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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52950 AT5G52950 |
| fragaria_vesca | FvH4_7g30790 |
| malus_domestica | MD01G1213200.v1.1 MD01G1213400.v1.1 MD07G1283200.v1.1 |
| prunus_persica | Prupe.2G305400_v2.0.a1 |
| pyrus_communis | pycom01g22430 pycom07g25730 |
| rosa_chinensis | RchiOBHm_Chr1g0379731 |
| rosa_laevigata | RLG00000026358 RLG00000026362 |
| rosa_multiflora | Rmu_co8427163.1_g000001 Rmu_sc0013028.1_g000010 Rmu_sc0014259.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00279930 |
| rosa_rugosa | Rorug01G0415100 |
| rosa_samantha | Rh1AG438600 Rh1AG439100 Rh1BG395100 Rh1CG408200 Rh1CG408400 Rh1DG425500 Rh1DG426000 Rh6CG162800 Rh6DG154400 Rh7CG443300 |
| rosa_wichuraiana | Rw1G038200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1659 |
| Acc16I | TGCGCA | 1 cut(s) | 870 |
| Acc36I | ACCTGC | 1 cut(s) | 2409 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2016, 2751 |
| AccI | GTMKAC | 2 cut(s) | 1352, 1971 |
| AccII | CGCG | 1 cut(s) | 324 |
| AccIII | TCCGGA | 1 cut(s) | 2253 |
| AclI | AACGTT | 1 cut(s) | 2902 |
| AclWI | GGATC | 6 cut(s) | 320, 407, 1127, 2126, 2532, 2853 |
| AcsI | RAATTY | 8 cut(s) | 515, 1003, 1048, 1111, 1555, 1846, 2002, 2346 |
| AcuI | CTGAAG | 1 cut(s) | 2679 |
| AfaI | GTAC | 2 cut(s) | 1097, 2423 |
| AfeI | AGCGCT | 1 cut(s) | 2656 |
| AjnI | CCWGG | 6 cut(s) | 392, 1074, 1165, 1646, 1746, 2991 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1469, 1501 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2208, 2240 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 384 |
| Alw26I | GTCTC | 5 cut(s) | 493, 692, 884, 2423, 2622 |
| Alw44I | GTGCAC | 1 cut(s) | 380 |
| AlwI | GGATC | 6 cut(s) | 320, 407, 1127, 2126, 2532, 2853 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2424 |
| Ama87I | CYCGRG | 3 cut(s) | 342, 809, 881 |
| Aor13HI | TCCGGA | 1 cut(s) | 2253 |
| Aor51HI | AGCGCT | 1 cut(s) | 2656 |
| AoxI | GGCC | 6 cut(s) | 268, 1120, 1499, 1980, 1986, 2778 |
| ApaI | GGGCCC | 1 cut(s) | 2782 |
| ApaLI | GTGCAC | 1 cut(s) | 380 |
| ApeKI | GCWGC | 6 cut(s) | 52, 214, 337, 968, 1601, 2919 |
| ApoI | RAATTY | 8 cut(s) | 515, 1003, 1048, 1111, 1555, 1846, 2002, 2346 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1413 |
| AspLEI | GCGC | 5 cut(s) | 57, 372, 871, 1267, 2657 |
| AspS9I | GGNCC | 8 cut(s) | 269, 397, 1120, 1489, 1499, 1980, 2778, 2779 |
| AsuC2I | CCSGG | 3 cut(s) | 267, 343, 344 |
