Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005716

Physical Location & Seq

Genomic Coordinates Reverse (-)

63894122 .. 63898259

Gene Structure 4138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG425500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2976 bp

ATGGCGGCCGATTCAAATTCCGGCGATCCAATCTCCGACTACGGCCGAACCCACCGGATCGTGCTCCTAATCGACCTAAACCCACTCCTCCATCTCCAAGACCCAACCCCATTTCTCACCTCTCTCCTCTCCTCCATCAAAACCCTAACCTCCTTCCCTCCTCTCTCTTCCTCTCTCTTCGCCTTCAGACCCTTCTTCTCGTCTCTCTCTCCTCTCCTCTCCTCCTCCAAGCTCCCCGCTTCCTCTCTCTCCCTCTCCTTCAACCCCCCGGACTCTACTTTCCTCTCGCTCTCTCAAACCCTAGCCTCTCTCTCCTTTGACCGGAACCCTAGCTTGACCGGGTCCGACTCGCCGCGGGCTTCGTTCGTCGCGGCGGCGATGAGGCAACTCGTCCACGACTACGCTTGGGACGCGCCGATCTGCGATCCGGCGACCGGTACGTTTTCGAATTGTGGTGCTTTGAGGTCTAATTTGGTTGTTCTGTTTTCGCCGGTGTGTGGGTCTTTGAAATTTGTGAGTGAGTTCTTGAATGTGGGAGTGGGTGATGAGTGTTTGGGAGATTTGAATGCGTTTTGTGAGAGATTTCGAGGGGTTTTCGAGAATGTGGATGAGGCATTTGGTAGTAGAGATATTCAATTGAGTTGGGTTGATGTGAGGTATGAATTGGAGTGTGGTGAGAATGAGGTTGGGTTGAAATGTGGTTTTTTCGAGAGGGGGATTAGGAGTTTAGGGTGGGGGATTAGCTCCTCTGATTCGATTGTGCTTGGTTCGGCTCTTGTTCCGTTTGGTTTGATTTATCCAGAGATTGGGGTTTCGTCGAAGATTTTTGGGGATCATAGTAAGAAGGTTAGAGCACAATTGAATCTTGGAATATCAGATGTAATGGGGATGCCTTTGGAGTGCAAGTTTTGTGATCTTGAGTTGGCTGAGTTGAAAACGTTGCCTAGAAGTAGAGCTGATGATGGCTTGTTTTCCGTGGAAAGCATGAAATCGCAAACAAGAGGTCATGAGGTGAAGAGGCTGTTCTGGGGAAGTGTTGGCAATGGAGTGTCGAAGATTCAGGTTAAGGCTTTGCAAAAGGACAGTGAGTTTGTGAAATTCAAGGGGCGGTTATCAGATCCGATTCATGTCTATGAAGTTTCAGGTAGAGATGGAAAAGAAGTTTGTGGTGGTTTTTTTGTAGATAAGGTTCTGGAAATGCTATCAGTGGAATTGGGCGAGTTTGTACCGAGGAAATTGGCGCCTGTTTGGCAGATTCTCTTGAGTTTTTTATCCAGGGATGGTTGCTGGGCATTGGTGTCCATTTCAAATGATAGTGGTGTATTACATACTGGAATCCTTAAGCCTTTTACAGTTTCTTCAGCTCTTCTGTTTATTTTGGATGAAGGATTTCACCCTTACAAAAAAGTGCATGGCATTGGTGCGGTGAATGTGGGTCAATCTCGTCCAAAGATGAACAATGAGATATGCAAACTCGACGTTGATTTGAACAACTTGTGCGGGTCGCAAACTGGATCTAATAAGCATTCTGCAGAGATTGATGGAAAGAAGAAAAGTAGCAAAAGAAATTCACATTCACTCCAAGACCTCACCTGGAGTGCTTTCTGTAAGGCAGCATTTGAATATTCAGACTTACATTTGGAAGAGGTTTACTTTGCCAGGCAACGCAACATCTCAAAAAAGTTGAAATTTCTGAAATGCTGGATGAAACAGATAAAAAAAGTGAATTATCCAACAATGGAGGAGTCCAAGACGCACCAGGAAAACCAAAAAGAGATGGGCAATAGGTTGGATGTGTTGTACCAAGAGAGCGAACAGCCGATGTCATCATCGGGTTCAGCTGGAGAAAATTCTTTGACTGTGGCTTTTGGAGTACAGGATGAAGCTGCTCAGGAATATAGATTAGAAAACTCGGAAGCCTTTTTCAGTAATTTCTCCAATAAGATCCAACAAGGGCTTGAATCTGAAGCAGTAGACTTGGGGGCTTTCGCACATCGGCTTGTGAGTCAATCTATATCTTTGTTGAATCAAAAGCATAGCACAACAACCCCTTCAGAGAATCAAACTCTTGTAAAATCAGACAATATTGATGATTTGGTTGCTGCCGAGCTGTTAAAACTTTTACTCAGAGATCCCAAGGATATGGTTGCAGGGCACAAAAGCTATGATCCATCTTTTCAAGCATCTGATCCAGGATCTACTTCAGAAATAATAGTTCGAGAATATGAATTACAGATATTTTTCCGGATGGAGATTTTACAATCAGAAGTTGGAGCAAGTATCAAAGGTTCTGTGAAACAGAAGTTTGTGAAACATATTTGCATGCTTTTGGAGACCATTCGTGTTCGGTGTCATCTGGAGGGAGGCTTCTTTGGTGACTGGACCCTAGAAAATTATGCTGGAAAGATTATAAAAAACAGGTACTGTCAGACTCTTGAAGATGTGGTTCATAAAATCTACACAAAAATGGATCTGTTGCTGTTTGATGATGAGGAAGAACTCTCTAATAATCTATTCAACAGTGAGGATAGCAATCAATCCTACAGAGAAAAACCAGGGAAAGATGAGGTGGGTGAAAATAGTAGAATCAAGGAATTAGTATCAGCAGAAGATGAATCCCCTGATCTGGGAAAACATTACAATGGAAGACCAAGTGCTCAAGTGGTTAAACAAGAGGAGCATGCTCGCAAGTTGATTGAAGCTCAAGAGAGTAGAGAGAGGGCTAGGAGATTTGCTTCTTTTACAAGTAGGGTAGCTGATTTGCAGCGAGTTTGGGCCCCAAAACAGCCTAAGGCGTTCAAGCCAAAATCAAATTCTCTTCCAAAGCCCGCTAAGAGGAAGGACCATACAGATTCCTATTATGAGAGAGTATTAGAAACCCCAATGACAGAAAATAAACGAATCCACATCAATGATGAAGATTACCAAGACTATGGAAGCCGTTCTGTTTCTAAATCATTGTTTCAGGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

