MD00G1006500.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
930092 .. 939266
9175 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1006500.v1.1.491

Sequence Viewer

Length: 3015 bp
ATGGCAAGATTTCTCATCGTGCTCACATTGATCCTTTGCTTCTGCTTTTCATCAACAGTCAAAGCTGAAGCACAATCTCAAACTGCTCCTAGAGAAGTGGAAGTACTCAAAGAAATACTTATACAACTGGGGAAAAAAGAATGGAACTTCAGCATAGACCCATGCATCAATGACACAAATTGGTTTACCCAAAAATCTGATAAATTAACTCTCTACAACAACACTGTCATCTGCAACTGCTCCAACCCTGATGGTTTTTGCCATGTTGTCAGCATTTTTCTCAAAGGGCAAGATCTTGCTGGTGTACTTCCACTATCAATTGCAAAGTTACCCTACCTAAAAAAAGTTGATTTCACCCGGAACTACCTCAGCGGTACTATACCGCGTGAATGGGCTTCGACGAAGTTGGAATCTCTGTCCCTTACCGTGAACAACTTAACGGGACCAATCCCTGGCTACTTGGGAAACATTACCACCCTACTCTCTCTGAGCTTAGAGAATAACATGTTTTCTGGAACTGTTCCTCCTGAGCTTGGGAAATTGGTTTTCTTGAATTATCTCAATCTGAATGCCAACAATCTCACAGGAGAGCTGCCCAGGGCTCTCACTAATCTGACCGAGTTAACAGAACTTAGGATTAGCAGTAACAAATTCACTGGAAAAATACCTGATTTTTTTCAAAGCTGGAAACAACTTCAGAAACTAGAGATCCAAGCTAGTGGCTTCCAAGGTCCAATTCCATCGAGCATTTCTGTCTTGAGTAATTTAAAAGAGCTAAGGATCAGTGATATAGGTGGAGAGGGTTCAGAATTTCCACCCTTGAGTAGTATGACAAGCATGAATAGATTAATGTTGAGGAGCTGTGGCTTGTCTGGAAGTATACCCCATTATATTCCAACAATGGCAAACTTGATAGTATTAGATCTCAGCTTCAACAATTTGGAAGGAAACATTCCTGATATGGCGGCCCTGTCAAACTTGCAGTGGCTATATCTCACAAGCAACTTGCTCACTGGGCCTATTCCAGACTGGATCATGAAGAGACATCGTAAAACCCAGATGGATCTTTCTTACAATAATTTTTCTCAGATCTCCGAGCAGCCAACTACTTGTAGAGAACAATTGAACTTGTTCAAAAGCTTTTTCGGACAAGGCAACTCATTATCTGGAGGGTGCCTGGAAAAAATTTCATGTCCAAAAGAGGAGTACTCATTACATATTAACTGTGGAGGAAGTAAAACCACTGTTGGAGGAATCGTATTTGAAGAGGATCAAGACCCGGGTGGTGATTCACGTTTTGTTGCGGTGATACCTAATTGGGGAATCAGTACCACTGGACATTTTTGGGACGTTAACGCCACCCAGCCGTACATTACAAATAATATGTCCGTGCTTGAATTGAACAACTCAGAGTTGTACACGAGTGCACGCCTATCTCCTCTCTCTCTCACATATTATGCACGCTGCTTGGGGAATGGAAATTATACCGTGAAACTTCACTTTTCGGAGATAATAATCAGAGGCAACAAATCTTTTCACAGTTTAGGAAGGCGGATATTTGATGTCTATATTCAGGAGAAACTAGTGTGGAAGGATTTTGACATAAAAAAGGAAGCACAAGGGGTTGATAGGGTAGTCGTTAAGGAACTTAAAGCAGTTCAAGTTAAGGATAAAACTTTACTGATCCGGTTTAAGTGGTCTGGGAAAGGGACAACAACTTCCCCAAAGAGAGGAACATATGGTCCTCTTATATCAGCTATCTCTGTAGACTCTGAGTTCAAGCCTCCAAGTAGCAAAAGCAAAATACCTATTGTGGTTGGAACTTCAGTTGGAGCTTTTGTTGTGTGCCTTATTTTCTTGATTCTTTGGTGGAGAGGCAGTCTTGGTAGCAAGACATCAAGGGAGAAAGTTCTAAGAGGACTGGATCTGCAAACTGGTTTTTTCACCTTCAGGCAAATTAAAGCTGCCACTAACAACTTTGATCCCGAAAACAAAATCGGGGAAGGCGGTTTTGGGTCTGTCTACAAGGGTATATTGTTGGATGGTACTATAATCGCGGTTAAGCAACTATCATCAAAATCAAAGCAAGGAAATCGGGAATTTGTGAATGAAATAGGCATGATATCTGCTTTGCATCATCCAAATCTTGTCAGATTGTATGGATGTTGTATTGAATCAAACCAATTACTGTTGGTATATGAATACATGGAAAATAATAGCCTTGCACATACTTTGTTTGGTCCAGAGGAAGGTCCATTAAAGCTGGACTGGTCTACAAGGCAGAAAATATGCATAGGTATAGCAAGAGGTCTGACTTTTTTGCATGAGGAGTCGCCACTGAAGGTTGTACATAGAGACATTAAAGCTACAAATATATTGCTAGACCAAGACCTCAACGCAAAGATCTCTGACTTTGGTTTGGCCAAGCTTGACGAAGAGGAGAACACTCACATTAGCACCAGAGTTGCTGGAACCATAGGATACATGGCTCCAGAATATGCACTATGGGGTTATTTAACATATAAAGCAGATGTTTACAGCTTTGGTGTAGTTGCATTGGAAATTGTTGCTGGAAAGAACAACATGAAATATCGACCAAATGAGAACTTCGTATGCCTTGTGGATTGGGCTCTTGTTTTACAACAAAAGGGGAACTTAATAGAGCTAGTGGATCCAAGGTTGGGGTCCGATTTTGAAGTGGAAGAGGTGATTACAATGGTCAAGGTAGCTCTCTTATGCATCAATCCAGCCCCAGCTCTCAGGCCGACCATGTCTGCAGTAGTGAGCATGCTTGAAGGACGGACACTTGTTCGTGAATCGGTCATGAACCCAAATATTTACGGCGATGAACTGAAGTTAGCAACCTTGAGAAACCCGTTTGATCCGACTGCACAGGGGGTTACAAGTGGAACTCAGAGCCTTGTTGGTTCATCAGATGCAACATGGGTTAATTCTTCTGCTGCCACGTCCTCAGATCTCTATAAAATTGGTCCTAGTAGTAGTACATCTACTTAG

Protein Analysis

1005

Amino Acids

111.15

Weight (kDa)

7.74

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 152 - 261 3e-10 Leucine-rich repeat region
Malectin PF11721 404 - 587 3.3e-38 Malectin domain
Pkinase PF00069 662 - 869 1.7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 663 - 875 5.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1173
AccB7I CCANNNNNTGG 1 cut(s) 452
AccI GTMKAC 4 cut(s) 880, 1767, 2022, 2273
AccII CGCG 2 cut(s) 385, 2057
AciI CCGC 7 cut(s) 372, 383, 965, 1304, 1552, 2007, 2057
AcoI YGGCCR 1 cut(s) 2421
AcsI RAATTY 4 cut(s) 650, 809, 1185, 2099
AcuI CTGAAG 7 cut(s) 87, 133, 680, 1809, 1933, 2360, 2873
AfiI CCNNNNNNNGG 6 cut(s) 452, 533, 1319, 1730, 2249, 2681
AflIII ACRYGT 1 cut(s) 504
AhlI ACTAGT 1 cut(s) 1582
AjiI CACGTC 1 cut(s) 2967
AjnI CCWGG 3 cut(s) 451, 596, 1176
AjuI GAANNNNNNNTTGG 4 cut(s) 720, 752, 1995, 2027
AloI GAACNNNNNNTCC 4 cut(s) 508, 540, 1726, 1758
Alw21I GWGCWC 2 cut(s) 24, 1429
Alw26I GTCTC 2 cut(s) 1036, 2349
Alw44I GTGCAC 1 cut(s) 1425
Ama87I CYCGRG 1 cut(s) 1279
AoxI GGCC 4 cut(s) 966, 1016, 2421, 2762
ApaLI GTGCAC 1 cut(s) 1425
ApeKI GCWGC 5 cut(s) 592, 1099, 1464, 1964, 2960