| AsuHPI | GGTGA | 7 cut(s) | 109, 548, 680, 1181, 1409, 2387, 2624 |
| AsuII | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| AvaI | CYCGRG | 3 cut(s) | 342, 809, 881 |
| AvaII | GGWCC | 2 cut(s) | 397, 1489 |
| BaeGI | GKGCMC | 2 cut(s) | 384, 2782 |
| BanII | GRGCYC | 3 cut(s) | 20, 2728, 2782 |
| BauI | CACGAG | 1 cut(s) | 377 |
| BbsI | GAAGAC | 1 cut(s) | 2653 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 384 |
| BbvI | GCAGC | 6 cut(s) | 64, 201, 324, 980, 1613, 2931 |
| BccI | CCATC | 7 cut(s) | 152, 735, 1169, 1510, 1768, 2251, 2745 |
| BceAI | ACGGC | 3 cut(s) | 58, 119, 2947 |
| BciT130I | CCWGG | 6 cut(s) | 394, 1076, 1167, 1648, 1748, 2993 |
| BcnI | CCSGG | 3 cut(s) | 267, 343, 344 |
| BcoDI | GTCTC | 5 cut(s) | 493, 692, 884, 2423, 2622 |
| BfaI | CTAG | 6 cut(s) | 71, 960, 992, 1217, 1226, 1713 |
| BfmI | CTRYAG | 1 cut(s) | 1518 |
| BfoI | RGCGCY | 2 cut(s) | 1268, 2658 |
| BfuAI | ACCTGC | 1 cut(s) | 2409 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1273 |
| BglII | AGATCT | 2 cut(s) | 885, 1573 |
| Bme1390I | CCNGG | 9 cut(s) | 267, 343, 344, 394, 1076, 1167, 1648, 1748, 2993 |
| Bme18I | GGWCC | 2 cut(s) | 397, 1489 |
| BmeT110I | CYCGRG | 3 cut(s) | 342, 809, 881 |
| BmgT120I | GGNCC | 8 cut(s) | 269, 397, 1120, 1489, 1499, 1980, 2778, 2779 |
| BmiI | GGNNCC | 6 cut(s) | 271, 398, 399, 1981, 2780, 2781 |
| BmrFI | CCNGG | 9 cut(s) | 267, 343, 344, 394, 1076, 1167, 1648, 1748, 2993 |
| BmrI | ACTGGG | 1 cut(s) | 1506 |
| BmsI | GCATC | 8 cut(s) | 14, 66, 341, 595, 967, 1662, 2192, 2745 |
| BmuI | ACTGGG | 1 cut(s) | 1506 |
| BpiI | GAAGAC | 1 cut(s) | 2653 |
| BpmI | CTGGAG | 2 cut(s) | 2381, 2401 |
| Bpu14I | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| BpuEI | CTTGAG | 2 cut(s) | 1306, 2691 |
| BpuMI | CCSGG | 3 cut(s) | 267, 343, 344 |
| Bsa29I | ATCGAT | 1 cut(s) | 2536 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2532 |
| BsaJI | CCNNGG | 8 cut(s) | 265, 341, 342, 393, 1647, 1746, 1983, 2136 |
| BsaWI | WCCGGW | 1 cut(s) | 2253 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1305, 1335 |
| Bse1I | ACTGG | 5 cut(s) | 763, 1345, 1501, 2384, 3004 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2532 |
| BseAI | TCCGGA | 1 cut(s) | 2253 |
| BseBI | CCWGG | 6 cut(s) | 394, 1076, 1167, 1648, 1748, 2993 |
| BseCI | ATCGAT | 1 cut(s) | 2536 |
| BseDI | CCNNGG | 8 cut(s) | 265, 341, 342, 393, 1647, 1746, 1983, 2136 |
| BseJI | GATNNNNATC | 1 cut(s) | 2532 |
