Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Forward (+)

12940659 .. 12947606

Gene Structure 6948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00292720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGACGCCGCTTCGGCGGTGGAAATTATACTTGTGAAGCTTTACTTTTCGGAGATTATAATCAGAGGCAATAGATCTTTTTCTAGTCTTGGAAGACGGATATTCGATGTTTATATTCAGGTAGCCACTCATACCGTTTATGCACTCTATAGGCTACAACGATCTCTCGATTGTTTGCATTTGTTACGGGAGAAGTTAGTGTTGAAGGATTTCGACATTGAAAAGGATGCCCAAGGGGTTGATAAGCCACTCATCCGGGAATTTAAAGCAGTTGAGGTTAAGAAGAAAACTTTAGAGATCCGATTTCATTGGTCCGGGAAAGGGACAACAGCTTCCCCAAATAGAGGAGTATATGGTCCCCTTATTTCAGCTCTCTCTATAGAATCAGAGTTCAAGCCTCCTCATGATAGGAAGACATGGGTATTTATTGTGGTGGGAGCTTCGGTTTTGTGCCTCATTCTGTTGATTTTAAGCATTTTTTGGTGGAGAGGCTGTCCGGATAAGAAGACATCAAGAGAAGAAGCTACGAGAGGACTGGATCTGCAAACAGGCTTTTTCACCTTCAAGCAAATAAAAGCTGCCACTAATAACTTTGATCCTGTAAACAAAATTGGGGAAGGTGGTTTTGGATCTGTGTACAAGGGAATACTACTGGATGGTACTATAATTGCAGTAAAGCAATTATCTGCAAAATCAAAGCAAGGAAATCGAGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTACAGCATCCAAATGTCGTGAGATTGTATGGATGTTGTATTGAAGCAAATCGATTACTTGTGGTATATGAATACATGGAGAACAATAGCCTTGCACATGCTTTGTTTGGTAAGCTTATCATGCCTAGGAACAATATTGAAATCATGTCCGGAGGGAGGTCGGACTGGCCTACGAGGCAGAAAATATGCATAGGCATAGCAAAAGGTTTGGCATTTTTGCATGAGGAATCAGCACCGAAGGTTGTCCACAGAGATATTAAATCTACGAATGTATTACTGGACCAAGACCTTAACGCTAAGATCTCGGACTTTGGTCTGGCCAAGCTTGACGAAGAAGAGAATACCCACATTAGCACCGAGTTGCAGGAACTATGTGGTTCCACGCTTGAGGCTATCGAGCCACATGTTAGGTTGGTTATAGAGGAGCAACATACTGAATACCTATTTAGTGGACTTGAAGACGATGGTGAGGATGATGGTGCAGATCATGGTGAGAATAGCAACGATTCTATTGAAGATGGAAAGTTGAGTTTTGACTATAGACCAAGTAAGCAGGGAATGGAAGTCTCTGCATCAAGGAATTCAATGGAAGTGAAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

448

Amino Acids

50.27

Weight (kDa)

6.0

Isoelectric Point (pI)

