FvH4_3g20230

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
13282405 .. 13291101
8697 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g20230.t1

Sequence Viewer

Length: 3027 bp
ATGAAGCACAAGACCATTATGCTCACCATTTTGGTTCTCTGCCTGGTCTGCATAGTACCACCACTCCAGGTTGAAGCACAACCCCGACGTCTTGCTGCTGAAGAAAGGGAAGTACTACTAGAAATTGGTTTACAATTAGGAAAAAAAGGCTGGAACTTGGATGTTGATCCTTGCAATGACACAACCTGGTCTACCGCCCCTAGTGGTGACGAGCCCTTATACAACAACACTGTCGTATGCAACTGCTCGTACCCTGATGGTCTATGCCACGTCGTCAAGATTTTTCTTAAAGGACAAGACCTGGCTGGTGAACTTCCATCATCTATTGCAAAGTTGCCCTATCTTACAGCAATTGATTTCATGAGGAACTACCTAACTGGTAATATACCAAGTGCATGGGCTTCTACGAAGTTGGAATATCTGTCCATTGCTGTGAACAACTTATCAGGACCAATCCCTGCCTTCTTGGGAAACATTACAACTCTGGTGTATATGAACATAGAGAATAACGTGTTCTCAGGAACTGTTCCTCCCGACCTTGGAAACTTGGTTAACTTGCAGAATCTTATTCTTAGTGCCAACAATCTCACAGGAGTACTGCCGGTGGCTCTAATGAATCTGACAAAGTTAACAGAACTGAGGATTAGTAGCAACAACTTCACTGGAAGAATGCCCGACTTTTTTCAAAGTTGGAACCAACTTCAGAATTTAGAGATCCAAGCTAGCGGTTTACAAGGTCCCATTCCATCTACCGTTTCTGTCTTGAGTAATTTAACAGAACTAAGGATCAGCGACTTAAGCGGAGCGGGTTCAGTATTTCCAGATTTGAGTAATATGACAAGCATGCGAAGATTAATGCTGAGGAGCTGTAATTTATCAGGACGTATTCCTAATTTATCAGCAATGACAGGATTGTATATTTTAGATCTCAGCTTCAACACTTTGGAAGGAAGTATTCCTGATCTTGAAGATCTTTTTCTGAACGATTTTTTGCAGTACTTGTATCTAACTAGCAACTTGCTCAGTGGCTCTATTCCAGACTGGATCAAGAGCAGAGATAGTCGCTACGTGATAGATGTTTCTTACAATAATTTTTTTAAGAGCTCTGAGCCATCTTTTTGCGCAGAAAACGTGAACGTGTTCAAAAGTGTTTCTACAAGTGATAACTCATTATATGCAGAGTGCCTGAAAAACTCTTCATGTCCAAAAGATCAGTACTCATTGCATATCAATTGTGGTGGTAAAGCAACCACCATTGAAGGAGTCAACTTTGAAGCGGATCAAGACCTAGGAGGTCCAGCACATTGGGCTCCTTCAAGGCCTAGCTGGGGATTCAGCAGTACTGGACATTTTTGGGATACCAACGCCGCCACCTCTACAGACTACATAGCAAATAATATATCTATACTTGGGATGAACAACTCTGAGTTGTACACACATGCACGTCTCTCTCCTCTTTCTCTGACGTATTATGCACGCTGCTTGGCAAATGGAAATTATAATGTGAAGCTTTACTTTTCGGAGATTATAATCAGAGGCAATGCATCTTTTCACGGTCTTGGAAGAAGGATATTTGATGTTTATATTCAGGATAAACGAGTGTTGAAGGATTTTGACATCAAAGATACAGCAGGAGTGGTTGATATAGTAGTAATTAGAGACTTCCCAGTTGAGGTTAAAGATAAAACTTTAGAAATCCGATTTCATTGGTCTGGGAAAGGAACAACAGCGTCCCCAAGGAGAGGAGTATATGGTCCGCTAATATCAGCGATCTCAGTAAATTTTGATAGTTCCGCCACTGCTGATGCCAAAAAGAAGGTACTAATTGCGGTTGCAGCTTCGGCTGGAAGTTTTGTTTTCTTAATTTTAGGCATTCTTTGGTGGAAAGGTTTTCTGGATAGCATGACATCAAGGGGAAAAGCTTGTAGAGGACTGGATCTGCAAAAGGGTTTTTTCACCTTCAAGCAAATTAAAGCTGCCACTAACAACTTTGATCTGGCAAACAAAATTGGGGAAGGTGGTTTTGGGTCTGTCTACAAGGGTATATTATTGGATGGTACAATAGTTGCCGTTAAACAACTGTCTTCAAAATCAAAGCAGGGAAATCGAGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTGCAACATCCAAATCTTGTTAGATTGTATGGATCTTGCACTGAAGCAAATGAACTACTGCTGGTTTATGAATACATGGAAAACAATAGCCTTGCACATGCTTTGTTTGGTCTAGAGGAAGGTCCAGCAAGATTGGACTGGCATACAAGGCAGAGAATATGTATAGGCATAGCAAAAGGTCTGGCTTTCTTGCATGAGGAATCAGCACTTAAGGTTGTACACAGAGACATCAAAACTACGAATGTGTTATTGGACAAAGACCTTAATGCTAAGATCTCGGATTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAACACCCACATCAGCACCAGAGTAGCTGGAACTATAGGATACATGGCTCCAGAATATGCACTTTGGGGTTATTTAACCTTCAAAGCAGATGTCTTCAGTTTTGGAGTTGTCACACTGGAAATAGTTGCTGGAAAGAACAACATGAAGTTTCGACCAAATGAGAATTTTGTAGGCCTTGTGGATTGGGCTCTTGTGTTACAACAAAAAGAGAGTTTAGTGGAACTGGTGGATCCAAAGTTAGGGTCAGATTTCAGTGAGGAAGAGGCGGTTAGAATGGTTAAAGTAGCTCTGCTATGCATCAATCCGACAGCTGCACTTAGGCCAAACATGTCTGCAGTCGTGAGTATGCTCGAGGGGCGAATTCCTGTCGATGAATTGATTATGGATCCAAGTATATATAGCGAAGAAATGAGGTTAACAGCCTTGAGAAATCCGTTTGAGCAGACTGTCGAAGAGAGCGCAGGTGGAACTAAGAGCTTGATACATTCATCAGATGCATCATGGAATGGTTCTTCTGCTCCTACTATATCTTCAGATCTCTATAAAATCAGTCCTAGTGGTTACTCTAAGTAG

Protein Analysis

1009

Amino Acids

110.92

Weight (kDa)

5.62

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 155 - 350 2.1e-10 Leucine-rich repeat region
LRR_8 PF13855 185 - 240 5.8e-06 Leucine rich repeat
Malectin PF11721 407 - 591 1.5e-36 Malectin domain
PK_Tyr_Ser-Thr PF07714 666 - 933 5.8e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 666 - 867 3.6e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1500, 1529
AarI CACCTGC 1 cut(s) 2906
AatII GACGTC 1 cut(s) 91
Acc16I TGCGCA 1 cut(s) 1123
Acc36I ACCTGC 1 cut(s) 2906
AccBSI CCGCTC 1 cut(s) 806
AccI GTMKAC 2 cut(s) 191, 2034
AcsI RAATTY 5 cut(s) 706, 1780, 2111, 2617, 2814
AcuI CTGAAG 5 cut(s) 120, 686, 2205, 2533, 2970
AcyI GRCGYC 1 cut(s) 88
AfiI CCNNNNNNNGG 5 cut(s) 539, 1328, 1672, 1742, 2693
AflII CTTAAG 2 cut(s) 796, 2351
AflIII ACRYGT 3 cut(s) 510, 1137, 2781
AjiI CACGTC 2 cut(s) 271, 1445
AjnI CCWGG 4 cut(s) 42, 66, 185, 300
AjuI GAANNNNNNNTTGG 4 cut(s) 2007, 2039, 2375, 2407
AloI GAACNNNNNNTCC 2 cut(s) 514, 546
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 3 cut(s) 1451, 1653, 2361
AlwNI CAGNNNCTG 1 cut(s) 524
Ama87I CYCGRG 1 cut(s) 2804
AoxI GGCC 3 cut(s) 1319, 2626, 2774
ApeKI GCWGC 5 cut(s) 95, 1479, 1835, 1976, 2765
ApoI RAATTY 5 cut(s) 706, 1780, 2111, 2617, 2814
ArsI GACNNNNNNTTYG 4 cut(s) 2529, 2561, 2681, 2713
AseI ATTAAT 1 cut(s) 854
Asp700I GAANNNNTTC 1 cut(s) 1139
