Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000134

Physical Location & Seq

Genomic Coordinates Reverse (-)

37590 .. 42166

Gene Structure 4577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0000300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGATCAATTGATGGTGGAAAAGTTGGCATCGGGCACGGGTGAGGGCGCAGCAGCCCCTCATCCTCAGCGGCGGCCAAGGGTGAGGGAGGTGAGCTCTAGGTTCATGTCTCCTGTGGCCGGTGATCCCTTTCCTACCAGATCACCTCTTCCTAAACATCAACAGGGACAGGGTGTCTCAACTCCAAGCCCGTACCTTGCAGAAAGACAGAGGTCATCCTCCGTGAATAGGCCACGGAGGCACTTGGACTTGGAGCCATTCCGCTGCTCTGACGAGAACAGGCCCGCCCGCCCCGAGTCTCCTCTGCCACCAGATCAGGCAAGGAAACAGCGTCCTGTCCCTGTCCCTGTCCCTTTTAAAGAGAACGGAGGAGGAGGAGGCAAACCCCAACAGCATCATCTTCCTAAAACTTGCCCTGGGAGAGTAAGCAATAATGCTTTTACTACACCCTCACGACCTGACACACCCATGGTGACTGCTAGTCTCGATAGGACAAGAATCAGACAGCGGTCTTCCAATTCCAATGTCAGTAGTGCCACAGCAGCTACTAAGCTCTTGCAATCTACCACTGAGGCCACCTCCAGTGACACTAATCACACTCAAATCACCAGAAGGTGTCTTCCTGATGTTCGCTCCTCCATGCCCGAGGCCGATATGTTGTTGCCGACTGTTTCCAGTAGACAGACGACCGAAAAAAGTTGTAACAGGCCTAATGCAACTGTCAATGGCAGCGATTTTTCAAAATTTTCTGCTTCCCCTTGCTCCCGTTCTCTCAACTTGCCACCGTCAAGCTCCGAGCACTTACTCTTCCAGTCAATCAAAGGCAGTGACAAATTAGAATCTGCTTTCTCCAAGCCATATGCAAATGCAGTGAAGATTGGCGGCCTCTGTCTGCCCCCAGTCCCACCATGTGCTAGTGCAAAGCCAGGTTCAGAAATAAGGAAAGGAAAGAAAGTTTCTAGTCTCCGAGAAGATGCTCATTCCTTGAGATTGCTGCAAAACCGCTATTTGCAGTGGAGATATGCCAATGCAACAGCACAGGCTTCCATGCTAGCTCAGCAGAGAGAGTCTGAGAGAACACATTATTCTCTTGCATTAAAGATAACAGAACTATATGATTCTGTGAAGAGAAAACGGATAGACCTTGGTGTTTTGCAAAGAACAAAGACTTTATCGACAATTCTTGAAGCTCAAATTCCATATTTGGATCAGTGGTTTTCTCTTCAAGAGGATTATTCAATTTCTCTGGCAGAAGCAACTCAAGCTTTGTTGAATGCATCACTCCGGCTTCCAATCAGCTCCAATGTTAAGGCTAATAAACAAGAGGTAGAAGAGGCACTGAACTCAGCAATGGAAGTGATGGAGAAAATAGTTTTCCATGTTCAGCAATCTATGCCGAAGGCAGAGGAAACAGACCATTTGATTTCGGATCTAGCAAGAGTGATTGGTGGAGAAAGAGCTTTCGTTGAAGAATGTGGAAATCTGTTGTCCAAGACATATACAACACAGGTGGAAGAGTGTAGCTTAAGGGGCCATATTATCCAGTTGAAACAACACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase_Tyr

Protein Analysis

520

Amino Acids

57.52

Weight (kDa)

9.51

Isoelectric Point (pI)

66.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QWRF	PF04484	177 - 489	5.7e-51	QWRF family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000134)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06801 FvH4_3g06801 FvH4_3g06810 FvH4_3g06830 FvH4_3g06840 FvH4_3g06840 FvH4_3g06840 FvH4_3g06860 FvH4_3g06860 FvH4_3g06900 FvH4_3g06920 FvH4_3g06940 FvH4_3g06960 FvH4_3g06991 FvH4_3g06991 FvH4_3g07041 FvH4_3g07042 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g07044 FvH4_3g20230 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_3g20240 FvH4_4g01431 FvH4_4g01431 FvH4_4g01520