| BseMII | CTCAG | 5 cut(s) | 561, 1436, 1629, 2097, 2117 |
| BseNI | ACTGG | 5 cut(s) | 763, 1345, 1501, 2384, 3004 |
| BseRI | GAGGAG | 6 cut(s) | 56, 77, 116, 150, 190, 2728 |
| BseSI | GKGCMC | 2 cut(s) | 384, 2782 |
| BseXI | GCAGC | 6 cut(s) | 64, 201, 324, 980, 1613, 2931 |
| BseYI | CCCAGC | 3 cut(s) | 103, 636, 2922 |
| Bsh1236I | CGCG | 1 cut(s) | 324 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1720 |
| BshFI | GGCC | 6 cut(s) | 270, 1122, 1501, 1982, 1988, 2780 |
| BshVI | ATCGAT | 1 cut(s) | 2536 |
| BsiEI | CGRYCG | 1 cut(s) | 1720 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 384 |
| BsiHKCI | CYCGRG | 3 cut(s) | 342, 809, 881 |
| BsiSI | CCGG | 5 cut(s) | 21, 267, 329, 343, 2254 |
| BslFI | GGGAC | 3 cut(s) | 410, 1309, 2606 |
| BsmAI | GTCTC | 5 cut(s) | 493, 692, 884, 2423, 2622 |
| BsmBI | CGTCTC | 2 cut(s) | 493, 692 |
| BsmFI | GGGAC | 3 cut(s) | 410, 1309, 2606 |
| BsmI | GAATGC | 5 cut(s) | 565, 920, 1252, 1483, 1513 |
| BsnI | GGCC | 6 cut(s) | 270, 1122, 1501, 1982, 1988, 2780 |
| BsoBI | CYCGRG | 3 cut(s) | 342, 809, 881 |
| Bsp119I | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| Bsp120I | GGGCCC | 1 cut(s) | 2778 |
| Bsp1286I | GDGCHC | 4 cut(s) | 20, 384, 2728, 2782 |
| Bsp13I | TCCGGA | 1 cut(s) | 2253 |
| BspANI | GGCC | 6 cut(s) | 270, 1122, 1501, 1982, 1988, 2780 |
| BspCNI | CTCAG | 5 cut(s) | 562, 1435, 1628, 2098, 2118 |
| BspDI | ATCGAT | 1 cut(s) | 2536 |
| BspEI | TCCGGA | 1 cut(s) | 2253 |
| BspFNI | CGCG | 1 cut(s) | 324 |
| BspLI | GGNNCC | 6 cut(s) | 271, 398, 399, 1981, 2780, 2781 |
| BspMAI | CTGCAG | 1 cut(s) | 1522 |
| BspMI | ACCTGC | 1 cut(s) | 2409 |
| BspPI | GGATC | 6 cut(s) | 320, 407, 1127, 2126, 2532, 2853 |
| BspT104I | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| BsrI | ACTGG | 5 cut(s) | 763, 1345, 1501, 2384, 3004 |
| BssECI | CCNNGG | 8 cut(s) | 265, 341, 342, 393, 1647, 1746, 1983, 2136 |
| BssSI | CACGAG | 1 cut(s) | 377 |
| BssT1I | CCWWGG | 2 cut(s) | 1983, 2136 |
| Bst2BI | CACGAG | 1 cut(s) | 377 |
| Bst2UI | CCWGG | 6 cut(s) | 394, 1076, 1167, 1648, 1748, 2993 |
| Bst4CI | ACNGT | 8 cut(s) | 506, 1378, 1563, 1858, 2426, 2481, 2522, 2954 |
| Bst6I | CTCTTC | 5 cut(s) | 1247, 1532, 1626, 2625, 2655 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2291 |
| BstBI | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| BstC8I | GCNNGC | 4 cut(s) | 374, 2689, 2912, 2960 |
| BstDEI | CTNAG | 6 cut(s) | 570, 889, 1422, 1615, 2106, 2126 |
| BstFNI | CGCG | 1 cut(s) | 324 |