991

Amino Acids

110.74

Weight (kDa)

5.94

Isoelectric Point (pI)

42.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52950 AT5G52950
fragaria_vesca	FvH4_7g30790
malus_domestica	MD01G1213200.v1.1 MD01G1213400.v1.1 MD07G1283200.v1.1
prunus_persica	Prupe.2G305400_v2.0.a1
pyrus_communis	pycom01g22430 pycom07g25730
rosa_chinensis	RchiOBHm_Chr1g0379731
rosa_laevigata	RLG00000026358 RLG00000026362
rosa_multiflora	Rmu_co8427163.1_g000001 Rmu_sc0013028.1_g000010 Rmu_sc0014259.1_g000002
rosa_roxburghii	Rroxscaffold_4G00279930
rosa_rugosa	Rorug01G0415100
rosa_samantha	Rh1AG438600 Rh1AG439100 Rh1BG395100 Rh1CG408200 Rh1CG408400 Rh1DG425500 Rh1DG426000 Rh6CG162800 Rh6DG154400 Rh7CG443300
rosa_wichuraiana	Rw1G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2411
AccB1I	GGYRCC	1 cut(s)	1240
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccI	GTMKAC	1 cut(s)	1974
AccII	CGCG	3 cut(s)	355, 371, 413
AccIII	TCCGGA	1 cut(s)	2244
AclI	AACGTT	1 cut(s)	938
AcoI	YGGCCR	2 cut(s)	6, 43
AcsI	RAATTY	7 cut(s)	16, 509, 1097, 1567, 1688, 1849, 2812
AcuI	CTGAAG	5 cut(s)	169, 1344, 1986, 2037, 2187
AcyI	GRCGYC	1 cut(s)	1241
AfaI	GTAC	5 cut(s)	439, 1227, 1802, 1875, 2423
AfiI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 2626, 2627, 2835
AflII	CTTAAG	1 cut(s)	1340
AgeI	ACCGGT	1 cut(s)	434
AjnI	CCWGG	6 cut(s)	1274, 1592, 1658, 1758, 2191, 2554
AjuI	GAANNNNNNNTTGG	2 cut(s)	2797, 2829
Alw21I	GWGCWC	3 cut(s)	66, 856, 2659
Alw26I	GTCTC	2 cut(s)	207, 2327
AlwNI	CAGNNNCTG	1 cut(s)	2424
Aor13HI	TCCGGA	1 cut(s)	2244
AoxI	GGCC	3 cut(s)	6, 43, 2775
ApaI	GGGCCC	1 cut(s)	2779
ApeKI	GCWGC	4 cut(s)	1613, 1886, 2102, 2764
ApoI	RAATTY	7 cut(s)	16, 509, 1097, 1567, 1688, 1849, 2812
ArsI	GACNNNNNNTTYG	4 cut(s)	988, 1020, 1073, 1105
AsiGI	ACCGGT	1 cut(s)	434
Asp700I	GAANNNNTTC	2 cut(s)	1389, 2941
AspLEI	GCGC	2 cut(s)	415, 1243
AspS9I	GGNCC	5 cut(s)	342, 2382, 2775, 2776, 2842
AsuC2I	CCSGG	2 cut(s)	269, 340
AsuHPI	GGTGA	9 cut(s)	109, 554, 686, 1024, 1385, 1438, 1582, 2387, 2585
AsuII	TTCGAA	1 cut(s)	446
AvaII	GGWCC	3 cut(s)	342, 2382, 2842
AxyI	CCTNAGG	1 cut(s)	2790
BaeGI	GKGCMC	2 cut(s)	2157, 2779
BanI	GGYRCC	1 cut(s)	1240
BanII	GRGCYC	1 cut(s)	2779
BbsI	GAAGAC	1 cut(s)	2653
Bbv12I	GWGCWC	3 cut(s)	66, 856, 2659
BbvI	GCAGC	4 cut(s)	1625, 1873, 2089, 2776
BccI	CCATC	9 cut(s)	99, 143, 956, 1145, 1274, 1535, 1771, 2179, 2242
