Rmu_sc0005343.1_g000008

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005343.1
Physical Location & Seq
Reverse (-)
16250 .. 27606
11357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005343.1_g000008.1.cds

Sequence Viewer

Length: 3612 bp
atggatttgaaatgtgaaccggaaagttctagagatctttttctcaagagggaacttctgatcgagttttctgttttgctcttgcctggtttgaaggctgaagaggttgatgtgttattcaatacactaaagcttgcattagaggacaagaaaggccagttccaaagcggacgtccgcactttgctgaagtgcggacggcgacgcagcggaggcgcaggcggcgatggcggcgcccggcttgcaggagggaggcatctcgaacggttttgggcagtgttcgtgttcgaggtcggaggagggtggggttgcaggttctaggcagctctgcaatgacgtcgccggcgactccactgactgcagacctctccacccgacccctggtggtgacggcggctcagggcttggcggactattctcggcagcgttcgaggtcggagttgcaggtttctaggcagcgctgcaaccatgtcgccggcgactccaccgactacagatcggtccgtctgacccctggcatccttccggcaagccccgcctctccatctcgccccaaaccgagctgcagcgtcgacgtccgcactttaacaacagtgcggacgtcctctttggaacctctcgtcagatcagttgaagcacaatccccgcgccttcctgttcaagaagtggaagcactgagagaaattggttcacaattgggaaaaaaagactggaacttcgacgtagacccatgccacaacgacaccagctgggctaccccaacatctgatcgttactcgctatacaccaacatcgtctcttgcaactgttcctacgtccctgatggtgtatgccacgtccccagtattgttctgacagggcaagatcttgctggtgtacttccaccatctattgcaaagttaccctgccttacacaagtttctttcacaaggaactacctcagtggtaacataccacttgaatgggcttctacaaagttgcaaaacctgtcccttactgtgaacaacttatcaggaacaatccctgcatacttggggaacattactaccctaaaactactgttcctagacagtaaccaattttatggaactgttcctcctgagcttgggaagctggttaacttggagcgtctcctactcggtcaaaacaatctctcaggagagttgccattggatctctctaatctaaataaattaaaagtacttaagattggcagtaacaacttcaatggaacaatacctgatttctttgaaagttggagtcagcttcagagtttagagatccaagctagcggtctccaagggcccattccgcctagcatttattccttgaataaattaagaatattaaggatcagtgacttgagtggatacagttcaccatttccagacttgagaaatatgacacttatgcacgttttaatgctaaggagctgcaatctagttggacctatccctgattacatatcgaaattgacagcattacgtatattagatctcagcttcaacagattggaaggaagtattcctgactttggaataggcatattggacaacttgtgtctgacacataacgccctcactgggtctattccagagttatctgcacctcttccagattgggtcaagagaaatcgcaataacagtaactactacatggatatttcttacaataaatttcctgagagctctgagttaaattgtacagaaaacctgaacttgttcaaaagcttttctgcacaagacatctcattatctggagggtgcctgaagaaatatccttgtcgagaagatcggctttctttgcatataaactgtggtggaagaaacaccacagttggaggaatcaactttgaaggtgatcaagacccaggaggtccatcagcattcgttcctgctggagctaactggggatttagcaacactggacatttctgggatactgaatttggtgaaaaatacacagcagataatacatctgtactccgaatgagcaactctgagttgtacacaaatgcacgcctctctcctctttctcttacgtattatgcacgctgcttggcaaatggaagttatactgtgagacttcacttttcagagataataattagaggaaatagatctttccacagtcttggaatacggatatttgatgtttatattcaggagaaactgatgttgaaggattttaacattgaagtggaagcacaaggggttgataaagcagtcataaaggaatttaaagcagttgaggtgaaggataaaaccttagagatcagatttcattggtctggcaaagggacaacagcgtccccgagaagaggagtatatggtcctcttatatcagctatctctatagagtttgagtccactcattctggtctccgaaaagagtccactcctcgtgatagcaaaaagaaggtatttacagtggctggagcttcagttttgtgtcttgttttcttgatttcaggcattctttggtggaatggatgtctggatagcaagacatccagggaaaaagctttgagaagactggatttgcaatctggctttttcgccttcaggcaaattagagctgccactaacagctttgatcctgtaaacaaaattggggagggtggttttggctctgtctacaagggtatattattggatggtactataattgcggtcaagcaactatcttcaaaatcaaagcaaggaaatcgtgaatttgtgaacgaaataggcatgatttctggtttgcaacatccaaatcttgttagattgtatggatgttgtattgaagcaaatgaattactgttggtgtatgaatatatggaaaacaatagtcttgcaggtgctttatttggcccagaggaaagtccactcaaattggactggcctacaaggcagaaaatattcctgggcatagcaaaaggtctggcttttctgcatgaggagtcagcgttgaaggttgtacatagagacatcaaaactacaaatgtattactggacaaagatcttaatgctaagatctcagactttggtctggcaaagctcgatgaagaagagaacacccacattagcacaagtgttgctggaactataggatacatggcgccagaatacgcactatggggttatttaaccttcaaagcagatgtctttagttttggtgttgttgcattggaaatagttgctggaaagaacaacatgaaatttcgaccaaatgaggattttgtaggccttgtggattgggctcttgttttacaacaaaaagagagtttagtggagcttgtggatccaaggttagggtcagatttcagtaacgaagaggcggttagaatggttaaagtagctctgctatgcatcaatccggtagctgcactcaggcctaccatgtctgcagtcgtgagtatgcttgaagggcgaaccgctgtcgatgaattgattatggatccaaaaatatatagtgaagaaatgaggttaacagccttgagaaatccatttgagcagattgcacaagagagagcaggtggaagtcaaagcttgatacattcgtccgatgcatcatggaatgattcttctgctcctactttatcttcagatctctatataatcaatccttag

Protein Analysis

1203

Amino Acids

133.29

Weight (kDa)

8.38

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2828, 3506
AasI GACNNNNNNGTC 1 cut(s) 2305
AatII GACGTC 4 cut(s) 175, 338, 576, 602
Acc36I ACCTGC 4 cut(s) 301, 433, 2828, 3506
AccB1I GGYRCC 3 cut(s) 231, 1761, 3100
AccI GTMKAC 3 cut(s) 570, 723, 2634
AccII CGCG 1 cut(s) 646
AclWI GGATC 8 cut(s) 1179, 1273, 1358, 2588, 3278, 3291, 3434, 3447
AcsI RAATTY 5 cut(s) 1673, 1943, 2234, 2711, 3200
AcuI CTGAAG 7 cut(s) 120, 207, 1250, 1787, 2424, 2545, 3570
AcyI GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
AfaI GTAC 7 cut(s) 876, 1200, 1702, 1980, 2006, 2659, 2961
AfeI AGCGCT 1 cut(s) 458
AfiI CCNNNNNNNGG 6 cut(s) 379, 1103, 1532, 1581, 2318, 3293
AflII CTTAAG 1 cut(s) 1202
