FvH4_3g06960

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
4061664 .. 4076451
14788 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g06960.t1

Sequence Viewer

Length: 3084 bp
ATGGCAATCAGAGTCGTCGGAGTTCGTCTTCCTCATAATAGTGTCGGGAAAACCATCATGAACCTCAATAACTTGGTGGTTATCATACTGCTGGTTATCTGCAGTTTTGGATCAGCCATCAAAGTTGAAGCTCTTTCAACTCGTCTTCCTGCTACTGAAGTGGAAGCCCTACGAGAAATTGGTAAAGAACTAGGAAAAAATGACTGGAACTTCAGCGTAGACCCGTGCCTGAATGACACAACCCACACAAGCTGGGCTACTCCAAAGCCTGCTGATAGGCCTCAATTCAACAACACTCTCATCTGCAACTGCTCCTTCCCTGATGACTCATGCCATGTTATCAACATTTTTCTTAAAGGGCAAGATCTTGCTGGGGTTCTTCCACCGTCTGTTGCAAAGTTACCTTACCTTACACAAATCGATTTCTCAAGGAACTTCATCAGTGGCAATATACCGAGTGAATGGGCTTCTACAAAGTTGGAATTAATGTACCTCGGTGTGAACAACTTATCTGGACCAATCCCTGCCTTCCTAGGAAACATTACCACTCTAAGAAACTTGAGTCTGGAGACAAACATGTTTTCTGGAATTGTTCCTCCAGAGATTGGGAAGTTGGTTAACTTGCAGATTCTCGTCATTAGTGCAAACAATCTCACAGGAGTCTTACCAGTGGATCTCACAAACCTGACCAAATTAATAGAACTGAGGATTAGCAGTAACAACTTCAGAGGAAGAATTCCCGATTTTTTCCGAAGTTGGAGTCAACTTAATGAACTAGAGATCCAAGCTAGTGGTCTACAAGGCCCCATTCCGTCTAGCATTTCTGTCTTGAGTAATTTAACAGAACTAAGGATCAGCGACTTAAACGGAGGGGGTTCAGAATTTCCAGACCTGACTAATATGAAAAGCATGAAAAGATTAATGCTAAGGAGCTGTAATTTATCTGGACCTATTCCTGATTTAAAAGCAATGCCAGTATTGAATATATTAGATCTCAGCTTCAACAGATTGGAAGGAAGCTTTCCTGACGTTGAAGCTATGAATGTGCAGTACTTGTACCTGACAAGCAACTTGCTCAATGGCTCTATTCCAGAATATATTAAGACCAAAGATCCCCGCTACCAGATAGATGTTTCTTACAATAATTTTTCCAAGGACTCTGAGCCATCTGCATGTAGCGAAAACCTGAACGTCTTCAAAAGCTCTTCTGCAGCAAACAACTCAGTATCTGGAGTGTGCCTGGAGAAATATCCATGTAAAGAAGTTCAGTACTCGTTACATATAAATTGTGGTGGAGGAGCGACAACTATTGGAGGAGTCAATTACGAAGATGATACAGATCTTGGAGGTGGAGCAAAATTTGTTCCAGTGAGATCCAACTGGGGAACCAGTAGCACTGGAATATTCTGGGATACTAATGTCACCGCTGGAGACTACATAGCCAAAAATGTATCAACACTCGGAATGAAAAACTCTCAGTTGTACATGAATGCACGCCTCAGTCCTCTTTCTCTCACGTATTATGCAAACTGCTTAGCACAAGGAAACTATACTGTGAGCCTTCACTTTGCGGAGATAATAATCCGAGGCAATAAATCTTATCAAAGTGTTGGAAGACGGATATTTGATGTATATATTCAGGAGAAACTCGTATTAAAGGATTTTGACATCGTAAAGGAAGAAAAAGGTGTTGATAAAGAAGTCATTAAAGAGACAAAGGCAGTTCAGGTTAAGAATAAAACTCTAGAGATTCGGTTTCATTGGTCTGGAAAAGGGACAACAGCTTCCCCAAGGAGAGGAATATATGGTCCCCTTATATCAGCCATTTCTATAGAATCTGAGTTCAAGCATTCCAAAAGAAATATGCATGTTGTGGTTGGAGTTTCAGTTGGAGCTTCAATTTTGTGCCTTGTCTTCTTAATTTTTGGCATTCTTTGGTGGAGAGGTTGTCTGGTGGATAGCCAGACATCAAGGGAAAAAGTTCTGAGAGGAATGGATCTGCAGACTGGCTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCCTTCAAACAAAATTGGAGAGGGTGGTTTTGGGCCCGTCTACAAGGGTATACTATTGGATGGTACTATAATTGCAGTTAAGCAACTATCCTCAAAATCGAAGCAGGGAAATCGTGAATTTGTGAACGAAATAGGCATGATCTCTTGTTTGCGGCATCCAAATCTGGTTAGATTGTATGGATGTTGTATTGAAGCTAACCAGTTATTGTTGGTATATGAGTACTTGGAAAACAACAGCCTTGCTCGCGCTTTGTACGGTCCAGAGGATGATTCCCTAAACTTGGACTGGCCTACAAGGCACAAAATATGCCTAGACATAGCAAAAGGTCTGGCTTACTTGCATGAGGAATCGGCAGTGAAGGTTGTACATAGAGACATCAAAACTACGAATGTGCTACTGGACCAAGACCTCAATGCTAAGATCTCAGATTTTGGTTTGGCCAGGCTTGACGAAGAGGAGAAGACTCACATTAGCACCAAGGTTGCTGGAACTATAGGATACATGGCACCGGAATATGCGCTATGGGGTTGCTTGACCTACAAGGCAGATGTCTACAGTTTTGGAGTTGTTGCATTAGAAACTGTTTCAGGAAAGAACAACATGAAATATCGACCGCATGAGAACATTCAATGTCTTATGGATTGGGCCCATGTTTTGCATAAAAAAGGGAACTTACTGGAGCTGGTGGATCCGAGGTTGGGATCCGATTTCAATAAGAAAGAGGCGCTTAGAACTATCAAAGTAGCTCTACTATGCGCCAATCCAACAGCTGCACTCAGGCCTATCATGTCTGCAGTAGTGAGTATGCTTGAAGGGCGAACCCCAGTGGATGAAGTGGCTTTGGATCCAAGTATCCATGGTGATGAAATGACAAGGTTAAGAGCCTTTGAAAACCTGTCTGAGCAGAATGCACAAGGGATCAGCTCAACAAGTGAAAGTCACAGCCTCGTGCATTCATCAAATGCACCATGGACTGGTTCTTCTGATACTACTACGTCTTCAGATCTCTATAAAGTTTATTCAAGTTAA

Protein Analysis

1028

Amino Acids

113.26

Weight (kDa)

6.7

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 178 - 316 5.6e-12 Leucine-rich repeat region
Malectin PF11721 425 - 609 1.5e-38 Malectin domain
Pkinase PF00069 687 - 892 4.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 688 - 892 5.5e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2560
AccB7I CCANNNNNTGG 2 cut(s) 605, 3029
AccI GTMKAC 5 cut(s) 219, 796, 2094, 2104, 2607
AccII CGCG 1 cut(s) 2301
AciI CCGC 5 cut(s) 1117, 1425, 1571, 2206, 2669
AcoI YGGCCR 1 cut(s) 2493
AcsI RAATTY 4 cut(s) 735, 881, 1358, 2171
AcuI CTGAAG 4 cut(s) 177, 196, 709, 3039
AfaI GTAC 9 cut(s) 491, 1052, 1058, 1271, 1484, 2119, 2276, 2309, 2421
AfiI CCNNNNNNNGG 5 cut(s) 605, 1796, 2335, 2753, 3029
AflIII ACRYGT 1 cut(s) 576
AjnI CCWGG 2 cut(s) 1239, 2495
AloI GAACNNNNNNTCC 2 cut(s) 765, 797
Alw26I GTCTC 4 cut(s) 563, 1425, 1706, 2421
AlwNI CAGNNNCTG 1 cut(s) 1229
AoxI GGCC 7 cut(s) 278, 802, 2087, 2342, 2493, 2700, 2834
ApaI GGGCCC 2 cut(s) 2091, 2704
ApeKI GCWGC 3 cut(s) 1211, 2036, 2825
ApoI RAATTY 4 cut(s) 735, 881, 1358, 2171
ArsI GACNNNNNNTTYG 2 cut(s) 745, 777
AseI ATTAAT 3 cut(s) 485, 695, 920
Asp700I GAANNNNTTC 2 cut(s) 1193, 1980
AspA2I CCTAGG 1 cut(s) 532
