receptor-like serine threonine-protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 63 - 170 | 8.1e-11 | Leucine-rich repeat region |
| Malectin | PF11721 | 314 - 498 | 1.9e-34 | Malectin domain |
| Pkinase | PF00069 | 574 - 843 | 5.7e-47 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 575 - 847 | 1.4e-46 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1247 |
| AbsI | CCTCGAGG | 1 cut(s) | 2617 |
| AccB1I | GGYRCC | 2 cut(s) | 2221, 2500 |
| AccI | GTMKAC | 2 cut(s) | 457, 2268 |
| AccII | CGCG | 1 cut(s) | 118 |
| AciI | CCGC | 3 cut(s) | 116, 998, 2551 |
| AcoI | YGGCCR | 1 cut(s) | 2154 |
| AcsI | RAATTY | 3 cut(s) | 1379, 1832, 2339 |
| AcuI | CTGAAG | 3 cut(s) | 413, 929, 2093 |
| AcyI | GRCGYC | 1 cut(s) | 128 |
| AfaI | GTAC | 7 cut(s) | 844, 938, 1151, 1757, 1780, 2109, 2255 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 266, 1049, 1277, 1463, 2432 |
| AflIII | ACRYGT | 3 cut(s) | 76, 237, 858 |
| AgeI | ACCGGT | 1 cut(s) | 2625 |
| AjnI | CCWGG | 2 cut(s) | 192, 1009 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1728, 1760 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 241, 273 |
| Alw21I | GWGCWC | 4 cut(s) | 827, 917, 2085, 2492 |
| Alw26I | GTCTC | 3 cut(s) | 700, 2594, 2627 |
| Alw44I | GTGCAC | 2 cut(s) | 2081, 2488 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 251, 594 |
| Ama87I | CYCGRG | 2 cut(s) | 1127, 2617 |
| AoxI | GGCC | 7 cut(s) | 463, 1040, 2003, 2154, 2365, 2379, 2513 |
| ApaI | GGGCCC | 2 cut(s) | 467, 2383 |
| ApaLI | GTGCAC | 2 cut(s) | 2081, 2488 |
| ApeKI | GCWGC | 5 cut(s) | 108, 375, 1197, 1697, 2642 |
| ApoI | RAATTY | 3 cut(s) | 1379, 1832, 2339 |
| AseI | ATTAAT | 1 cut(s) | 581 |
| AsiGI | ACCGGT | 1 cut(s) | 2625 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 860, 1328 |
| AsuHPI | GGTGA | 4 cut(s) | 825, 1669, 2058, 2606 |
| AvaI | CYCGRG | 2 cut(s) | 1127, 2617 |
| AvaII | GGWCC | 8 cut(s) | 176, 608, 1016, 1475, 1985, 2116, 2436, 2623 |
| BaeGI | GKGCMC | 4 cut(s) | 467, 2085, 2383, 2492 |
| BalI | TGGCCA | 1 cut(s) | 2156 |
| BamHI | GGATCC | 2 cut(s) | 2422, 2578 |
| BanI | GGYRCC | 2 cut(s) | 2221, 2500 |
| BanII | GRGCYC | 4 cut(s) | 467, 827, 917, 2383 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2466, 2498 |
| BauI | CACGAG | 1 cut(s) | 88 |
| BbsI | GAAGAC | 1 cut(s) | 1288 |
| Bbv12I | GWGCWC | 4 cut(s) | 827, 917, 2085, 2492 |