malus_domestica	MD00G1006500.v1.1 MD00G1006600.v1.1 MD00G1186000.v1.1 MD05G1294300.v1.1 MD05G1294500.v1.1 MD05G1294700.v1.1 MD05G1294800.v1.1 MD05G1295100.v1.1 MD10G1272300.v1.1 MD10G1272800.v1.1 MD10G1273000.v1.1 MD10G1273200.v1.1 MD10G1273300.v1.1
prunus_persica	Prupe.4G069300_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069400_v2.0.a1 Prupe.4G069500_v2.0.a1 Prupe.4G069600_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069700_v2.0.a1 Prupe.4G069800_v2.0.a1
pyrus_communis	pycom05g27150 pycom10g22770 pycom10g22780 pycom10g22790 pycom10g22800 pycom11g23550 pycom11g23590
rosa_chinensis	RchiOBHm_Chr1g0336311 RchiOBHm_Chr3g0460871 RchiOBHm_Chr5g0012161 RchiOBHm_Chr5g0012181 RchiOBHm_Chr5g0012191 RchiOBHm_Chr5g0012201 RchiOBHm_Chr5g0012221 RchiOBHm_Chr5g0012241 RchiOBHm_Chr5g0012251 RchiOBHm_Chr5g0012261 RchiOBHm_Chr5g0012271 RchiOBHm_Chr5g0012291 RchiOBHm_Chr5g0012301 RchiOBHm_Chr5g0012321 RchiOBHm_Chr5g0034051 RchiOBHm_Chr5g0034071 RchiOBHm_Chr5g0034091 RchiOBHm_Chr5g0080321 RchiOBHm_Chr7g0226661
rosa_laevigata	RLG00000001709 RLG00000003039 RLG00000009208 RLG00000021256 RLG00000031886 RLG00000031891 RLG00000031892 RLG00000031895 RLG00000031896 RLG00000031897 RLG00000031898 RLG00000031899 RLG00000031900 RLG00000031903 RLG00000033520 RLG00000033522 RLG00000033524 RLG00000033525
rosa_multiflora	Rmu_co8172290.1_g000001 Rmu_co8214942.1_g000001 Rmu_co8328697.1_g000001 Rmu_sc0001608.1_g000041 Rmu_sc0003368.1_g000024 Rmu_sc0003701.1_g000002 Rmu_sc0003765.1_g000052 Rmu_sc0005343.1_g000007 Rmu_sc0005343.1_g000008 Rmu_sc0006603.1_g000004 Rmu_sc0007030.1_g000001 Rmu_sc0007030.1_g000006 Rmu_sc0007176.1_g000013 Rmu_sc0009761.1_g000006 Rmu_sc0009761.1_g000007 Rmu_sc0012149.1_g000012 Rmu_sc0013327.1_g000001 Rmu_sc0013327.1_g000003 Rmu_sc0014215.1_g000004 Rmu_ssc0000128.1_g000005 Rmu_ssc0000128.1_g000012 Rmu_ssc0000128.1_g000016 Rmu_ssc0000217.1_g000012 Rmu_ssc0000217.1_g000014 Rmu_ssc0000217.1_g000018 Rmu_ssc0000217.1_g000020 Rmu_ssc0000217.1_g000026 Rmu_ssc0000217.1_g000037
rosa_roxburghii	Rroxscaffold_1G00014960 Rroxscaffold_1G00046140 Rroxscaffold_1G00046190 Rroxscaffold_1G00064330 Rroxscaffold_1G00064370 Rroxscaffold_1G00064380 Rroxscaffold_1G00064390 Rroxscaffold_1G00064400 Rroxscaffold_1G00064420 Rroxscaffold_1G00064430 Rroxscaffold_1G00064460 Rroxscaffold_1G00064470 Rroxscaffold_1G00064480 Rroxscaffold_2G00092560 Rroxscaffold_3G00232520 Rroxscaffold_3G00236850 Rroxscaffold_4G00292720 Rroxscaffold_4G00315770 Rroxscaffold_4G00315780 Rroxscaffold_4G00315790
rosa_rugosa	Rorug01G0123800 Rorug01G0123900 Rorug01G0124000 Rorug01G0124000 Rorug03G0284000 Rorug04G0090200 Rorug05G0000200 Rorug05G0000200 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000300 Rorug05G0000400 Rorug05G0000600 Rorug05G0144300 Rorug05G0144300
rosa_samantha	Rh1CG135900 Rh2DG334300 Rh2DG334500 Rh5AG090300 Rh5AG093400 Rh5AG093500 Rh5AG093900 Rh5AG094000 Rh5AG094100 Rh5AG094200 Rh5AG094400 Rh5AG094600 Rh5AG100500 Rh5AG235400 Rh5AG235500 Rh5BG089400 Rh5BG412100 Rh5CG103100 Rh5CG103800 Rh5CG103900 Rh6AG058500 Rh6BG478600 Rh6CG484600 Rh7AG387000
rosa_wichuraiana	Rw0G004700 Rw1G011820 Rw5G007880 Rw5G008160 Rw5G008170 Rw5G008180 Rw5G008200 Rw5G008210 Rw5G008220 Rw5G008230 Rw5G008240 Rw5G008260 Rw5G021250 Rw5G021260 Rw5G021390 Rw5G021400 Rw5G021410 Rw5G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	679
AciI	CCGC	8 cut(s)	70, 73, 262, 285, 289, 508, 882, 1003
AclWI	GGATC	4 cut(s)	12, 119, 1215, 1437
AcoI	YGGCCR	2 cut(s)	74, 117
AcsI	RAATTY	2 cut(s)	743, 1194
AdeI	CACNNNGTG	1 cut(s)	911
AfaI	GTAC	1 cut(s)	194
AfiI	CCNNNNNNNGG	2 cut(s)	119, 228
AflII	CTTAAG	1 cut(s)	1525
AgsI	TTSAA	7 cut(s)	741, 1187, 1226, 1239, 1273, 1469, 1549
AhdI	GACNNNNNGTC	2 cut(s)	173, 480
AjnI	CCWGG	2 cut(s)	415, 925
Alw21I	GWGCWC	2 cut(s)	98, 801
Alw26I	GTCTC	5 cut(s)	114, 181, 303, 488, 968
AlwI	GGATC	4 cut(s)	12, 119, 1215, 1437
Ama87I	CYCGRG	2 cut(s)	293, 644
AoxI	GGCC	9 cut(s)	74, 117, 230, 281, 573, 648, 707, 883, 1531
ApeKI	GCWGC	6 cut(s)	50, 53, 264, 542, 729, 994
ApoI	RAATTY	2 cut(s)	743, 1194
AspLEI	GCGC	1 cut(s)	50
AspS9I	GGNCC	2 cut(s)	282, 1531
AsuHPI	GGTGA	7 cut(s)	53, 94, 103, 134, 135, 484, 598
AsuNHI	GCTAGC	1 cut(s)	1051
AvaI	CYCGRG	2 cut(s)	293, 644
BaeGI	GKGCMC	1 cut(s)	38
BanII	GRGCYC	1 cut(s)	98
BbsI	GAAGAC	2 cut(s)	504, 611
Bbv12I	GWGCWC	2 cut(s)	98, 801
BbvCI	CCTCAGC	1 cut(s)	66
BbvI	GCAGC	6 cut(s)	62, 65, 251, 554, 741, 981
BccI	CCATC	2 cut(s)	7, 1354
BciT130I	CCWGG	2 cut(s)	417, 927
BcoDI	GTCTC	5 cut(s)	114, 181, 303, 488, 968
BfaI	CTAG	6 cut(s)	99, 480, 915, 960, 1052, 1433