AspLEI GCGC 4 cut(s) 2303, 2575, 2782, 2813
AsuHPI GGTGA 3 cut(s) 1414, 2008, 2927
AvaII GGWCC 5 cut(s) 515, 947, 1808, 2312, 2455
AvrII CCTAGG 1 cut(s) 532
BaeGI GKGCMC 2 cut(s) 2091, 2704
BaeI ACNNNNGTAYC 2 cut(s) 1404, 1437
BalI TGGCCA 1 cut(s) 2495
BamHI GGATCC 3 cut(s) 2743, 2756, 2899
BanI GGYRCC 1 cut(s) 2560
BanII GRGCYC 2 cut(s) 2091, 2704
BauI CACGAG 1 cut(s) 3002
BbsI GAAGAC 7 cut(s) 20, 137, 1186, 1621, 1906, 2522, 3045
BbvI GCAGC 3 cut(s) 1223, 2023, 2812
BccI CCATC 4 cut(s) 62, 125, 1174, 2108
BcgI CGANNNNNNTGC 2 cut(s) 2147, 2181
BciT130I CCWGG 2 cut(s) 1241, 2497
BciVI GTATCC 3 cut(s) 1405, 2546, 2918
BcoDI GTCTC 4 cut(s) 563, 1425, 1706, 2421
BfaI CTAG 7 cut(s) 191, 533, 776, 789, 816, 1745, 2366
BfmI CTRYAG 7 cut(s) 100, 1209, 1830, 2000, 2547, 2608, 2847
BfoI RGCGCY 1 cut(s) 2783
BfuI GTATCC 3 cut(s) 1405, 2546, 2918
BglI GCCNNNNNGGC 1 cut(s) 2350
BglII AGATCT 5 cut(s) 364, 991, 1339, 2475, 3058
BisI GCNGC 4 cut(s) 1212, 2037, 2207, 2826
BlnI CCTAGG 1 cut(s) 532
BlpI GCTNAGC 1 cut(s) 1534
BlsI GCNGC 4 cut(s) 1213, 2038, 2208, 2827
BmcAI AGTACT 3 cut(s) 1052, 1271, 2276
Bme1390I CCNGG 2 cut(s) 1241, 2497
Bme18I GGWCC 5 cut(s) 515, 947, 1808, 2312, 2455
BmiI GGNNCC 9 cut(s) 805, 1387, 1810, 2089, 2562, 2702, 2745, 2758, 2901
BmrFI CCNGG 2 cut(s) 1241, 2497
BmrI ACTGGG 2 cut(s) 1390, 2873
BmsI GCATC 1 cut(s) 2218
BmuI ACTGGG 2 cut(s) 1390, 2873
BpiI GAAGAC 7 cut(s) 20, 137, 1186, 1621, 1906, 2522, 3045
BpmI CTGGAG 6 cut(s) 582, 587, 1251, 1262, 1449, 2753
Bpu10I CCTNAGC 1 cut(s) 926
Bpu1102I GCTNAGC 1 cut(s) 1534
BpuEI CTTGAG 4 cut(s) 412, 580, 850, 2041
Bsa29I ATCGAT 1 cut(s) 420
BsaAI YACGTR 1 cut(s) 1518
BsaBI GATNNNNATC 2 cut(s) 1338, 1580
BsaJI CCNNGG 9 cut(s) 493, 532, 1152, 1585, 1790, 2532, 2747, 2911, 3023
BsaWI WCCGGW 1 cut(s) 2563
BsaXI ACNNNNNCTCC 4 cut(s) 1872, 1902, 1933, 1963
Bsc4I CCNNNNNNNGG 5 cut(s) 605, 1796, 2335, 2753, 3029
Bse3DI GCAATG 1 cut(s) 975
Bse8I GATNNNNATC 2 cut(s) 1338, 1580
BseBI CCWGG 2 cut(s) 1241, 2497
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 9 cut(s) 493, 532, 1152, 1585, 1790, 2532, 2747, 2911, 3023
BseGI GGATG 5 cut(s) 2119, 2209, 2240, 2326, 2890
BseJI GATNNNNATC 2 cut(s) 1338, 1580
BseLI CCNNNNNNNGG 5 cut(s) 605, 1796, 2335, 2753, 3029
BseMI GCAATG 1 cut(s) 975
