Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

86195625 .. 86204501

Gene Structure 8877 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCAGAAGTTCTCACTGGTCAAAAACCCATCTTCTTTAGCTATGTTGCTGTGCTTGTTGTGCTTATTTGTCTTGTACCCATCAAATCTCAAGCACAATCTGGGGCTCTTGCACCCGATGAAGTGGAAGCCCTTCGTGAAATAGCTGAACAACTAAATAAGGACTGGGATTTCAGTGACCCATGTAGCAATGTTCCTACGTTTTCGGGTCCACATACTGATCAGTACAACAATACTCTGGTCTGCAATTGCTCCATCTCCGGCAATGTATGCCACATTGAAAGCATTTATCTTACTGGTCAGGACCTAGATGGTGTTCTTCCAGCATCACTGGCTAAGCTACCTTATCTTAAGCAAGTGGCCTTGGAAAGCAACTTATTTTCAGGACCTGTTCCTTCGGACCTGGGAAAATTGATTAACATGGAGAATCTTCAGATAGGTAGTAACAACTTCACTGGAAGAATACCCAACTACTTTCAAAGTTGGAAAGACCTCCAAAGCTTAGAGATGCAAGCGAGCGGTCTTGAAGGGCCCCTTCCATCTAGTCTCTCTGCCTTAAACAATATGACAGACCTGAGGATTGGTGACTTAAGTGGTGAGAGTTCAGAATTTCCAAATTTATCAAACATGAAAAACATGAAGACACTGATGTTAAGGAGCTGCAATATAAAAGGAGAAATCCATGAATATATATCTACCATGACAAAGCTGACTGCTTTAGATCTAAGCTTCAACAGATTGGAAGGGGCCATTCCAAATTTTGCTAATCTAATGCAGTTATCAACAATATATTTGACAAGTAACTTGCTTACTGGCCTTCCAGACTGGATCAAAAGTAGAGACAGTCGCTACTATGTTTCTTCATCTCCTATATTACATTACTCATTGCATATAAATTGTGGTGGAAAACAAACCACCATCGGAAGCATCAAGTATGAAGGAGATGAAGCCTCAGGAGGTGCAGCAACATTTGTTCAGGCCACACCCAATTGGGGGTTTAGTAGCACTGGTGATTTCGTAGATGCTTGGAGTTCTGACAAGGACTATATTGCCAATAATGTTTCCATACTTAAAATGAACAACTCCAAATTGTACACAACTGCACGACTTTCTCCTCTTTCTCTCACCTACTATGCCCATTGCTTAGCAAATGGAAATTACACTGTGCAACTACACTTCGCAGAGATAGTTCTCAGAGACAACAGGTCTTATTATGGTGTTGGAAGACGAATGTTTGATGTTTATATCCAGGACAAACTAGTATTGAAGGATTTTGATATTACAAAGGAAGCACTAGGGGTTGATAAGGACGTGATCAAGGTATTTGAAGCAGTTGTTAATGTTAAGACTTTACTGATCCGCTTTCAGTGGGCTGGGAGAGGGACAACTAATGTTCCACAACTGAAAGGATTGGATCTGCAAACTGGTTTCTTTAGATTCAAACAAATTCAAGCTGCCACCAACAACTTTGATGCCACAAACAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGAGAACTATTGGATGGTAGTTTTATTGCCGTTAAGCAACTTTCTTCAAAATCAAAGCAGGGAAATCGTGAATTCGTGAATGAAATAGGCATGATGTCTGCATTACAACACCCAAATCTTGTTAAACTGTATGGATGTTGCACGGAAGGAAATCAGTTATTGTTGGTCTACGAGTACATGGAGAACAATAGCCTTTCACATACTTTATTTGGTTCGGAGGAAGGCCTACGGAAATTGGACTGGCCTACAAGGCAGAAAATATGTGTTGGTATTGCAAGGGGTCTTGCTTTCCTGCACGATGGAACCTTGAAAATTGTTCATAGAGATGTCAAAACAACCAACATATTGCTGGATAGGGACCTTAATGCTAAGATAGCTGACTTCGGTTTGGCTAAGCTGGACGAAGAGGAGCATACCCATATTAGCACCAGAGTTGCTGGAACTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

655

Amino Acids

72.46

Weight (kDa)

5.87

Isoelectric Point (pI)

