RLG00000003039

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
43519293 .. 43528102
8810 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003039

Sequence Viewer

Length: 2955 bp
ATGGAACAAGTTCCCAAAATTCAAAAACTTAACTTCTTTAGATATATGGCTCCTTTCTTTGTGCTCATGTGCATTGGAGTGATTGGACCAATCAAATCCCAAGTTCAGTCGGGGACTCTTCCGTCTGATGAAGTGCAAGCCCTTGGTGAAATTGCTACACAACTGAATAAAACGAACTGGAATTTGAGTGACCCATGTACAAATATTCCAACTTTCTCAATCCCACATACGGATCAGTACAATGACACCCTCATCTGCGACTGTTCTTTCCGTGGCAATGCGTGCCATGTGGAAACCATTCTTCTTGTTGGTCAGGACCTCAATGGTGTGCTTCCACCATCACTGGTGAAGCTACCTTACCTTAAGGAACTAAATTTGGGTCAGAATTATCTCAGTGGTTCAATTCCACCTGAATGGGGTTCTACCAAGTTGGAATTTCTGGTTCTTAGTGCGAACAACTTATCAGGACCTATCCCTGCCTATTTGGGGAGCATAACTACTCTGCGATATTTGGCCTTGGAAAGCAACTTATTTTCTGGAACTGTTCCCCCGGACATCGGAAGATTGATTAACCTGGAAGTTCTCTACCTTCGAGCAAACAATCTCACTGGAGAGTTGCCTGTGGCTCTTACTAATTTGACCAAGCTAAAAACACTTTGGATTGGGAGTAACAACTTCATTGGAAGAATACCCAATTATTTTCCTAGTTGGAAACAACTTGAGATGCTAGAGATGCGAGCAAGTGGTCTTGAAGGGCCTATTCCGTCTAGTCTTTCTGCCTTAAGTAATCTGAGCTACCTGGAGATCAGTGACTTAACTGGTGGGAGTTCAGATTTTCCAAACTTACCAAACTTGAGAGGCATGCAGAGATTGTTTTTAAGGAGCTGCAATATCACAGGATCAATCCCTGAATATATCTCTAACATGACAAGTCTGAAAGTCTTCTCTGCTTTACTGAATGTCATTTGTGTGCCCAATACGACAACTTCTAATTACCCACTCCCTTTTCCTTTTCACAGAGATCTTAGCTTCAACAGATTGCATGGGAACATTCCAAATCTTGAAAAGTTATTTAATTTGAAAACAATATATTTGACAAATAATTGGCTTACTGGGCTTCCGGAGTGGATCAAAAATAGAGATAGCTACAACGCAATAGATCTTTCTTACAATAATTTCTCACAGATTTCTGTCCCGACGACATGCCAAGAGACCTCTAATTTTTTCAAAAGCTTCTCCAGACAGAACAACTCAATTCTTAGCAATTGCCCCCAACGATGTGATAAAGAAAAGTACTCATTGCATATAAATTGTGGTGGAAAACAAACCACCATTGGAAGCATCAAGTATGAAGGGGATGAAGTCCCGGGAGGTGGAGCAAAGTTTTTTCAAAGCACAGATAACTGGGGATTTAGTAGCACTGGTGATTGTGGGATTATTAATTTTGACCAAGCGTATATAGCGAACAATGTTTCCATACTCAAAATGAAGAACTCAGATTTGTACAGAACTGCCCGACTTTCTCCTCTTTCTCTCACATATTATGCCTACTGCTTAGCAAATGGAAATTACACTGTGACACTACAATTTGCAGAAATAGTTCTTAGAGACAACAGGTCTTATTACGGTGTTGGAAGAAGAATTTTTGATGTTTATATCCAGGAAAAACTGGTATTGAAGGATTTTAATATTGAAAAGGAAGCACAGGGAGTCGACAAGGAAGTGACTAAAGTCTTTAAAGCAGTTGTCAATGTTAAAACTATAGAGATCCGTTTTTATTGGGCTGGGAAAGGGACTACGAATGTCCCAACAAGAGGGATATATGGTTCTCTTATATCAGCTATCTCAGTGGAGTCTGATTTCAAGCCGCCTGGTGATAGCAAAAGGAAGATATTCTTTGTAGCTGGAGTTCTTTTAGTCTCATGCCTTATAATGATTTTTGGCATTCTTTGGTTCAGAGGCTGCTTTGAAGGCAGGATGTCTAGAGAACAAGAGAGAGAGGCAAAGGAGAGAATCGGAGATCCAGTCCGCGTTGTGCATCAGAGATCCAGATCATGCATTGAAGATCCAGTCGCGAAACGGTGTCATACGTCGTGCGGGCAATTATTAGATGGTACTACTATTGCTGTCAAGCAACTTTCTTCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAACGAAATAGGCATGATTTCTGGTTTGCGACATCCAAATCTTGTTAGATTGTATGGATGTTGCATTGAAGGAAATCAGTTGTTGCTGGTATACGAATACGTGGAGAACAATAGCCTTGCACATTGTTTGTTTGGTAAGCGTAGTCCACAAGAACATATACTGAATCTGGACTGGCCTAAAAGGCAAAAAATATGTATTGGCATTGCAAGAGGTCTGACTTTCCTGCATGAGGAATCGACGCTGAAAATTGTTCATAGAGACATTAAAATGAGATACATGGCGCCAGAATATGCATTATGGGGTTATTTAACTGATAAAGTAGATGTTTACAGTTTTGGAGTTGTTGCCTTAGAGCTCGTATCTGGCAAAACCAACATCAAATATCGCCCCAATGAGAATTATATATGCCTTCTAGATTGGGCCCTTGTTCTGCAACAAAAAGAAAATCTGATGGAGCTAGTGGATCCAAAGTTGGGATCCGAGTTCAACAACGAAGAAGCAATGAGAATGATCAAAGTAGCACTGCTCTGCACTAATCCAACTCCAGCACTGAGACCTACAATGTCAGCAGCACTAAGCATGCTTGAAGGCCAAGCTGTTATTCATGAACCAAGTATGAGTTCAAGTATGTATGGTGATGAACTGGGGTTCAAGGCCTTAAGAGATGACCATCAGGATGTGAATATTCAACAGAACCCAAGCGATACTCGGAGCCTCATTTATTCATCCAATGCCAAAGGGCCAGATGCCTCTTCCTCAAGGACTGTCCAGGATAGCTAG

Protein Analysis

985

Amino Acids

110.29

Weight (kDa)

8.15

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 160 - 269 4.8e-11 Leucine-rich repeat region
LRR_4 PF12799 191 - 232 4.5e-07 Leucine Rich repeats (2 copies)
Malectin PF11721 433 - 615 3.4e-38 Malectin domain
Pkinase PF00069 701 - 815 2.2e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 705 - 816 1.1e-17 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 813 - 916 7.2e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1931
AasI GACNNNNNNGTC 1 cut(s) 121
AccB1I GGYRCC 1 cut(s) 2455
AccI GTMKAC 2 cut(s) 1713, 2265
AccII CGCG 2 cut(s) 2031, 2075
AccIII TCCGGA 1 cut(s) 1120
AciI CCGC 3 cut(s) 1868, 2029, 2097
AcsI RAATTY 5 cut(s) 18, 181, 373, 434, 1641
AcyI GRCGYC 1 cut(s) 2456
AfaI GTAC 5 cut(s) 199, 239, 1295, 1505, 2116
AfiI CCNNNNNNNGG 8 cut(s) 229, 416, 486, 557, 1373, 1814, 2404, 2648
AflII CTTAAG 3 cut(s) 362, 781, 2833
AhdI GACNNNNNGTC 1 cut(s) 1615
AjnI CCWGG 5 cut(s) 573, 798, 1659, 1870, 2943
AjuI GAANNNNNNNTTGG 4 cut(s) 2760, 2779, 2792, 2811
AloI GAACNNNNNNTCC 4 cut(s) 1457, 1489, 1810, 1842
Alw21I GWGCWC 2 cut(s) 66, 2532
Alw26I GTCTC 5 cut(s) 1205, 1602, 1924, 2427, 2722
AlwNI CAGNNNCTG 1 cut(s) 1962