BceAI	ACGGC	2 cut(s)	58, 2925
BciT130I	CCWGG	6 cut(s)	1276, 1594, 1660, 1760, 2193, 2556
BcnI	CCSGG	2 cut(s)	269, 340
BcoDI	GTCTC	2 cut(s)	207, 2327
BfaI	CTAG	6 cut(s)	302, 330, 945, 2387, 2724, 2974
BfmI	CTRYAG	2 cut(s)	1530, 2542
BfoI	RGCGCY	1 cut(s)	1244
BfrI	CTTAAG	1 cut(s)	1340
BglI	GCCNNNNNGGC	1 cut(s)	1249
BisI	GCNGC	8 cut(s)	6, 353, 372, 375, 1614, 1887, 2103, 2765
BlsI	GCNGC	8 cut(s)	7, 354, 373, 376, 1615, 1888, 2104, 2766
Bme1390I	CCNGG	8 cut(s)	269, 340, 1276, 1594, 1660, 1760, 2193, 2556
Bme18I	GGWCC	3 cut(s)	342, 2382, 2842
BmgT120I	GGNCC	5 cut(s)	342, 2382, 2775, 2776, 2842
BmiI	GGNNCC	6 cut(s)	326, 343, 1242, 2384, 2777, 2778
BmrFI	CCNGG	8 cut(s)	269, 340, 1276, 1594, 1660, 1760, 2193, 2556
BmsI	GCATC	2 cut(s)	879, 2192
BpiI	GAAGAC	1 cut(s)	2653
BpmI	CTGGAG	3 cut(s)	1615, 1863, 2378
Bpu10I	CCTNAGC	1 cut(s)	1890
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	4 cut(s)	938, 1282, 2643, 2688
BpuMI	CCSGG	2 cut(s)	269, 340
BsaBI	GATNNNNATC	1 cut(s)	2532
BsaHI	GRCGYC	1 cut(s)	1241
BsaI	GGTCTC	1 cut(s)	2327
BsaJI	CCNNGG	7 cut(s)	267, 353, 975, 1229, 1275, 2136, 2555
BsaWI	WCCGGW	4 cut(s)	54, 321, 434, 2244
BsaXI	ACNNNNNCTCC	4 cut(s)	890, 920, 1563, 1593
Bsc4I	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 2626, 2627, 2835
Bse118I	RCCGGY	2 cut(s)	434, 490
Bse1I	ACTGG	3 cut(s)	1336, 1516, 2384
Bse21I	CCTNAGG	1 cut(s)	2790
Bse3DI	GCAATG	1 cut(s)	1048
Bse8I	GATNNNNATC	1 cut(s)	2532
BseAI	TCCGGA	1 cut(s)	2244
BseBI	CCWGG	6 cut(s)	1276, 1594, 1660, 1760, 2193, 2556
BseDI	CCNNGG	7 cut(s)	267, 353, 975, 1229, 1275, 2136, 2555
BseGI	GGATG	9 cut(s)	613, 894, 1285, 1387, 1710, 1798, 1885, 2253, 2974
BseJI	GATNNNNATC	1 cut(s)	2532
BseLI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 2626, 2627, 2835
BseMI	GCAATG	1 cut(s)	1048
BseMII	CTCAG	3 cut(s)	918, 1904, 2140
BseNI	ACTGG	3 cut(s)	1336, 1516, 2384
BseSI	GKGCMC	2 cut(s)	2157, 2779
BseX3I	CGGCCG	2 cut(s)	6, 43
BseXI	GCAGC	4 cut(s)	1625, 1873, 2089, 2776
BseYI	CCCAGC	1 cut(s)	1287
Bsh1236I	CGCG	3 cut(s)	355, 371, 413
Bsh1285I	CGRYCG	3 cut(s)	9, 46, 435
BshFI	GGCC	3 cut(s)	8, 45, 2777
BshNI	GGYRCC	1 cut(s)	1240
BshTI	ACCGGT	1 cut(s)	434
BsiEI	CGRYCG	3 cut(s)	9, 46, 435
BsiHKAI	GWGCWC	3 cut(s)	66, 856, 2659
BsiSI	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2245
BslFI	GGGAC	1 cut(s)	422
BslI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 2626, 2627, 2835