AjiI CACGTC 1 cut(s) 835
AjnI CCWGG 6 cut(s) 85, 378, 511, 1867, 2510, 2904
AjuI GAANNNNNNNTTGG 2 cut(s) 1290, 1322
AloI GAACNNNNNNTCC 2 cut(s) 1078, 1110
Alw21I GWGCWC 1 cut(s) 1688
Alw26I GTCTC 6 cut(s) 799, 1133, 1298, 2074, 2384, 2961
AlwI GGATC 8 cut(s) 1179, 1273, 1358, 2588, 3278, 3291, 3434, 3447
AlwNI CAGNNNCTG 1 cut(s) 2432
Ama87I CYCGRG 1 cut(s) 2311
Aor51HI AGCGCT 1 cut(s) 458
AoxI GGCC 6 cut(s) 154, 1301, 2851, 2882, 3226, 3374
ApaI GGGCCC 1 cut(s) 1305
ApoI RAATTY 5 cut(s) 1673, 1943, 2234, 2711, 3200
ArsI GACNNNNNNTTYG 8 cut(s) 157, 189, 589, 621, 698, 730, 3129, 3161
Asp700I GAANNNNTTC 2 cut(s) 1718, 2900
AspLEI GCGC 5 cut(s) 216, 234, 459, 648, 3103
AspS9I GGNCC 7 cut(s) 499, 1301, 1302, 1445, 1874, 2330, 2852
AsuC2I CCSGG 1 cut(s) 236
AsuHPI GGTGA 5 cut(s) 397, 1368, 1868, 1961, 2263
AsuNHI GCTAGC 1 cut(s) 1286
AvaI CYCGRG 1 cut(s) 2311
AvaII GGWCC 4 cut(s) 499, 1445, 1874, 2330
BaeGI GKGCMC 1 cut(s) 1305
BaeI ACNNNNGTAYC 2 cut(s) 3527, 3560
BamHI GGATCC 2 cut(s) 3283, 3439
BanI GGYRCC 3 cut(s) 231, 1761, 3100
BanII GRGCYC 3 cut(s) 1305, 1688, 3244
BauI CACGAG 1 cut(s) 2400
BbsI GAAGAC 1 cut(s) 2536
Bbv12I GWGCWC 1 cut(s) 1688
BccI CCATC 6 cut(s) 219, 550, 815, 892, 1885, 2648
BceAI ACGGC 2 cut(s) 213, 405
BcgI CGANNNNNNTGC 6 cut(s) 318, 352, 451, 485, 2687, 2721
BciT130I CCWGG 6 cut(s) 87, 380, 513, 1869, 2512, 2906
BciVI GTATCC 3 cut(s) 1361, 1930, 3086
BclI TGATCA 1 cut(s) 1858
BcnI CCSGG 1 cut(s) 236
BcoDI GTCTC 6 cut(s) 799, 1133, 1298, 2074, 2384, 2961
BfaI CTAG 7 cut(s) 30, 317, 450, 1064, 1287, 1314, 1439
BfmI CTRYAG 6 cut(s) 357, 490, 562, 2352, 3087, 3387
BfoI RGCGCY 3 cut(s) 235, 460, 3104
BfrI CTTAAG 1 cut(s) 1202
BfuAI ACCTGC 4 cut(s) 301, 433, 2828, 3506
BfuI GTATCC 3 cut(s) 1361, 1930, 3086
BglI GCCNNNNNGGC 1 cut(s) 2890
BglII AGATCT 7 cut(s) 34, 862, 1492, 2117, 3001, 3015, 3589
BmcAI AGTACT 1 cut(s) 1200
Bme1390I CCNGG 7 cut(s) 87, 236, 380, 513, 1869, 2512, 2906
Bme18I GGWCC 4 cut(s) 499, 1445, 1874, 2330
BmeT110I CYCGRG 1 cut(s) 2311
BmgBI CACGTC 1 cut(s) 835
BmgT120I GGNCC 7 cut(s) 499, 1301, 1302, 1445, 1874, 2330, 2852
BmiI GGNNCC 7 cut(s) 233, 612, 1303, 1763, 3102, 3285, 3441
BmrFI CCNGG 7 cut(s) 87, 236, 380, 513, 1869, 2512, 2906
BmrI ACTGGG 3 cut(s) 834, 1590, 1915
BmsI GCATC 5 cut(s) 263, 525, 3360, 3538, 3560
