pycom10g22770

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
25077306 .. 25077761
456 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g22770.1

Sequence Viewer

Length: 456 bp
ATGCAGCAATGTAAAACAACAATCAAGACATTTCTTGTGGAAGTTTTTTTCATTTTTTTGTTCATCTCCAGGGTCTTTTGTATATTGCAGGCTTTTGTTTTACAACAGACTGGAAATCTGATGGAGCTGGTCGATCCAAAGTTGGGCTCTGACTTTAACAAGGAACAGGCAATGAGAATGATTAAGGTCGCTATACTATGCACTAACCCAGCACTGGCATTAAGACCTACAATGTCTGCAGTAGTGAGCATGCTTGAAGGTCGAGCTATAGTTCATGAACTGAACATAAATCCATGTATTTACGGTGATGAAATGAGGTTTGCGTCCTTTAGAGACGAGTCTAACAGTCGGAGTGCGTGTGAGACAGAAAGCTTAATTTATTTATCTGATCCAACGGCAATTCCCTCTTCCCACTCGTCTGTCCAAGATTTGTATCCGGTAAATTTTGATTCTTGA

Protein Analysis

152

Amino Acids

17.0

Weight (kDa)

5.1

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 128, 383
AcsI RAATTY 1 cut(s) 442
AfiI CCNNNNNNNGG 2 cut(s) 143, 214
AgsI TTSAA 1 cut(s) 257
AjnI CCWGG 1 cut(s) 68
AluBI AGCT 3 cut(s) 127, 266, 372
AluI AGCT 3 cut(s) 127, 266, 372
Alw26I GTCTC 2 cut(s) 327, 356
AlwI GGATC 2 cut(s) 128, 383
ApeKI GCWGC 1 cut(s) 4
ApoI RAATTY 1 cut(s) 442
AsuHPI GGTGA 1 cut(s) 317
BanII GRGCYC 1 cut(s) 149
BbvI GCAGC 1 cut(s) 16
BccI CCATC 1 cut(s) 115
BceAI ACGGC 1 cut(s) 411
BciT130I CCWGG 1 cut(s) 70
BciVI GTATCC 1 cut(s) 444
BcoDI GTCTC 2 cut(s) 327, 356
BfmI CTRYAG 2 cut(s) 237, 267
BfuI GTATCC 1 cut(s) 444
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 70
BmrFI CCNGG 1 cut(s) 70
BpmI CTGGAG 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 432
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 436
BsaXI ACNNNNNCTCC 2 cut(s) 343, 373
Bsc4I CCNNNNNNNGG 2 cut(s) 143, 214
Bse1I ACTGG 2 cut(s) 115, 219
Bse3DI GCAATG 2 cut(s) 14, 177
Bse8I GATNNNNATC 1 cut(s) 432
BseBI CCWGG 1 cut(s) 70
BseDI CCNNGG 1 cut(s) 69
BseJI GATNNNNATC 1 cut(s) 432
BseLI CCNNNNNNNGG 2 cut(s) 143, 214
BseMI GCAATG 2 cut(s) 14, 177
BseNI ACTGG 2 cut(s) 115, 219
BseXI GCAGC 1 cut(s) 16
BseYI CCCAGC 1 cut(s) 208
BsiSI CCGG 1 cut(s) 437
BslI CCNNNNNNNGG 2 cut(s) 143, 214
BsmAI GTCTC 2 cut(s) 327, 356
BsmBI CGTCTC 1 cut(s) 327
Bsp1286I GDGCHC 1 cut(s) 149
Bsp143I GATC 2 cut(s) 133, 388
BspHI TCATGA 1 cut(s) 274
BspMAI CTGCAG 1 cut(s) 241
BspPI GGATC 2 cut(s) 128, 383
BsrDI GCAATG 2 cut(s) 14, 177
BsrI ACTGG 2 cut(s) 115, 219
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 2 cut(s) 133, 388
Bst2UI CCWGG 1 cut(s) 70
Bst4CI ACNGT 2 cut(s) 305, 347
Bst6I CTCTTC 1 cut(s) 412
BstC8I GCNNGC 2 cut(s) 90, 251
BstKTI GATC 2 cut(s) 136, 391
BstMAI GTCTC 2 cut(s) 327, 356
BstMBI GATC 2 cut(s) 133, 388
BstNI CCWGG 1 cut(s) 70
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 1 cut(s) 68
BstSFI CTRYAG 2 cut(s) 237, 267
BstV1I GCAGC 1 cut(s) 16
BsuI GTATCC 1 cut(s) 444
BtsIMutI CAGTG 1 cut(s) 212
Cac8I GCNNGC 2 cut(s) 90, 251