ApoI RAATTY 4 cut(s) 650, 809, 1185, 2099
ArsI GACNNNNNNTTYG 2 cut(s) 1370, 1402
AseI ATTAAT 1 cut(s) 848
Asp700I GAANNNNTTC 1 cut(s) 1130
AspS9I GGNCC 9 cut(s) 443, 731, 967, 1016, 1742, 2240, 2252, 2685, 2990
AsuC2I CCSGG 3 cut(s) 358, 1280, 1281
AsuHPI GGTGA 5 cut(s) 346, 1298, 1318, 1936, 2719
AvaI CYCGRG 1 cut(s) 1279
AvaII GGWCC 7 cut(s) 443, 731, 1742, 2240, 2252, 2685, 2990
BaeGI GKGCMC 1 cut(s) 1429
BalI TGGCCA 1 cut(s) 2423
BamHI GGATCC 1 cut(s) 2671
BanI GGYRCC 1 cut(s) 1173
BanII GRGCYC 2 cut(s) 604, 2632
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BauI CACGAG 1 cut(s) 1420
Bbv12I GWGCWC 2 cut(s) 24, 1429
BbvCI CCTCAGC 1 cut(s) 368
BbvI GCAGC 5 cut(s) 579, 1111, 1451, 1951, 2947
BccI CCATC 4 cut(s) 245, 748, 1054, 2036
BceAI ACGGC 2 cut(s) 1351, 2857
BcgI CGANNNNNNTGC 2 cut(s) 2075, 2109
BciT130I CCWGG 3 cut(s) 453, 598, 1178
BciVI GTATCC 1 cut(s) 2474
BcnI CCSGG 3 cut(s) 358, 1280, 1281
BcoDI GTCTC 2 cut(s) 1036, 2349
BcuI ACTAGT 1 cut(s) 1582
BfaI CTAG 7 cut(s) 90, 704, 717, 1583, 2381, 2666, 2994
BfmI CTRYAG 2 cut(s) 1764, 2775
BfuI GTATCC 1 cut(s) 2474
BglII AGATCT 5 cut(s) 292, 922, 1089, 2403, 2974
BisI GCNGC 6 cut(s) 593, 966, 1100, 1465, 1965, 2961
BlsI GCNGC 6 cut(s) 594, 967, 1101, 1466, 1966, 2962
BmcAI AGTACT 2 cut(s) 105, 1208
Bme1390I CCNGG 6 cut(s) 358, 453, 598, 1178, 1280, 1281
Bme18I GGWCC 7 cut(s) 443, 731, 1742, 2240, 2252, 2685, 2990
BmeT110I CYCGRG 1 cut(s) 1279
BmgBI CACGTC 1 cut(s) 2967
BmgT120I GGNCC 9 cut(s) 443, 731, 967, 1016, 1742, 2240, 2252, 2685, 2990
BmiI GGNNCC 6 cut(s) 444, 1175, 2473, 2490, 2673, 2686
BmrFI CCNGG 6 cut(s) 358, 453, 598, 1178, 1280, 1281
BmrI ACTGGG 2 cut(s) 137, 1023
BmsI GCATC 4 cut(s) 174, 2143, 2748, 2926
BmuI ACTGGG 2 cut(s) 137, 1023
BplI GAGNNNNNCTC 2 cut(s) 1193, 1225
BpmI CTGGAG 2 cut(s) 1188, 2475
Bpu10I CCTNAGC 3 cut(s) 368, 528, 776
BpuEI CTTGAG 3 cut(s) 778, 841, 2887
BpuMI CCSGG 3 cut(s) 358, 1280, 1281
BsaBI GATNNNNATC 1 cut(s) 1514
BsaJI CCNNGG 6 cut(s) 451, 596, 597, 727, 1279, 2675
BsaWI WCCGGW 1 cut(s) 1686
BsaXI ACNNNNNCTCC 8 cut(s) 508, 538, 1242, 1272, 1824, 1854, 1864, 1894
Bsc4I CCNNNNNNNGG 6 cut(s) 452, 533, 1319, 1730, 2249, 2681