39.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	63 - 125	1.4e-08	Malectin domain
Pkinase	PF00069	201 - 374	1.9e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	202 - 367	1.9e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	59
AccIII	TCCGGA	2 cut(s)	496, 893
AciI	CCGC	2 cut(s)	9, 17
AclWI	GGATC	4 cut(s)	292, 546, 590, 637
AcoI	YGGCCR	1 cut(s)	1062
AcsI	RAATTY	3 cut(s)	260, 713, 1324
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	2 cut(s)	638, 661
AfiI	CCNNNNNNNGG	3 cut(s)	321, 344, 900
AflIII	ACRYGT	1 cut(s)	1147
AgsI	TTSAA	9 cut(s)	205, 221, 394, 565, 788, 884, 1202, 1259, 1329
AjuI	GAANNNNNNNTTGG	2 cut(s)	609, 641
AluBI	AGCT	9 cut(s)	40, 332, 371, 440, 524, 578, 859, 1069, 1342
AluI	AGCT	9 cut(s)	40, 332, 371, 440, 524, 578, 859, 1069, 1342
Alw26I	GTCTC	1 cut(s)	1315
AlwI	GGATC	4 cut(s)	292, 546, 590, 637
Aor13HI	TCCGGA	2 cut(s)	496, 893
AoxI	GGCC	2 cut(s)	911, 1062
ApeKI	GCWGC	1 cut(s)	578
ApoI	RAATTY	3 cut(s)	260, 713, 1324
Asp700I	GAANNNNTTC	1 cut(s)	209
AspA2I	CCTAGG	1 cut(s)	869
AspS9I	GGNCC	3 cut(s)	312, 356, 1024
AsuC2I	CCSGG	2 cut(s)	257, 316
AsuHPI	GGTGA	3 cut(s)	550, 1223, 1247
AvaII	GGWCC	3 cut(s)	312, 356, 1024
AvrII	CCTAGG	1 cut(s)	869
BalI	TGGCCA	1 cut(s)	1064
BbsI	GAAGAC	4 cut(s)	100, 419, 512, 1209
BbvI	GCAGC	1 cut(s)	565
BccI	CCATC	4 cut(s)	650, 1202, 1214, 1256
BcgI	CGANNNNNNTGC	2 cut(s)	689, 723
BcnI	CCSGG	2 cut(s)	257, 316
BcoDI	GTCTC	1 cut(s)	1315
BfaI	CTAG	2 cut(s)	84, 870
BfmI	CTRYAG	3 cut(s)	148, 378, 1282
BglI	GCCNNNNNGGC	2 cut(s)	14, 919
BglII	AGATCT	2 cut(s)	74, 1044
BisI	GCNGC	2 cut(s)	9, 579
BlnI	CCTAGG	1 cut(s)	869
BlsI	GCNGC	2 cut(s)	10, 580
Bme1390I	CCNGG	2 cut(s)	257, 316
Bme18I	GGWCC	3 cut(s)	312, 356, 1024
BmgT120I	GGNCC	3 cut(s)	312, 356, 1024
BmiI	GGNNCC	2 cut(s)	358, 1123
BmrFI	CCNGG	2 cut(s)	257, 316
BmsI	GCATC	3 cut(s)	217, 760, 1325
BoxI	GACNNNNGTC	1 cut(s)	1056
BpiI	GAAGAC	4 cut(s)	100, 419, 512, 1209
BpuEI	CTTGAG	1 cut(s)	1151
BpuMI	CCSGG	2 cut(s)	257, 316
Bsa29I	ATCGAT	1 cut(s)	796
BsaBI	GATNNNNATC	1 cut(s)	59
BsaHI	GRCGYC	1 cut(s)	6
BsaJI	CCNNGG	2 cut(s)	232, 869
BsaWI	WCCGGW	2 cut(s)	496, 893
BsaXI	ACNNNNNCTCC	4 cut(s)	429, 459, 478, 508
Bsc4I	CCNNNNNNNGG	3 cut(s)	321, 344, 900
Bse1I	ACTGG	4 cut(s)	540, 657, 914, 1026
Bse8I	GATNNNNATC	1 cut(s)	59
BseAI	TCCGGA	2 cut(s)	496, 893
BseCI	ATCGAT	1 cut(s)	796
BseDI	CCNNGG	2 cut(s)	232, 869
BseGI	GGATG	6 cut(s)	232, 252, 661, 751, 782, 1222
BseJI	GATNNNNATC	1 cut(s)	59
BseLI	CCNNNNNNNGG	3 cut(s)	321, 344, 900
BseNI	ACTGG	4 cut(s)	540, 657, 914, 1026
BseRI	GAGGAG	3 cut(s)	360, 390, 1181
BseXI	GCAGC	1 cut(s)	565
BsgI	GTGCAG	1 cut(s)	1245
BshFI	GGCC	2 cut(s)	913, 1064
BshVI	ATCGAT	1 cut(s)	796
BsiSI	CCGG	4 cut(s)	256, 315, 497, 894
BslFI	GGGAC	2 cut(s)	337, 342
BslI	CCNNNNNNNGG	3 cut(s)	321, 344, 900
BsmAI	GTCTC	1 cut(s)	1315
BsmFI	GGGAC	2 cut(s)	337, 342
