MD10G1273000.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
36446689 .. 36454366
7678 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1273000.v1.1.491

Sequence Viewer

Length: 2805 bp
ATGGCAGCAAGTCAAAAGCTTTCAAAGTTGTTCTTCTGCTATGTTGTTCTACTCACAGTGCTTATCTGCTTTGAGCCAATCAAATCCCAGGAACAGGTGGGCACTCTTGCAGATGATGAAGTGGAAGCACTTCGTGAAATAGCTGTGCAATTGAATAAAAAGGATTGGAATTTTAGTGATCCTTGTAGCAATATTCCGACTATTTCAATCCCGCATACGGATCAGTACAACAACACTCTCGTCTGCAACTGCTCTTTCTCTGGCAATGTATGCCACATCCAAAGCATTTTTCTGATGGGACAAGACCTTGATGGTGTGCTTCCGCCAGCACTGTCGAAGCTACCTAACATTAAGCAAGTTAATTTGGGCCAGAATTACCTTAGCGGTTCAATACCACACGAATGGAATTCTACGAAGTTGGAATTTCTGGTTCTCAGTGTGAACAACTTATCAGGACCTATTCCTAGCTATTTGGGAAGCATGACTACTCTCCGAGCTTTGGGCCTGGAGAGCAACTTATTTTCTGGAACTGTTCCCCCGGAGTTGGGCAATTTGGTTAACATGGAGATTCTCTATCTTCGTGCTAACAATCTCACTGGTGAGCTGCCCTTGGCCCTAAAAAATATGACCAAATTAAGAGTACTTGATATTGGCAGTAACAACTTCACTGGAAGAATACCTGACTACTTTCAAAGTTGGAAAGACCTACAGGCCTTAGAGATGCAAGCGAGTGGTCTTGAAGGGCCCCTTCCATCTAGTCTCTCTGCATTGAATAATATGACAGACCTAAGGATTAGCGACTTAAGTGGTGAGAGTTCAGCTTTTCCAAACTTATCAAACATGATGGGCTTGAATAAATTGATGTTGAGGAGCTGCAATATAACAGGAGAAATCCCTGAATATATCTCTACCATGACAAGTCTGACTGTTTTAGATCTTAGCTTCAACAGATTGGAAGGGAGCATTCCAAATCTTGCAAATATTATGCAATTGGCCACAATATATCTGACAAGTAACTTGCTTACTGGTCTTCCAGAGTGGATAAAAAACAGAGACAGTCGCTACAATATAGATCTTTCTTACAATAATTTTTCTCAGAATTCTGTCCCAAATTCTTGTCGAGAGACCTTCAATTTGTTCAGAAGTTTTTACGGTCGGAACAATGCGATACTTAGCAATTGCCTCCTTCCATGTTCAAAAGATCAGTACTCGTTGCATGTAAATTGTGGTGGAAATCAAACCACCATTGGAAACATCAAGTATGAGGAAGATGATGCCTCAGGAGGTGCAGCAAAGTTTTTTCAAAACTCAGCAACTTGGGGATTTGGAGTATACTGTAATAACTACTCTGATTGTACAAAATGCAATTCTTCTCTTCTTTCAGAATATTCATGCTGTCACTTAGCAATGGAAATTACACGTTACTGGTTTTGGAGATTTGATATGAAAGGGAGGAAGGGACAAGGGGTTGATAAGGAAGTGATTAAGGTATTTAAAGCAGTTGTTAGTGTTAAGACTTTAGAAATCCGATTTCAGTGGGCGGGGAAAGGGACAACAAATGTTCCAAAAAGAGGAATCTATGGTTCTCTGATATCAGCTATCTCAGTGCAGTCTGATTTCGAGCCACCTGATGATAGCAAAAGGAAGAAATTCATTGTGATTGGAGTTGTTTCAGCATTATTCCTCATTTTCTTGATTTTGGGCATTCTTTGGTGGAAAGGCTGTTTTGGAAGCAGGACAACCAGGGAACAAGATCTCATGGGATTAGATCTGCATACTGGTTTCTTTAAATTCAAGCAACTTAAGGCTGCAACTAACAACTTTGATACTGCCAACAAGCTTGGGGAAGGTGGCTTTGGAGCTGTTTACAAGGGCGAATTACTAGATGGCACTTTTATTGCAGTTAAGCAACTTTCTTCAAAATCAAAGCAGGGAAATCATGAGTTTGTGAATGAAATAGGCATGATTTCTGCCTTACAACACCCAAATCTTGTGAAATTGTATGGATGCTGCATTGAAGGAAATCAGTTATTTTTGGTATATGAATATATGGAGAACAATAGCCTTGCCCATGTTTTGTTTGGCCCGGACGAAGGCCTAAAGAAATTGGACTGGAATAAAAGGCAGAAAATATGTCTTGGCATTGCAAGAGGTCTGGCTTTCCTGCATGAGGAGTCGACTCTAAAAATTGTTCATAGAGACATCAAAACAACCAATATACTACTTGACCGGGACCTTAACCCTAAGATATCTGACTTTGGTTTAGCTAAGCTGGACGAAGAGGAGAAGACCCATATTAGCACCAGAGTTGCTGGAACTATAGGATACATGGCTCCAGAGTACGCGTTATGGGGCTATTTGAGTGACAAAGCAGATGTTTACAGTTTTGGGGTTGTCACATTGGAACTCGTATCTGGAAAAAACAACATCAAATATCGTCCAAATGAGAATTTTGTATGCCTTCTTGATTGGGCCCTTGTCTTGCAACAAAATGGAAATCTGATGGAGCTGGTGGATCGAAAGTTGGGGTCTGGGTTCAATAAGGAAGAGGCAATGAGAATGATAAAGGTAGCTCTACTATGCGCCAATCCATCACCAGCACTAAGACCTTCTATGTCCGCAGTAGTGAGCATGCTTGAAGGCCAAACTCTTGTTCAGGAGGTGAAGATAAACCCGAGTATTTATGGTGATGAGTTGAGGTTGGCCTTCTCGGAGGACTCTGATACTTCTACTGTACAGACCACGCGAAGTTTACTTTATTCATCCGATGCAAAATGGACCGCCTCTACCTCATCGTTTGTCTAG

Protein Analysis

935

Amino Acids

103.9

Weight (kDa)

6.15

Isoelectric Point (pI)

32.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 155 - 265 7.5e-09 Leucine-rich repeat region
Pkinase PF00069 609 - 822 5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 611 - 878 4.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000134)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1332, 2177
AccII CGCG 2 cut(s) 2345, 2746
AciI CCGC 6 cut(s) 212, 323, 384, 1541, 2619, 2781
AclWI GGATC 3 cut(s) 173, 228, 2523
AcoI YGGCCR 1 cut(s) 993
AcsI RAATTY 8 cut(s) 169, 406, 422, 1099, 1111, 1649, 1790, 2449
AdeI CACNNNGTG 1 cut(s) 134
AfaI GTAC 6 cut(s) 227, 642, 1208, 1357, 2342, 2736
AfiI CCNNNNNNNGG 8 cut(s) 94, 217, 499, 544, 545, 1571, 2093, 2170
AflII CTTAAG 2 cut(s) 802, 1802
AflIII ACRYGT 2 cut(s) 1418, 2343
AjnI CCWGG 3 cut(s) 87, 504, 1742
AjuI GAANNNNNNNTTGG 6 cut(s) 273, 305, 1839, 1871, 2637, 2669
Alw26I GTCTC 4 cut(s) 764, 1047, 1118, 2193
AlwI GGATC 3 cut(s) 173, 228, 2523
Ama87I CYCGRG 1 cut(s) 2674
ApaI GGGCCC 2 cut(s) 747, 2476
ApeKI GCWGC 6 cut(s) 5, 604, 873, 1289, 1808, 2010
ApoI RAATTY 8 cut(s) 169, 406, 422, 1099, 1111, 1649, 1790, 2449
ArsI GACNNNNNNTTYG 2 cut(s) 1117, 1149
Asp700I GAANNNNTTC 2 cut(s) 129, 1649
AspLEI GCGC 1 cut(s) 2585
AsuC2I CCSGG 3 cut(s) 539, 2087, 2231