Bse1I ACTGG 8 cut(s) 132, 661, 1018, 1034, 1339, 1926, 1939, 2273
Bse8I GATNNNNATC 1 cut(s) 1514
BseBI CCWGG 3 cut(s) 453, 598, 1178
BseDI CCNNGG 6 cut(s) 451, 596, 597, 727, 1279, 2675
BseGI GGATG 3 cut(s) 2047, 2137, 2168
BseJI GATNNNNATC 1 cut(s) 1514
BseLI CCNNNNNNNGG 6 cut(s) 452, 533, 1319, 1730, 2249, 2681
BseNI ACTGG 8 cut(s) 132, 661, 1018, 1034, 1339, 1926, 1939, 2273
BseRI GAGGAG 5 cut(s) 871, 1217, 1428, 2342, 2453
BseSI GKGCMC 1 cut(s) 1429
BseXI GCAGC 5 cut(s) 579, 1111, 1451, 1951, 2947
BseYI CCCAGC 2 cut(s) 1362, 2752
BsgI GTGCAG 1 cut(s) 2874
Bsh1236I CGCG 2 cut(s) 385, 2057
BshFI GGCC 4 cut(s) 968, 1018, 2423, 2764
BshNI GGYRCC 1 cut(s) 1173
BsiHKAI GWGCWC 2 cut(s) 24, 1429
BsiHKCI CYCGRG 1 cut(s) 1279
BsiSI CCGG 3 cut(s) 358, 1280, 1687
BslFI GGGAC 4 cut(s) 403, 456, 1361, 1723
BslI CCNNNNNNNGG 6 cut(s) 452, 533, 1319, 1730, 2249, 2681
BsmAI GTCTC 2 cut(s) 1036, 2349
BsmFI GGGAC 4 cut(s) 403, 456, 1361, 1723
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 4 cut(s) 968, 1018, 2423, 2764
BsoBI CYCGRG 1 cut(s) 1279
Bsp1286I GDGCHC 4 cut(s) 24, 604, 1429, 2632
Bsp1407I TGTACA 2 cut(s) 1416, 2347
BspACI CCGC 7 cut(s) 372, 383, 965, 1304, 1552, 2007, 2057
BspANI GGCC 4 cut(s) 968, 1018, 2423, 2764
BspFNI CGCG 2 cut(s) 385, 2057
BspHI TCATGA 2 cut(s) 1035, 2823
BspLI GGNNCC 6 cut(s) 444, 1175, 2473, 2490, 2673, 2686
BspMAI CTGCAG 1 cut(s) 2779
BspT107I GGYRCC 1 cut(s) 1173
BsrGI TGTACA 2 cut(s) 1416, 2347
BsrI ACTGG 8 cut(s) 132, 661, 1018, 1034, 1339, 1926, 1939, 2273
BssECI CCNNGG 6 cut(s) 451, 596, 597, 727, 1279, 2675
BssNAI GTATAC 1 cut(s) 881
BssSI CACGAG 1 cut(s) 1420
BssT1I CCWWGG 2 cut(s) 727, 2675
Bst1107I GTATAC 1 cut(s) 881
Bst2BI CACGAG 1 cut(s) 1420
Bst2UI CCWGG 3 cut(s) 453, 598, 1178
Bst4CI ACNGT 9 cut(s) 58, 226, 427, 520, 1226, 1246, 1489, 1541, 2190
Bst6I CTCTTC 4 cut(s) 1034, 1260, 2430, 2697
BstAUI TGTACA 2 cut(s) 1416, 2347
BstC8I GCNNGC 3 cut(s) 1429, 1462, 2789
BstF5I GGATG 3 cut(s) 2047, 2137, 2168
BstFNI CGCG 2 cut(s) 385, 2057
BstMAI GTCTC 2 cut(s) 1036, 2349
BstMWI GCNNNNNNNGC 1 cut(s) 1015
BstNI CCWGG 3 cut(s) 453, 598, 1178
BstNSI RCATGY 2 cut(s) 508, 2791
BstSCI CCNGG 6 cut(s) 356, 451, 596, 1176, 1278, 1279