BmtI GCTAGC 1 cut(s) 1290
BmuI ACTGGG 3 cut(s) 834, 1590, 1915
BoxI GACNNNNGTC 1 cut(s) 3027
BpiI GAAGAC 1 cut(s) 2536
BpmI CTGGAG 3 cut(s) 1776, 1917, 2454
Bpu10I CCTNAGC 3 cut(s) 396, 1098, 1424
BpuEI CTTGAG 4 cut(s) 29, 1381, 1411, 3499
BpuMI CCSGG 1 cut(s) 236
BsaAI YACGTR 2 cut(s) 1484, 2040
BsaHI GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
BsaI GGTCTC 2 cut(s) 1298, 2384
BsaJI CCNNGG 7 cut(s) 378, 511, 1297, 1867, 2511, 2905, 3287
BsaWI WCCGGW 2 cut(s) 19, 3358
BsaXI ACNNNNNCTCC 6 cut(s) 1078, 1108, 2427, 2457, 2933, 2963
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 1103, 1532, 1581, 2318, 3293
Bse118I RCCGGY 2 cut(s) 340, 473
Bse1I ACTGG 9 cut(s) 157, 713, 840, 1585, 1910, 1927, 2538, 2885, 2997
Bse3DI GCAATG 1 cut(s) 336
BseBI CCWGG 6 cut(s) 87, 380, 513, 1869, 2512, 2906
BseDI CCNNGG 7 cut(s) 378, 511, 1297, 1867, 2511, 2905, 3287
BseGI GGATG 6 cut(s) 516, 2495, 2507, 2659, 2749, 2780
BseLI CCNNNNNNNGG 6 cut(s) 379, 1103, 1532, 1581, 2318, 3293
BseMI GCAATG 1 cut(s) 336
BseNI ACTGG 9 cut(s) 157, 713, 840, 1585, 1910, 1927, 2538, 2885, 2997
BseRI GAGGAG 5 cut(s) 310, 2016, 2334, 2388, 2954
BseSI GKGCMC 1 cut(s) 1305
BseYI CCCAGC 1 cut(s) 747
BsgI GTGCAG 3 cut(s) 1587, 1719, 3351
Bsh1236I CGCG 1 cut(s) 646
BshFI GGCC 6 cut(s) 156, 1303, 2853, 2884, 3228, 3376
BshNI GGYRCC 3 cut(s) 231, 1761, 3100
BsiHKAI GWGCWC 1 cut(s) 1688
BsiHKCI CYCGRG 1 cut(s) 2311
BsiSI CCGG 6 cut(s) 20, 236, 341, 474, 524, 3359
BslFI GGGAC 5 cut(s) 800, 821, 973, 2293, 2311
BslI CCNNNNNNNGG 6 cut(s) 379, 1103, 1532, 1581, 2318, 3293
BsmAI GTCTC 6 cut(s) 799, 1133, 1298, 2074, 2384, 2961
BsmBI CGTCTC 2 cut(s) 799, 1133
BsmFI GGGAC 5 cut(s) 800, 821, 973, 2293, 2311
BsmI GAATGC 2 cut(s) 1883, 2472
BsnI GGCC 6 cut(s) 156, 1303, 2853, 2884, 3228, 3376
Bso31I GGTCTC 2 cut(s) 1298, 2384
BsoBI CYCGRG 1 cut(s) 2311
Bsp120I GGGCCC 1 cut(s) 1301
Bsp1286I GDGCHC 3 cut(s) 1305, 1688, 3244
Bsp1407I TGTACA 3 cut(s) 1700, 2004, 2959
BspANI GGCC 6 cut(s) 156, 1303, 2853, 2884, 3228, 3376
BspFNI CGCG 1 cut(s) 646
BspLI GGNNCC 7 cut(s) 233, 612, 1303, 1763, 3102, 3285, 3441
BspMAI CTGCAG 3 cut(s) 361, 566, 3391
BspMI ACCTGC 4 cut(s) 301, 433, 2828, 3506
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 8 cut(s) 1179, 1273, 1358, 2588, 3278, 3291, 3434, 3447