AsuHPI GGTGA 5 cut(s) 611, 821, 2586, 2674, 2699
AvaI CYCGRG 1 cut(s) 2674
AvaII GGWCC 3 cut(s) 455, 2233, 2778
AxyI CCTNAGG 2 cut(s) 788, 1279
BaeGI GKGCMC 3 cut(s) 104, 747, 2476
BalI TGGCCA 1 cut(s) 995
BanII GRGCYC 2 cut(s) 747, 2476
BarI GAAGNNNNNNTAC 2 cut(s) 469, 501
BbsI GAAGAC 2 cut(s) 1022, 2294
BbvI GCAGC 6 cut(s) 17, 591, 860, 1301, 1795, 1997
BccI CCATC 7 cut(s) 289, 305, 760, 838, 1880, 2497, 2599
BciT130I CCWGG 3 cut(s) 89, 506, 1744
BciVI GTATCC 1 cut(s) 2318
BcnI CCSGG 3 cut(s) 539, 2087, 2231
BcoDI GTCTC 4 cut(s) 764, 1047, 1118, 2193
BfaI CTAG 4 cut(s) 465, 756, 1883, 2803
BfmI CTRYAG 2 cut(s) 707, 2319
BfrI CTTAAG 2 cut(s) 802, 1802
BfuI GTATCC 1 cut(s) 2318
BglII AGATCT 4 cut(s) 934, 1072, 1753, 1768
BisI GCNGC 6 cut(s) 6, 605, 874, 1290, 1809, 2011
BlpI GCTNAGC 1 cut(s) 2268
BlsI GCNGC 6 cut(s) 7, 606, 875, 1291, 1810, 2012
BmcAI AGTACT 2 cut(s) 642, 1208
Bme1390I CCNGG 6 cut(s) 89, 506, 539, 1744, 2087, 2231
Bme18I GGWCC 3 cut(s) 455, 2233, 2778
BmeT110I CYCGRG 1 cut(s) 2674
BmiI GGNNCC 5 cut(s) 745, 746, 2234, 2334, 2474
BmrFI CCNGG 6 cut(s) 89, 506, 539, 1744, 2087, 2231
BmsI GCATC 4 cut(s) 711, 1264, 1997, 2758
BpiI GAAGAC 2 cut(s) 1022, 2294
BpmI CTGGAG 2 cut(s) 527, 2319
Bpu10I CCTNAGC 1 cut(s) 380
Bpu1102I GCTNAGC 1 cut(s) 2268
BpuMI CCSGG 3 cut(s) 539, 2087, 2231
BsaI GGTCTC 1 cut(s) 1118
BsaJI CCNNGG 4 cut(s) 87, 537, 609, 1743
Bsc4I CCNNNNNNNGG 8 cut(s) 94, 217, 499, 544, 545, 1571, 2093, 2170
Bse1I ACTGG 6 cut(s) 601, 673, 1030, 1430, 1783, 2117
Bse21I CCTNAGG 2 cut(s) 788, 1279
Bse3DI GCAATG 4 cut(s) 271, 1413, 2142, 2559
BseBI CCWGG 3 cut(s) 89, 506, 1744
BseDI CCNNGG 4 cut(s) 87, 537, 609, 1743
BseGI GGATG 3 cut(s) 276, 2012, 2762
BseLI CCNNNNNNNGG 8 cut(s) 94, 217, 499, 544, 545, 1571, 2093, 2170
BseMI GCAATG 4 cut(s) 271, 1413, 2142, 2559
BseMII CTCAG 5 cut(s) 448, 1109, 1293, 1323, 1617
BseNI ACTGG 6 cut(s) 601, 673, 1030, 1430, 1783, 2117
BseRI GAGGAG 3 cut(s) 883, 2186, 2297
BseSI GKGCMC 3 cut(s) 104, 747, 2476
BseXI GCAGC 6 cut(s) 17, 591, 860, 1301, 1795, 1997
BsgI GTGCAG 2 cut(s) 1308, 1628
Bsh1236I CGCG 2 cut(s) 2345, 2746
Bsh1285I CGRYCG 1 cut(s) 1156