BfrI	CTTAAG	1 cut(s)	1525
BglI	GCCNNNNNGGC	1 cut(s)	238
BisI	GCNGC	9 cut(s)	51, 54, 71, 74, 265, 543, 730, 883, 995
BlpI	GCTNAGC	1 cut(s)	1056
BlsI	GCNGC	9 cut(s)	52, 55, 72, 75, 266, 544, 731, 884, 996
Bme1390I	CCNGG	2 cut(s)	417, 927
BmeRI	GACNNNNNGTC	2 cut(s)	173, 480
BmeT110I	CYCGRG	2 cut(s)	293, 644
BmgT120I	GGNCC	2 cut(s)	282, 1531
BmiI	GGNNCC	2 cut(s)	255, 1532
BmrFI	CCNGG	2 cut(s)	417, 927
BmrI	ACTGGG	1 cut(s)	893
BmsI	GCATC	4 cut(s)	38, 403, 964, 1286
BmtI	GCTAGC	1 cut(s)	1055
BmuI	ACTGGG	1 cut(s)	893
BoxI	GACNNNNGTC	2 cut(s)	211, 508
BpiI	GAAGAC	2 cut(s)	504, 611
BplI	GAGNNNNNCTC	4 cut(s)	80, 112, 563, 595
BpmI	CTGGAG	1 cut(s)	565
Bpu10I	CCTNAGC	1 cut(s)	66
Bpu1102I	GCTNAGC	1 cut(s)	1056
BpuEI	CTTGAG	2 cut(s)	1006, 1245
BsaJI	CCNNGG	7 cut(s)	77, 233, 415, 416, 468, 645, 1144
Bsc4I	CCNNNNNNNGG	2 cut(s)	119, 228
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	5 cut(s)	582, 675, 811, 899, 1543
Bse3DI	GCAATG	1 cut(s)	1356
BseBI	CCWGG	2 cut(s)	417, 927
BseDI	CCNNGG	7 cut(s)	77, 233, 415, 416, 468, 645, 1144
BseGI	GGATG	2 cut(s)	61, 215
BseLI	CCNNNNNNNGG	2 cut(s)	119, 228
BseMI	GCAATG	1 cut(s)	1356
BseMII	CTCAG	5 cut(s)	80, 561, 1062, 1070, 1359
BseNI	ACTGG	5 cut(s)	582, 675, 811, 899, 1543
BseRI	GAGGAG	5 cut(s)	291, 384, 387, 390, 625
BseSI	GKGCMC	1 cut(s)	38
BseXI	GCAGC	6 cut(s)	62, 65, 251, 554, 741, 981
Bsh1285I	CGRYCG	1 cut(s)	690
BshFI	GGCC	9 cut(s)	76, 119, 232, 283, 575, 650, 709, 885, 1533
BsiEI	CGRYCG	1 cut(s)	690
BsiHKAI	GWGCWC	2 cut(s)	98, 801
BsiHKCI	CYCGRG	2 cut(s)	293, 644
BsiSI	CCGG	2 cut(s)	120, 1285
BslFI	GGGAC	5 cut(s)	180, 323, 329, 335, 887
BslI	CCNNNNNNNGG	2 cut(s)	119, 228
BsmAI	GTCTC	5 cut(s)	114, 181, 303, 488, 968
BsmFI	GGGAC	5 cut(s)	180, 323, 329, 335, 887
BsmI	GAATGC	1 cut(s)	1279
BsnI	GGCC	9 cut(s)	76, 119, 232, 283, 575, 650, 709, 885, 1533
BsoBI	CYCGRG	2 cut(s)	293, 644
Bsp1286I	GDGCHC	3 cut(s)	38, 98, 801
Bsp143I	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
Bsp1720I	GCTNAGC	1 cut(s)	1056
Bsp19I	CCATGG	1 cut(s)	468
BspACI	CCGC	8 cut(s)	70, 73, 262, 285, 289, 508, 882, 1003
BspANI	GGCC	9 cut(s)	76, 119, 232, 283, 575, 650, 709, 885, 1533
BspCNI	CTCAG	5 cut(s)	79, 562, 1063, 1069, 1358
BspLI	GGNNCC	2 cut(s)	255, 1532
BspOI	GCTAGC	1 cut(s)	1055
BspPI	GGATC	4 cut(s)	12, 119, 1215, 1437
BspTI	CTTAAG	1 cut(s)	1525
BsrDI	GCAATG	1 cut(s)	1356
BsrFI	RCCGGY	1 cut(s)	119