31.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	110 - 279	6.5e-08	Leucine-rich repeat region
Malectin	PF11721	295 - 468	5.4e-35	Malectin domain
Pkinase	PF00069	492 - 650	3.1e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	493 - 644	6.8e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	519
AccI	GTMKAC	1 cut(s)	1686
AciI	CCGC	2 cut(s)	519, 1360
AclWI	GGATC	3 cut(s)	836, 1351, 1422
AcsI	RAATTY	5 cut(s)	608, 616, 757, 1446, 1589
AcuI	CTGAAG	1 cut(s)	416
AfaI	GTAC	4 cut(s)	78, 227, 1094, 1694
AfiI	CCNNNNNNNGG	2 cut(s)	992, 993
AflII	CTTAAG	2 cut(s)	350, 589
AhdI	GACNNNNNGTC	1 cut(s)	1204
AhlI	ACTAGT	1 cut(s)	1258
AjiI	CACGTC	1 cut(s)	1312
AjnI	CCWGG	2 cut(s)	402, 1248
AjuI	GAANNNNNNNTTGG	2 cut(s)	1485, 1517
Alw26I	GTCTC	3 cut(s)	551, 834, 1191
AlwI	GGATC	3 cut(s)	836, 1351, 1422
AlwNI	CAGNNNCTG	1 cut(s)	389
AoxI	GGCC	7 cut(s)	360, 530, 747, 814, 978, 1741, 1760
ApaI	GGGCCC	1 cut(s)	534
ApeKI	GCWGC	3 cut(s)	660, 962, 1454
ApoI	RAATTY	5 cut(s)	608, 616, 757, 1446, 1589
Asp700I	GAANNNNTTC	1 cut(s)	132
AspS9I	GGNCC	8 cut(s)	209, 304, 386, 400, 530, 531, 747, 1876
AsuHPI	GGTGA	4 cut(s)	596, 608, 1022, 1117
AvaII	GGWCC	5 cut(s)	209, 304, 386, 400, 1876
AxyI	CCTNAGG	2 cut(s)	575, 952
BaeGI	GKGCMC	1 cut(s)	534
BanII	GRGCYC	2 cut(s)	109, 534
BbsI	GAAGAC	2 cut(s)	647, 1231
BbvI	GCAGC	3 cut(s)	647, 974, 1441
BccI	CCATC	8 cut(s)	38, 89, 263, 305, 547, 926, 1526, 1811
BceAI	ACGGC	1 cut(s)	1532
BcgI	CGANNNNNNTGC	2 cut(s)	1565, 1599
BciT130I	CCWGG	2 cut(s)	404, 1250
BclI	TGATCA	2 cut(s)	220, 1314
BcoDI	GTCTC	3 cut(s)	551, 834, 1191
BcuI	ACTAGT	1 cut(s)	1258
BfaI	CTAG	4 cut(s)	308, 543, 1259, 1295
BfrI	CTTAAG	2 cut(s)	350, 589
BglI	GCCNNNNNGGC	1 cut(s)	1768
BglII	AGATCT	1 cut(s)	721
BisI	GCNGC	3 cut(s)	661, 963, 1455
BlpI	GCTNAGC	3 cut(s)	336, 1144, 1911
BlsI	GCNGC	3 cut(s)	662, 964, 1456
Bme1390I	CCNGG	2 cut(s)	404, 1250
Bme18I	GGWCC	5 cut(s)	209, 304, 386, 400, 1876
BmeRI	GACNNNNNGTC	1 cut(s)	1204
BmgBI	CACGTC	1 cut(s)	1312
BmgT120I	GGNCC	8 cut(s)	209, 304, 386, 400, 530, 531, 747, 1876
BmiI	GGNNCC	6 cut(s)	210, 532, 533, 748, 1822, 1877
BmrFI	CCNGG	2 cut(s)	404, 1250
BmrI	ACTGGG	1 cut(s)	175
BmsI	GCATC	5 cut(s)	335, 498, 936, 1012, 1462
BmuI	ACTGGG	1 cut(s)	175
BpiI	GAAGAC	2 cut(s)	647, 1231
Bpu1102I	GCTNAGC	3 cut(s)	336, 1144, 1911
BpuEI	CTTGAG	1 cut(s)	75
BsaJI	CCNNGG	2 cut(s)	363, 403
Bsc4I	CCNNNNNNNGG	2 cut(s)	992, 993
Bse21I	CCTNAGG	2 cut(s)	575, 952
Bse3DI	GCAATG	4 cut(s)	196, 271, 884, 1138
BseBI	CCWGG	2 cut(s)	404, 1250
BseDI	CCNNGG	2 cut(s)	363, 403
BseGI	GGATG	2 cut(s)	1537, 1658