BspT107I GGYRCC 3 cut(s) 231, 1761, 3100
BspTI CTTAAG 1 cut(s) 1202
BspTNI GGTCTC 2 cut(s) 1298, 2384
BsrDI GCAATG 1 cut(s) 336
BsrFI RCCGGY 2 cut(s) 340, 473
BsrGI TGTACA 3 cut(s) 1700, 2004, 2959
BsrI ACTGG 9 cut(s) 157, 713, 840, 1585, 1910, 1927, 2538, 2885, 2997
BssAI RCCGGY 2 cut(s) 340, 473
BssECI CCNNGG 7 cut(s) 378, 511, 1297, 1867, 2511, 2905, 3287
BssNI GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
BssSI CACGAG 1 cut(s) 2400
BssT1I CCWWGG 2 cut(s) 1297, 3287
Bst2BI CACGAG 1 cut(s) 2400
Bst2UI CCWGG 6 cut(s) 87, 380, 513, 1869, 2512, 2906
Bst6I CTCTTC 5 cut(s) 96, 1614, 2311, 3045, 3309
BstACI GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
BstAFI CTTAAG 1 cut(s) 1202
BstAUI TGTACA 3 cut(s) 1700, 2004, 2959
BstBAI YACGTR 2 cut(s) 1484, 2040
BstC8I GCNNGC 9 cut(s) 135, 218, 241, 342, 475, 529, 1288, 2017, 2050
BstF5I GGATG 6 cut(s) 516, 2495, 2507, 2659, 2749, 2780
BstFNI CGCG 1 cut(s) 646
BstH2I RGCGCY 3 cut(s) 235, 460, 3104
BstHHI GCGC 5 cut(s) 216, 234, 459, 648, 3103
BstMAI GTCTC 6 cut(s) 799, 1133, 1298, 2074, 2384, 2961
BstNI CCWGG 6 cut(s) 87, 380, 513, 1869, 2512, 2906
BstPAI GACNNNNGTC 1 cut(s) 3027
BstSCI CCNGG 7 cut(s) 85, 234, 378, 511, 1867, 2510, 2904
BstSFI CTRYAG 6 cut(s) 357, 490, 562, 2352, 3087, 3387
BstSLI GKGCMC 1 cut(s) 1305
BstSNI TACGTA 2 cut(s) 1484, 2040
BstUI CGCG 1 cut(s) 646
BstV2I GAAGAC 1 cut(s) 2536
BstXI CCANNNNNNTGG 3 cut(s) 960, 1082, 2132
BsuI GTATCC 3 cut(s) 1361, 1930, 3086
BsuRI GGCC 6 cut(s) 156, 1303, 2853, 2884, 3228, 3376
BtgZI GCGATG 1 cut(s) 238
BtrI CACGTC 1 cut(s) 835
BtsCI GGATG 6 cut(s) 516, 2495, 2507, 2659, 2749, 2780
BtsI GCAGTG 1 cut(s) 280
BtsIMutI CAGTG 9 cut(s) 280, 350, 597, 671, 946, 1360, 1578, 1920, 2433
BveI ACCTGC 4 cut(s) 301, 433, 2828, 3506
Cac8I GCNNGC 9 cut(s) 135, 218, 241, 342, 475, 529, 1288, 2017, 2050
CaiI CAGNNNCTG 1 cut(s) 2432
CfoI GCGC 5 cut(s) 216, 234, 459, 648, 3103
Cfr10I RCCGGY 2 cut(s) 340, 473
Cfr13I GGNCC 7 cut(s) 499, 1301, 1302, 1445, 1874, 2330, 2852
CpoI CGGWCCG 1 cut(s) 499
CseI GACGC 4 cut(s) 211, 556, 1115, 2295
Csp6I GTAC 7 cut(s) 875, 1199, 1701, 1979, 2005, 2658, 2960
CspCI CAANNNNNGTGG 2 cut(s) 2856, 2891
CspI CGGWCCG 1 cut(s) 499
CviAII CATG 9 cut(s) 467, 729, 1654, 2731, 2936, 3097, 3196, 3382, 3555
CviQI GTAC 7 cut(s) 875, 1199, 1701, 1979, 2005, 2658, 2960