BsrI	ACTGG	5 cut(s)	582, 675, 811, 899, 1543
BssAI	RCCGGY	1 cut(s)	119
BssECI	CCNNGG	7 cut(s)	77, 233, 415, 416, 468, 645, 1144
BssMI	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
BssT1I	CCWWGG	3 cut(s)	77, 468, 1144
Bst2UI	CCWGG	2 cut(s)	417, 927
Bst4CI	ACNGT	3 cut(s)	670, 721, 786
Bst6I	CTCTTC	6 cut(s)	153, 812, 1121, 1227, 1326, 1509
BstAFI	CTTAAG	1 cut(s)	1525
BstAPI	GCANNNNNTGC	1 cut(s)	1393
BstC8I	GCNNGC	3 cut(s)	285, 289, 1053
BstDEI	CTNAG	6 cut(s)	66, 549, 570, 1056, 1071, 1345
BstDSI	CCRYGG	2 cut(s)	233, 468
BstF5I	GGATG	2 cut(s)	61, 215
BstHHI	GCGC	1 cut(s)	50
BstKTI	GATC	6 cut(s)	7, 127, 143, 316, 1210, 1432
BstMAI	GTCTC	5 cut(s)	114, 181, 303, 488, 968
BstMBI	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
BstMCI	CGRYCG	1 cut(s)	690
BstMWI	GCNNNNNNNGC	6 cut(s)	238, 542, 1057, 1262, 1393, 1530
BstNI	CCWGG	2 cut(s)	417, 927
BstPAI	GACNNNNGTC	2 cut(s)	211, 508
BstSCI	CCNGG	2 cut(s)	415, 925
BstSLI	GKGCMC	1 cut(s)	38
BstV1I	GCAGC	6 cut(s)	62, 65, 251, 554, 741, 981
BstV2I	GAAGAC	2 cut(s)	504, 611
BstX2I	RGATCY	1 cut(s)	1429
BstYI	RGATCY	1 cut(s)	1429
BsuRI	GGCC	9 cut(s)	76, 119, 232, 283, 575, 650, 709, 885, 1533
BtgI	CCRYGG	2 cut(s)	233, 468
BtsCI	GGATG	2 cut(s)	61, 215
BtsI	GCAGTG	3 cut(s)	832, 876, 1019
BtsIMutI	CAGTG	7 cut(s)	567, 589, 832, 876, 1019, 1217, 1337
Cac8I	GCNNGC	3 cut(s)	285, 289, 1053
CfoI	GCGC	1 cut(s)	50
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	2 cut(s)	282, 1531
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	1 cut(s)	193
CspCI	CAANNNNNGTGG	2 cut(s)	1491, 1526
CviAII	CATG	6 cut(s)	106, 469, 640, 909, 1048, 1379
CviQI	GTAC	1 cut(s)	193
DdeI	CTNAG	6 cut(s)	66, 549, 570, 1056, 1071, 1345
DpnI	GATC	6 cut(s)	6, 126, 142, 315, 1209, 1431
DpnII	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
DraI	TTTAAA	1 cut(s)	358
DraIII	CACNNNGTG	1 cut(s)	911
DriI	GACNNNNNGTC	2 cut(s)	173, 480
EaeI	YGGCCR	2 cut(s)	74, 117
Eam1104I	CTCTTC	6 cut(s)	153, 812, 1121, 1227, 1326, 1509
Eam1105I	GACNNNNNGTC	2 cut(s)	173, 480
EarI	CTCTTC	6 cut(s)	153, 812, 1121, 1227, 1326, 1509
Ecl136II	GAGCTC	1 cut(s)	96
Eco130I	CCWWGG	3 cut(s)	77, 468, 1144
Eco147I	AGGCCT	1 cut(s)	709
Eco24I	GRGCYC	1 cut(s)	98
Eco53kI	GAGCTC	1 cut(s)	96
Eco88I	CYCGRG	2 cut(s)	293, 644
EcoICRI	GAGCTC	1 cut(s)	96
EcoRII	CCWGG	2 cut(s)	415, 925
EcoT14I	CCWWGG	3 cut(s)	77, 468, 1144
EcoT22I	ATGCAT	1 cut(s)	1279