AspA2I CCTAGG 1 cut(s) 1288
AspLEI GCGC 2 cut(s) 1124, 2915
AspS9I GGNCC 5 cut(s) 449, 737, 1295, 1754, 2264
AsuHPI GGTGA 4 cut(s) 16, 218, 320, 1948
AsuNHI GCTAGC 1 cut(s) 722
AvaI CYCGRG 1 cut(s) 2804
AvaII GGWCC 5 cut(s) 449, 737, 1295, 1754, 2264
AvrII CCTAGG 1 cut(s) 1288
BaeI ACNNNNGTAYC 2 cut(s) 2049, 2082
BamHI GGATCC 2 cut(s) 2683, 2839
BanII GRGCYC 4 cut(s) 216, 1106, 1312, 2644
BbsI GAAGAC 2 cut(s) 2076, 2539
Bbv12I GWGCWC 1 cut(s) 1106
BbvCI CCTCAGC 1 cut(s) 860
BbvI GCAGC 5 cut(s) 82, 1466, 1847, 1963, 2752
BccI CCATC 5 cut(s) 251, 325, 754, 1120, 2048
BceAI ACGGC 1 cut(s) 2054
BcgI CGANNNNNNTGC 2 cut(s) 2087, 2121
BciT130I CCWGG 4 cut(s) 44, 68, 187, 302
BciVI GTATCC 2 cut(s) 1351, 2486
BcoDI GTCTC 3 cut(s) 1451, 1653, 2361
BfaI CTAG 8 cut(s) 119, 201, 723, 1011, 1289, 1323, 2255, 3009
BfmI CTRYAG 3 cut(s) 1377, 2487, 2787
BfrI CTTAAG 2 cut(s) 796, 2351
BfuAI ACCTGC 1 cut(s) 2906
BfuI GTATCC 2 cut(s) 1351, 2486
BglII AGATCT 4 cut(s) 925, 970, 2415, 2989
BisI GCNGC 6 cut(s) 96, 1368, 1480, 1836, 1977, 2766
BlnI CCTAGG 1 cut(s) 1288
BlsI GCNGC 6 cut(s) 97, 1369, 1481, 1837, 1978, 2767
BmcAI AGTACT 5 cut(s) 114, 597, 998, 1217, 1342
Bme1390I CCNGG 4 cut(s) 44, 68, 187, 302
Bme18I GGWCC 5 cut(s) 449, 737, 1295, 1754, 2264
BmeT110I CYCGRG 1 cut(s) 2804
BmgBI CACGTC 2 cut(s) 271, 1445
BmgT120I GGNCC 5 cut(s) 449, 737, 1295, 1754, 2264
BmiI GGNNCC 6 cut(s) 695, 739, 1311, 2502, 2685, 2841
BmrFI CCNGG 4 cut(s) 44, 68, 187, 302
BmrI ACTGGG 1 cut(s) 1661
BmsI GCATC 5 cut(s) 1553, 1795, 2760, 2938, 2960
BmtI GCTAGC 1 cut(s) 726
BmuI ACTGGG 1 cut(s) 1661
BpiI GAAGAC 2 cut(s) 2076, 2539
BpmI CTGGAG 2 cut(s) 50, 2487
Bpu10I CCTNAGC 1 cut(s) 860
BpuEI CTTGAG 2 cut(s) 784, 2899
BsaAI YACGTR 1 cut(s) 1069
BsaBI GATNNNNATC 2 cut(s) 165, 1529
BsaHI GRCGYC 1 cut(s) 88
BsaJI CCNNGG 3 cut(s) 538, 1288, 1736
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 514, 544
Bsc4I CCNNNNNNNGG 5 cut(s) 539, 1328, 1672, 1742, 2693
Bse118I RCCGGY 1 cut(s) 601
Bse1I ACTGG 9 cut(s) 382, 667, 1046, 1348, 1667, 1938, 2285, 2574, 2682
Bse3DI GCAATG 5 cut(s) 181, 426, 909, 1220, 1546
Bse8I GATNNNNATC 2 cut(s) 165, 1529
BseBI CCWGG 4 cut(s) 44, 68, 187, 302
BseDI CCNNGG 3 cut(s) 538, 1288, 1736
BseGI GGATG 4 cut(s) 166, 1419, 2059, 2149
BseJI GATNNNNATC 2 cut(s) 165, 1529
BseLI CCNNNNNNNGG 5 cut(s) 539, 1328, 1672, 1742, 2693