| BstH2I | RGCGCY | 2 cut(s) | 1268, 2658 |
| BstHHI | GCGC | 5 cut(s) | 57, 372, 871, 1267, 2657 |
| BstMAI | GTCTC | 5 cut(s) | 493, 692, 884, 2423, 2622 |
| BstMCI | CGRYCG | 1 cut(s) | 1720 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 977, 1273, 2291, 2764, 2827, 2916, 2964 |
| BstNI | CCWGG | 6 cut(s) | 394, 1076, 1167, 1648, 1748, 2993 |
| BstSCI | CCNGG | 9 cut(s) | 265, 341, 342, 392, 1074, 1165, 1646, 1746, 2991 |
| BstSFI | CTRYAG | 1 cut(s) | 1518 |
| BstSLI | GKGCMC | 2 cut(s) | 384, 2782 |
| BstUI | CGCG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 6 cut(s) | 64, 201, 324, 980, 1613, 2931 |
| BstV2I | GAAGAC | 1 cut(s) | 2653 |
| BstX2I | RGATCY | 3 cut(s) | 885, 1573, 2131 |
| BstYI | RGATCY | 3 cut(s) | 885, 1573, 2131 |
| Bsu15I | ATCGAT | 1 cut(s) | 2536 |
| BsuRI | GGCC | 6 cut(s) | 270, 1122, 1501, 1982, 1988, 2780 |
| BsuTUI | ATCGAT | 1 cut(s) | 2536 |
| BtgZI | GCGATG | 1 cut(s) | 318 |
| BtsI | GCAGTG | 1 cut(s) | 2145 |
| BtsIMutI | CAGTG | 5 cut(s) | 635, 756, 1338, 2145, 2527 |
| BveI | ACCTGC | 1 cut(s) | 2409 |
| Cac8I | GCNNGC | 4 cut(s) | 374, 2689, 2912, 2960 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2424 |
| CfoI | GCGC | 5 cut(s) | 57, 372, 871, 1267, 2657 |
| Cfr13I | GGNCC | 8 cut(s) | 269, 397, 1120, 1489, 1499, 1980, 2778, 2779 |
| Cfr9I | CCCGGG | 1 cut(s) | 342 |
| ClaI | ATCGAT | 1 cut(s) | 2536 |
| CsiI | ACCWGGT | 1 cut(s) | 1165 |
| Csp6I | GTAC | 2 cut(s) | 1096, 2422 |
| CviAII | CATG | 6 cut(s) | 1063, 1581, 1802, 2684, 2859, 2907 |
| CviQI | GTAC | 2 cut(s) | 1096, 2422 |
| DdeI | CTNAG | 6 cut(s) | 570, 889, 1422, 1615, 2106, 2126 |
| DraI | TTTAAA | 1 cut(s) | 2836 |
| Eam1104I | CTCTTC | 5 cut(s) | 1247, 1532, 1626, 2625, 2655 |
| EarI | CTCTTC | 5 cut(s) | 1247, 1532, 1626, 2625, 2655 |
| EciI | GGCGGA | 1 cut(s) | 157 |
| Ecl136II | GAGCTC | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 2 cut(s) | 1983, 2136 |
| Eco24I | GRGCYC | 3 cut(s) | 20, 2728, 2782 |
| Eco32I | GATATC | 1 cut(s) | 2143 |
| Eco47I | GGWCC | 2 cut(s) | 397, 1489 |
| Eco47III | AGCGCT | 1 cut(s) | 2656 |
| Eco53kI | GAGCTC | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 1 cut(s) | 2679 |
| Eco88I | CYCGRG | 3 cut(s) | 342, 809, 881 |
| EcoICRI | GAGCTC | 1 cut(s) | 18 |
| EcoO109I | RGGNCCY | 3 cut(s) | 397, 1980, 2779 |
| EcoRI | GAATTC | 2 cut(s) | 515, 2002 |
| EcoRII | CCWGG | 6 cut(s) | 392, 1074, 1165, 1646, 1746, 2991 |
| EcoRV | GATATC | 1 cut(s) | 2143 |