BstSFI CTRYAG 2 cut(s) 1764, 2775
BstSLI GKGCMC 1 cut(s) 1429
BstUI CGCG 2 cut(s) 385, 2057
BstV1I GCAGC 5 cut(s) 579, 1111, 1451, 1951, 2947
BstX2I RGATCY 9 cut(s) 292, 708, 922, 1063, 1089, 1924, 2403, 2671, 2974
BstXI CCANNNNNNTGG 1 cut(s) 719
BstYI RGATCY 9 cut(s) 292, 708, 922, 1063, 1089, 1924, 2403, 2671, 2974
BstZ17I GTATAC 1 cut(s) 881
BsuI GTATCC 1 cut(s) 2474
BsuRI GGCC 4 cut(s) 968, 1018, 2423, 2764
BtgZI GCGATG 1 cut(s) 2859
BtrI CACGTC 1 cut(s) 2967
BtsCI GGATG 3 cut(s) 2047, 2137, 2168
BtsI GCAGTG 1 cut(s) 989
BtsIMutI CAGTG 8 cut(s) 222, 654, 790, 989, 1011, 1242, 1332, 2336
Cac8I GCNNGC 3 cut(s) 1429, 1462, 2789
CciI TCATGA 2 cut(s) 1035, 2823
Cfr13I GGNCC 9 cut(s) 443, 731, 967, 1016, 1742, 2240, 2252, 2685, 2990
Cfr9I CCCGGG 1 cut(s) 1279
DraI TTTAAA 1 cut(s) 768
EaeI YGGCCR 1 cut(s) 2421
Eam1104I CTCTTC 4 cut(s) 1034, 1260, 2430, 2697
EarI CTCTTC 4 cut(s) 1034, 1260, 2430, 2697
EciI GGCGGA 1 cut(s) 1567
Eco130I CCWWGG 2 cut(s) 727, 2675
Eco24I GRGCYC 2 cut(s) 604, 2632
Eco32I GATATC 1 cut(s) 2124
Eco47I GGWCC 7 cut(s) 443, 731, 1742, 2240, 2252, 2685, 2990
Eco57I CTGAAG 7 cut(s) 87, 133, 680, 1809, 1933, 2360, 2873
Eco88I CYCGRG 1 cut(s) 1279
EcoRII CCWGG 3 cut(s) 451, 596, 1176
EcoRV GATATC 1 cut(s) 2124
EcoT14I CCWWGG 2 cut(s) 727, 2675
EcoT22I ATGCAT 3 cut(s) 167, 2294, 2741
EcoT38I GRGCYC 2 cut(s) 604, 2632
ErhI CCWWGG 2 cut(s) 727, 2675
FalI AAGNNNNNCTT 4 cut(s) 102, 134, 2639, 2671
FaqI GGGAC 4 cut(s) 403, 456, 1361, 1723
FauNDI CATATG 1 cut(s) 1738
FblI GTMKAC 4 cut(s) 880, 1767, 2022, 2273
Fnu4HI GCNGC 6 cut(s) 593, 966, 1100, 1465, 1965, 2961
FokI GGATG 3 cut(s) 2054, 2124, 2175
FriOI GRGCYC 2 cut(s) 604, 2632
Fsp4HI GCNGC 6 cut(s) 593, 966, 1100, 1465, 1965, 2961
FspBI CTAG 7 cut(s) 90, 704, 717, 1583, 2381, 2666, 2994
GluI GCNGC 6 cut(s) 593, 966, 1100, 1465, 1965, 2961
GsaI CCCAGC 2 cut(s) 1366, 2756
GsuI CTGGAG 2 cut(s) 1188, 2475
HaeIII GGCC 4 cut(s) 968, 1018, 2423, 2764
HapII CCGG 3 cut(s) 358, 1280, 1687
HincII GTYRAC 2 cut(s) 624, 1354
HindII GTYRAC 2 cut(s) 624, 1354
HindIII AAGCTT 2 cut(s) 1138, 2426
HinfI GANTC 9 cut(s) 410, 1254, 1289, 1323, 1769, 1861, 2174, 2330, 2816
HpaI GTTAAC 2 cut(s) 624, 1354