| BbvI | GCAGC | 5 cut(s) | 120, 387, 1184, 1684, 2629 |
| BccI | CCATC | 2 cut(s) | 481, 1769 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1808, 1842, 2092, 2126 |
| BciT130I | CCWGG | 2 cut(s) | 194, 1011 |
| BciVI | GTATCC | 1 cut(s) | 2207 |
| BclI | TGATCA | 1 cut(s) | 513 |
| BcoDI | GTCTC | 3 cut(s) | 700, 2594, 2627 |
| BfaI | CTAG | 6 cut(s) | 450, 477, 1044, 1272, 1316, 1860 |
| BfmI | CTRYAG | 5 cut(s) | 458, 1497, 2208, 2526, 2643 |
| BfuI | GTATCC | 1 cut(s) | 2207 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2011 |
| BglII | AGATCT | 5 cut(s) | 6, 655, 700, 1262, 2136 |
| BisI | GCNGC | 5 cut(s) | 109, 376, 1198, 1698, 2643 |
| BlsI | GCNGC | 5 cut(s) | 110, 377, 1199, 1699, 2644 |
| BmcAI | AGTACT | 1 cut(s) | 938 |
| Bme1390I | CCNGG | 2 cut(s) | 194, 1011 |
| Bme18I | GGWCC | 8 cut(s) | 176, 608, 1016, 1475, 1985, 2116, 2436, 2623 |
| BmeT110I | CYCGRG | 2 cut(s) | 1127, 2617 |
| BmrFI | CCNGG | 2 cut(s) | 194, 1011 |
| BmsI | GCATC | 4 cut(s) | 1147, 1336, 1879, 2674 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2148 |
| BpiI | GAAGAC | 1 cut(s) | 1288 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1974, 2006, 2644, 2676 |
| BpmI | CTGGAG | 1 cut(s) | 1032 |
| Bpu10I | CCTNAGC | 2 cut(s) | 261, 587 |
| BpuEI | CTTGAG | 2 cut(s) | 511, 574 |
| Bsa29I | ATCGAT | 1 cut(s) | 2693 |
| BsaAI | YACGTR | 1 cut(s) | 1185 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1247 |
| BsaHI | GRCGYC | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 3 cut(s) | 193, 1009, 2426 |
| BsaWI | WCCGGW | 1 cut(s) | 2625 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 241, 271, 1076, 1106, 1548, 1578, 1597, 1627 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 266, 1049, 1277, 1463, 2432 |
| Bse118I | RCCGGY | 2 cut(s) | 328, 2625 |
| Bse1I | ACTGG | 9 cut(s) | 394, 751, 767, 1069, 1367, 1659, 1672, 1776, 2006 |
| Bse3DI | GCAATG | 4 cut(s) | 153, 639, 941, 1213 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1247 |
| BseBI | CCWGG | 2 cut(s) | 194, 1011 |
| BseCI | ATCGAT | 1 cut(s) | 2693 |
| BseDI | CCNNGG | 3 cut(s) | 193, 1009, 2426 |
| BseGI | GGATG | 6 cut(s) | 1084, 1137, 1351, 1780, 1870, 1901 |
| BseJI | GATNNNNATC | 1 cut(s) | 1247 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 266, 1049, 1277, 1463, 2432 |
| BseMI | GCAATG | 4 cut(s) | 153, 639, 941, 1213 |