BseLI	CCNNNNNNNGG	2 cut(s)	992, 993
BseMI	GCAATG	4 cut(s)	196, 271, 884, 1138
BseMII	CTCAG	3 cut(s)	566, 966, 1207
BseRI	GAGGAG	2 cut(s)	1104, 1940
BseSI	GKGCMC	1 cut(s)	534
BseXI	GCAGC	3 cut(s)	647, 974, 1441
BseYI	CCCAGC	1 cut(s)	1373
BsgI	GTGCAG	3 cut(s)	981, 1086, 1796
BshFI	GGCC	7 cut(s)	362, 532, 749, 816, 980, 1743, 1762
BsiSI	CCGG	1 cut(s)	261
BslFI	GGGAC	2 cut(s)	1396, 1889
BslI	CCNNNNNNNGG	2 cut(s)	992, 993
BsmAI	GTCTC	3 cut(s)	551, 834, 1191
BsmFI	GGGAC	2 cut(s)	1396, 1889
BsnI	GGCC	7 cut(s)	362, 532, 749, 816, 980, 1743, 1762
Bsp120I	GGGCCC	1 cut(s)	530
Bsp1286I	GDGCHC	2 cut(s)	109, 534
Bsp1407I	TGTACA	1 cut(s)	1092
Bsp143I	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
Bsp1720I	GCTNAGC	3 cut(s)	336, 1144, 1911
BspACI	CCGC	2 cut(s)	519, 1360
BspANI	GGCC	7 cut(s)	362, 532, 749, 816, 980, 1743, 1762
BspCNI	CTCAG	3 cut(s)	567, 965, 1206
BspLI	GGNNCC	6 cut(s)	210, 532, 533, 748, 1822, 1877
BspPI	GGATC	3 cut(s)	836, 1351, 1422
BspTI	CTTAAG	2 cut(s)	350, 589
BsrBI	CCGCTC	1 cut(s)	519
BsrDI	GCAATG	4 cut(s)	196, 271, 884, 1138
BsrGI	TGTACA	1 cut(s)	1092
BssECI	CCNNGG	2 cut(s)	363, 403
BssMI	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
BssT1I	CCWWGG	1 cut(s)	363
Bst2UI	CCWGG	2 cut(s)	404, 1250
Bst4CI	ACNGT	3 cut(s)	845, 1165, 1647
Bst6I	CTCTTC	1 cut(s)	1917
BstAFI	CTTAAG	2 cut(s)	350, 589
BstAPI	GCANNNNNTGC	1 cut(s)	270
BstAUI	TGTACA	1 cut(s)	1092
BstC8I	GCNNGC	2 cut(s)	513, 517
BstDEI	CTNAG	9 cut(s)	336, 502, 575, 725, 952, 1144, 1193, 1887, 1911
BstF5I	GGATG	2 cut(s)	1537, 1658
BstKTI	GATC	6 cut(s)	223, 724, 831, 1317, 1359, 1417
BstMAI	GTCTC	3 cut(s)	551, 834, 1191
BstMBI	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
BstMWI	GCNNNNNNNGC	5 cut(s)	61, 270, 332, 1768, 1892
BstNI	CCWGG	2 cut(s)	404, 1250
BstSCI	CCNGG	2 cut(s)	402, 1248
BstSLI	GKGCMC	1 cut(s)	534
BstV1I	GCAGC	3 cut(s)	647, 974, 1441
BstV2I	GAAGAC	2 cut(s)	647, 1231
BstX2I	RGATCY	2 cut(s)	721, 1414
BstYI	RGATCY	2 cut(s)	721, 1414
Bsu36I	CCTNAGG	2 cut(s)	575, 952
BsuRI	GGCC	7 cut(s)	362, 532, 749, 816, 980, 1743, 1762
BtrI	CACGTC	1 cut(s)	1312
BtsCI	GGATG	2 cut(s)	1537, 1658
BtsIMutI	CAGTG	8 cut(s)	15, 181, 329, 453, 644, 1005, 1161, 1373
Cac8I	GCNNGC	2 cut(s)	513, 517
CaiI	CAGNNNCTG	1 cut(s)	389
Cfr13I	GGNCC	8 cut(s)	209, 304, 386, 400, 530, 531, 747, 1876
Csp6I	GTAC	4 cut(s)	77, 226, 1093, 1693
CviAII	CATG	8 cut(s)	183, 421, 628, 637, 683, 700, 1609, 1696
CviQI	GTAC	4 cut(s)	77, 226, 1093, 1693
DdeI	CTNAG	9 cut(s)	336, 502, 575, 725, 952, 1144, 1193, 1887, 1911