BsiEI CGRYCG 1 cut(s) 1156
BsiHKCI CYCGRG 1 cut(s) 2674
BsiSI CCGG 3 cut(s) 539, 2087, 2230
BslFI GGGAC 5 cut(s) 312, 1091, 1473, 1564, 2246
BslI CCNNNNNNNGG 8 cut(s) 94, 217, 499, 544, 545, 1571, 2093, 2170
BsmAI GTCTC 4 cut(s) 764, 1047, 1118, 2193
BsmFI GGGAC 5 cut(s) 312, 1091, 1473, 1564, 2246
BsmI GAATGC 2 cut(s) 963, 1704
Bso31I GGTCTC 1 cut(s) 1118
BsoBI CYCGRG 1 cut(s) 2674
Bsp120I GGGCCC 2 cut(s) 743, 2472
Bsp1286I GDGCHC 3 cut(s) 104, 747, 2476
Bsp1407I TGTACA 2 cut(s) 1355, 2734
Bsp143I GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
Bsp1720I GCTNAGC 1 cut(s) 2268
BspACI CCGC 6 cut(s) 212, 323, 384, 1541, 2619, 2781
BspCNI CTCAG 5 cut(s) 447, 1108, 1292, 1322, 1616
BspFNI CGCG 2 cut(s) 2345, 2746
BspHI TCATGA 1 cut(s) 1939
BspLI GGNNCC 5 cut(s) 745, 746, 2234, 2334, 2474
BspPI GGATC 3 cut(s) 173, 228, 2523
BspTI CTTAAG 2 cut(s) 802, 1802
BspTNI GGTCTC 1 cut(s) 1118
BsrDI GCAATG 4 cut(s) 271, 1413, 2142, 2559
BsrGI TGTACA 2 cut(s) 1355, 2734
BsrI ACTGG 6 cut(s) 601, 673, 1030, 1430, 1783, 2117
BssECI CCNNGG 4 cut(s) 87, 537, 609, 1743
BssMI GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
BssNAI GTATAC 1 cut(s) 1333
BssT1I CCWWGG 1 cut(s) 609
Bst1107I GTATAC 1 cut(s) 1333
Bst2UI CCWGG 3 cut(s) 89, 506, 1744
Bst4CI ACNGT 9 cut(s) 58, 333, 532, 928, 1058, 1154, 1337, 2384, 2734
Bst6I CTCTTC 3 cut(s) 1380, 2274, 2541
BstAFI CTTAAG 2 cut(s) 802, 1802
BstAPI GCANNNNNTGC 1 cut(s) 270
BstAUI TGTACA 2 cut(s) 1355, 2734
BstC8I GCNNGC 3 cut(s) 327, 726, 2633
BstENI CCTNNNNNAGG 1 cut(s) 2168
BstF5I GGATG 3 cut(s) 276, 2012, 2762
BstFNI CGCG 2 cut(s) 2345, 2746
BstHHI GCGC 1 cut(s) 2585
BstKTI GATC 8 cut(s) 181, 223, 937, 1075, 1204, 1756, 1771, 2518
BstMAI GTCTC 4 cut(s) 764, 1047, 1118, 2193
BstMBI GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
BstMCI CGRYCG 1 cut(s) 1156
BstMWI GCNNNNNNNGC 2 cut(s) 270, 510
BstNI CCWGG 3 cut(s) 89, 506, 1744
BstNSI RCATGY 2 cut(s) 1220, 2635
BstSCI CCNGG 6 cut(s) 87, 504, 537, 1742, 2085, 2229
BstSFI CTRYAG 2 cut(s) 707, 2319
BstSLI GKGCMC 3 cut(s) 104, 747, 2476
BstUI CGCG 2 cut(s) 2345, 2746
BstV1I GCAGC 6 cut(s) 17, 591, 860, 1301, 1795, 1997