BseRI GAGGAG 3 cut(s) 1311, 1329, 2525
BseSI GKGCMC 2 cut(s) 2091, 2704
BseXI GCAGC 3 cut(s) 1223, 2023, 2812
BseYI CCCAGC 2 cut(s) 252, 371
BsgI GTGCAG 2 cut(s) 1067, 2811
Bsh1236I CGCG 1 cut(s) 2301
Bsh1285I CGRYCG 1 cut(s) 2669
BshFI GGCC 7 cut(s) 280, 804, 2089, 2344, 2495, 2702, 2836
BshNI GGYRCC 1 cut(s) 2560
BshVI ATCGAT 1 cut(s) 420
BsiEI CGRYCG 1 cut(s) 2669
BsiSI CCGG 1 cut(s) 2564
BslFI GGGAC 2 cut(s) 1789, 1794
BslI CCNNNNNNNGG 5 cut(s) 605, 1796, 2335, 2753, 3029
BsmAI GTCTC 4 cut(s) 563, 1425, 1706, 2421
BsmFI GGGAC 2 cut(s) 1789, 1794
BsmI GAATGC 5 cut(s) 1495, 1849, 1929, 2968, 3007
BsnI GGCC 7 cut(s) 280, 804, 2089, 2344, 2495, 2702, 2836
Bsp120I GGGCCC 2 cut(s) 2087, 2700
Bsp1286I GDGCHC 2 cut(s) 2091, 2704
Bsp1407I TGTACA 2 cut(s) 1482, 2419
Bsp1720I GCTNAGC 1 cut(s) 1534
Bsp19I CCATGG 2 cut(s) 2911, 3023
BspACI CCGC 5 cut(s) 1117, 1425, 1571, 2206, 2669
BspANI GGCC 7 cut(s) 280, 804, 2089, 2344, 2495, 2702, 2836
BspDI ATCGAT 1 cut(s) 420
BspFNI CGCG 1 cut(s) 2301
BspHI TCATGA 1 cut(s) 57
BspLI GGNNCC 9 cut(s) 805, 1387, 1810, 2089, 2562, 2702, 2745, 2758, 2901
BspMAI CTGCAG 4 cut(s) 104, 1213, 2004, 2851
BspQI GCTCTTC 1 cut(s) 1210
BspT107I GGYRCC 1 cut(s) 2560
BsrDI GCAATG 1 cut(s) 975
BsrGI TGTACA 2 cut(s) 1482, 2419
BssECI CCNNGG 9 cut(s) 493, 532, 1152, 1585, 1790, 2532, 2747, 2911, 3023
BssNAI GTATAC 1 cut(s) 2105
BssSI CACGAG 1 cut(s) 3002
BssT1I CCWWGG 6 cut(s) 532, 1152, 1790, 2532, 2911, 3023
Bst1107I GTATAC 1 cut(s) 2105
Bst2BI CACGAG 1 cut(s) 3002
Bst2UI CCWGG 2 cut(s) 1241, 2497
Bst4CI ACNGT 5 cut(s) 387, 1555, 2312, 2612, 2638
Bst6I CTCTTC 2 cut(s) 1210, 2502
BstAUI TGTACA 2 cut(s) 1482, 2419
BstBAI YACGTR 1 cut(s) 1518
BstC8I GCNNGC 3 cut(s) 270, 1495, 2299
BstDSI CCRYGG 2 cut(s) 2911, 3023
BstF5I GGATG 5 cut(s) 2119, 2209, 2240, 2326, 2890
BstFNI CGCG 1 cut(s) 2301
BstH2I RGCGCY 1 cut(s) 2783
BstHHI GCGC 4 cut(s) 2303, 2575, 2782, 2813
BstMAI GTCTC 4 cut(s) 563, 1425, 1706, 2421
BstMCI CGRYCG 1 cut(s) 2669
BstMWI GCNNNNNNNGC 3 cut(s) 2298, 2350, 2869
BstNI CCWGG 2 cut(s) 1241, 2497
BstNSI RCATGY 3 cut(s) 580, 1176, 1871
BstSCI CCNGG 2 cut(s) 1239, 2495
BstSFI CTRYAG 7 cut(s) 100, 1209, 1830, 2000, 2547, 2608, 2847
BstSLI GKGCMC 2 cut(s) 2091, 2704
BstUI CGCG 1 cut(s) 2301