Ama87I CYCGRG 1 cut(s) 1366
Aor13HI TCCGGA 1 cut(s) 1120
AoxI GGCC 7 cut(s) 513, 755, 2348, 2595, 2764, 2829, 2915
ApaI GGGCCC 1 cut(s) 2599
ApeKI GCWGC 3 cut(s) 885, 1962, 2744
ApoI RAATTY 5 cut(s) 18, 181, 373, 434, 1641
AseI ATTAAT 1 cut(s) 1440
Asp700I GAANNNNTTC 5 cut(s) 9, 297, 941, 1599, 1892
AspLEI GCGC 1 cut(s) 2458
AspS9I GGNCC 7 cut(s) 86, 316, 467, 755, 2595, 2596, 2915
AsuC2I CCSGG 3 cut(s) 551, 1367, 1368
AsuHPI GGTGA 5 cut(s) 158, 358, 1436, 1886, 2822
AvaI CYCGRG 1 cut(s) 1366
AvaII GGWCC 3 cut(s) 86, 316, 467
BaeGI GKGCMC 2 cut(s) 975, 2599
BamHI GGATCC 2 cut(s) 2638, 2651
BanI GGYRCC 1 cut(s) 2455
BanII GRGCYC 2 cut(s) 2532, 2599
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BbsI GAAGAC 1 cut(s) 934
Bbv12I GWGCWC 2 cut(s) 66, 2532
BbvI GCAGC 3 cut(s) 872, 1949, 2756
BccI CCATC 4 cut(s) 346, 2105, 2620, 2853
BciT130I CCWGG 5 cut(s) 575, 800, 1661, 1872, 2945
BclI TGATCA 1 cut(s) 2685
BcnI CCSGG 3 cut(s) 551, 1367, 1368
BcoDI GTCTC 5 cut(s) 1205, 1602, 1924, 2427, 2722
BfaI CTAG 7 cut(s) 705, 728, 768, 1983, 2588, 2633, 2953
BfmI CTRYAG 1 cut(s) 1761
BfoI RGCGCY 1 cut(s) 2459
BfrI CTTAAG 3 cut(s) 362, 781, 2833
BglI GCCNNNNNGGC 1 cut(s) 2356
BglII AGATCT 2 cut(s) 1021, 1159
BisI GCNGC 4 cut(s) 886, 1868, 1963, 2745
BlpI GCTNAGC 1 cut(s) 1555
BlsI GCNGC 4 cut(s) 887, 1869, 1964, 2746
BmcAI AGTACT 1 cut(s) 1295
Bme1390I CCNGG 8 cut(s) 551, 575, 800, 1367, 1368, 1661, 1872, 2945
Bme18I GGWCC 3 cut(s) 86, 316, 467
BmeRI GACNNNNNGTC 1 cut(s) 1615
BmeT110I CYCGRG 1 cut(s) 1366
BmgT120I GGNCC 7 cut(s) 86, 316, 467, 755, 2595, 2596, 2915
BmiI GGNNCC 6 cut(s) 51, 2457, 2597, 2640, 2653, 2888
BmrFI CCNGG 8 cut(s) 551, 575, 800, 1367, 1368, 1661, 1872, 2945
BmrI ACTGGG 3 cut(s) 1122, 1414, 2828
BmsI GCATC 5 cut(s) 714, 723, 1350, 2047, 2911
BmuI ACTGGG 3 cut(s) 1122, 1414, 2828
BoxI GACNNNNGTC 1 cut(s) 1730
BpiI GAAGAC 1 cut(s) 934
BpmI CTGGAG 5 cut(s) 630, 821, 1222, 1926, 2703
Bpu1102I GCTNAGC 1 cut(s) 1555
BpuEI CTTGAG 3 cut(s) 740, 874, 2917
BpuMI CCSGG 3 cut(s) 551, 1367, 1368
BsaAI YACGTR 1 cut(s) 2275
BsaBI GATNNNNATC 2 cut(s) 2050, 2844
BsaHI GRCGYC 1 cut(s) 2456
BsaI GGTCTC 2 cut(s) 1205, 2722