DinI GGCGCC 2 cut(s) 233, 3102
DraI TTTAAA 1 cut(s) 2239
DrdI GACNNNNNNGTC 1 cut(s) 2305
DseDI GACNNNNNNGTC 1 cut(s) 2305
Eam1104I CTCTTC 5 cut(s) 96, 1614, 2311, 3045, 3309
EarI CTCTTC 5 cut(s) 96, 1614, 2311, 3045, 3309
EciI GGCGGA 2 cut(s) 422, 1299
Ecl136II GAGCTC 1 cut(s) 1686
Eco105I TACGTA 2 cut(s) 1484, 2040
Eco130I CCWWGG 2 cut(s) 1297, 3287
Eco147I AGGCCT 2 cut(s) 3228, 3376
Eco24I GRGCYC 3 cut(s) 1305, 1688, 3244
Eco31I GGTCTC 2 cut(s) 1298, 2384
Eco47I GGWCC 4 cut(s) 499, 1445, 1874, 2330
Eco47III AGCGCT 1 cut(s) 458
Eco53kI GAGCTC 1 cut(s) 1686
Eco57I CTGAAG 7 cut(s) 120, 207, 1250, 1787, 2424, 2545, 3570
Eco88I CYCGRG 1 cut(s) 2311
EcoICRI GAGCTC 1 cut(s) 1686
EcoO109I RGGNCCY 1 cut(s) 1301
EcoRII CCWGG 6 cut(s) 85, 378, 511, 1867, 2510, 2904
EcoT14I CCWWGG 2 cut(s) 1297, 3287
EcoT22I ATGCAT 2 cut(s) 3353, 3553
EcoT38I GRGCYC 3 cut(s) 1305, 1688, 3244
EgeI GGCGCC 2 cut(s) 233, 3102
EheI GGCGCC 2 cut(s) 233, 3102
ErhI CCWWGG 2 cut(s) 1297, 3287
Esp3I CGTCTC 2 cut(s) 799, 1133
FaeI CATG 9 cut(s) 470, 732, 1657, 2734, 2939, 3100, 3199, 3385, 3558
FalI AAGNNNNNCTT 2 cut(s) 1779, 1811
FaqI GGGAC 5 cut(s) 800, 821, 973, 2293, 2311
FatI CATG 9 cut(s) 466, 728, 1653, 2730, 2935, 3096, 3195, 3381, 3554
FauI CCCGC 2 cut(s) 541, 651
FbaI TGATCA 1 cut(s) 1858
FblI GTMKAC 3 cut(s) 570, 723, 2634
FokI GGATG 6 cut(s) 503, 2494, 2502, 2666, 2736, 2787
FriOI GRGCYC 3 cut(s) 1305, 1688, 3244
FspBI CTAG 7 cut(s) 30, 317, 450, 1064, 1287, 1314, 1439
GlaI GCGC 5 cut(s) 215, 233, 458, 647, 3102
GsaI CCCAGC 1 cut(s) 751
GsuI CTGGAG 3 cut(s) 1776, 1917, 2454
HaeII RGCGCY 3 cut(s) 235, 460, 3104
HaeIII GGCC 6 cut(s) 156, 1303, 2853, 2884, 3228, 3376
HapII CCGG 6 cut(s) 20, 236, 341, 474, 524, 3359
HgaI GACGC 4 cut(s) 211, 556, 1115, 2295
HhaI GCGC 5 cut(s) 216, 234, 459, 648, 3103
Hin1I GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
Hin1II CATG 9 cut(s) 470, 732, 1657, 2734, 2939, 3100, 3199, 3385, 3558
Hin6I GCGC 5 cut(s) 214, 232, 457, 646, 3101
HinP1I GCGC 5 cut(s) 214, 232, 457, 646, 3101
HincII GTYRAC 3 cut(s) 571, 1117, 3471
HindII GTYRAC 3 cut(s) 571, 1117, 3471
HindIII AAGCTT 4 cut(s) 131, 1726, 2520, 3529
HinfI GANTC 8 cut(s) 346, 479, 1258, 1842, 2363, 2390, 2942, 3563
HpaI GTTAAC 2 cut(s) 1117, 3471
HpaII CCGG 6 cut(s) 20, 236, 341, 474, 524, 3359