| BseMII | CTCAG | 9 cut(s) | 212, 252, 258, 601, 695, 819, 1134, 2005, 2675 |
| BseNI | ACTGG | 9 cut(s) | 394, 751, 767, 1069, 1367, 1659, 1672, 1776, 2006 |
| BseRI | GAGGAG | 2 cut(s) | 1161, 1509 |
| BseSI | GKGCMC | 4 cut(s) | 467, 2085, 2383, 2492 |
| BseXI | GCAGC | 5 cut(s) | 120, 387, 1184, 1684, 2629 |
| BseYI | CCCAGC | 2 cut(s) | 1047, 2431 |
| Bsh1236I | CGCG | 1 cut(s) | 118 |
| BshFI | GGCC | 7 cut(s) | 465, 1042, 2005, 2156, 2367, 2381, 2515 |
| BshNI | GGYRCC | 2 cut(s) | 2221, 2500 |
| BshTI | ACCGGT | 1 cut(s) | 2625 |
| BshVI | ATCGAT | 1 cut(s) | 2693 |
| BsiHKAI | GWGCWC | 4 cut(s) | 827, 917, 2085, 2492 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1127, 2617 |
| BsiSI | CCGG | 3 cut(s) | 329, 2498, 2626 |
| BslFI | GGGAC | 3 cut(s) | 1456, 1461, 2636 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 266, 1049, 1277, 1463, 2432 |
| BsmAI | GTCTC | 3 cut(s) | 700, 2594, 2627 |
| BsmBI | CGTCTC | 2 cut(s) | 2594, 2627 |
| BsmFI | GGGAC | 3 cut(s) | 1456, 1461, 2636 |
| BsmI | GAATGC | 3 cut(s) | 402, 684, 1593 |
| BsnI | GGCC | 7 cut(s) | 465, 1042, 2005, 2156, 2367, 2381, 2515 |
| BsoBI | CYCGRG | 2 cut(s) | 1127, 2617 |
| Bsp120I | GGGCCC | 2 cut(s) | 463, 2379 |
| Bsp1286I | GDGCHC | 6 cut(s) | 467, 827, 917, 2085, 2383, 2492 |
| Bsp1407I | TGTACA | 3 cut(s) | 842, 1149, 1755 |
| BspACI | CCGC | 3 cut(s) | 116, 998, 2551 |
| BspANI | GGCC | 7 cut(s) | 465, 1042, 2005, 2156, 2367, 2381, 2515 |
| BspCNI | CTCAG | 9 cut(s) | 213, 253, 257, 600, 696, 820, 1135, 2004, 2674 |
| BspDI | ATCGAT | 1 cut(s) | 2693 |
| BspFNI | CGCG | 1 cut(s) | 118 |
| BspHI | TCATGA | 2 cut(s) | 1522, 2563 |
| BspMAI | CTGCAG | 2 cut(s) | 2530, 2647 |
| BspQI | GCTCTTC | 1 cut(s) | 905 |
| BspT107I | GGYRCC | 2 cut(s) | 2221, 2500 |
| BsrDI | GCAATG | 4 cut(s) | 153, 639, 941, 1213 |
| BsrFI | RCCGGY | 2 cut(s) | 328, 2625 |
| BsrGI | TGTACA | 3 cut(s) | 842, 1149, 1755 |
| BsrI | ACTGG | 9 cut(s) | 394, 751, 767, 1069, 1367, 1659, 1672, 1776, 2006 |
| BssAI | RCCGGY | 2 cut(s) | 328, 2625 |
| BssECI | CCNNGG | 3 cut(s) | 193, 1009, 2426 |
| BssNAI | GTATAC | 1 cut(s) | 2269 |
| BssNI | GRCGYC | 1 cut(s) | 128 |
| BssSI | CACGAG | 1 cut(s) | 88 |
| BssT1I | CCWWGG | 1 cut(s) | 2426 |
| Bst1107I | GTATAC | 1 cut(s) | 2269 |
| Bst2BI | CACGAG | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 2 cut(s) | 194, 1011 |