BsaJI CCNNGG 5 cut(s) 142, 271, 516, 549, 1366
BsaWI WCCGGW 1 cut(s) 1120
BsaXI ACNNNNNCTCC 2 cut(s) 2010, 2040
Bsc4I CCNNNNNNNGG 8 cut(s) 229, 416, 486, 557, 1373, 1814, 2404, 2648
Bse3DI GCAATG 4 cut(s) 283, 1298, 2376, 2682
Bse8I GATNNNNATC 2 cut(s) 2050, 2844
BseAI TCCGGA 1 cut(s) 1120
BseBI CCWGG 5 cut(s) 575, 800, 1661, 1872, 2945
BseDI CCNNGG 5 cut(s) 142, 271, 516, 549, 1366
BseGI GGATG 6 cut(s) 1363, 1983, 2206, 2237, 2857, 2900
BseJI GATNNNNATC 2 cut(s) 2050, 2844
BseLI CCNNNNNNNGG 8 cut(s) 229, 416, 486, 557, 1373, 1814, 2404, 2648
BseMI GCAATG 4 cut(s) 283, 1298, 2376, 2682
BseMII CTCAG 5 cut(s) 406, 782, 1509, 1860, 2717
BseRI GAGGAG 1 cut(s) 1515
BseSI GKGCMC 2 cut(s) 975, 2599
BseXI GCAGC 3 cut(s) 872, 1949, 2756
BseYI CCCAGC 1 cut(s) 1784
BsgI GTGCAG 1 cut(s) 2689
Bsh1236I CGCG 2 cut(s) 2031, 2075
BshFI GGCC 7 cut(s) 515, 757, 2350, 2597, 2766, 2831, 2917
BshNI GGYRCC 1 cut(s) 2455
BsiHKAI GWGCWC 2 cut(s) 66, 2532
BsiHKCI CYCGRG 1 cut(s) 1366
BsiSI CCGG 3 cut(s) 551, 1121, 1367
BslFI GGGAC 5 cut(s) 127, 1178, 1349, 1790, 1807
BslI CCNNNNNNNGG 8 cut(s) 229, 416, 486, 557, 1373, 1814, 2404, 2648
BsmAI GTCTC 5 cut(s) 1205, 1602, 1924, 2427, 2722
BsmFI GGGAC 5 cut(s) 127, 1178, 1349, 1790, 1807
BsmI GAATGC 1 cut(s) 1944
BsnI GGCC 7 cut(s) 515, 757, 2350, 2597, 2766, 2831, 2917
Bso31I GGTCTC 2 cut(s) 1205, 2722
BsoBI CYCGRG 1 cut(s) 1366
Bsp120I GGGCCC 1 cut(s) 2595
Bsp1286I GDGCHC 4 cut(s) 66, 975, 2532, 2599
Bsp13I TCCGGA 1 cut(s) 1120
Bsp1407I TGTACA 2 cut(s) 197, 1503
Bsp1720I GCTNAGC 1 cut(s) 1555
Bsp68I TCGCGA 1 cut(s) 2075
BspACI CCGC 3 cut(s) 1868, 2029, 2097
BspANI GGCC 7 cut(s) 515, 757, 2350, 2597, 2766, 2831, 2917
BspCNI CTCAG 5 cut(s) 405, 783, 1508, 1859, 2718
BspEI TCCGGA 1 cut(s) 1120
BspFNI CGCG 2 cut(s) 2031, 2075
BspHI TCATGA 1 cut(s) 2779
BspLI GGNNCC 6 cut(s) 51, 2457, 2597, 2640, 2653, 2888
BspT107I GGYRCC 1 cut(s) 2455
BspTI CTTAAG 3 cut(s) 362, 781, 2833
BspTNI GGTCTC 2 cut(s) 1205, 2722
BsrDI GCAATG 4 cut(s) 283, 1298, 2376, 2682
BsrGI TGTACA 2 cut(s) 197, 1503
BssECI CCNNGG 5 cut(s) 142, 271, 516, 549, 1366
BssNAI GTATAC 1 cut(s) 2266
BssNI GRCGYC 1 cut(s) 2456
BssT1I CCWWGG 2 cut(s) 142, 516
Bst1107I GTATAC 1 cut(s) 2266
