RchiOBHm_Chr5g0012291

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
8251327 .. 8252968
1642 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29287

Sequence Viewer

Length: 726 bp
ATGCCTATTGTGGTTGGAGCTTCAGTTTTGTGCCTCTTCTTCTTCTTCTTCATTTTCGGCATTCTTTGGTGGAAAGGGTGTCTGGTGGATAGCCAGACATCAAGGGAAGAAGCTCTGAGAGGACTAGATTTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCAACTAATAACTTTGATCCTTTAAATAAAATTGCAGAAGGTGGTTTTGGTTGTGTCTACAAGGCAGGCATATTATTGGATGGCACTACAATTGCAGTTAAGCAACTCTTTTCAAAATTGAAGCAAGGAAATCGTGAGTTCGTGAATGAAATTGGCATGATATCTGGTTTACACCATCCAAATGTGGCCCTTGTTTTGCAACAAAAAGGAGACCTAATGGAGCTGGTGGATCCAAAGTTGAATGCTGGGTTCAACAGGGAAGAGGCACTTAGAATGATAAAGGTAGCTCTACTATGTGCCAACTCATCACCAGCACTAAGACCCACGTTGTCTGAAGTAGTGAGCATGCTTGAAGGCCGAACTGTTGTTCATGAAGTGACCATAAATCCAAGTATTTATGATGATGAAATGAGGTTTAAGGCCTTTACAGAGGACTCTGATCCGAATATGGAAGAGAGCTTTGAGGAGACTCGAAGCTTGATTCACTCCAATTCAAAATGGACTGCCTCTTCCTCATCGTCAGTCCTGAATATTGATACAGTTAAACTTGGGACTTGA

Protein Analysis

241

Amino Acids

26.71

Weight (kDa)