HpaII CCGG 3 cut(s) 358, 1280, 1687
HphI GGTGA 5 cut(s) 346, 1298, 1318, 1936, 2719
Hpy99I CGWCG 1 cut(s) 403
HpyAV CCTTC 8 cut(s) 938, 1542, 1585, 1957, 1997, 2243, 2335, 2789
HpyCH4III ACNGT 9 cut(s) 58, 226, 427, 520, 1226, 1246, 1489, 1541, 2190
HpyCH4IV ACGT 3 cut(s) 1294, 1350, 2966
HpyF10VI GCNNNNNNNGC 1 cut(s) 1015
HpySE526I ACGT 3 cut(s) 1294, 1350, 2966
KspAI GTTAAC 2 cut(s) 624, 1354
LmnI GCTCC 5 cut(s) 91, 245, 858, 1832, 2494
Lsp1109I GCAGC 5 cut(s) 579, 1111, 1451, 1951, 2947
LweI GCATC 4 cut(s) 174, 2143, 2748, 2926
MaeI CTAG 7 cut(s) 90, 704, 717, 1583, 2381, 2666, 2994
MaeII ACGT 3 cut(s) 1294, 1350, 2966
MaeIII GTNAC 3 cut(s) 327, 644, 2899
MboII GAAGA 5 cut(s) 1051, 1277, 2447, 2714, 2946
MfeI CAATTG 2 cut(s) 318, 1121
MflI RGATCY 9 cut(s) 292, 708, 922, 1063, 1089, 1924, 2403, 2671, 2974
MhlI GDGCHC 4 cut(s) 24, 604, 1429, 2632
MlsI TGGCCA 1 cut(s) 2423
MluNI TGGCCA 1 cut(s) 2423
MlyI GAGTC 2 cut(s) 1763, 2339
MmeI TCCRAC 8 cut(s) 267, 387, 920, 1228, 1798, 1810, 2019, 2909
Mox20I TGGCCA 1 cut(s) 2423
Mph1103I ATGCAT 3 cut(s) 167, 2294, 2741
MroXI GAANNNNTTC 1 cut(s) 1130
MscI TGGCCA 1 cut(s) 2423
Msp20I TGGCCA 1 cut(s) 2423
MspA1I CMGCKG 1 cut(s) 372
MspI CCGG 3 cut(s) 358, 1280, 1687
MspR9I CCNGG 6 cut(s) 358, 453, 598, 1178, 1280, 1281
MunI CAATTG 2 cut(s) 318, 1121
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 3 cut(s) 453, 598, 1178
MvnI CGCG 2 cut(s) 385, 2057
MwoI GCNNNNNNNGC 1 cut(s) 1015
NciI CCSGG 3 cut(s) 358, 1280, 1281
NdeI CATATG 1 cut(s) 1738
NlaIV GGNNCC 6 cut(s) 444, 1175, 2473, 2490, 2673, 2686
NsiI ATGCAT 3 cut(s) 167, 2294, 2741
NspI RCATGY 2 cut(s) 508, 2791
PaeI GCATGC 1 cut(s) 2791
PagI TCATGA 2 cut(s) 1035, 2823
PasI CCCWGGG 1 cut(s) 597
PciI ACATGT 1 cut(s) 504
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 1 cut(s) 1130
PfeI GAWTC 7 cut(s) 410, 1254, 1289, 1323, 1861, 2174, 2816
PflFI GACNNNGTC 1 cut(s) 2770
PflMI CCANNNNNTGG 1 cut(s) 452
PkrI GCNGC 6 cut(s) 594, 967, 1101, 1466, 1966, 2962
PleI GAGTC 2 cut(s) 1763, 2338
PpsI GAGTC 2 cut(s) 1763, 2338
PscI ACATGT 1 cut(s) 504
PshBI ATTAAT 1 cut(s) 848
Psp6I CCWGG 3 cut(s) 451, 596, 1176
PspFI CCCAGC 2 cut(s) 1362, 2752