BstV1I GCAGC 3 cut(s) 1223, 2023, 2812
BstV2I GAAGAC 7 cut(s) 20, 137, 1186, 1621, 1906, 2522, 3045
BstXI CCANNNNNNTGG 1 cut(s) 791
BstZ17I GTATAC 1 cut(s) 2105
Bsu15I ATCGAT 1 cut(s) 420
BsuI GTATCC 3 cut(s) 1405, 2546, 2918
BsuRI GGCC 7 cut(s) 280, 804, 2089, 2344, 2495, 2702, 2836
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 2 cut(s) 2911, 3023
BtsCI GGATG 5 cut(s) 2119, 2209, 2240, 2326, 2890
BtsI GCAGTG 1 cut(s) 2415
BtsIMutI CAGTG 6 cut(s) 448, 675, 1374, 1395, 2415, 2886
Cac8I GCNNGC 3 cut(s) 270, 1495, 2299
CaiI CAGNNNCTG 1 cut(s) 1229
CciI TCATGA 1 cut(s) 57
CfoI GCGC 4 cut(s) 2303, 2575, 2782, 2813
ClaI ATCGAT 1 cut(s) 420
Csp6I GTAC 9 cut(s) 490, 1051, 1057, 1270, 1483, 2118, 2275, 2308, 2420
CviQI GTAC 9 cut(s) 490, 1051, 1057, 1270, 1483, 2118, 2275, 2308, 2420
DraI TTTAAA 1 cut(s) 963
EaeI YGGCCR 1 cut(s) 2493
Eam1104I CTCTTC 2 cut(s) 1210, 2502
EarI CTCTTC 2 cut(s) 1210, 2502
Eco130I CCWWGG 6 cut(s) 532, 1152, 1790, 2532, 2911, 3023
Eco147I AGGCCT 2 cut(s) 280, 2836
Eco24I GRGCYC 2 cut(s) 2091, 2704
Eco47I GGWCC 5 cut(s) 515, 947, 1808, 2312, 2455
Eco57I CTGAAG 4 cut(s) 177, 196, 709, 3039
EcoO109I RGGNCCY 1 cut(s) 803
EcoRI GAATTC 1 cut(s) 735
EcoRII CCWGG 2 cut(s) 1239, 2495
EcoT14I CCWWGG 6 cut(s) 532, 1152, 1790, 2532, 2911, 3023
EcoT22I ATGCAT 1 cut(s) 1869
EcoT38I GRGCYC 2 cut(s) 2091, 2704
ErhI CCWWGG 6 cut(s) 532, 1152, 1790, 2532, 2911, 3023
FalI AAGNNNNNCTT 2 cut(s) 2766, 2798
FaqI GGGAC 2 cut(s) 1789, 1794
FauI CCCGC 1 cut(s) 1124
FblI GTMKAC 5 cut(s) 219, 796, 2094, 2104, 2607
Fnu4HI GCNGC 4 cut(s) 1212, 2037, 2207, 2826
FokI GGATG 5 cut(s) 2126, 2196, 2247, 2333, 2897
FriOI GRGCYC 2 cut(s) 2091, 2704
Fsp4HI GCNGC 4 cut(s) 1212, 2037, 2207, 2826
FspBI CTAG 7 cut(s) 191, 533, 776, 789, 816, 1745, 2366
GlaI GCGC 4 cut(s) 2302, 2574, 2781, 2812
GluI GCNGC 4 cut(s) 1212, 2037, 2207, 2826
GsaI CCCAGC 2 cut(s) 256, 375
GsuI CTGGAG 6 cut(s) 582, 587, 1251, 1262, 1449, 2753
HaeII RGCGCY 1 cut(s) 2783
HaeIII GGCC 7 cut(s) 280, 804, 2089, 2344, 2495, 2702, 2836
HapII CCGG 1 cut(s) 2564
HhaI GCGC 4 cut(s) 2303, 2575, 2782, 2813
Hin6I GCGC 4 cut(s) 2301, 2573, 2780, 2811
HinP1I GCGC 4 cut(s) 2301, 2573, 2780, 2811
HincII GTYRAC 2 cut(s) 619, 764
HindII GTYRAC 2 cut(s) 619, 764
HindIII AAGCTT 1 cut(s) 1018