BseMI GCAATG 5 cut(s) 181, 426, 909, 1220, 1546
BseMII CTCAG 8 cut(s) 531, 629, 851, 943, 1036, 1098, 1416, 1788
BseNI ACTGG 9 cut(s) 382, 667, 1046, 1348, 1667, 1938, 2285, 2574, 2682
BseRI GAGGAG 3 cut(s) 877, 1443, 1758
BseXI GCAGC 5 cut(s) 82, 1466, 1847, 1963, 2752
BseYI CCCAGC 1 cut(s) 1326
BsgI GTGCAG 1 cut(s) 2751
BshFI GGCC 3 cut(s) 1321, 2628, 2776
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 1 cut(s) 2804
BsiSI CCGG 1 cut(s) 602
BslFI GGGAC 2 cut(s) 723, 1717
BslI CCNNNNNNNGG 5 cut(s) 539, 1328, 1672, 1742, 2693
BsmAI GTCTC 3 cut(s) 1451, 1653, 2361
BsmBI CGTCTC 1 cut(s) 1451
BsmFI GGGAC 2 cut(s) 723, 1717
BsmI GAATGC 2 cut(s) 675, 1872
BsnI GGCC 3 cut(s) 1321, 2628, 2776
BsoBI CYCGRG 1 cut(s) 2804
Bsp1286I GDGCHC 4 cut(s) 216, 1106, 1312, 2644
Bsp1407I TGTACA 2 cut(s) 1431, 2359
BspANI GGCC 3 cut(s) 1321, 2628, 2776
BspCNI CTCAG 8 cut(s) 530, 630, 852, 942, 1035, 1099, 1417, 1787
BspHI TCATGA 1 cut(s) 360
BspLI GGNNCC 6 cut(s) 695, 739, 1311, 2502, 2685, 2841
BspMAI CTGCAG 1 cut(s) 2791
BspMI ACCTGC 1 cut(s) 2906
BspOI GCTAGC 1 cut(s) 726
BspTI CTTAAG 2 cut(s) 796, 2351
BsrBI CCGCTC 1 cut(s) 806
BsrDI GCAATG 5 cut(s) 181, 426, 909, 1220, 1546
BsrFI RCCGGY 1 cut(s) 601
BsrGI TGTACA 2 cut(s) 1431, 2359
BsrI ACTGG 9 cut(s) 382, 667, 1046, 1348, 1667, 1938, 2285, 2574, 2682
BssAI RCCGGY 1 cut(s) 601
BssECI CCNNGG 3 cut(s) 538, 1288, 1736
BssNI GRCGYC 1 cut(s) 88
BssT1I CCWWGG 3 cut(s) 538, 1288, 1736
Bst2UI CCWGG 4 cut(s) 44, 68, 187, 302
Bst4CI ACNGT 6 cut(s) 232, 526, 754, 1556, 2082, 2902
Bst6I CTCTTC 4 cut(s) 1201, 2445, 2709, 2901
BstACI GRCGYC 1 cut(s) 88
BstAFI CTTAAG 2 cut(s) 796, 2351
BstAUI TGTACA 2 cut(s) 1431, 2359
BstBAI YACGTR 1 cut(s) 1069
BstC8I GCNNGC 3 cut(s) 724, 845, 1477
BstF5I GGATG 4 cut(s) 166, 1419, 2059, 2149
BstHHI GCGC 2 cut(s) 1124, 2915
BstMAI GTCTC 3 cut(s) 1451, 1653, 2361
BstMWI GCNNNNNNNGC 7 cut(s) 48, 798, 1307, 1835, 1841, 2290, 2809
BstNI CCWGG 4 cut(s) 44, 68, 187, 302
BstNSI RCATGY 4 cut(s) 847, 1442, 2243, 2785
BstSCI CCNGG 4 cut(s) 42, 66, 185, 300
BstSFI CTRYAG 3 cut(s) 1377, 2487, 2787
BstV1I GCAGC 5 cut(s) 82, 1466, 1847, 1963, 2752
BstV2I GAAGAC 2 cut(s) 2076, 2539
BstX2I RGATCY 9 cut(s) 714, 925, 970, 1936, 2174, 2415, 2683, 2839, 2989
BstXI CCANNNNNNTGG 2 cut(s) 396, 1305
