC | 2 cut(s) | 18, 299 |
| EcoRV | GATATC | 2 cut(s) | 345, 742 |
| EcoT14I | CCWWGG | 1 cut(s) | 859 |
| EcoT38I | GRGCYC | 2 cut(s) | 173, 972 |
| ErhI | CCWWGG | 1 cut(s) | 859 |
| FaeI | CATG | 3 cut(s) | 441, 757, 808 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 225, 257 |
| FaqI | GGGAC | 1 cut(s) | 131 |
| FatI | CATG | 3 cut(s) | 437, 753, 804 |
| FauNDI | CATATG | 1 cut(s) | 685 |
| FblI | GTMKAC | 1 cut(s) | 507 |
| Fnu4HI | GCNGC | 2 cut(s) | 142, 557 |
| FriOI | GRGCYC | 2 cut(s) | 173, 972 |
| Fsp4HI | GCNGC | 2 cut(s) | 142, 557 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GluI | GCNGC | 2 cut(s) | 142, 557 |
| GsaI | CCCAGC | 1 cut(s) | 882 |
| GsuI | CTGGAG | 1 cut(s) | 662 |
| HaeIII | GGCC | 2 cut(s) | 43, 171 |
| HapII | CCGG | 5 cut(s) | 157, 270, 306, 359, 452 |
| HgaI | GACGC | 1 cut(s) | 133 |
| Hin1II | CATG | 3 cut(s) | 441, 757, 808 |
| HindIII | AAGCTT | 1 cut(s) | 1009 |
| HinfI | GANTC | 2 cut(s) | 103, 256 |
| HpaII | CCGG | 5 cut(s) | 157, 270, 306, 359, 452 |
| HphI | GGTGA | 1 cut(s) | 509 |
| Hpy166II | GTNNAC | 4 cut(s) | 394, 508, 714, 790 |
| Hpy188III | TCNNGA | 5 cut(s) | 265, 538, 676, 934, 943 |
| Hpy8I | GTNNAC | 4 cut(s) | 394, 508, 714, 790 |
| HpyCH4III | ACNGT | 2 cut(s) | 313, 512 |
| HpyCH4V | TGCA | 3 cut(s) | 605, 683, 922 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 242, 611 |
| HpyF3I | CTNAG | 2 cut(s) | 99, 615 |
| Hsp92II | CATG | 3 cut(s) | 441, 757, 808 |
| Kzo9I | GATC | 3 cut(s) | 24, 188, 868 |
| LweI | GCATC | 1 cut(s) | 927 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MalI | GATC | 3 cut(s) | 26, 190, 870 |
| MboI | GATC | 3 cut(s) | 24, 188, 868 |
| MboII | GAAGA | 6 cut(s) | 19, 70, 394, 778, 964, 989 |
| MfeI | CAATTG | 2 cut(s) | 33, 413 |
| MflI | RGATCY | 1 cut(s) | 188 |
| MhlI | GDGCHC | 3 cut(s) | 173, 517, 972 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MnlI | CCTC | 8 cut(s) | 8, 117, 135, 138, 196, 610, 730, 980 |
| MseI | TTAA | 2 cut(s) | 318, 486 |
| MspI | CCGG | 5 cut(s) | 157, 270, 306, 359, 452 |
| MspR9I | CCNGG | 2 cut(s) | 158, 306 |
| MunI | CAATTG | 2 cut(s) | 33, 413 |
| MvnI | CGCG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 242, 611 |
| NciI | CCSGG | 2 cut(s) | 158, 306 |
| NdeI | CATATG | 1 cut(s) | 685 |
| NdeII | GATC | 3 cut(s) | 24, 188, 868 |
| NlaIII | CATG | 3 cut(s) | 441, 757, 808 |
| NlaIV | GGNNCC | 5 cut(s) | 170, 171, 466, 781, 901 |
| NspV | TTCGAA | 1 cut(s) | 208 |
| PfeI | GAWTC | 1 cut(s) | 103 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 38 |
| PkrI | GCNGC | 2 cut(s) | 143, 558 |
| PleI | GAGTC | 1 cut(s) | 264 |
| PpsI | GAGTC | 1 cut(s) | 264 |
| Psp124BI | GAGCTC | 1 cut(s) | 972 |
| PspFI | CCCAGC | 1 cut(s) | 878 |
| PspN4I | GGNNCC | 5 cut(s) | 170, 171, 466, 781, 901 |
| PspOMI | GGGCCC | 1 cut(s) | 169 |
| PspPI | GGNCC | 6 cut(s) | 41, 169, 170, 267, 394, 779 |
| PstI | CTGCAG | 1 cut(s) | 607 |
| PsuI | RGATCY | 1 cut(s) | 188 |
| RsaI | GTAC | 3 cut(s) | 698, 791, 803 |
| RsaNI | GTAC | 3 cut(s) | 697, 790, 802 |
| SacI | GAGCTC | 1 cut(s) | 972 |
| SaqAI | TTAA | 2 cut(s) | 318, 486 |
| SatI | GCNGC | 2 cut(s) | 142, 557 |
| Sau3AI | GATC | 3 cut(s) | 24, 188, 868 |
| Sau96I | GGNCC | 6 cut(s) | 41, 169, 170, 267, 394, 779 |
| SchI | GAGTC | 1 cut(s) | 265 |
| ScrFI | CCNGG | 2 cut(s) | 158, 306 |
| SduI | GDGCHC | 3 cut(s) | 173, 517, 972 |
| SetI | ASST | 9 cut(s) | 94, 120, 207, 355, 632, 898, 929, 972, 1013 |
| SfaNI | GCATC | 1 cut(s) | 927 |
| SfcI | CTRYAG | 1 cut(s) | 603 |
| SfuI | TTCGAA | 1 cut(s) | 208 |
| SinI | GGWCC | 3 cut(s) | 267, 394, 779 |
| SmlI | CTYRAG | 2 cut(s) | 348, 941 |
| SmoI | CTYRAG | 2 cut(s) | 348, 941 |
| SsiI | CCGC | 7 cut(s) | 63, 85, 142, 196, 526, 556, 834 |
| SspMI | CTAG | 1 cut(s) | 285 |
| SstI | GAGCTC | 1 cut(s) | 972 |
| StyD4I | CCNGG | 2 cut(s) | 156, 304 |
| StyI | CCWWGG | 1 cut(s) | 859 |
| TaaI | ACNGT | 2 cut(s) | 313, 512 |
| TaqI | TCGA | 4 cut(s) | 201, 208, 291, 539 |
| TatI | WGTACW | 1 cut(s) | 801 |
| TauI | GCSGC | 2 cut(s) | 144, 559 |
| TfiI | GAWTC | 1 cut(s) | 103 |
| Tru1I | TTAA | 2 cut(s) | 318, 486 |
| Tru9I | TTAA | 2 cut(s) | 318, 486 |
| TscAI | CASTG | 6 cut(s) | 78, 318, 499, 595, 721, 924 |
| TspDTI | ATGAA | 3 cut(s) | 395, 742, 824 |
| TspRI | CASTG | 6 cut(s) | 78, 318, 499, 595, 721, 924 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 38 |
| VpaK11BI | GGWCC | 3 cut(s) | 267, 394, 779 |
| XapI | RAATTY | 4 cut(s) | 18, 299, 327, 445 |
| XmiI | GTMKAC | 1 cut(s) | 507 |
| XspI | CTAG | 1 cut(s) | 285 |