HpaI GTTAAC 1 cut(s) 619
HpaII CCGG 1 cut(s) 2564
HphI GGTGA 3 cut(s) 1414, 2008, 2927
Hpy166II GTNNAC 9 cut(s) 220, 502, 619, 764, 797, 2095, 2105, 2179, 2608
Hpy8I GTNNAC 9 cut(s) 220, 502, 619, 764, 797, 2095, 2105, 2179, 2608
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 7 cut(s) 325, 538, 1007, 1571, 2067, 2407, 2861
HpyCH4III ACNGT 5 cut(s) 387, 1555, 2312, 2612, 2638
HpyCH4IV ACGT 4 cut(s) 1029, 1191, 1517, 3050
HpyF10VI GCNNNNNNNGC 3 cut(s) 2298, 2350, 2869
HpySE526I ACGT 4 cut(s) 1029, 1191, 1517, 3050
HspAI GCGC 4 cut(s) 2301, 2573, 2780, 2811
KspAI GTTAAC 1 cut(s) 619
LguI GCTCTTC 1 cut(s) 1210
LmnI GCTCC 6 cut(s) 317, 930, 1298, 1352, 1892, 2734
Lsp1109I GCAGC 3 cut(s) 1223, 2023, 2812
LweI GCATC 1 cut(s) 2218
MaeI CTAG 7 cut(s) 191, 533, 776, 789, 816, 1745, 2366
MaeII ACGT 4 cut(s) 1029, 1191, 1517, 3050
MaeIII GTNAC 5 cut(s) 399, 716, 1275, 1420, 2993
MhlI GDGCHC 2 cut(s) 2091, 2704
MlsI TGGCCA 1 cut(s) 2495
MluNI TGGCCA 1 cut(s) 2495
MlyI GAGTC 8 cut(s) 21, 320, 571, 669, 769, 1151, 1326, 2512
MmeI TCCRAC 7 cut(s) 459, 737, 1401, 1591, 1858, 1870, 2843
Mox20I TGGCCA 1 cut(s) 2495
Mph1103I ATGCAT 1 cut(s) 1869
MroXI GAANNNNTTC 2 cut(s) 1193, 1980
MscI TGGCCA 1 cut(s) 2495
MslI CAYNNNNRTG 3 cut(s) 39, 1171, 2916
Msp20I TGGCCA 1 cut(s) 2495
MspA1I CMGCKG 2 cut(s) 1427, 2825
MspI CCGG 1 cut(s) 2564
MspR9I CCNGG 2 cut(s) 1241, 2497
Mva1269I GAATGC 5 cut(s) 1495, 1849, 1929, 2968, 3007
MvaI CCWGG 2 cut(s) 1241, 2497
MvnI CGCG 1 cut(s) 2301
MwoI GCNNNNNNNGC 3 cut(s) 2298, 2350, 2869
NcoI CCATGG 2 cut(s) 2911, 3023
NlaIV GGNNCC 9 cut(s) 805, 1387, 1810, 2089, 2562, 2702, 2745, 2758, 2901
NmuCI GTSAC 2 cut(s) 1420, 2993
NsiI ATGCAT 1 cut(s) 1869
NspI RCATGY 3 cut(s) 580, 1176, 1871
PagI TCATGA 1 cut(s) 57
PceI AGGCCT 2 cut(s) 280, 2836
PciI ACATGT 1 cut(s) 576
PciSI GCTCTTC 1 cut(s) 1210
PctI GAATGC 5 cut(s) 1495, 1849, 1929, 2968, 3007
PdmI GAANNNNTTC 2 cut(s) 1193, 1980
PfeI GAWTC 5 cut(s) 628, 1750, 1835, 2324, 2402
PflMI CCANNNNNTGG 2 cut(s) 605, 3029
PkrI GCNGC 4 cut(s) 1213, 2038, 2208, 2827
PleI GAGTC 8 cut(s) 20, 320, 570, 668, 768, 1151, 1325, 2512
PpsI GAGTC 8 cut(s) 20, 320, 570, 668, 768, 1151, 1325, 2512
Ppu21I YACGTR 1 cut(s) 1518
PscI ACATGT 1 cut(s) 576
PshBI ATTAAT 3 cut(s) 485, 695, 920