BstYI RGATCY 9 cut(s) 714, 925, 970, 1936, 2174, 2415, 2683, 2839, 2989
BsuI GTATCC 2 cut(s) 1351, 2486
BsuRI GGCC 3 cut(s) 1321, 2628, 2776
BtrI CACGTC 2 cut(s) 271, 1445
BtsCI GGATG 4 cut(s) 166, 1419, 2059, 2149
BtsI GCAGTG 1 cut(s) 1797
BtsIMutI CAGTG 7 cut(s) 228, 660, 1030, 1797, 2181, 2567, 2713
BveI ACCTGC 1 cut(s) 2906
Cac8I GCNNGC 3 cut(s) 724, 845, 1477
CaiI CAGNNNCTG 1 cut(s) 524
CciI TCATGA 1 cut(s) 360
CfoI GCGC 2 cut(s) 1124, 2915
Cfr10I RCCGGY 1 cut(s) 601
Cfr13I GGNCC 5 cut(s) 449, 737, 1295, 1754, 2264
CseI GACGC 1 cut(s) 1719
CsiI ACCWGGT 1 cut(s) 185
CspCI CAANNNNNGTGG 2 cut(s) 1219, 1254
Eam1104I CTCTTC 4 cut(s) 1201, 2445, 2709, 2901
EarI CTCTTC 4 cut(s) 1201, 2445, 2709, 2901
EciI GGCGGA 1 cut(s) 1783
Ecl136II GAGCTC 1 cut(s) 1104
Eco130I CCWWGG 3 cut(s) 538, 1288, 1736
Eco147I AGGCCT 2 cut(s) 1321, 2628
Eco24I GRGCYC 4 cut(s) 216, 1106, 1312, 2644
Eco47I GGWCC 5 cut(s) 449, 737, 1295, 1754, 2264
Eco53kI GAGCTC 1 cut(s) 1104
Eco57I CTGAAG 5 cut(s) 120, 686, 2205, 2533, 2970
Eco88I CYCGRG 1 cut(s) 2804
EcoICRI GAGCTC 1 cut(s) 1104
EcoO109I RGGNCCY 1 cut(s) 737
EcoRI GAATTC 1 cut(s) 2814
EcoRII CCWGG 4 cut(s) 42, 66, 185, 300
EcoT14I CCWWGG 3 cut(s) 538, 1288, 1736
EcoT22I ATGCAT 3 cut(s) 1546, 2753, 2953
EcoT38I GRGCYC 4 cut(s) 216, 1106, 1312, 2644
ErhI CCWWGG 3 cut(s) 538, 1288, 1736
Esp3I CGTCTC 1 cut(s) 1451
FalI AAGNNNNNCTT 2 cut(s) 1499, 1531
FaqI GGGAC 2 cut(s) 723, 1717
FauI CCCGC 1 cut(s) 799
FblI GTMKAC 2 cut(s) 191, 2034
Fnu4HI GCNGC 6 cut(s) 96, 1368, 1480, 1836, 1977, 2766
FokI GGATG 4 cut(s) 173, 1426, 2066, 2136
FriOI GRGCYC 4 cut(s) 216, 1106, 1312, 2644
Fsp4HI GCNGC 6 cut(s) 96, 1368, 1480, 1836, 1977, 2766
FspBI CTAG 8 cut(s) 119, 201, 723, 1011, 1289, 1323, 2255, 3009
FspI TGCGCA 1 cut(s) 1123
GlaI GCGC 2 cut(s) 1123, 2914
GluI GCNGC 6 cut(s) 96, 1368, 1480, 1836, 1977, 2766
GsaI CCCAGC 1 cut(s) 1330
GsuI CTGGAG 2 cut(s) 50, 2487
HaeIII GGCC 3 cut(s) 1321, 2628, 2776
HapII CCGG 1 cut(s) 602
HgaI GACGC 1 cut(s) 1719
HhaI GCGC 2 cut(s) 1124, 2915
Hin1I GRCGYC 1 cut(s) 88
Hin6I GCGC 2 cut(s) 1122, 2913
HinP1I GCGC 2 cut(s) 1122, 2913
HincII GTYRAC 4 cut(s) 553, 630, 1267, 2871
HindII GTYRAC 4 cut(s) 553, 630, 1267, 2871
HindIII AAGCTT 3 cut(s) 1508, 1920, 2438
HinfI GANTC 5 cut(s) 562, 616, 1263, 1332, 2342
HpaI GTTAAC 3 cut(s) 553, 630, 2871
HpaII CCGG 1 cut(s) 602