PspGI CCWGG 3 cut(s) 451, 596, 1176
PspN4I GGNNCC 6 cut(s) 444, 1175, 2473, 2490, 2673, 2686
PspPI GGNCC 9 cut(s) 443, 731, 967, 1016, 1742, 2240, 2252, 2685, 2990
PstI CTGCAG 1 cut(s) 2779
PsuI RGATCY 9 cut(s) 292, 708, 922, 1063, 1089, 1924, 2403, 2671, 2974
PsyI GACNNNGTC 1 cut(s) 2770
SatI GCNGC 6 cut(s) 593, 966, 1100, 1465, 1965, 2961
Sau96I GGNCC 9 cut(s) 443, 731, 967, 1016, 1742, 2240, 2252, 2685, 2990
ScaI AGTACT 2 cut(s) 105, 1208
SchI GAGTC 2 cut(s) 1763, 2339
ScrFI CCNGG 6 cut(s) 358, 453, 598, 1178, 1280, 1281
SduI GDGCHC 4 cut(s) 24, 604, 1429, 2632
SfaNI GCATC 4 cut(s) 174, 2143, 2748, 2926
SfcI CTRYAG 2 cut(s) 1764, 2775
SinI GGWCC 7 cut(s) 443, 731, 1742, 2240, 2252, 2685, 2990
SmaI CCCGGG 1 cut(s) 1281
SmlI CTYRAG 3 cut(s) 757, 820, 2866
SmoI CTYRAG 3 cut(s) 757, 820, 2866
SpeI ACTAGT 1 cut(s) 1582
SphI GCATGC 1 cut(s) 2791
SsiI CCGC 7 cut(s) 372, 383, 965, 1304, 1552, 2007, 2057
SspI AATATT 1 cut(s) 2836
SspMI CTAG 7 cut(s) 90, 704, 717, 1583, 2381, 2666, 2994
StyD4I CCNGG 6 cut(s) 356, 451, 596, 1176, 1278, 1279
StyI CCWWGG 2 cut(s) 727, 2675
TaaI ACNGT 9 cut(s) 58, 226, 427, 520, 1226, 1246, 1489, 1541, 2190
TaiI ACGT 3 cut(s) 1297, 1353, 2969
TaqI TCGA 3 cut(s) 398, 743, 2593
TaqII GACCGA 2 cut(s) 632, 2809
TatI WGTACW 6 cut(s) 103, 304, 1206, 1416, 2347, 3002
TauI GCSGC 1 cut(s) 968
TfiI GAWTC 7 cut(s) 410, 1254, 1289, 1323, 1861, 2174, 2816
TscAI CASTG 8 cut(s) 229, 661, 790, 989, 1018, 1249, 1339, 2343
TseI GCWGC 5 cut(s) 592, 1099, 1464, 1964, 2960
TspGWI ACGGA 2 cut(s) 1378, 2815
TspMI CCCGGG 1 cut(s) 1279
TspRI CASTG 8 cut(s) 229, 661, 790, 989, 1018, 1249, 1339, 2343
Tth111I GACNNNGTC 1 cut(s) 2770
Van91I CCANNNNNTGG 1 cut(s) 452
VneI GTGCAC 1 cut(s) 1425
VpaK11BI GGWCC 7 cut(s) 443, 731, 1742, 2240, 2252, 2685, 2990
VspI ATTAAT 1 cut(s) 848
XapI RAATTY 4 cut(s) 650, 809, 1185, 2099
XceI RCATGY 2 cut(s) 508, 2791
XcmI CCANNNNNNNNNTGG 1 cut(s) 2482
XmaI CCCGGG 1 cut(s) 1279
XmiI GTMKAC 4 cut(s) 880, 1767, 2022, 2273
XmnI GAANNNNTTC 1 cut(s) 1130
XspI CTAG 7 cut(s) 90, 704, 717, 1583, 2381, 2666, 2994
ZrmI AGTACT 2 cut(s) 105, 1208
Zsp2I ATGCAT 3 cut(s) 167, 2294, 2741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.