BstV2I GAAGAC 2 cut(s) 1022, 2294
BstX2I RGATCY 4 cut(s) 934, 1072, 1753, 1768
BstXI CCANNNNNNTGG 1 cut(s) 402
BstYI RGATCY 4 cut(s) 934, 1072, 1753, 1768
BstZ17I GTATAC 1 cut(s) 1333
Bsu36I CCTNAGG 2 cut(s) 788, 1279
BsuI GTATCC 1 cut(s) 2318
BtsCI GGATG 3 cut(s) 276, 2012, 2762
BtsIMutI CAGTG 7 cut(s) 63, 329, 442, 594, 666, 1541, 1611
Cac8I GCNNGC 3 cut(s) 327, 726, 2633
CciI TCATGA 1 cut(s) 1939
CfoI GCGC 1 cut(s) 2585
Csp6I GTAC 6 cut(s) 226, 641, 1207, 1356, 2341, 2735
CviQI GTAC 6 cut(s) 226, 641, 1207, 1356, 2341, 2735
DpnI GATC 8 cut(s) 180, 222, 936, 1074, 1203, 1755, 1770, 2517
DpnII GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
DraI TTTAAA 2 cut(s) 1495, 1789
DraIII CACNNNGTG 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 993
Eam1104I CTCTTC 3 cut(s) 1380, 2274, 2541
EarI CTCTTC 3 cut(s) 1380, 2274, 2541
EciI GGCGGA 1 cut(s) 312
Eco130I CCWWGG 1 cut(s) 609
Eco147I AGGCCT 2 cut(s) 713, 2097
Eco24I GRGCYC 2 cut(s) 747, 2476
Eco31I GGTCTC 1 cut(s) 1118
Eco32I GATATC 2 cut(s) 1593, 2250
Eco47I GGWCC 3 cut(s) 455, 2233, 2778
Eco81I CCTNAGG 2 cut(s) 788, 1279
Eco88I CYCGRG 1 cut(s) 2674
EcoNI CCTNNNNNAGG 1 cut(s) 2168
EcoO109I RGGNCCY 5 cut(s) 455, 743, 744, 2233, 2473
EcoRI GAATTC 2 cut(s) 406, 1099
EcoRII CCWGG 3 cut(s) 87, 504, 1742
EcoRV GATATC 2 cut(s) 1593, 2250
EcoT14I CCWWGG 1 cut(s) 609
EcoT38I GRGCYC 2 cut(s) 747, 2476
ErhI CCWWGG 1 cut(s) 609
FalI AAGNNNNNCTT 4 cut(s) 17, 49, 732, 764
FaqI GGGAC 5 cut(s) 312, 1091, 1473, 1564, 2246
FauI CCCGC 2 cut(s) 219, 1534
FblI GTMKAC 2 cut(s) 1332, 2177
Fnu4HI GCNGC 6 cut(s) 6, 605, 874, 1290, 1809, 2011
FokI GGATG 3 cut(s) 263, 2019, 2749
FriOI GRGCYC 2 cut(s) 747, 2476
Fsp4HI GCNGC 6 cut(s) 6, 605, 874, 1290, 1809, 2011
FspBI CTAG 4 cut(s) 465, 756, 1883, 2803
GlaI GCGC 1 cut(s) 2584
GluI GCNGC 6 cut(s) 6, 605, 874, 1290, 1809, 2011
GsuI CTGGAG 2 cut(s) 527, 2319
HapII CCGG 3 cut(s) 539, 2087, 2230
HhaI GCGC 1 cut(s) 2585
Hin6I GCGC 1 cut(s) 2583
HinP1I GCGC 1 cut(s) 2583
HincII GTYRAC 2 cut(s) 559, 2178
HindII GTYRAC 2 cut(s) 559, 2178
HindIII AAGCTT 2 cut(s) 17, 1838
HinfI GANTC 5 cut(s) 568, 1575, 2174, 2179, 2717
HpaI GTTAAC 1 cut(s) 559