HphI GGTGA 5 cut(s) 397, 1368, 1868, 1961, 2263
Hpy99I CGWCG 5 cut(s) 205, 340, 572, 575, 722
Hsp92I GRCGYC 6 cut(s) 172, 232, 335, 573, 599, 3101
Hsp92II CATG 9 cut(s) 470, 732, 1657, 2734, 2939, 3100, 3199, 3385, 3558
HspAI GCGC 5 cut(s) 214, 232, 457, 646, 3101
KasI GGCGCC 2 cut(s) 231, 3100
KroI GCCGGC 2 cut(s) 340, 473
KroNI GCCGGC 2 cut(s) 342, 475
Ksp22I TGATCA 1 cut(s) 1858
KspAI GTTAAC 2 cut(s) 1117, 3471
LmnI GCTCC 6 cut(s) 1123, 1428, 1898, 2435, 3274, 3577
LweI GCATC 5 cut(s) 263, 525, 3360, 3538, 3560
MaeI CTAG 7 cut(s) 30, 317, 450, 1064, 1287, 1314, 1439
MaeIII GTNAC 9 cut(s) 385, 770, 897, 944, 1070, 1214, 1355, 1643, 3308
MfeI CAATTG 1 cut(s) 692
MhlI GDGCHC 3 cut(s) 1305, 1688, 3244
Mly113I GGCGCC 2 cut(s) 232, 3101
MlyI GAGTC 6 cut(s) 340, 473, 1267, 2372, 2399, 2951
MmeI TCCRAC 5 cut(s) 272, 414, 1235, 1423, 1816
Mph1103I ATGCAT 2 cut(s) 3353, 3553
MreI CGCCGGCG 2 cut(s) 340, 473
MroNI GCCGGC 2 cut(s) 340, 473
MroXI GAANNNNTTC 2 cut(s) 1718, 2900
MslI CAYNNNNRTG 2 cut(s) 958, 2195
MspA1I CMGCKG 3 cut(s) 208, 747, 3419
MspCI CTTAAG 1 cut(s) 1202
MspI CCGG 6 cut(s) 20, 236, 341, 474, 524, 3359
MspR9I CCNGG 7 cut(s) 87, 236, 380, 513, 1869, 2512, 2906
MunI CAATTG 1 cut(s) 692
Mva1269I GAATGC 2 cut(s) 1883, 2472
MvaI CCWGG 6 cut(s) 87, 380, 513, 1869, 2512, 2906
MvnI CGCG 1 cut(s) 646
NaeI GCCGGC 2 cut(s) 342, 475
NarI GGCGCC 2 cut(s) 232, 3101
NciI CCSGG 1 cut(s) 236
NgoMIV GCCGGC 2 cut(s) 340, 473
NheI GCTAGC 1 cut(s) 1286
NlaIII CATG 9 cut(s) 470, 732, 1657, 2734, 2939, 3100, 3199, 3385, 3558
NlaIV GGNNCC 7 cut(s) 233, 612, 1303, 1763, 3102, 3285, 3441
NmeAIII GCCGAG 1 cut(s) 397
NmuCI GTSAC 2 cut(s) 385, 1355
NsiI ATGCAT 2 cut(s) 3353, 3553
PaqCI CACCTGC 2 cut(s) 2828, 3506
PceI AGGCCT 2 cut(s) 3228, 3376
PcsI WCGNNNNNNNCGW 1 cut(s) 341
PctI GAATGC 2 cut(s) 1883, 2472
PdiI GCCGGC 2 cut(s) 342, 475
PdmI GAANNNNTTC 2 cut(s) 1718, 2900
PfeI GAWTC 2 cut(s) 1842, 3563
PleI GAGTC 6 cut(s) 340, 473, 1266, 2371, 2398, 2950
PluTI GGCGCC 2 cut(s) 235, 3104
PpsI GAGTC 6 cut(s) 340, 473, 1266, 2371, 2398, 2950
Ppu21I YACGTR 2 cut(s) 1484, 2040
PshAI GACNNNNGTC 1 cut(s) 3027
Psp124BI GAGCTC 1 cut(s) 1688
Psp6I CCWGG 6 cut(s) 85, 378, 511, 1867, 2510, 2904
PspFI CCCAGC 1 cut(s) 747
PspGI CCWGG 6 cut(s) 85, 378, 511, 1867, 2510, 2904
PspN4I GGNNCC 7 cut(s) 233, 612, 1303, 1763, 3102, 3285, 3441