| EcoT14I | CCWWGG | 2 cut(s) | 1983, 2136 |
| EcoT22I | ATGCAT | 1 cut(s) | 610 |
| EcoT38I | GRGCYC | 3 cut(s) | 20, 2728, 2782 |
| ErhI | CCWWGG | 2 cut(s) | 1983, 2136 |
| Esp3I | CGTCTC | 2 cut(s) | 493, 692 |
| FaeI | CATG | 6 cut(s) | 1066, 1584, 1805, 2687, 2862, 2910 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1109, 1141 |
| FaqI | GGGAC | 3 cut(s) | 410, 1309, 2606 |
| FatI | CATG | 6 cut(s) | 1062, 1580, 1801, 2683, 2858, 2906 |
| FauI | CCCGC | 1 cut(s) | 319 |
| FblI | GTMKAC | 2 cut(s) | 1352, 1971 |
| FriOI | GRGCYC | 3 cut(s) | 20, 2728, 2782 |
| FspBI | CTAG | 6 cut(s) | 71, 960, 992, 1217, 1226, 1713 |
| FspI | TGCGCA | 1 cut(s) | 870 |
| GlaI | GCGC | 5 cut(s) | 56, 371, 870, 1266, 2656 |
| GsaI | CCCAGC | 3 cut(s) | 107, 640, 2926 |
| GsuI | CTGGAG | 2 cut(s) | 2381, 2401 |
| HaeII | RGCGCY | 2 cut(s) | 1268, 2658 |
| HaeIII | GGCC | 6 cut(s) | 270, 1122, 1501, 1982, 1988, 2780 |
| HapII | CCGG | 5 cut(s) | 21, 267, 329, 343, 2254 |
| HhaI | GCGC | 5 cut(s) | 57, 372, 871, 1267, 2657 |
| Hin1II | CATG | 6 cut(s) | 1066, 1584, 1805, 2687, 2862, 2910 |
| Hin6I | GCGC | 5 cut(s) | 55, 370, 869, 1265, 2655 |
| HinP1I | GCGC | 5 cut(s) | 55, 370, 869, 1265, 2655 |
| HindIII | AAGCTT | 1 cut(s) | 1914 |
| HpaII | CCGG | 5 cut(s) | 21, 267, 329, 343, 2254 |
| HphI | GGTGA | 7 cut(s) | 109, 548, 680, 1181, 1409, 2387, 2624 |
| Hpy166II | GTNNAC | 8 cut(s) | 382, 1025, 1353, 1639, 1811, 1972, 2449, 2513 |
| Hpy8I | GTNNAC | 8 cut(s) | 382, 1025, 1353, 1639, 1811, 1972, 2449, 2513 |
| HpyCH4III | ACNGT | 8 cut(s) | 506, 1378, 1563, 1858, 2426, 2481, 2522, 2954 |
| HpyCH4IV | ACGT | 2 cut(s) | 1907, 2902 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 977, 1273, 2291, 2764, 2827, 2916, 2964 |
| HpyF3I | CTNAG | 6 cut(s) | 570, 889, 1422, 1615, 2106, 2126 |
| HpySE526I | ACGT | 2 cut(s) | 1907, 2902 |
| Hsp92II | CATG | 6 cut(s) | 1066, 1584, 1805, 2687, 2862, 2910 |
| HspAI | GCGC | 5 cut(s) | 55, 370, 869, 1265, 2655 |
| KflI | GGGWCCC | 1 cut(s) | 397 |
| Kpn2I | TCCGGA | 1 cut(s) | 2253 |
| LmnI | GCTCC | 7 cut(s) | 15, 23, 112, 237, 758, 1313, 2168 |
| Lsp1109I | GCAGC | 6 cut(s) | 64, 201, 324, 980, 1613, 2931 |
| LweI | GCATC | 8 cut(s) | 14, 66, 341, 595, 967, 1662, 2192, 2745 |
| MabI | ACCWGGT | 1 cut(s) | 1165 |
| MaeI | CTAG | 6 cut(s) | 71, 960, 992, 1217, 1226, 1713 |
| MaeII | ACGT | 2 cut(s) | 1907, 2902 |
| MaeIII | GTNAC | 4 cut(s) | 536, 1334, 2375, 2694 |
| MfeI | CAATTG | 2 cut(s) | 935, 1836 |