Bst2UI CCWGG 5 cut(s) 575, 800, 1661, 1872, 2945
Bst4CI ACNGT 7 cut(s) 263, 544, 1576, 1628, 2082, 2507, 2941
Bst6I CTCTTC 2 cut(s) 123, 2932
BstACI GRCGYC 1 cut(s) 2456
BstAFI CTTAAG 3 cut(s) 362, 781, 2833
BstAPI GCANNNNNTGC 1 cut(s) 282
BstAUI TGTACA 2 cut(s) 197, 1503
BstBAI YACGTR 1 cut(s) 2275
BstC8I GCNNGC 6 cut(s) 138, 283, 738, 863, 2099, 2756
BstDSI CCRYGG 1 cut(s) 271
BstENI CCTNNNNNAGG 1 cut(s) 2402
BstF5I GGATG 6 cut(s) 1363, 1983, 2206, 2237, 2857, 2900
BstFNI CGCG 2 cut(s) 2031, 2075
BstH2I RGCGCY 1 cut(s) 2459
BstHHI GCGC 1 cut(s) 2458
BstMAI GTCTC 5 cut(s) 1205, 1602, 1924, 2427, 2722
BstMWI GCNNNNNNNGC 6 cut(s) 282, 733, 1114, 1460, 1971, 2356
BstNI CCWGG 5 cut(s) 575, 800, 1661, 1872, 2945
BstNSI RCATGY 3 cut(s) 865, 1206, 2758
BstPAI GACNNNNGTC 1 cut(s) 1730
BstSCI CCNGG 8 cut(s) 549, 573, 798, 1365, 1366, 1659, 1870, 2943
BstSFI CTRYAG 1 cut(s) 1761
BstSLI GKGCMC 2 cut(s) 975, 2599
BstUI CGCG 2 cut(s) 2031, 2075
BstV1I GCAGC 3 cut(s) 872, 1949, 2756
BstV2I GAAGAC 1 cut(s) 934
BstX2I RGATCY 8 cut(s) 1021, 1159, 1767, 2020, 2045, 2065, 2638, 2651
BstXI CCANNNNNNTGG 1 cut(s) 414
BstYI RGATCY 8 cut(s) 1021, 1159, 1767, 2020, 2045, 2065, 2638, 2651
BstZ17I GTATAC 1 cut(s) 2266
BsuRI GGCC 7 cut(s) 515, 757, 2350, 2597, 2766, 2831, 2917
BtgI CCRYGG 1 cut(s) 271
BtsCI GGATG 6 cut(s) 1363, 1983, 2206, 2237, 2857, 2900
BtsI GCAGTG 1 cut(s) 2696
BtsIMutI CAGTG 9 cut(s) 341, 400, 606, 814, 1419, 1572, 1854, 2696, 2723
BtuMI TCGCGA 1 cut(s) 2075
Cac8I GCNNGC 6 cut(s) 138, 283, 738, 863, 2099, 2756
CaiI CAGNNNCTG 1 cut(s) 1962
CciI TCATGA 1 cut(s) 2779
CfoI GCGC 1 cut(s) 2458
Cfr13I GGNCC 7 cut(s) 86, 316, 467, 755, 2595, 2596, 2915
Cfr9I CCCGGG 1 cut(s) 1366
CseI GACGC 1 cut(s) 2422
Csp6I GTAC 5 cut(s) 198, 238, 1294, 1504, 2115
CviQI GTAC 5 cut(s) 198, 238, 1294, 1504, 2115
DinI GGCGCC 1 cut(s) 2457
DraI TTTAAA 1 cut(s) 1738
DrdI GACNNNNNNGTC 1 cut(s) 121
DriI GACNNNNNGTC 1 cut(s) 1615
DseDI GACNNNNNNGTC 1 cut(s) 121
Eam1104I CTCTTC 2 cut(s) 123, 2932
Eam1105I GACNNNNNGTC 1 cut(s) 1615
EarI CTCTTC 2 cut(s) 123, 2932
Ecl136II GAGCTC 1 cut(s) 2530
Eco130I CCWWGG 2 cut(s) 142, 516
Eco147I AGGCCT 1 cut(s) 2831
Eco24I GRGCYC 2 cut(s) 2532, 2599