HphI GGTGA 4 cut(s) 16, 218, 320, 1948
Hpy99I CGWCG 2 cut(s) 90, 275
HpyCH4III ACNGT 6 cut(s) 232, 526, 754, 1556, 2082, 2902
HpyCH4IV ACGT 9 cut(s) 88, 270, 510, 883, 1068, 1131, 1137, 1444, 1466
HpyF10VI GCNNNNNNNGC 7 cut(s) 48, 798, 1307, 1835, 1841, 2290, 2809
HpySE526I ACGT 9 cut(s) 88, 270, 510, 883, 1068, 1131, 1137, 1444, 1466
Hsp92I GRCGYC 1 cut(s) 88
HspAI GCGC 2 cut(s) 1122, 2913
KspAI GTTAAC 3 cut(s) 553, 630, 2871
LmnI GCTCC 5 cut(s) 803, 864, 1315, 2506, 2977
Lsp1109I GCAGC 5 cut(s) 82, 1466, 1847, 1963, 2752
LweI GCATC 5 cut(s) 1553, 1795, 2760, 2938, 2960
MabI ACCWGGT 1 cut(s) 185
MaeI CTAG 8 cut(s) 119, 201, 723, 1011, 1289, 1323, 2255, 3009
MaeII ACGT 9 cut(s) 88, 270, 510, 883, 1068, 1131, 1137, 1444, 1466
MaeIII GTNAC 4 cut(s) 206, 2563, 2649, 3014
MbiI CCGCTC 1 cut(s) 806
MfeI CAATTG 2 cut(s) 351, 1231
MflI RGATCY 9 cut(s) 714, 925, 970, 1936, 2174, 2415, 2683, 2839, 2989
MhlI GDGCHC 4 cut(s) 216, 1106, 1312, 2644
MlyI GAGTC 1 cut(s) 1272
MmeI TCCRAC 3 cut(s) 393, 671, 2783
Mph1103I ATGCAT 3 cut(s) 1546, 2753, 2953
MroXI GAANNNNTTC 1 cut(s) 1139
MslI CAYNNNNRTG 1 cut(s) 431
MspA1I CMGCKG 1 cut(s) 2765
MspCI CTTAAG 2 cut(s) 796, 2351
MspI CCGG 1 cut(s) 602
MspR9I CCNGG 4 cut(s) 44, 68, 187, 302
MunI CAATTG 2 cut(s) 351, 1231
Mva1269I GAATGC 2 cut(s) 675, 1872
MvaI CCWGG 4 cut(s) 44, 68, 187, 302
MwoI GCNNNNNNNGC 7 cut(s) 48, 798, 1307, 1835, 1841, 2290, 2809
NheI GCTAGC 1 cut(s) 722
NlaIV GGNNCC 6 cut(s) 695, 739, 1311, 2502, 2685, 2841
NmuCI GTSAC 2 cut(s) 206, 2563
NsbI TGCGCA 1 cut(s) 1123
NsiI ATGCAT 3 cut(s) 1546, 2753, 2953
NspI RCATGY 4 cut(s) 847, 1442, 2243, 2785
PaeI GCATGC 1 cut(s) 847
PaeR7I CTCGAG 1 cut(s) 2804
PagI TCATGA 1 cut(s) 360
PaqCI CACCTGC 1 cut(s) 2906
PceI AGGCCT 2 cut(s) 1321, 2628
PciI ACATGT 1 cut(s) 2781
PctI GAATGC 2 cut(s) 675, 1872
PdmI GAANNNNTTC 1 cut(s) 1139
PfeI GAWTC 4 cut(s) 562, 616, 1332, 2342
PkrI GCNGC 6 cut(s) 97, 1369, 1481, 1837, 1978, 2767
PleI GAGTC 1 cut(s) 1271
PpsI GAGTC 1 cut(s) 1271
Ppu21I YACGTR 1 cut(s) 1069
PpuMI RGGWCCY 1 cut(s) 737
PscI ACATGT 1 cut(s) 2781
PshBI ATTAAT 1 cut(s) 854
PsiI TTATAA 2 cut(s) 1500, 1529
Psp124BI GAGCTC 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 737
Psp6I CCWGG 4 cut(s) 42, 66, 185, 300
PspFI CCCAGC 1 cut(s) 1326
PspGI CCWGG 4 cut(s) 42, 66, 185, 300