PspOMI GGGCCC 1 cut(s) 1301
PspPI GGNCC 7 cut(s) 499, 1301, 1302, 1445, 1874, 2330, 2852
PstI CTGCAG 3 cut(s) 361, 566, 3391
PstNI CAGNNNCTG 1 cut(s) 2432
PvuII CAGCTG 1 cut(s) 747
RsaI GTAC 7 cut(s) 876, 1200, 1702, 1980, 2006, 2659, 2961
RsaNI GTAC 7 cut(s) 875, 1199, 1701, 1979, 2005, 2658, 2960
RseI CAYNNNNRTG 2 cut(s) 958, 2195
Rsr2I CGGWCCG 1 cut(s) 499
RsrII CGGWCCG 1 cut(s) 499
SacI GAGCTC 1 cut(s) 1688
SalI GTCGAC 1 cut(s) 569
Sau96I GGNCC 7 cut(s) 499, 1301, 1302, 1445, 1874, 2330, 2852
ScaI AGTACT 1 cut(s) 1200
SchI GAGTC 6 cut(s) 340, 473, 1267, 2372, 2399, 2951
ScrFI CCNGG 7 cut(s) 87, 236, 380, 513, 1869, 2512, 2906
SduI GDGCHC 3 cut(s) 1305, 1688, 3244
SfaNI GCATC 5 cut(s) 263, 525, 3360, 3538, 3560
SfcI CTRYAG 6 cut(s) 357, 490, 562, 2352, 3087, 3387
SfoI GGCGCC 2 cut(s) 233, 3102
SgrAI CRCCGGYG 2 cut(s) 340, 473
SgrDI CGTCGACG 1 cut(s) 569
SinI GGWCC 4 cut(s) 499, 1445, 1874, 2330
SmiMI CAYNNNNRTG 2 cut(s) 958, 2195
SmlI CTYRAG 5 cut(s) 44, 1202, 1360, 1390, 3478
SmoI CTYRAG 5 cut(s) 44, 1202, 1360, 1390, 3478
SnaBI TACGTA 2 cut(s) 1484, 2040
SseBI AGGCCT 2 cut(s) 3228, 3376
SspDI GGCGCC 2 cut(s) 231, 3100
SspI AATATT 2 cut(s) 1344, 2901
SspMI CTAG 7 cut(s) 30, 317, 450, 1064, 1287, 1314, 1439
SstI GAGCTC 1 cut(s) 1688
StuI AGGCCT 2 cut(s) 3228, 3376
StyD4I CCNGG 7 cut(s) 85, 234, 378, 511, 1867, 2510, 2904
StyI CCWWGG 2 cut(s) 1297, 3287
TaqII GACCGA 2 cut(s) 487, 1127
TatI WGTACW 6 cut(s) 874, 1198, 1700, 1978, 2004, 2959
TauI GCSGC 3 cut(s) 223, 232, 395
TfiI GAWTC 2 cut(s) 1842, 3563
TscAI CASTG 9 cut(s) 280, 357, 597, 678, 946, 1360, 1585, 1927, 2433
TseFI GTSAC 2 cut(s) 385, 1355
Tsp45I GTSAC 2 cut(s) 385, 1355
TspDTI ATGAA 6 cut(s) 2270, 2808, 2826, 3060, 3212, 3441
TspGWI ACGGA 2 cut(s) 491, 2155
TspRI CASTG 9 cut(s) 280, 357, 597, 678, 946, 1360, 1585, 1927, 2433
Vha464I CTTAAG 1 cut(s) 1202
VpaK11BI GGWCC 4 cut(s) 499, 1445, 1874, 2330
XapI RAATTY 5 cut(s) 1673, 1943, 2234, 2711, 3200
XbaI TCTAGA 1 cut(s) 29
XcmI CCANNNNNNNNNTGG 1 cut(s) 376
XmiI GTMKAC 3 cut(s) 570, 723, 2634
XmnI GAANNNNTTC 2 cut(s) 1718, 2900
XspI CTAG 7 cut(s) 30, 317, 450, 1064, 1287, 1314, 1439
ZraI GACGTC 4 cut(s) 173, 336, 574, 600
ZrmI AGTACT 1 cut(s) 1200
Zsp2I ATGCAT 2 cut(s) 3353, 3553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.