Eco31I GGTCTC 2 cut(s) 1205, 2722
Eco47I GGWCC 3 cut(s) 86, 316, 467
Eco53kI GAGCTC 1 cut(s) 2530
Eco88I CYCGRG 1 cut(s) 1366
EcoICRI GAGCTC 1 cut(s) 2530
EcoNI CCTNNNNNAGG 1 cut(s) 2402
EcoO109I RGGNCCY 4 cut(s) 316, 467, 755, 2596
EcoRII CCWGG 5 cut(s) 573, 798, 1659, 1870, 2943
EcoT14I CCWWGG 2 cut(s) 142, 516
EcoT22I ATGCAT 2 cut(s) 2060, 2470
EcoT38I GRGCYC 2 cut(s) 2532, 2599
EgeI GGCGCC 1 cut(s) 2457
EheI GGCGCC 1 cut(s) 2457
ErhI CCWWGG 2 cut(s) 142, 516
FalI AAGNNNNNCTT 2 cut(s) 1880, 1912
FaqI GGGAC 5 cut(s) 127, 1178, 1349, 1790, 1807
FauI CCCGC 1 cut(s) 2090
FbaI TGATCA 1 cut(s) 2685
FblI GTMKAC 2 cut(s) 1713, 2265
Fnu4HI GCNGC 4 cut(s) 886, 1868, 1963, 2745
FokI GGATG 6 cut(s) 1370, 1990, 2193, 2244, 2864, 2887
FriOI GRGCYC 2 cut(s) 2532, 2599
Fsp4HI GCNGC 4 cut(s) 886, 1868, 1963, 2745
FspBI CTAG 7 cut(s) 705, 728, 768, 1983, 2588, 2633, 2953
GlaI GCGC 1 cut(s) 2457
GluI GCNGC 4 cut(s) 886, 1868, 1963, 2745
GsaI CCCAGC 1 cut(s) 1788
GsuI CTGGAG 5 cut(s) 630, 821, 1222, 1926, 2703
HaeII RGCGCY 1 cut(s) 2459
HaeIII GGCC 7 cut(s) 515, 757, 2350, 2597, 2766, 2831, 2917
HapII CCGG 3 cut(s) 551, 1121, 1367
HgaI GACGC 1 cut(s) 2422
HhaI GCGC 1 cut(s) 2458
Hin1I GRCGYC 1 cut(s) 2456
Hin6I GCGC 1 cut(s) 2456
HinP1I GCGC 1 cut(s) 2456
HincII GTYRAC 1 cut(s) 1714
HindII GTYRAC 1 cut(s) 1714
HindIII AAGCTT 1 cut(s) 1231
HinfI GANTC 6 cut(s) 115, 1710, 1853, 2013, 2338, 2408
HpaII CCGG 3 cut(s) 551, 1121, 1367
HphI GGTGA 5 cut(s) 158, 358, 1436, 1886, 2822
Hpy166II GTNNAC 5 cut(s) 1714, 2176, 2266, 2321, 2503
Hpy8I GTNNAC 5 cut(s) 1714, 2176, 2266, 2321, 2503
Hpy99I CGWCG 3 cut(s) 1201, 2095, 2416
HpyAV CCTTC 8 cut(s) 599, 746, 1346, 1672, 1964, 2237, 2594, 2756
HpyCH4III ACNGT 7 cut(s) 263, 544, 1576, 1628, 2082, 2507, 2941
HpyCH4IV ACGT 2 cut(s) 2090, 2274
HpyF10VI GCNNNNNNNGC 6 cut(s) 282, 733, 1114, 1460, 1971, 2356
HpySE526I ACGT 2 cut(s) 2090, 2274
Hsp92I GRCGYC 1 cut(s) 2456
HspAI GCGC 1 cut(s) 2456
KasI GGCGCC 1 cut(s) 2455
Kpn2I TCCGGA 1 cut(s) 1120
Ksp22I TGATCA 1 cut(s) 2685
LmnI GCTCC 6 cut(s) 55, 489, 882, 1376, 2629, 2886
Lsp1109I GCAGC 3 cut(s) 872, 1949, 2756
LweI GCATC 5 cut(s) 714, 723, 1350, 2047, 2911