CciI TCATGA 1 cut(s) 274
CseI GACGC 1 cut(s) 312
CviAII CATG 3 cut(s) 250, 275, 294
CviJI RGCY 5 cut(s) 92, 127, 147, 266, 372
CviKI_1 RGCY 5 cut(s) 92, 127, 147, 266, 372
DpnI GATC 2 cut(s) 135, 390
DpnII GATC 2 cut(s) 133, 388
Eam1104I CTCTTC 1 cut(s) 412
EarI CTCTTC 1 cut(s) 412
Eco24I GRGCYC 1 cut(s) 149
EcoRII CCWGG 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 149
Esp3I CGTCTC 1 cut(s) 327
FaeI CATG 3 cut(s) 253, 278, 297
FaiI YATR 8 cut(s) 83, 194, 199, 251, 269, 276, 287, 295
FatI CATG 3 cut(s) 249, 274, 293
Fnu4HI GCNGC 1 cut(s) 5
FriOI GRGCYC 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 5
GluI GCNGC 1 cut(s) 5
GsaI CCCAGC 1 cut(s) 212
GsuI CTGGAG 1 cut(s) 52
HapII CCGG 1 cut(s) 437
HgaI GACGC 1 cut(s) 312
Hin1II CATG 3 cut(s) 253, 278, 297
HindIII AAGCTT 1 cut(s) 370
HinfI GANTC 2 cut(s) 338, 449
HpaII CCGG 1 cut(s) 437
HphI GGTGA 1 cut(s) 317
Hpy188I TCNGA 4 cut(s) 120, 151, 351, 388
Hpy188III TCNNGA 3 cut(s) 25, 275, 453
HpyAV CCTTC 1 cut(s) 251
HpyCH4III ACNGT 2 cut(s) 305, 347
HpyCH4V TGCA 4 cut(s) 4, 88, 201, 239
Hsp92II CATG 3 cut(s) 253, 278, 297
Kzo9I GATC 2 cut(s) 133, 388
LmnI GCTCC 1 cut(s) 124
LpnPI CCDG 9 cut(s) 55, 74, 82, 96, 113, 152, 200, 222, 450
Lsp1109I GCAGC 1 cut(s) 16
MalI GATC 2 cut(s) 135, 390
MboI GATC 2 cut(s) 133, 388
MboII GAAGA 1 cut(s) 399
MhlI GDGCHC 1 cut(s) 149
MluCI AATT 3 cut(s) 375, 399, 442
MlyI GAGTC 1 cut(s) 347
MmeI TCCRAC 2 cut(s) 329, 416
MnlI CCTC 2 cut(s) 309, 415
MseI TTAA 4 cut(s) 156, 183, 221, 374
MspI CCGG 1 cut(s) 437
MspR9I CCNGG 1 cut(s) 70
MvaI CCWGG 1 cut(s) 70
NdeII GATC 2 cut(s) 133, 388
NlaIII CATG 3 cut(s) 253, 278, 297
NspI RCATGY 1 cut(s) 253
PaeI GCATGC 1 cut(s) 253
PagI TCATGA 1 cut(s) 274
PfeI GAWTC 1 cut(s) 449
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 1 cut(s) 346
PpsI GAGTC 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 68
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 1 cut(s) 68
PstI CTGCAG 1 cut(s) 241
SaqAI TTAA 4 cut(s) 156, 183, 221, 374
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 2 cut(s) 133, 388
SchI GAGTC 1 cut(s) 347
ScrFI CCNGG 1 cut(s) 70
SduI GDGCHC 1 cut(s) 149
SetI ASST 7 cut(s) 129, 189, 229, 262, 268, 320, 374
SfcI CTRYAG 2 cut(s) 237, 267
SphI GCATGC 1 cut(s) 253
Sse9I AATT 3 cut(s) 375, 399, 442
StyD4I CCNGG 1 cut(s) 68
TaaI ACNGT 2 cut(s) 305, 347
TaqI TCGA 2 cut(s) 132, 262
TasI AATT 3 cut(s) 375, 399, 442
TfiI GAWTC 1 cut(s) 449
Tru1I TTAA 4 cut(s) 156, 183, 221, 374
Tru9I TTAA 4 cut(s) 156, 183, 221, 374
TscAI CASTG 1 cut(s) 219
TseI GCWGC 1 cut(s) 4
TspDTI ATGAA 5 cut(s) 40, 52, 263, 291, 324
TspRI CASTG 1 cut(s) 219
XapI RAATTY 1 cut(s) 442
XceI RCATGY 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.