BsnI	GGCC	2 cut(s)	913, 1064
Bsp13I	TCCGGA	2 cut(s)	496, 893
Bsp1407I	TGTACA	1 cut(s)	636
Bsp143I	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
BspACI	CCGC	2 cut(s)	9, 17
BspANI	GGCC	2 cut(s)	913, 1064
BspDI	ATCGAT	1 cut(s)	796
BspEI	TCCGGA	2 cut(s)	496, 893
BspHI	TCATGA	1 cut(s)	403
BspLI	GGNNCC	2 cut(s)	358, 1123
BspPI	GGATC	4 cut(s)	292, 546, 590, 637
BsrGI	TGTACA	1 cut(s)	636
BsrI	ACTGG	4 cut(s)	540, 657, 914, 1026
BssECI	CCNNGG	2 cut(s)	232, 869
BssMI	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	2 cut(s)	232, 869
Bst4CI	ACNGT	1 cut(s)	136
Bst6I	CTCTTC	1 cut(s)	1074
BstACI	GRCGYC	1 cut(s)	6
BstAUI	TGTACA	1 cut(s)	636
BstDEI	CTNAG	1 cut(s)	1041
BstF5I	GGATG	6 cut(s)	232, 252, 661, 751, 782, 1222
BstKTI	GATC	8 cut(s)	77, 164, 300, 541, 598, 632, 1047, 1231
BstMAI	GTCTC	1 cut(s)	1315
BstMBI	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 865, 919
BstNSI	RCATGY	2 cut(s)	845, 1151
BstPAI	GACNNNNGTC	1 cut(s)	1056
BstSCI	CCNGG	2 cut(s)	255, 314
BstSFI	CTRYAG	3 cut(s)	148, 378, 1282
BstV1I	GCAGC	1 cut(s)	565
BstV2I	GAAGAC	4 cut(s)	100, 419, 512, 1209
BstX2I	RGATCY	5 cut(s)	74, 297, 538, 629, 1044
BstYI	RGATCY	5 cut(s)	74, 297, 538, 629, 1044
Bsu15I	ATCGAT	1 cut(s)	796
BsuRI	GGCC	2 cut(s)	913, 1064
BsuTUI	ATCGAT	1 cut(s)	796
BtsCI	GGATG	6 cut(s)	232, 252, 661, 751, 782, 1222
CciI	TCATGA	1 cut(s)	403
Cfr13I	GGNCC	3 cut(s)	312, 356, 1024
ClaI	ATCGAT	1 cut(s)	796
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	2 cut(s)	637, 660
CviQI	GTAC	2 cut(s)	637, 660
DdeI	CTNAG	1 cut(s)	1041
DpnI	GATC	8 cut(s)	76, 163, 299, 540, 597, 631, 1046, 1230
DpnII	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
DraI	TTTAAA	1 cut(s)	265
EaeI	YGGCCR	1 cut(s)	1062
Eam1104I	CTCTTC	1 cut(s)	1074
EarI	CTCTTC	1 cut(s)	1074
Eco130I	CCWWGG	2 cut(s)	232, 869
Eco47I	GGWCC	3 cut(s)	312, 356, 1024
EcoRI	GAATTC	1 cut(s)	1324
EcoT14I	CCWWGG	2 cut(s)	232, 869
EcoT22I	ATGCAT	1 cut(s)	935
ErhI	CCWWGG	2 cut(s)	232, 869
FalI	AAGNNNNNCTT	2 cut(s)	29, 61
FaqI	GGGAC	2 cut(s)	337, 342
Fnu4HI	GCNGC	2 cut(s)	9, 579
FokI	GGATG	6 cut(s)	239, 239, 668, 738, 789, 1229
Fsp4HI	GCNGC	2 cut(s)	9, 579
FspBI	CTAG	2 cut(s)	84, 870
GluI	GCNGC	2 cut(s)	9, 579
HaeIII	GGCC	2 cut(s)	913, 1064
HapII	CCGG	4 cut(s)	256, 315, 497, 894
HgaI	GACGC	1 cut(s)	14
Hin1I	GRCGYC	1 cut(s)	6
HindIII	AAGCTT	3 cut(s)	38, 857, 1067
HinfI	GANTC	3 cut(s)	383, 971, 1250
HpaII	CCGG	4 cut(s)	256, 315, 497, 894
HphI	GGTGA	3 cut(s)	550, 1223, 1247
Hpy166II	GTNNAC	6 cut(s)	604, 637, 721, 746, 991, 1196
Hpy188I	TCNGA	6 cut(s)	52, 65, 302, 388, 907, 1051
Hpy188III	TCNNGA	7 cut(s)	167, 404, 497, 513, 710, 763, 894
Hpy8I	GTNNAC	6 cut(s)	604, 637, 721, 746, 991, 1196
HpyAV	CCTTC	4 cut(s)	199, 571, 611, 976
HpyCH4III	ACNGT	1 cut(s)	136
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 865, 919
HpyF3I	CTNAG	1 cut(s)	1041
Hsp92I	GRCGYC	1 cut(s)	6