PspN4I GGNNCC 6 cut(s) 695, 739, 1311, 2502, 2685, 2841
PspPI GGNCC 5 cut(s) 449, 737, 1295, 1754, 2264
PspPPI RGGWCCY 1 cut(s) 737
PspXI VCTCGAGB 1 cut(s) 2804
PstI CTGCAG 1 cut(s) 2791
PstNI CAGNNNCTG 1 cut(s) 524
PsuI RGATCY 9 cut(s) 714, 925, 970, 1936, 2174, 2415, 2683, 2839, 2989
PvuII CAGCTG 1 cut(s) 2765
RseI CAYNNNNRTG 1 cut(s) 431
SacI GAGCTC 1 cut(s) 1106
SatI GCNGC 6 cut(s) 96, 1368, 1480, 1836, 1977, 2766
Sau96I GGNCC 5 cut(s) 449, 737, 1295, 1754, 2264
ScaI AGTACT 5 cut(s) 114, 597, 998, 1217, 1342
SchI GAGTC 1 cut(s) 1272
ScrFI CCNGG 4 cut(s) 44, 68, 187, 302
SduI GDGCHC 4 cut(s) 216, 1106, 1312, 2644
SexAI ACCWGGT 1 cut(s) 185
SfaNI GCATC 5 cut(s) 1553, 1795, 2760, 2938, 2960
SfcI CTRYAG 3 cut(s) 1377, 2487, 2787
Sfr274I CTCGAG 1 cut(s) 2804
SinI GGWCC 5 cut(s) 449, 737, 1295, 1754, 2264
SlaI CTCGAG 1 cut(s) 2804
SmiMI CAYNNNNRTG 1 cut(s) 431
SmlI CTYRAG 5 cut(s) 763, 796, 2351, 2804, 2878
SmoI CTYRAG 5 cut(s) 763, 796, 2351, 2804, 2878
SphI GCATGC 1 cut(s) 847
SseBI AGGCCT 2 cut(s) 1321, 2628
SspMI CTAG 8 cut(s) 119, 201, 723, 1011, 1289, 1323, 2255, 3009
SstI GAGCTC 1 cut(s) 1106
StuI AGGCCT 2 cut(s) 1321, 2628
StyD4I CCNGG 4 cut(s) 42, 66, 185, 300
StyI CCWWGG 3 cut(s) 538, 1288, 1736
TaaI ACNGT 6 cut(s) 232, 526, 754, 1556, 2082, 2902
TaiI ACGT 9 cut(s) 91, 273, 513, 886, 1071, 1134, 1140, 1447, 1469
TaqI TCGA 5 cut(s) 2107, 2605, 2805, 2823, 2904
TatI WGTACW 7 cut(s) 112, 595, 996, 1215, 1340, 1431, 2359
TauI GCSGC 1 cut(s) 1370
TfiI GAWTC 4 cut(s) 562, 616, 1332, 2342
TscAI CASTG 7 cut(s) 235, 667, 1030, 1804, 2188, 2574, 2713
TseFI GTSAC 2 cut(s) 206, 2563
TseI GCWGC 5 cut(s) 95, 1479, 1835, 1976, 2765
Tsp45I GTSAC 2 cut(s) 206, 2563
TspGWI ACGGA 1 cut(s) 2877
TspRI CASTG 7 cut(s) 235, 667, 1030, 1804, 2188, 2574, 2713
Vha464I CTTAAG 2 cut(s) 796, 2351
VpaK11BI GGWCC 5 cut(s) 449, 737, 1295, 1754, 2264
VspI ATTAAT 1 cut(s) 854
XapI RAATTY 5 cut(s) 706, 1780, 2111, 2617, 2814
XbaI TCTAGA 1 cut(s) 2254
XceI RCATGY 4 cut(s) 847, 1442, 2243, 2785
XhoI CTCGAG 1 cut(s) 2804
XmaJI CCTAGG 1 cut(s) 1288
XmiI GTMKAC 2 cut(s) 191, 2034
XmnI GAANNNNTTC 1 cut(s) 1139
XspI CTAG 8 cut(s) 119, 201, 723, 1011, 1289, 1323, 2255, 3009
ZraI GACGTC 1 cut(s) 89
ZrmI AGTACT 5 cut(s) 114, 597, 998, 1217, 1342
Zsp2I ATGCAT 3 cut(s) 1546, 2753, 2953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.