MaeI CTAG 7 cut(s) 705, 728, 768, 1983, 2588, 2633, 2953
MaeII ACGT 2 cut(s) 2090, 2274
MaeIII GTNAC 5 cut(s) 188, 668, 809, 1576, 1723
MfeI CAATTG 1 cut(s) 1264
MflI RGATCY 8 cut(s) 1021, 1159, 1767, 2020, 2045, 2065, 2638, 2651
MhlI GDGCHC 4 cut(s) 66, 975, 2532, 2599
Mly113I GGCGCC 1 cut(s) 2456
MlyI GAGTC 3 cut(s) 109, 1719, 1862
MmeI TCCRAC 5 cut(s) 233, 411, 689, 1612, 2738
Mph1103I ATGCAT 2 cut(s) 2060, 2470
MroI TCCGGA 1 cut(s) 1120
MroXI GAANNNNTTC 5 cut(s) 9, 297, 941, 1599, 1892
MslI CAYNNNNRTG 5 cut(s) 77, 412, 968, 2441, 2850
MspCI CTTAAG 3 cut(s) 362, 781, 2833
MspI CCGG 3 cut(s) 551, 1121, 1367
MspR9I CCNGG 8 cut(s) 551, 575, 800, 1367, 1368, 1661, 1872, 2945
MunI CAATTG 1 cut(s) 1264
Mva1269I GAATGC 1 cut(s) 1944
MvaI CCWGG 5 cut(s) 575, 800, 1661, 1872, 2945
MvnI CGCG 2 cut(s) 2031, 2075
MwoI GCNNNNNNNGC 6 cut(s) 282, 733, 1114, 1460, 1971, 2356
NarI GGCGCC 1 cut(s) 2456
NciI CCSGG 3 cut(s) 551, 1367, 1368
NlaIV GGNNCC 6 cut(s) 51, 2457, 2597, 2640, 2653, 2888
NmuCI GTSAC 4 cut(s) 188, 809, 1576, 1723
NruI TCGCGA 1 cut(s) 2075
NsiI ATGCAT 2 cut(s) 2060, 2470
NspI RCATGY 3 cut(s) 865, 1206, 2758
PaeI GCATGC 2 cut(s) 865, 2758
PagI TCATGA 1 cut(s) 2779
PceI AGGCCT 1 cut(s) 2831
PctI GAATGC 1 cut(s) 1944
PdmI GAANNNNTTC 5 cut(s) 9, 297, 941, 1599, 1892
PfeI GAWTC 3 cut(s) 2013, 2338, 2408
PfoI TCCNGGA 2 cut(s) 1659, 2943
PkrI GCNGC 4 cut(s) 887, 1869, 1964, 2746
PleI GAGTC 3 cut(s) 109, 1718, 1861
PluTI GGCGCC 1 cut(s) 2459
PpsI GAGTC 3 cut(s) 109, 1718, 1861
Ppu21I YACGTR 1 cut(s) 2275
PpuMI RGGWCCY 2 cut(s) 316, 467
PshAI GACNNNNGTC 1 cut(s) 1730
PshBI ATTAAT 1 cut(s) 1440
PsiI TTATAA 1 cut(s) 1931
Psp124BI GAGCTC 1 cut(s) 2532
Psp5II RGGWCCY 2 cut(s) 316, 467
Psp6I CCWGG 5 cut(s) 573, 798, 1659, 1870, 2943
PspFI CCCAGC 1 cut(s) 1784
PspGI CCWGG 5 cut(s) 573, 798, 1659, 1870, 2943
PspN4I GGNNCC 6 cut(s) 51, 2457, 2597, 2640, 2653, 2888
PspOMI GGGCCC 1 cut(s) 2595
PspPI GGNCC 7 cut(s) 86, 316, 467, 755, 2595, 2596, 2915
PspPPI RGGWCCY 2 cut(s) 316, 467
PsrI GAACNNNNNNTAC 2 cut(s) 1893, 1925
PstNI CAGNNNCTG 1 cut(s) 1962
PsuI RGATCY 8 cut(s) 1021, 1159, 1767, 2020, 2045, 2065, 2638, 2651
RruI TCGCGA 1 cut(s) 2075
RsaI GTAC 5 cut(s) 199, 239, 1295, 1505, 2116