Kpn2I	TCCGGA	2 cut(s)	496, 893
Kzo9I	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
LmnI	GCTCC	2 cut(s)	437, 1168
Lsp1109I	GCAGC	1 cut(s)	565
LweI	GCATC	3 cut(s)	217, 760, 1325
MaeI	CTAG	2 cut(s)	84, 870
MaeIII	GTNAC	1 cut(s)	183
MalI	GATC	8 cut(s)	76, 163, 299, 540, 597, 631, 1046, 1230
MboI	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
MboII	GAAGA	9 cut(s)	105, 295, 424, 517, 530, 1088, 1091, 1214, 1271
MflI	RGATCY	5 cut(s)	74, 297, 538, 629, 1044
MlsI	TGGCCA	1 cut(s)	1064
MluCI	AATT	7 cut(s)	24, 260, 609, 666, 680, 713, 1324
MluNI	TGGCCA	1 cut(s)	1064
MmeI	TCCRAC	1 cut(s)	885
Mox20I	TGGCCA	1 cut(s)	1064
Mph1103I	ATGCAT	1 cut(s)	935
MroI	TCCGGA	2 cut(s)	496, 893
MroXI	GAANNNNTTC	1 cut(s)	209
MscI	TGGCCA	1 cut(s)	1064
MseI	TTAA	5 cut(s)	264, 279, 470, 1002, 1035
MslI	CAYNNNNRTG	1 cut(s)	756
Msp20I	TGGCCA	1 cut(s)	1064
MspI	CCGG	4 cut(s)	256, 315, 497, 894
MspR9I	CCNGG	2 cut(s)	257, 316
MwoI	GCNNNNNNNGC	3 cut(s)	14, 865, 919
NciI	CCSGG	2 cut(s)	257, 316
NdeII	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
NlaIV	GGNNCC	2 cut(s)	358, 1123
NsiI	ATGCAT	1 cut(s)	935
NspI	RCATGY	2 cut(s)	845, 1151
PagI	TCATGA	1 cut(s)	403
PciI	ACATGT	1 cut(s)	1147
PdmI	GAANNNNTTC	1 cut(s)	209
PfeI	GAWTC	3 cut(s)	383, 971, 1250
PfoI	TCCNGGA	2 cut(s)	255, 314
PkrI	GCNGC	2 cut(s)	10, 580
PscI	ACATGT	1 cut(s)	1147
PshAI	GACNNNNGTC	1 cut(s)	1056
PsiI	TTATAA	1 cut(s)	59
PspN4I	GGNNCC	2 cut(s)	358, 1123
PspPI	GGNCC	3 cut(s)	312, 356, 1024
PsuI	RGATCY	5 cut(s)	74, 297, 538, 629, 1044
RsaI	GTAC	2 cut(s)	638, 661
RsaNI	GTAC	2 cut(s)	637, 660
RseI	CAYNNNNRTG	1 cut(s)	756
SaqAI	TTAA	5 cut(s)	264, 279, 470, 1002, 1035
SatI	GCNGC	2 cut(s)	9, 579
Sau3AI	GATC	8 cut(s)	74, 161, 297, 538, 595, 629, 1044, 1228
Sau96I	GGNCC	3 cut(s)	312, 356, 1024
ScrFI	CCNGG	2 cut(s)	257, 316
SfaNI	GCATC	3 cut(s)	217, 760, 1325
SfcI	CTRYAG	3 cut(s)	148, 378, 1282
SinI	GGWCC	3 cut(s)	312, 356, 1024
SmiMI	CAYNNNNRTG	1 cut(s)	756
SmlI	CTYRAG	1 cut(s)	1130
SmoI	CTYRAG	1 cut(s)	1130
Sse9I	AATT	7 cut(s)	24, 260, 609, 666, 680, 713, 1324
SsiI	CCGC	2 cut(s)	9, 17
SspI	AATATT	1 cut(s)	880
SspMI	CTAG	2 cut(s)	84, 870
StyD4I	CCNGG	2 cut(s)	255, 314
StyI	CCWWGG	2 cut(s)	232, 869
TaaI	ACNGT	1 cut(s)	136
TaqI	TCGA	6 cut(s)	105, 168, 213, 709, 796, 1140
TasI	AATT	7 cut(s)	24, 260, 609, 666, 680, 713, 1324
TatI	WGTACW	1 cut(s)	636
TauI	GCSGC	1 cut(s)	11
TfiI	GAWTC	3 cut(s)	383, 971, 1250
Tru1I	TTAA	5 cut(s)	264, 279, 470, 1002, 1035
Tru9I	TTAA	5 cut(s)	264, 279, 470, 1002, 1035
TseI	GCWGC	1 cut(s)	578
TspDTI	ATGAA	2 cut(s)	296, 828
TspGWI	ACGGA	1 cut(s)	112
VpaK11BI	GGWCC	3 cut(s)	312, 356, 1024
XapI	RAATTY	3 cut(s)	260, 713, 1324
XceI	RCATGY	2 cut(s)	845, 1151
XmaJI	CCTAGG	1 cut(s)	869
XmnI	GAANNNNTTC	1 cut(s)	209
XspI	CTAG	2 cut(s)	84, 870
Zsp2I	ATGCAT	1 cut(s)	935

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.