EcoT38I	GRGCYC	1 cut(s)	98
ErhI	CCWWGG	3 cut(s)	77, 468, 1144
FaeI	CATG	6 cut(s)	109, 472, 643, 912, 1051, 1382
FaqI	GGGAC	5 cut(s)	180, 323, 329, 335, 887
FatI	CATG	6 cut(s)	105, 468, 639, 908, 1047, 1378
FauI	CCCGC	2 cut(s)	292, 296
FauNDI	CATATG	1 cut(s)	859
FblI	GTMKAC	1 cut(s)	679
Fnu4HI	GCNGC	9 cut(s)	51, 54, 71, 74, 265, 543, 730, 883, 995
FokI	GGATG	2 cut(s)	48, 202
FriOI	GRGCYC	1 cut(s)	98
Fsp4HI	GCNGC	9 cut(s)	51, 54, 71, 74, 265, 543, 730, 883, 995
FspBI	CTAG	6 cut(s)	99, 480, 915, 960, 1052, 1433
GlaI	GCGC	1 cut(s)	49
GluI	GCNGC	9 cut(s)	51, 54, 71, 74, 265, 543, 730, 883, 995
GsuI	CTGGAG	1 cut(s)	565
HaeIII	GGCC	9 cut(s)	76, 119, 232, 283, 575, 650, 709, 885, 1533
HapII	CCGG	2 cut(s)	120, 1285
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	1 cut(s)	50
Hin1II	CATG	6 cut(s)	109, 472, 643, 912, 1051, 1382
Hin6I	GCGC	1 cut(s)	48
HinP1I	GCGC	1 cut(s)	48
HindIII	AAGCTT	1 cut(s)	1263
HinfI	GANTC	5 cut(s)	296, 498, 839, 1067, 1118
HpaII	CCGG	2 cut(s)	120, 1285
HphI	GGTGA	7 cut(s)	53, 94, 103, 134, 135, 484, 598
Hpy166II	GTNNAC	1 cut(s)	680
Hpy188I	TCNGA	7 cut(s)	271, 503, 796, 934, 968, 1072, 1429
Hpy188III	TCNNGA	5 cut(s)	453, 485, 623, 1184, 1226
Hpy8I	GTNNAC	1 cut(s)	680
HpyAV	CCTTC	2 cut(s)	606, 1393
HpyCH4III	ACNGT	3 cut(s)	670, 721, 786
HpyF10VI	GCNNNNNNNGC	6 cut(s)	238, 542, 1057, 1262, 1393, 1530
HpyF3I	CTNAG	6 cut(s)	66, 549, 570, 1056, 1071, 1345
Hsp92II	CATG	6 cut(s)	109, 472, 643, 912, 1051, 1382
HspAI	GCGC	1 cut(s)	48
Kzo9I	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
LmnI	GCTCC	5 cut(s)	253, 638, 767, 797, 1304
Lsp1109I	GCAGC	6 cut(s)	62, 65, 251, 554, 741, 981
LweI	GCATC	4 cut(s)	38, 403, 964, 1286
MaeI	CTAG	6 cut(s)	99, 480, 915, 960, 1052, 1433
MaeIII	GTNAC	4 cut(s)	472, 584, 701, 827
MalI	GATC	6 cut(s)	6, 126, 142, 315, 1209, 1431
MboI	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
MfeI	CAATTG	1 cut(s)	8
MflI	RGATCY	1 cut(s)	1429
MhlI	GDGCHC	3 cut(s)	38, 98, 801
MluCI	AATT	7 cut(s)	8, 517, 743, 833, 1179, 1194, 1239
MlyI	GAGTC	2 cut(s)	305, 1076
Mph1103I	ATGCAT	1 cut(s)	1279
MseI	TTAA	4 cut(s)	357, 1097, 1308, 1526
MslI	CAYNNNNRTG	1 cut(s)	467
MspA1I	CMGCKG	3 cut(s)	70, 264, 508
MspCI	CTTAAG	1 cut(s)	1525
MspI	CCGG	2 cut(s)	120, 1285
MspR9I	CCNGG	2 cut(s)	417, 927
MunI	CAATTG	1 cut(s)	8
Mva1269I	GAATGC	1 cut(s)	1279
MvaI	CCWGG	2 cut(s)	417, 927
MwoI	GCNNNNNNNGC	6 cut(s)	238, 542, 1057, 1262, 1393, 1530