BsmAI	GTCTC	2 cut(s)	207, 2327
BsmBI	CGTCTC	1 cut(s)	207
BsmFI	GGGAC	1 cut(s)	422
BsmI	GAATGC	2 cut(s)	571, 1525
BsnI	GGCC	3 cut(s)	8, 45, 2777
Bso31I	GGTCTC	1 cut(s)	2327
Bsp119I	TTCGAA	1 cut(s)	446
Bsp120I	GGGCCC	1 cut(s)	2775
Bsp1286I	GDGCHC	5 cut(s)	66, 856, 2157, 2659, 2779
Bsp13I	TCCGGA	1 cut(s)	2244
BspANI	GGCC	3 cut(s)	8, 45, 2777
BspCNI	CTCAG	3 cut(s)	919, 1903, 2139
BspEI	TCCGGA	1 cut(s)	2244
BspFNI	CGCG	3 cut(s)	355, 371, 413
BspHI	TCATGA	1 cut(s)	1006
BspLI	GGNNCC	6 cut(s)	326, 343, 1242, 2384, 2777, 2778
BspMAI	CTGCAG	1 cut(s)	1534
BspQI	GCTCTTC	1 cut(s)	1371
BspT104I	TTCGAA	1 cut(s)	446
BspT107I	GGYRCC	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	1340
BspTNI	GGTCTC	1 cut(s)	2327
BsrDI	GCAATG	1 cut(s)	1048
BsrFI	RCCGGY	2 cut(s)	434, 490
BsrI	ACTGG	3 cut(s)	1336, 1516, 2384
BssAI	RCCGGY	2 cut(s)	434, 490
BssECI	CCNNGG	7 cut(s)	267, 353, 975, 1229, 1275, 2136, 2555
BssNI	GRCGYC	1 cut(s)	1241
BssT1I	CCWWGG	1 cut(s)	2136
Bst2UI	CCWGG	6 cut(s)	1276, 1594, 1660, 1760, 2193, 2556
Bst4CI	ACNGT	5 cut(s)	1085, 1354, 1861, 2426, 2522
Bst6I	CTCTTC	6 cut(s)	172, 182, 1010, 1371, 1638, 2823
BstACI	GRCGYC	1 cut(s)	1241
BstAFI	CTTAAG	1 cut(s)	1340
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	5 cut(s)	357, 2324, 2682, 2686, 2829
BstDEI	CTNAG	5 cut(s)	927, 1890, 2126, 2790, 2832
BstDSI	CCRYGG	2 cut(s)	353, 975
BstF5I	GGATG	9 cut(s)	613, 894, 1285, 1387, 1710, 1798, 1885, 2253, 2974
BstFNI	CGCG	3 cut(s)	355, 371, 413
BstH2I	RGCGCY	1 cut(s)	1244
BstHHI	GCGC	2 cut(s)	415, 1243
BstMAI	GTCTC	2 cut(s)	207, 2327
BstMCI	CGRYCG	3 cut(s)	9, 46, 435
BstMWI	GCNNNNNNNGC	2 cut(s)	410, 1249
BstNI	CCWGG	6 cut(s)	1276, 1594, 1660, 1760, 2193, 2556
BstNSI	RCATGY	2 cut(s)	2326, 2684
BstSCI	CCNGG	8 cut(s)	267, 338, 1274, 1592, 1658, 1758, 2191, 2554
BstSFI	CTRYAG	2 cut(s)	1530, 2542
BstSLI	GKGCMC	2 cut(s)	2157, 2779
BstUI	CGCG	3 cut(s)	355, 371, 413
BstV1I	GCAGC	4 cut(s)	1625, 1873, 2089, 2776
BstV2I	GAAGAC	1 cut(s)	2653
BstX2I	RGATCY	6 cut(s)	1117, 1514, 1944, 2131, 2195, 2470
BstXI	CCANNNNNNTGG	2 cut(s)	2143, 2933
BstYI	RGATCY	6 cut(s)	1117, 1514, 1944, 2131, 2195, 2470
BstZI	CGGCCG	2 cut(s)	6, 43
Bsu36I	CCTNAGG	1 cut(s)	2790
BsuRI	GGCC	3 cut(s)	8, 45, 2777
BtgI	CCRYGG	2 cut(s)	353, 975
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	9 cut(s)	613, 894, 1285, 1387, 1710, 1798, 1885, 2253, 2974