| Bst4CI | ACNGT | 7 cut(s) | 48, 253, 642, 956, 1222, 2273, 2487 |
| Bst6I | CTCTTC | 4 cut(s) | 905, 2166, 2448, 2643 |
| BstACI | GRCGYC | 1 cut(s) | 128 |
| BstAUI | TGTACA | 3 cut(s) | 842, 1149, 1755 |
| BstBAI | YACGTR | 1 cut(s) | 1185 |
| BstC8I | GCNNGC | 3 cut(s) | 572, 1162, 2007 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| BstF5I | GGATG | 6 cut(s) | 1084, 1137, 1351, 1780, 1870, 1901 |
| BstFNI | CGCG | 1 cut(s) | 118 |
| BstMAI | GTCTC | 3 cut(s) | 700, 2594, 2627 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 912, 1028, 1203, 2011, 2548 |
| BstNI | CCWGG | 2 cut(s) | 194, 1011 |
| BstNSI | RCATGY | 3 cut(s) | 80, 241, 1964 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2148 |
| BstSCI | CCNGG | 2 cut(s) | 192, 1009 |
| BstSFI | CTRYAG | 5 cut(s) | 458, 1497, 2208, 2526, 2643 |
| BstSLI | GKGCMC | 4 cut(s) | 467, 2085, 2383, 2492 |
| BstUI | CGCG | 1 cut(s) | 118 |
| BstV1I | GCAGC | 5 cut(s) | 120, 387, 1184, 1684, 2629 |
| BstV2I | GAAGAC | 1 cut(s) | 1288 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 452, 1374 |
| BstZ17I | GTATAC | 1 cut(s) | 2269 |
| Bsu15I | ATCGAT | 1 cut(s) | 2693 |
| BsuI | GTATCC | 1 cut(s) | 2207 |
| BsuRI | GGCC | 7 cut(s) | 465, 1042, 2005, 2156, 2367, 2381, 2515 |
| BsuTUI | ATCGAT | 1 cut(s) | 2693 |
| BtsCI | GGATG | 6 cut(s) | 1084, 1137, 1351, 1780, 1870, 1901 |
| BtsIMutI | CAGTG | 4 cut(s) | 387, 1062, 1258, 2069 |
| Cac8I | GCNNGC | 3 cut(s) | 572, 1162, 2007 |
| CaiI | CAGNNNCTG | 2 cut(s) | 251, 594 |
| CciI | TCATGA | 2 cut(s) | 1522, 2563 |
| Cfr10I | RCCGGY | 2 cut(s) | 328, 2625 |
| ClaI | ATCGAT | 1 cut(s) | 2693 |
| CseI | GACGC | 3 cut(s) | 117, 1203, 2545 |
| Csp6I | GTAC | 7 cut(s) | 843, 937, 1150, 1756, 1779, 2108, 2254 |
| CspAI | ACCGGT | 1 cut(s) | 2625 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 940, 975, 1977, 2012 |
| CviQI | GTAC | 7 cut(s) | 843, 937, 1150, 1756, 1779, 2108, 2254 |
| DraI | TTTAAA | 2 cut(s) | 501, 1384 |
| EaeI | YGGCCR | 1 cut(s) | 2154 |
| Eam1104I | CTCTTC | 4 cut(s) | 905, 2166, 2448, 2643 |
| EarI | CTCTTC | 4 cut(s) | 905, 2166, 2448, 2643 |
| EciI | GGCGGA | 1 cut(s) | 2566 |
| Ecl136II | GAGCTC | 2 cut(s) | 825, 915 |
| Eco130I | CCWWGG | 1 cut(s) | 2426 |
| Eco147I | AGGCCT | 1 cut(s) | 2367 |
| Eco24I | GRGCYC | 4 cut(s) | 467, 827, 917, 2383 |
| Eco32I | GATATC | 1 cut(s) | 1629 |
| Eco47I | GGWCC | 8 cut(s) | 176, 608, 1016, 1475, 1985, 2116, 2436, 2623 |