DpnI	GATC	6 cut(s)	222, 723, 830, 1316, 1358, 1416
DpnII	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
DriI	GACNNNNNGTC	1 cut(s)	1204
Eam1104I	CTCTTC	1 cut(s)	1917
Eam1105I	GACNNNNNGTC	1 cut(s)	1204
EarI	CTCTTC	1 cut(s)	1917
Eco130I	CCWWGG	1 cut(s)	363
Eco147I	AGGCCT	1 cut(s)	1743
Eco24I	GRGCYC	2 cut(s)	109, 534
Eco47I	GGWCC	5 cut(s)	209, 304, 386, 400, 1876
Eco57I	CTGAAG	1 cut(s)	416
Eco81I	CCTNAGG	2 cut(s)	575, 952
EcoO109I	RGGNCCY	5 cut(s)	304, 386, 530, 531, 1876
EcoRI	GAATTC	1 cut(s)	1589
EcoRII	CCWGG	2 cut(s)	402, 1248
EcoT14I	CCWWGG	1 cut(s)	363
EcoT38I	GRGCYC	2 cut(s)	109, 534
ErhI	CCWWGG	1 cut(s)	363
FaeI	CATG	8 cut(s)	186, 424, 631, 640, 686, 703, 1612, 1699
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	2 cut(s)	1396, 1889
FatI	CATG	8 cut(s)	182, 420, 627, 636, 682, 699, 1608, 1695
FbaI	TGATCA	2 cut(s)	220, 1314
FblI	GTMKAC	1 cut(s)	1686
Fnu4HI	GCNGC	3 cut(s)	661, 963, 1455
FokI	GGATG	2 cut(s)	1544, 1665
FriOI	GRGCYC	2 cut(s)	109, 534
Fsp4HI	GCNGC	3 cut(s)	661, 963, 1455
FspBI	CTAG	4 cut(s)	308, 543, 1259, 1295
GluI	GCNGC	3 cut(s)	661, 963, 1455
GsaI	CCCAGC	1 cut(s)	1377
HaeIII	GGCC	7 cut(s)	362, 532, 749, 816, 980, 1743, 1762
HapII	CCGG	1 cut(s)	261
Hin1II	CATG	8 cut(s)	186, 424, 631, 640, 686, 703, 1612, 1699
HindIII	AAGCTT	3 cut(s)	499, 727, 1484
HinfI	GANTC	2 cut(s)	427, 1437
HpaII	CCGG	1 cut(s)	261
HphI	GGTGA	4 cut(s)	596, 608, 1022, 1117
Hpy166II	GTNNAC	4 cut(s)	212, 1095, 1513, 1687
Hpy188I	TCNGA	7 cut(s)	400, 435, 607, 923, 1036, 1196, 1735
Hpy188III	TCNNGA	8 cut(s)	137, 302, 384, 524, 821, 954, 1586, 1594
Hpy8I	GTNNAC	4 cut(s)	212, 1095, 1513, 1687
HpyCH4III	ACNGT	3 cut(s)	845, 1165, 1647
HpyCH4IV	ACGT	2 cut(s)	200, 1311
HpyF10VI	GCNNNNNNNGC	5 cut(s)	61, 270, 332, 1768, 1892
HpyF3I	CTNAG	9 cut(s)	336, 502, 575, 725, 952, 1144, 1193, 1887, 1911
HpySE526I	ACGT	2 cut(s)	200, 1311
Hsp92II	CATG	8 cut(s)	186, 424, 631, 640, 686, 703, 1612, 1699
Ksp22I	TGATCA	2 cut(s)	220, 1314
Kzo9I	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
LmnI	GCTCC	4 cut(s)	257, 657, 1505, 1927
Lsp1109I	GCAGC	3 cut(s)	647, 974, 1441
LweI	GCATC	5 cut(s)	335, 498, 936, 1012, 1462
MaeI	CTAG	4 cut(s)	308, 543, 1259, 1295
MaeII	ACGT	2 cut(s)	200, 1311
MaeIII	GTNAC	4 cut(s)	176, 443, 584, 800
MalI	GATC	6 cut(s)	222, 723, 830, 1316, 1358, 1416
MbiI	CCGCTC	1 cut(s)	519
MboI	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
MboII	GAAGA	9 cut(s)	25, 311, 422, 471, 652, 852, 1236, 1554, 1934
MfeI	CAATTG	2 cut(s)	247, 988
MflI	RGATCY	2 cut(s)	721, 1414
MhlI	GDGCHC	2 cut(s)	109, 534
MmeI	TCCRAC	2 cut(s)	464, 1201