| MflI | RGATCY | 3 cut(s) | 885, 1573, 2131 |
| MhlI | GDGCHC | 4 cut(s) | 20, 384, 2728, 2782 |
| MlyI | GAGTC | 5 cut(s) | 551, 886, 2065, 2588, 2624 |
| MmeI | TCCRAC | 3 cut(s) | 1767, 1959, 2190 |
| Mph1103I | ATGCAT | 1 cut(s) | 610 |
| MroI | TCCGGA | 1 cut(s) | 2253 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1413 |
| MseI | TTAA | 8 cut(s) | 1080, 1161, 1442, 1704, 2021, 2114, 2178, 2835 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1806 |
| MspA1I | CMGCKG | 5 cut(s) | 214, 971, 2629, 2791, 2922 |
| MspI | CCGG | 5 cut(s) | 21, 267, 329, 343, 2254 |
| MspR9I | CCNGG | 9 cut(s) | 267, 343, 344, 394, 1076, 1167, 1648, 1748, 2993 |
| MunI | CAATTG | 2 cut(s) | 935, 1836 |
| Mva1269I | GAATGC | 5 cut(s) | 565, 920, 1252, 1483, 1513 |
| MvaI | CCWGG | 6 cut(s) | 394, 1076, 1167, 1648, 1748, 2993 |
| MvnI | CGCG | 1 cut(s) | 324 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 977, 1273, 2291, 2764, 2827, 2916, 2964 |
| NciI | CCSGG | 3 cut(s) | 267, 343, 344 |
| NlaIII | CATG | 6 cut(s) | 1066, 1584, 1805, 2687, 2862, 2910 |
| NlaIV | GGNNCC | 6 cut(s) | 271, 398, 399, 1981, 2780, 2781 |
| NmuCI | GTSAC | 3 cut(s) | 536, 1334, 2375 |
| NsbI | TGCGCA | 1 cut(s) | 870 |
| NsiI | ATGCAT | 1 cut(s) | 610 |
| NspV | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| PaeR7I | CTCGAG | 1 cut(s) | 881 |
| PctI | GAATGC | 5 cut(s) | 565, 920, 1252, 1483, 1513 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1413 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2016, 2751 |
| PfoI | TCCNGGA | 1 cut(s) | 2991 |
| Ple19I | CGATCG | 1 cut(s) | 1720 |
| PleI | GAGTC | 5 cut(s) | 550, 885, 2064, 2588, 2623 |
| PpsI | GAGTC | 5 cut(s) | 550, 885, 2064, 2588, 2623 |
| PpuMI | RGGWCCY | 1 cut(s) | 397 |
| PsiI | TTATAA | 1 cut(s) | 1659 |
| Psp124BI | GAGCTC | 1 cut(s) | 20 |
| Psp1406I | AACGTT | 1 cut(s) | 2902 |
| Psp5II | RGGWCCY | 1 cut(s) | 397 |
| Psp6I | CCWGG | 6 cut(s) | 392, 1074, 1165, 1646, 1746, 2991 |
| PspFI | CCCAGC | 3 cut(s) | 103, 636, 2922 |
| PspGI | CCWGG | 6 cut(s) | 392, 1074, 1165, 1646, 1746, 2991 |
| PspN4I | GGNNCC | 6 cut(s) | 271, 398, 399, 1981, 2780, 2781 |
| PspOMI | GGGCCC | 1 cut(s) | 2778 |
| PspPI | GGNCC | 8 cut(s) | 269, 397, 1120, 1489, 1499, 1980, 2778, 2779 |
| PspPPI | RGGWCCY | 1 cut(s) | 397 |
| PstI | CTGCAG | 1 cut(s) | 1522 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2424 |
| PsuI | RGATCY | 3 cut(s) | 885, 1573, 2131 |
| PvuI | CGATCG | 1 cut(s) | 1720 |