| Eco53kI | GAGCTC | 2 cut(s) | 825, 915 |
| Eco57I | CTGAAG | 3 cut(s) | 413, 929, 2093 |
| Eco88I | CYCGRG | 2 cut(s) | 1127, 2617 |
| EcoICRI | GAGCTC | 2 cut(s) | 825, 915 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| EcoO109I | RGGNCCY | 4 cut(s) | 463, 464, 1040, 2380 |
| EcoRII | CCWGG | 2 cut(s) | 192, 1009 |
| EcoRV | GATATC | 1 cut(s) | 1629 |
| EcoT14I | CCWWGG | 1 cut(s) | 2426 |
| EcoT22I | ATGCAT | 1 cut(s) | 2027 |
| EcoT38I | GRGCYC | 4 cut(s) | 467, 827, 917, 2383 |
| ErhI | CCWWGG | 1 cut(s) | 2426 |
| Esp3I | CGTCTC | 2 cut(s) | 2594, 2627 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1217, 1249 |
| FaqI | GGGAC | 3 cut(s) | 1456, 1461, 2636 |
| FbaI | TGATCA | 1 cut(s) | 513 |
| FblI | GTMKAC | 2 cut(s) | 457, 2268 |
| Fnu4HI | GCNGC | 5 cut(s) | 109, 376, 1198, 1698, 2643 |
| FokI | GGATG | 6 cut(s) | 1091, 1144, 1358, 1787, 1857, 1908 |
| FriOI | GRGCYC | 4 cut(s) | 467, 827, 917, 2383 |
| Fsp4HI | GCNGC | 5 cut(s) | 109, 376, 1198, 1698, 2643 |
| FspBI | CTAG | 6 cut(s) | 450, 477, 1044, 1272, 1316, 1860 |
| GluI | GCNGC | 5 cut(s) | 109, 376, 1198, 1698, 2643 |
| GsaI | CCCAGC | 2 cut(s) | 1051, 2435 |
| GsuI | CTGGAG | 1 cut(s) | 1032 |
| HaeIII | GGCC | 7 cut(s) | 465, 1042, 2005, 2156, 2367, 2381, 2515 |
| HapII | CCGG | 3 cut(s) | 329, 2498, 2626 |
| HgaI | GACGC | 3 cut(s) | 117, 1203, 2545 |
| Hin1I | GRCGYC | 1 cut(s) | 128 |
| HincII | GTYRAC | 5 cut(s) | 132, 280, 357, 1084, 2610 |
| HindII | GTYRAC | 5 cut(s) | 132, 280, 357, 1084, 2610 |
| HindIII | AAGCTT | 6 cut(s) | 568, 661, 868, 1226, 1641, 2159 |
| HpaI | GTTAAC | 3 cut(s) | 280, 357, 1084 |
| HpaII | CCGG | 3 cut(s) | 329, 2498, 2626 |
| HphI | GGTGA | 4 cut(s) | 825, 1669, 2058, 2606 |
| Hpy99I | CGWCG | 1 cut(s) | 2561 |
| HpyAV | CCTTC | 6 cut(s) | 627, 846, 1318, 1730, 2068, 2540 |
| HpyCH4III | ACNGT | 7 cut(s) | 48, 253, 642, 956, 1222, 2273, 2487 |
| HpyCH4IV | ACGT | 5 cut(s) | 858, 880, 1184, 2252, 2636 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 912, 1028, 1203, 2011, 2548 |
| HpySE526I | ACGT | 5 cut(s) | 858, 880, 1184, 2252, 2636 |
| Hsp92I | GRCGYC | 1 cut(s) | 128 |
| Ksp22I | TGATCA | 1 cut(s) | 513 |
| KspAI | GTTAAC | 3 cut(s) | 280, 357, 1084 |
| LguI | GCTCTTC | 1 cut(s) | 905 |
| LmnI | GCTCC | 7 cut(s) | 591, 681, 822, 1036, 1556, 2413, 2553 |