NcoI	CCATGG	1 cut(s)	468
NdeI	CATATG	1 cut(s)	859
NdeII	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
NheI	GCTAGC	1 cut(s)	1051
NlaIII	CATG	6 cut(s)	109, 472, 643, 912, 1051, 1382
NlaIV	GGNNCC	2 cut(s)	255, 1532
NmuCI	GTSAC	3 cut(s)	472, 584, 827
NsiI	ATGCAT	1 cut(s)	1279
PasI	CCCWGGG	1 cut(s)	416
PceI	AGGCCT	1 cut(s)	709
PctI	GAATGC	1 cut(s)	1279
PfeI	GAWTC	3 cut(s)	498, 839, 1118
PkrI	GCNGC	9 cut(s)	52, 55, 72, 75, 266, 544, 731, 884, 996
PleI	GAGTC	2 cut(s)	304, 1075
PpsI	GAGTC	2 cut(s)	304, 1075
PshAI	GACNNNNGTC	2 cut(s)	211, 508
Psp124BI	GAGCTC	1 cut(s)	98
Psp6I	CCWGG	2 cut(s)	415, 925
PspGI	CCWGG	2 cut(s)	415, 925
PspN4I	GGNNCC	2 cut(s)	255, 1532
PspPI	GGNCC	2 cut(s)	282, 1531
PsuI	RGATCY	1 cut(s)	1429
RsaI	GTAC	1 cut(s)	194
RsaNI	GTAC	1 cut(s)	193
RseI	CAYNNNNRTG	1 cut(s)	467
SacI	GAGCTC	1 cut(s)	98
SaqAI	TTAA	4 cut(s)	357, 1097, 1308, 1526
SatI	GCNGC	9 cut(s)	51, 54, 71, 74, 265, 543, 730, 883, 995
Sau3AI	GATC	6 cut(s)	4, 124, 140, 313, 1207, 1429
Sau96I	GGNCC	2 cut(s)	282, 1531
SchI	GAGTC	2 cut(s)	305, 1076
ScrFI	CCNGG	2 cut(s)	417, 927
SduI	GDGCHC	3 cut(s)	38, 98, 801
SfaNI	GCATC	4 cut(s)	38, 403, 964, 1286
SmiMI	CAYNNNNRTG	1 cut(s)	467
SmlI	CTYRAG	3 cut(s)	985, 1260, 1525
SmoI	CTYRAG	3 cut(s)	985, 1260, 1525
Sse9I	AATT	7 cut(s)	8, 517, 743, 833, 1179, 1194, 1239
SseBI	AGGCCT	1 cut(s)	709
SsiI	CCGC	8 cut(s)	70, 73, 262, 285, 289, 508, 882, 1003
SspMI	CTAG	6 cut(s)	99, 480, 915, 960, 1052, 1433
SstI	GAGCTC	1 cut(s)	98
StuI	AGGCCT	1 cut(s)	709
StyD4I	CCNGG	2 cut(s)	415, 925
StyI	CCWWGG	3 cut(s)	77, 468, 1144
TaaI	ACNGT	3 cut(s)	670, 721, 786
TaqI	TCGA	2 cut(s)	486, 1175
TaqII	GACCGA	1 cut(s)	704
TasI	AATT	7 cut(s)	8, 517, 743, 833, 1179, 1194, 1239
TauI	GCSGC	3 cut(s)	73, 76, 885
TfiI	GAWTC	3 cut(s)	498, 839, 1118
Tru1I	TTAA	4 cut(s)	357, 1097, 1308, 1526
Tru9I	TTAA	4 cut(s)	357, 1097, 1308, 1526
TscAI	CASTG	7 cut(s)	574, 589, 832, 876, 1019, 1217, 1344
TseFI	GTSAC	3 cut(s)	472, 584, 827
TseI	GCWGC	6 cut(s)	50, 53, 264, 542, 729, 994
Tsp45I	GTSAC	3 cut(s)	472, 584, 827
TspDTI	ATGAA	1 cut(s)	94
TspGWI	ACGGA	4 cut(s)	211, 250, 381, 1150
TspRI	CASTG	7 cut(s)	574, 589, 832, 876, 1019, 1217, 1344
Vha464I	CTTAAG	1 cut(s)	1525
XapI	RAATTY	2 cut(s)	743, 1194
XmiI	GTMKAC	1 cut(s)	679
XspI	CTAG	6 cut(s)	99, 480, 915, 960, 1052, 1433
Zsp2I	ATGCAT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.