5.46

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 225
AclWI GGATC 4 cut(s) 179, 392, 405, 602
AcuI CTGAAG 2 cut(s) 6, 522
AgsI TTSAA 6 cut(s) 282, 289, 409, 421, 521, 663
AjuI GAANNNNNNNTTGG 2 cut(s) 198, 230
AluBI AGCT 7 cut(s) 20, 113, 167, 391, 455, 627, 645
AluI AGCT 7 cut(s) 20, 113, 167, 391, 455, 627, 645
Alw26I GTCTC 2 cut(s) 372, 629
AlwI GGATC 4 cut(s) 179, 392, 405, 602
AoxI GGCC 3 cut(s) 354, 523, 588
ApeKI GCWGC 1 cut(s) 167
AspS9I GGNCC 1 cut(s) 355
AsuHPI GGTGA 2 cut(s) 139, 468
BamHI GGATCC 1 cut(s) 397
BbvI GCAGC 1 cut(s) 154
BccI CCATC 2 cut(s) 242, 351
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BcoDI GTCTC 2 cut(s) 372, 629
BfaI CTAG 1 cut(s) 125
BisI GCNGC 1 cut(s) 168
BlsI GCNGC 1 cut(s) 169
BmgT120I GGNCC 1 cut(s) 355
BmiI GGNNCC 1 cut(s) 399
BpuEI CTTGAG 1 cut(s) 172
BsaI GGTCTC 1 cut(s) 372
BsaXI ACNNNNNCTCC 2 cut(s) 9, 39
Bse1I ACTGG 1 cut(s) 142
BseGI GGATG 2 cut(s) 253, 343
BseMII CTCAG 1 cut(s) 107
BseNI ACTGG 1 cut(s) 142
BseRI GAGGAG 1 cut(s) 647
BseXI GCAGC 1 cut(s) 154
BseYI CCCAGC 1 cut(s) 413
BshFI GGCC 3 cut(s) 356, 525, 590
BsmAI GTCTC 2 cut(s) 372, 629
BsmI GAATGC 2 cut(s) 60, 415
BsnI GGCC 3 cut(s) 356, 525, 590
Bso31I GGTCTC 1 cut(s) 372
Bsp143I GATC 3 cut(s) 184, 397, 607
BspANI GGCC 3 cut(s) 356, 525, 590
BspCNI CTCAG 1 cut(s) 108
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 1 cut(s) 399
BspPI GGATC 4 cut(s) 179, 392, 405, 602
BspTNI GGTCTC 1 cut(s) 372
BsrI ACTGG 1 cut(s) 142
BssMI GATC 3 cut(s) 184, 397, 607
Bst4CI ACNGT 2 cut(s) 532, 709
Bst6I CTCTTC 4 cut(s) 41, 423, 615, 682
BstC8I GCNNGC 2 cut(s) 235, 515
BstDEI CTNAG 3 cut(s) 116, 437, 485
BstF5I GGATG 2 cut(s) 253, 343
BstKTI GATC 3 cut(s) 187, 400, 610
BstMAI GTCTC 2 cut(s) 372, 629
BstMBI GATC 3 cut(s) 184, 397, 607
BstNSI RCATGY 1 cut(s) 517
BstV1I GCAGC 1 cut(s) 154
BstX2I RGATCY 1 cut(s) 397
BstYI RGATCY 1 cut(s) 397
BsuRI GGCC 3 cut(s) 356, 525, 590
BtsCI GGATG 2 cut(s) 253, 343
Cac8I GCNNGC 2 cut(s) 235, 515
CciI TCATGA 1 cut(s) 538
Cfr13I GGNCC 1 cut(s) 355
CviAII CATG 3 cut(s) 325, 514, 539
DdeI CTNAG 3 cut(s) 116, 437, 485
DpnI GATC 3 cut(s) 186, 399, 609
DpnII GATC 3 cut(s) 184, 397, 607
DraI TTTAAA 1 cut(s) 192
Eam1104I CTCTTC 4 cut(s) 41, 423, 615, 682
EarI CTCTTC 4 cut(s) 41, 423, 615, 682
Eco147I AGGCCT 1 cut(s) 590
Eco31I GGTCTC 1 cut(s) 372
Eco32I GATATC 1 cut(s) 330
Eco57I CTGAAG 2 cut(s) 6, 522
EcoRV GATATC 1 cut(s) 330
FaeI CATG 3 cut(s) 328, 517, 542
FaiI YATR 8 cut(s) 239, 326, 463, 515, 540, 551, 567, 617
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 420, 452
FatI CATG 3 cut(s) 324, 513, 538
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 168
FokI GGATG 2 cut(s) 260, 330
Fsp4HI GCNGC 1 cut(s) 168
FspBI CTAG 1 cut(s) 125
GluI GCNGC 1 cut(s) 168
GsaI CCCAGC 1 cut(s) 417
HaeIII GGCC 3 cut(s) 356, 525, 590
Hin1II CATG 3 cut(s) 328, 517, 542
HindIII AAGCTT 1 cut(s) 643
HinfI GANTC 3 cut(s) 602, 637, 649
HphI GGTGA 2 cut(s) 139, 468
Hpy166II GTNNAC 2 cut(s) 226, 338
Hpy188I TCNGA 4 cut(s) 117, 502, 607, 612
Hpy188III TCNNGA 4 cut(s) 302, 310, 539, 694
Hpy8I GTNNAC 2 cut(s) 226, 338
HpyAV CCTTC 2 cut(s) 200, 515
HpyCH4III ACNGT 2 cut(s) 532, 709
HpyCH4IV ACGT 1 cut(s) 494
HpyCH4V TGCA 5 cut(s) 133, 170, 203, 263, 367
HpyF3I CTNAG 3 cut(s) 116, 437, 485
HpySE526I ACGT 1 cut(s) 494
Hsp92II CATG 3 cut(s) 328, 517, 542
Kzo9I GATC 3 cut(s) 184, 397, 607
LmnI GCTCC 2 cut(s) 17, 388
Lsp1109I GCAGC 1 cut(s) 154
MaeI CTAG 1 cut(s) 125
MaeII ACGT 1 cut(s) 494
MaeIII GTNAC 1 cut(s) 544
MalI GATC 3 cut(s) 186, 399, 609
MboI GATC 3 cut(s) 184, 397, 607
MboII GAAGA 9 cut(s) 28, 31, 34, 37, 40, 119, 440, 632, 669
MfeI CAATTG 1 cut(s) 258
MflI RGATCY 1 cut(s) 397
MluCI AATT 6 cut(s) 159, 198, 258, 284, 318, 658
MlyI GAGTC 2 cut(s) 596, 631
MnlI CCTC 9 cut(s) 44, 113, 147, 424, 573, 592, 625, 685, 691
MseI TTAA 5 cut(s) 162, 191, 267, 585, 711
MslI CAYNNNNRTG 1 cut(s) 348
MunI CAATTG 1 cut(s) 258
Mva1269I GAATGC 2 cut(s) 60, 415
NdeII GATC 3 cut(s) 184, 397, 607
NlaIII CATG 3 cut(s) 328, 517, 542
NlaIV GGNNCC 1 cut(s) 399
NmuCI GTSAC 1 cut(s) 544
NspI RCATGY 1 cut(s) 517
PaeI GCATGC 1 cut(s) 517
PagI TCATGA 1 cut(s) 538
PceI AGGCCT 1 cut(s) 590
PctI GAATGC 2 cut(s) 60, 415
PfeI GAWTC 1 cut(s) 649
PkrI GCNGC 1 cut(s) 169
PleI GAGTC 2 cut(s) 596, 631
PpsI GAGTC 2 cut(s) 596, 631
PspFI CCCAGC 1 cut(s) 413
PspN4I GGNNCC 1 cut(s) 399
PspPI GGNCC 1 cut(s) 355
PsuI RGATCY 1 cut(s) 397
RseI CAYNNNNRTG 1 cut(s) 348
SaqAI TTAA 5 cut(s) 162, 191, 267, 585, 711
SatI GCNGC 1 cut(s) 168
Sau3AI GATC 3 cut(s) 184, 397, 607
Sau96I GGNCC 1 cut(s) 355
SchI GAGTC 2 cut(s) 596, 631
SmiMI CAYNNNNRTG 1 cut(s) 348
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
SphI GCATGC 1 cut(s) 517
Sse9I AATT 6 cut(s) 159, 198, 258, 284, 318, 658
SseBI AGGCCT 1 cut(s) 590
SspI AATATT 1 cut(s) 700
SspMI CTAG 1 cut(s) 125
StuI AGGCCT 1 cut(s) 590
TaaI ACNGT 2 cut(s) 532, 709
TaiI ACGT 1 cut(s) 497
TaqI TCGA 1 cut(s) 640
TasI AATT 6 cut(s) 159, 198, 258, 284, 318, 658
TfiI GAWTC 1 cut(s) 649
Tru1I TTAA 5 cut(s) 162, 191, 267, 585, 711
Tru9I TTAA 5 cut(s) 162, 191, 267, 585, 711
TseFI GTSAC 1 cut(s) 544
TseI GCWGC 1 cut(s) 167
Tsp45I GTSAC 1 cut(s) 544
TspDTI ATGAA 5 cut(s) 40, 330, 527, 555, 588
XceI RCATGY 1 cut(s) 517
XmiI GTMKAC 1 cut(s) 225
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.