| Lsp1109I | GCAGC | 5 cut(s) | 120, 387, 1184, 1684, 2629 |
| LweI | GCATC | 4 cut(s) | 1147, 1336, 1879, 2674 |
| MaeI | CTAG | 6 cut(s) | 450, 477, 1044, 1272, 1316, 1860 |
| MaeII | ACGT | 5 cut(s) | 858, 880, 1184, 2252, 2636 |
| MaeIII | GTNAC | 6 cut(s) | 60, 596, 636, 831, 1917, 2284 |
| MhlI | GDGCHC | 6 cut(s) | 467, 827, 917, 2085, 2383, 2492 |
| MlsI | TGGCCA | 1 cut(s) | 2156 |
| MluNI | TGGCCA | 1 cut(s) | 2156 |
| MlyI | GAGTC | 2 cut(s) | 702, 839 |
| MmeI | TCCRAC | 1 cut(s) | 398 |
| Mox20I | TGGCCA | 1 cut(s) | 2156 |
| Mph1103I | ATGCAT | 1 cut(s) | 2027 |
| MroXI | GAANNNNTTC | 2 cut(s) | 860, 1328 |
| MscI | TGGCCA | 1 cut(s) | 2156 |
| MslI | CAYNNNNRTG | 2 cut(s) | 158, 1875 |
| Msp20I | TGGCCA | 1 cut(s) | 2156 |
| MspI | CCGG | 3 cut(s) | 329, 2498, 2626 |
| MspR9I | CCNGG | 2 cut(s) | 194, 1011 |
| Mva1269I | GAATGC | 3 cut(s) | 402, 684, 1593 |
| MvaI | CCWGG | 2 cut(s) | 194, 1011 |
| MvnI | CGCG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 912, 1028, 1203, 2011, 2548 |
| NmeAIII | GCCGAG | 1 cut(s) | 925 |
| NmuCI | GTSAC | 3 cut(s) | 636, 831, 2284 |
| NsiI | ATGCAT | 1 cut(s) | 2027 |
| NspI | RCATGY | 3 cut(s) | 80, 241, 1964 |
| PaeR7I | CTCGAG | 1 cut(s) | 2617 |
| PagI | TCATGA | 2 cut(s) | 1522, 2563 |
| PceI | AGGCCT | 1 cut(s) | 2367 |
| PciI | ACATGT | 2 cut(s) | 76, 237 |
| PciSI | GCTCTTC | 1 cut(s) | 905 |
| PctI | GAATGC | 3 cut(s) | 402, 684, 1593 |
| PdmI | GAANNNNTTC | 2 cut(s) | 860, 1328 |
| PfeI | GAWTC | 8 cut(s) | 289, 343, 421, 984, 1053, 1502, 2063, 2404 |
| PinAI | ACCGGT | 1 cut(s) | 2625 |
| PkrI | GCNGC | 5 cut(s) | 110, 377, 1199, 1699, 2644 |
| PleI | GAGTC | 2 cut(s) | 702, 838 |
| PpsI | GAGTC | 2 cut(s) | 702, 838 |
| Ppu21I | YACGTR | 1 cut(s) | 1185 |
| PscI | ACATGT | 2 cut(s) | 76, 237 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2148 |
| PshBI | ATTAAT | 1 cut(s) | 581 |
| PsiI | TTATAA | 1 cut(s) | 1247 |
| Psp124BI | GAGCTC | 2 cut(s) | 827, 917 |
| Psp6I | CCWGG | 2 cut(s) | 192, 1009 |
| PspFI | CCCAGC | 2 cut(s) | 1047, 2431 |
| PspGI | CCWGG | 2 cut(s) | 192, 1009 |
| PspOMI | GGGCCC | 2 cut(s) | 463, 2379 |
| PspXI | VCTCGAGB | 1 cut(s) | 2617 |
| PstI | CTGCAG | 2 cut(s) | 2530, 2647 |
| PstNI | CAGNNNCTG | 2 cut(s) | 251, 594 |
| RsaI | GTAC | 7 cut(s) | 844, 938, 1151, 1757, 1780, 2109, 2255 |
| RsaNI | GTAC | 7 cut(s) | 843, 937, 1150, 1756, 1779, 2108, 2254 |