Psp6I CCWGG 2 cut(s) 1239, 2495
PspFI CCCAGC 2 cut(s) 252, 371
PspGI CCWGG 2 cut(s) 1239, 2495
PspN4I GGNNCC 9 cut(s) 805, 1387, 1810, 2089, 2562, 2702, 2745, 2758, 2901
PspOMI GGGCCC 2 cut(s) 2087, 2700
PstI CTGCAG 4 cut(s) 104, 1213, 2004, 2851
PstNI CAGNNNCTG 1 cut(s) 1229
PvuII CAGCTG 1 cut(s) 2825
RsaI GTAC 9 cut(s) 491, 1052, 1058, 1271, 1484, 2119, 2276, 2309, 2421
RsaNI GTAC 9 cut(s) 490, 1051, 1057, 1270, 1483, 2118, 2275, 2308, 2420
RseI CAYNNNNRTG 3 cut(s) 39, 1171, 2916
SapI GCTCTTC 1 cut(s) 1210
SatI GCNGC 4 cut(s) 1212, 2037, 2207, 2826
ScaI AGTACT 3 cut(s) 1052, 1271, 2276
SchI GAGTC 8 cut(s) 21, 320, 571, 669, 769, 1151, 1326, 2512
ScrFI CCNGG 2 cut(s) 1241, 2497
SduI GDGCHC 2 cut(s) 2091, 2704
SfaNI GCATC 1 cut(s) 2218
SfcI CTRYAG 7 cut(s) 100, 1209, 1830, 2000, 2547, 2608, 2847
SinI GGWCC 5 cut(s) 515, 947, 1808, 2312, 2455
SmiMI CAYNNNNRTG 3 cut(s) 39, 1171, 2916
SmlI CTYRAG 4 cut(s) 427, 559, 829, 2020
SmoI CTYRAG 4 cut(s) 427, 559, 829, 2020
SseBI AGGCCT 2 cut(s) 280, 2836
SsiI CCGC 5 cut(s) 1117, 1425, 1571, 2206, 2669
SspI AATATT 1 cut(s) 1404
SspMI CTAG 7 cut(s) 191, 533, 776, 789, 816, 1745, 2366
StuI AGGCCT 2 cut(s) 280, 2836
StyD4I CCNGG 2 cut(s) 1239, 2495
StyI CCWWGG 6 cut(s) 532, 1152, 1790, 2532, 2911, 3023
TaaI ACNGT 5 cut(s) 387, 1555, 2312, 2612, 2638
TaiI ACGT 4 cut(s) 1032, 1194, 1520, 3053
TaqI TCGA 3 cut(s) 420, 2153, 2665
TatI WGTACW 5 cut(s) 1050, 1269, 1482, 2274, 2419
TauI GCSGC 1 cut(s) 2209
TfiI GAWTC 5 cut(s) 628, 1750, 1835, 2324, 2402
TscAI CASTG 6 cut(s) 448, 675, 1374, 1402, 2415, 2886
TseFI GTSAC 2 cut(s) 1420, 2993
TseI GCWGC 3 cut(s) 1211, 2036, 2825
Tsp45I GTSAC 2 cut(s) 1420, 2993
TspGWI ACGGA 3 cut(s) 801, 882, 1633
TspRI CASTG 6 cut(s) 448, 675, 1374, 1402, 2415, 2886
Van91I CCANNNNNTGG 2 cut(s) 605, 3029
VpaK11BI GGWCC 5 cut(s) 515, 947, 1808, 2312, 2455
VspI ATTAAT 3 cut(s) 485, 695, 920
XapI RAATTY 4 cut(s) 735, 881, 1358, 2171
XbaI TCTAGA 1 cut(s) 1744
XceI RCATGY 3 cut(s) 580, 1176, 1871
XmaJI CCTAGG 1 cut(s) 532
XmiI GTMKAC 5 cut(s) 219, 796, 2094, 2104, 2607
XmnI GAANNNNTTC 2 cut(s) 1193, 1980
XspI CTAG 7 cut(s) 191, 533, 776, 789, 816, 1745, 2366
ZrmI AGTACT 3 cut(s) 1052, 1271, 2276
Zsp2I ATGCAT 1 cut(s) 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.