| PvuII | CAGCTG | 3 cut(s) | 971, 2791, 2922 |
| RsaI | GTAC | 2 cut(s) | 1097, 2423 |
| RsaNI | GTAC | 2 cut(s) | 1096, 2422 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1806 |
| SacI | GAGCTC | 1 cut(s) | 20 |
| SaqAI | TTAA | 8 cut(s) | 1080, 1161, 1442, 1704, 2021, 2114, 2178, 2835 |
| Sau96I | GGNCC | 8 cut(s) | 269, 397, 1120, 1489, 1499, 1980, 2778, 2779 |
| SchI | GAGTC | 5 cut(s) | 551, 886, 2065, 2588, 2624 |
| ScrFI | CCNGG | 9 cut(s) | 267, 343, 344, 394, 1076, 1167, 1648, 1748, 2993 |
| SduI | GDGCHC | 4 cut(s) | 20, 384, 2728, 2782 |
| SexAI | ACCWGGT | 1 cut(s) | 1165 |
| SfaNI | GCATC | 8 cut(s) | 14, 66, 341, 595, 967, 1662, 2192, 2745 |
| SfcI | CTRYAG | 1 cut(s) | 1518 |
| Sfr274I | CTCGAG | 1 cut(s) | 881 |
| SfuI | TTCGAA | 3 cut(s) | 1109, 2824, 2978 |
| SinI | GGWCC | 2 cut(s) | 397, 1489 |
| SlaI | CTCGAG | 1 cut(s) | 881 |
| SmaI | CCCGGG | 1 cut(s) | 344 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1806 |
| SmlI | CTYRAG | 3 cut(s) | 881, 1285, 2706 |
| SmoI | CTYRAG | 3 cut(s) | 881, 1285, 2706 |
| SspMI | CTAG | 6 cut(s) | 71, 960, 992, 1217, 1226, 1713 |
| SstI | GAGCTC | 1 cut(s) | 20 |
| StyD4I | CCNGG | 9 cut(s) | 265, 341, 342, 392, 1074, 1165, 1646, 1746, 2991 |
| StyI | CCWWGG | 2 cut(s) | 1983, 2136 |
| TaaI | ACNGT | 8 cut(s) | 506, 1378, 1563, 1858, 2426, 2481, 2522, 2954 |
| TaiI | ACGT | 2 cut(s) | 1910, 2905 |
| TaqII | GACCGA | 1 cut(s) | 2665 |
| TatI | WGTACW | 1 cut(s) | 1095 |
| TauI | GCSGC | 5 cut(s) | 134, 324, 362, 1886, 2970 |
| Tru1I | TTAA | 8 cut(s) | 1080, 1161, 1442, 1704, 2021, 2114, 2178, 2835 |
| Tru9I | TTAA | 8 cut(s) | 1080, 1161, 1442, 1704, 2021, 2114, 2178, 2835 |
| TscAI | CASTG | 5 cut(s) | 635, 763, 1345, 2152, 2527 |
| TseFI | GTSAC | 3 cut(s) | 536, 1334, 2375 |
| TseI | GCWGC | 6 cut(s) | 52, 214, 337, 968, 1601, 2919 |
| Tsp45I | GTSAC | 3 cut(s) | 536, 1334, 2375 |
| TspMI | CCCGGG | 1 cut(s) | 342 |
| TspRI | CASTG | 5 cut(s) | 635, 763, 1345, 2152, 2527 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2016, 2751 |
| VneI | GTGCAC | 1 cut(s) | 380 |
| VpaK11BI | GGWCC | 2 cut(s) | 397, 1489 |
| XapI | RAATTY | 8 cut(s) | 515, 1003, 1048, 1111, 1555, 1846, 2002, 2346 |
| XbaI | TCTAGA | 1 cut(s) | 1216 |
| XhoI | CTCGAG | 1 cut(s) | 881 |
| XmaI | CCCGGG | 1 cut(s) | 342 |
| XmiI | GTMKAC | 2 cut(s) | 1352, 1971 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1413 |
| XspI | CTAG | 6 cut(s) | 71, 960, 992, 1217, 1226, 1713 |
| Zsp2I | ATGCAT | 1 cut(s) | 610 |