| RseI | CAYNNNNRTG | 2 cut(s) | 158, 1875 |
| SacI | GAGCTC | 2 cut(s) | 827, 917 |
| SapI | GCTCTTC | 1 cut(s) | 905 |
| SatI | GCNGC | 5 cut(s) | 109, 376, 1198, 1698, 2643 |
| ScaI | AGTACT | 1 cut(s) | 938 |
| SchI | GAGTC | 2 cut(s) | 702, 839 |
| ScrFI | CCNGG | 2 cut(s) | 194, 1011 |
| SduI | GDGCHC | 6 cut(s) | 467, 827, 917, 2085, 2383, 2492 |
| SfaNI | GCATC | 4 cut(s) | 1147, 1336, 1879, 2674 |
| SfcI | CTRYAG | 5 cut(s) | 458, 1497, 2208, 2526, 2643 |
| Sfr274I | CTCGAG | 1 cut(s) | 2617 |
| SinI | GGWCC | 8 cut(s) | 176, 608, 1016, 1475, 1985, 2116, 2436, 2623 |
| SlaI | CTCGAG | 1 cut(s) | 2617 |
| SmiI | ATTTAAAT | 1 cut(s) | 501 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 158, 1875 |
| SmlI | CTYRAG | 3 cut(s) | 490, 553, 2617 |
| SmoI | CTYRAG | 3 cut(s) | 490, 553, 2617 |
| SseBI | AGGCCT | 1 cut(s) | 2367 |
| SsiI | CCGC | 3 cut(s) | 116, 998, 2551 |
| SspMI | CTAG | 6 cut(s) | 450, 477, 1044, 1272, 1316, 1860 |
| SstI | GAGCTC | 2 cut(s) | 827, 917 |
| StuI | AGGCCT | 1 cut(s) | 2367 |
| StyD4I | CCNGG | 2 cut(s) | 192, 1009 |
| StyI | CCWWGG | 1 cut(s) | 2426 |
| SwaI | ATTTAAAT | 1 cut(s) | 501 |
| TaaI | ACNGT | 7 cut(s) | 48, 253, 642, 956, 1222, 2273, 2487 |
| TaiI | ACGT | 5 cut(s) | 861, 883, 1187, 2255, 2639 |
| TaqI | TCGA | 7 cut(s) | 81, 1293, 1332, 2326, 2472, 2618, 2693 |
| TatI | WGTACW | 5 cut(s) | 842, 936, 1149, 1755, 2107 |
| TfiI | GAWTC | 8 cut(s) | 289, 343, 421, 984, 1053, 1502, 2063, 2404 |
| TscAI | CASTG | 4 cut(s) | 394, 1069, 1258, 2076 |
| TseFI | GTSAC | 3 cut(s) | 636, 831, 2284 |
| TseI | GCWGC | 5 cut(s) | 108, 375, 1197, 1697, 2642 |
| Tsp45I | GTSAC | 3 cut(s) | 636, 831, 2284 |
| TspDTI | ATGAA | 7 cut(s) | 356, 519, 1148, 1415, 1947, 2552, 2580 |
| TspGWI | ACGGA | 1 cut(s) | 1300 |
| TspRI | CASTG | 4 cut(s) | 394, 1069, 1258, 2076 |
| VneI | GTGCAC | 2 cut(s) | 2081, 2488 |
| VpaK11BI | GGWCC | 8 cut(s) | 176, 608, 1016, 1475, 1985, 2116, 2436, 2623 |
| VspI | ATTAAT | 1 cut(s) | 581 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| XapI | RAATTY | 3 cut(s) | 1379, 1832, 2339 |
| XceI | RCATGY | 3 cut(s) | 80, 241, 1964 |
| XhoI | CTCGAG | 1 cut(s) | 2617 |
| XmiI | GTMKAC | 2 cut(s) | 457, 2268 |
| XmnI | GAANNNNTTC | 2 cut(s) | 860, 1328 |
| XspI | CTAG | 6 cut(s) | 450, 477, 1044, 1272, 1316, 1860 |
| ZrmI | AGTACT | 1 cut(s) | 938 |
| Zsp2I | ATGCAT | 1 cut(s) | 2027 |