HpaII CCGG 3 cut(s) 539, 2087, 2230
HphI GGTGA 5 cut(s) 611, 821, 2586, 2674, 2699
Hpy166II GTNNAC 7 cut(s) 442, 559, 1333, 1867, 2178, 2380, 2753
Hpy8I GTNNAC 7 cut(s) 442, 559, 1333, 1867, 2178, 2380, 2753
HpyCH4III ACNGT 9 cut(s) 58, 333, 532, 928, 1058, 1154, 1337, 2384, 2734
HpyCH4IV ACGT 1 cut(s) 1420
HpyF10VI GCNNNNNNNGC 2 cut(s) 270, 510
HpySE526I ACGT 1 cut(s) 1420
HspAI GCGC 1 cut(s) 2583
KspAI GTTAAC 1 cut(s) 559
Kzo9I GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
LmnI GCTCC 5 cut(s) 870, 960, 1859, 2338, 2506
Lsp1109I GCAGC 6 cut(s) 17, 591, 860, 1301, 1795, 1997
LweI GCATC 4 cut(s) 711, 1264, 1997, 2758
MaeI CTAG 4 cut(s) 465, 756, 1883, 2803
MaeII ACGT 1 cut(s) 1420
MaeIII GTNAC 6 cut(s) 656, 1013, 1397, 1421, 2363, 2395
MalI GATC 8 cut(s) 180, 222, 936, 1074, 1203, 1755, 1770, 2517
MboI GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
MfeI CAATTG 3 cut(s) 149, 989, 1177
MflI RGATCY 4 cut(s) 934, 1072, 1753, 1768
MhlI GDGCHC 3 cut(s) 104, 747, 2476
MlsI TGGCCA 1 cut(s) 995
MluI ACGCGT 1 cut(s) 2343
MluNI TGGCCA 1 cut(s) 995
MlyI GAGTC 3 cut(s) 2173, 2183, 2711
MmeI TCCRAC 4 cut(s) 221, 399, 677, 1136
Mox20I TGGCCA 1 cut(s) 995
MroXI GAANNNNTTC 2 cut(s) 129, 1649
MscI TGGCCA 1 cut(s) 995
MslI CAYNNNNRTG 1 cut(s) 400
Msp20I TGGCCA 1 cut(s) 995
MspCI CTTAAG 2 cut(s) 802, 1802
MspI CCGG 3 cut(s) 539, 2087, 2230
MspR9I CCNGG 6 cut(s) 89, 506, 539, 1744, 2087, 2231
MunI CAATTG 3 cut(s) 149, 989, 1177
Mva1269I GAATGC 2 cut(s) 963, 1704
MvaI CCWGG 3 cut(s) 89, 506, 1744
MvnI CGCG 2 cut(s) 2345, 2746
MwoI GCNNNNNNNGC 2 cut(s) 270, 510
NciI CCSGG 3 cut(s) 539, 2087, 2231
NdeII GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
NlaIV GGNNCC 5 cut(s) 745, 746, 2234, 2334, 2474
NmuCI GTSAC 3 cut(s) 1397, 2363, 2395
NspI RCATGY 2 cut(s) 1220, 2635
PaeI GCATGC 1 cut(s) 2635
PagI TCATGA 1 cut(s) 1939
PceI AGGCCT 2 cut(s) 713, 2097
PctI GAATGC 2 cut(s) 963, 1704
PdmI GAANNNNTTC 2 cut(s) 129, 1649
PfeI GAWTC 2 cut(s) 568, 1575
PkrI GCNGC 6 cut(s) 7, 606, 875, 1291, 1810, 2012
PleI GAGTC 3 cut(s) 2173, 2182, 2711
PpsI GAGTC 3 cut(s) 2173, 2182, 2711
PpuMI RGGWCCY 2 cut(s) 455, 2233
Psp5II RGGWCCY 2 cut(s) 455, 2233