RsaNI GTAC 5 cut(s) 198, 238, 1294, 1504, 2115
RseI CAYNNNNRTG 5 cut(s) 77, 412, 968, 2441, 2850
SacI GAGCTC 1 cut(s) 2532
SalI GTCGAC 1 cut(s) 1712
SatI GCNGC 4 cut(s) 886, 1868, 1963, 2745
Sau96I GGNCC 7 cut(s) 86, 316, 467, 755, 2595, 2596, 2915
ScaI AGTACT 1 cut(s) 1295
SchI GAGTC 3 cut(s) 109, 1719, 1862
ScrFI CCNGG 8 cut(s) 551, 575, 800, 1367, 1368, 1661, 1872, 2945
SduI GDGCHC 4 cut(s) 66, 975, 2532, 2599
SfaNI GCATC 5 cut(s) 714, 723, 1350, 2047, 2911
SfcI CTRYAG 1 cut(s) 1761
SfoI GGCGCC 1 cut(s) 2457
SinI GGWCC 3 cut(s) 86, 316, 467
SmaI CCCGGG 1 cut(s) 1368
SmiMI CAYNNNNRTG 5 cut(s) 77, 412, 968, 2441, 2850
SmlI CTYRAG 6 cut(s) 362, 719, 781, 853, 2833, 2932
SmoI CTYRAG 6 cut(s) 362, 719, 781, 853, 2833, 2932
SphI GCATGC 2 cut(s) 865, 2758
SseBI AGGCCT 1 cut(s) 2831
SsiI CCGC 3 cut(s) 1868, 2029, 2097
SspDI GGCGCC 1 cut(s) 2455
SspI AATATT 3 cut(s) 205, 1690, 2860
SspMI CTAG 7 cut(s) 705, 728, 768, 1983, 2588, 2633, 2953
SstI GAGCTC 1 cut(s) 2532
StuI AGGCCT 1 cut(s) 2831
StyD4I CCNGG 8 cut(s) 549, 573, 798, 1365, 1366, 1659, 1870, 2943
StyI CCWWGG 2 cut(s) 142, 516
TaaI ACNGT 7 cut(s) 263, 544, 1576, 1628, 2082, 2507, 2941
TaiI ACGT 2 cut(s) 2093, 2277
TaqI TCGA 3 cut(s) 592, 1713, 2411
TatI WGTACW 4 cut(s) 197, 237, 1293, 1503
TauI GCSGC 1 cut(s) 1870
TfiI GAWTC 3 cut(s) 2013, 2338, 2408
TscAI CASTG 9 cut(s) 348, 400, 613, 814, 1426, 1579, 1854, 2703, 2730
TseFI GTSAC 4 cut(s) 188, 809, 1576, 1723
TseI GCWGC 3 cut(s) 885, 1962, 2744
Tsp45I GTSAC 4 cut(s) 188, 809, 1576, 1723
TspGWI ACGGA 5 cut(s) 111, 245, 260, 753, 1760
TspMI CCCGGG 1 cut(s) 1366
TspRI CASTG 9 cut(s) 348, 400, 613, 814, 1426, 1579, 1854, 2703, 2730
Vha464I CTTAAG 3 cut(s) 362, 781, 2833
VpaK11BI GGWCC 3 cut(s) 86, 316, 467
VspI ATTAAT 1 cut(s) 1440
XagI CCTNNNNNAGG 1 cut(s) 2402
XapI RAATTY 5 cut(s) 18, 181, 373, 434, 1641
XbaI TCTAGA 2 cut(s) 1982, 2587
XceI RCATGY 3 cut(s) 865, 1206, 2758
XmaI CCCGGG 1 cut(s) 1366
XmiI GTMKAC 2 cut(s) 1713, 2265
XmnI GAANNNNTTC 5 cut(s) 9, 297, 941, 1599, 1892
XspI CTAG 7 cut(s) 705, 728, 768, 1983, 2588, 2633, 2953
ZrmI AGTACT 1 cut(s) 1295
Zsp2I ATGCAT 2 cut(s) 2060, 2470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.