MnlI	CCTC	8 cut(s)	503, 570, 950, 961, 1125, 1373, 1729, 1918
MroXI	GAANNNNTTC	1 cut(s)	132
MslI	CAYNNNNRTG	1 cut(s)	1842
MspCI	CTTAAG	2 cut(s)	350, 589
MspI	CCGG	1 cut(s)	261
MspR9I	CCNGG	2 cut(s)	404, 1250
MunI	CAATTG	2 cut(s)	247, 988
MvaI	CCWGG	2 cut(s)	404, 1250
MwoI	GCNNNNNNNGC	5 cut(s)	61, 270, 332, 1768, 1892
NdeII	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
NlaIII	CATG	8 cut(s)	186, 424, 631, 640, 686, 703, 1612, 1699
NlaIV	GGNNCC	6 cut(s)	210, 532, 533, 748, 1822, 1877
NmuCI	GTSAC	2 cut(s)	176, 584
PceI	AGGCCT	1 cut(s)	1743
PdmI	GAANNNNTTC	1 cut(s)	132
PfeI	GAWTC	2 cut(s)	427, 1437
PfoI	TCCNGGA	1 cut(s)	1248
PkrI	GCNGC	3 cut(s)	662, 964, 1456
PpuMI	RGGWCCY	3 cut(s)	304, 386, 1876
Psp5II	RGGWCCY	3 cut(s)	304, 386, 1876
Psp6I	CCWGG	2 cut(s)	402, 1248
PspFI	CCCAGC	1 cut(s)	1373
PspGI	CCWGG	2 cut(s)	402, 1248
PspN4I	GGNNCC	6 cut(s)	210, 532, 533, 748, 1822, 1877
PspOMI	GGGCCC	1 cut(s)	530
PspPI	GGNCC	8 cut(s)	209, 304, 386, 400, 530, 531, 747, 1876
PspPPI	RGGWCCY	3 cut(s)	304, 386, 1876
PstNI	CAGNNNCTG	1 cut(s)	389
PsuI	RGATCY	2 cut(s)	721, 1414
RsaI	GTAC	4 cut(s)	78, 227, 1094, 1694
RsaNI	GTAC	4 cut(s)	77, 226, 1093, 1693
RseI	CAYNNNNRTG	1 cut(s)	1842
SatI	GCNGC	3 cut(s)	661, 963, 1455
Sau3AI	GATC	6 cut(s)	220, 721, 828, 1314, 1356, 1414
Sau96I	GGNCC	8 cut(s)	209, 304, 386, 400, 530, 531, 747, 1876
ScrFI	CCNGG	2 cut(s)	404, 1250
SduI	GDGCHC	2 cut(s)	109, 534
SfaNI	GCATC	5 cut(s)	335, 498, 936, 1012, 1462
SinI	GGWCC	5 cut(s)	209, 304, 386, 400, 1876
SmiMI	CAYNNNNRTG	1 cut(s)	1842
SmlI	CTYRAG	3 cut(s)	90, 350, 589
SmoI	CTYRAG	3 cut(s)	90, 350, 589
SpeI	ACTAGT	1 cut(s)	1258
SseBI	AGGCCT	1 cut(s)	1743
SsiI	CCGC	2 cut(s)	519, 1360
SspMI	CTAG	4 cut(s)	308, 543, 1259, 1295
StuI	AGGCCT	1 cut(s)	1743
StyD4I	CCNGG	2 cut(s)	402, 1248
StyI	CCWWGG	1 cut(s)	363
TaaI	ACNGT	3 cut(s)	845, 1165, 1647
TaiI	ACGT	2 cut(s)	203, 1314
TatI	WGTACW	3 cut(s)	225, 1092, 1692
TfiI	GAWTC	2 cut(s)	427, 1437
TscAI	CASTG	8 cut(s)	22, 181, 336, 460, 651, 1012, 1168, 1373
TseFI	GTSAC	2 cut(s)	176, 584
TseI	GCWGC	3 cut(s)	660, 962, 1454
Tsp45I	GTSAC	2 cut(s)	176, 584
TspGWI	ACGGA	2 cut(s)	1676, 1762
TspRI	CASTG	8 cut(s)	22, 181, 336, 460, 651, 1012, 1168, 1373
Vha464I	CTTAAG	2 cut(s)	350, 589
VpaK11BI	GGWCC	5 cut(s)	209, 304, 386, 400, 1876
XapI	RAATTY	5 cut(s)	608, 616, 757, 1446, 1589
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1864
XmiI	GTMKAC	1 cut(s)	1686
XmnI	GAANNNNTTC	1 cut(s)	132
XspI	CTAG	4 cut(s)	308, 543, 1259, 1295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.