Psp6I CCWGG 3 cut(s) 87, 504, 1742
PspGI CCWGG 3 cut(s) 87, 504, 1742
PspN4I GGNNCC 5 cut(s) 745, 746, 2234, 2334, 2474
PspOMI GGGCCC 2 cut(s) 743, 2472
PspPPI RGGWCCY 2 cut(s) 455, 2233
PsuI RGATCY 4 cut(s) 934, 1072, 1753, 1768
RsaI GTAC 6 cut(s) 227, 642, 1208, 1357, 2342, 2736
RsaNI GTAC 6 cut(s) 226, 641, 1207, 1356, 2341, 2735
RseI CAYNNNNRTG 1 cut(s) 400
SalI GTCGAC 1 cut(s) 2176
SatI GCNGC 6 cut(s) 6, 605, 874, 1290, 1809, 2011
Sau3AI GATC 8 cut(s) 178, 220, 934, 1072, 1201, 1753, 1768, 2515
ScaI AGTACT 2 cut(s) 642, 1208
SchI GAGTC 3 cut(s) 2173, 2183, 2711
ScrFI CCNGG 6 cut(s) 89, 506, 539, 1744, 2087, 2231
SduI GDGCHC 3 cut(s) 104, 747, 2476
SfaNI GCATC 4 cut(s) 711, 1264, 1997, 2758
SfcI CTRYAG 2 cut(s) 707, 2319
SinI GGWCC 3 cut(s) 455, 2233, 2778
SmiMI CAYNNNNRTG 1 cut(s) 400
SmlI CTYRAG 2 cut(s) 802, 1802
SmoI CTYRAG 2 cut(s) 802, 1802
SphI GCATGC 1 cut(s) 2635
SseBI AGGCCT 2 cut(s) 713, 2097
SsiI CCGC 6 cut(s) 212, 323, 384, 1541, 2619, 2781
SspI AATATT 3 cut(s) 193, 982, 1388
SspMI CTAG 4 cut(s) 465, 756, 1883, 2803
StuI AGGCCT 2 cut(s) 713, 2097
StyD4I CCNGG 6 cut(s) 87, 504, 537, 1742, 2085, 2229
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 9 cut(s) 58, 333, 532, 928, 1058, 1154, 1337, 2384, 2734
TaiI ACGT 1 cut(s) 1423
TaqI TCGA 5 cut(s) 335, 1120, 1620, 2177, 2518
TatI WGTACW 5 cut(s) 225, 640, 1206, 1355, 2734
TfiI GAWTC 2 cut(s) 568, 1575
TscAI CASTG 7 cut(s) 63, 336, 442, 601, 673, 1541, 1611
TseFI GTSAC 3 cut(s) 1397, 2363, 2395
TseI GCWGC 6 cut(s) 5, 604, 873, 1289, 1808, 2010
Tsp45I GTSAC 3 cut(s) 1397, 2363, 2395
TspDTI ATGAA 8 cut(s) 132, 1380, 1460, 1642, 1968, 2058, 2183, 2751
TspGWI ACGGA 1 cut(s) 233
TspRI CASTG 7 cut(s) 63, 336, 442, 601, 673, 1541, 1611
Vha464I CTTAAG 2 cut(s) 802, 1802
VpaK11BI GGWCC 3 cut(s) 455, 2233, 2778
XagI CCTNNNNNAGG 1 cut(s) 2168
XapI RAATTY 8 cut(s) 169, 406, 422, 1099, 1111, 1649, 1790, 2449
XceI RCATGY 2 cut(s) 1220, 2635
XcmI CCANNNNNNNNNTGG 1 cut(s) 2078
XmiI GTMKAC 2 cut(s) 1332, 2177
XmnI GAANNNNTTC 2 cut(s) 129, 1649
XspI CTAG 4 cut(s) 465, 756, 1883, 2803
ZrmI AGTACT 2 cut(s) 642, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.