BtsIMutI	CAGTG	3 cut(s)	1090, 1212, 2527
Cac8I	GCNNGC	5 cut(s)	357, 2324, 2682, 2686, 2829
CaiI	CAGNNNCTG	1 cut(s)	2424
CciI	TCATGA	1 cut(s)	1006
CfoI	GCGC	2 cut(s)	415, 1243
Cfr10I	RCCGGY	2 cut(s)	434, 490
Cfr13I	GGNCC	5 cut(s)	342, 2382, 2775, 2776, 2842
Cfr42I	CCGCGG	1 cut(s)	356
CseI	GACGC	2 cut(s)	419, 1762
Csp6I	GTAC	5 cut(s)	438, 1226, 1801, 1874, 2422
CspAI	ACCGGT	1 cut(s)	434
CviAII	CATG	6 cut(s)	985, 1007, 1127, 1412, 2323, 2681
CviQI	GTAC	5 cut(s)	438, 1226, 1801, 1874, 2422
DdeI	CTNAG	5 cut(s)	927, 1890, 2126, 2790, 2832
DinI	GGCGCC	1 cut(s)	1242
EaeI	YGGCCR	2 cut(s)	6, 43
EagI	CGGCCG	2 cut(s)	6, 43
Eam1104I	CTCTTC	6 cut(s)	172, 182, 1010, 1371, 1638, 2823
EarI	CTCTTC	6 cut(s)	172, 182, 1010, 1371, 1638, 2823
EclXI	CGGCCG	2 cut(s)	6, 43
Eco130I	CCWWGG	1 cut(s)	2136
Eco24I	GRGCYC	1 cut(s)	2779
Eco31I	GGTCTC	1 cut(s)	2327
Eco47I	GGWCC	3 cut(s)	342, 2382, 2842
Eco52I	CGGCCG	2 cut(s)	6, 43
Eco57I	CTGAAG	5 cut(s)	169, 1344, 1986, 2037, 2187
Eco81I	CCTNAGG	1 cut(s)	2790
EcoO109I	RGGNCCY	1 cut(s)	2776
EcoRII	CCWGG	6 cut(s)	1274, 1592, 1658, 1758, 2191, 2554
EcoT14I	CCWWGG	1 cut(s)	2136
EcoT38I	GRGCYC	1 cut(s)	2779
EgeI	GGCGCC	1 cut(s)	1242
EheI	GGCGCC	1 cut(s)	1242
ErhI	CCWWGG	1 cut(s)	2136
Esp3I	CGTCTC	1 cut(s)	207
FaeI	CATG	6 cut(s)	988, 1010, 1130, 1415, 2326, 2684
FaqI	GGGAC	1 cut(s)	422
FatI	CATG	6 cut(s)	984, 1006, 1126, 1411, 2322, 2680
FauI	CCCGC	4 cut(s)	244, 348, 1493, 2836
FblI	GTMKAC	1 cut(s)	1974
Fnu4HI	GCNGC	8 cut(s)	6, 353, 372, 375, 1614, 1887, 2103, 2765
FokI	GGATG	8 cut(s)	620, 901, 1292, 1394, 1717, 1805, 1892, 2260
FriOI	GRGCYC	1 cut(s)	2779
Fsp4HI	GCNGC	8 cut(s)	6, 353, 372, 375, 1614, 1887, 2103, 2765
FspBI	CTAG	6 cut(s)	302, 330, 945, 2387, 2724, 2974
GlaI	GCGC	2 cut(s)	414, 1242
GluI	GCNGC	8 cut(s)	6, 353, 372, 375, 1614, 1887, 2103, 2765
GsaI	CCCAGC	1 cut(s)	1291
GsuI	CTGGAG	3 cut(s)	1615, 1863, 2378
HaeII	RGCGCY	1 cut(s)	1244
HaeIII	GGCC	3 cut(s)	8, 45, 2777
HapII	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2245
HgaI	GACGC	2 cut(s)	419, 1762
HhaI	GCGC	2 cut(s)	415, 1243
Hin1I	GRCGYC	1 cut(s)	1241
Hin1II	CATG	6 cut(s)	988, 1010, 1130, 1415, 2326, 2684
Hin6I	GCGC	2 cut(s)	413, 1241
HinP1I	GCGC	2 cut(s)	413, 1241
HpaII	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2245
HphI	GGTGA	9 cut(s)	109, 554, 686, 1024, 1385, 1438, 1582, 2387, 2585
Hpy166II	GTNNAC	3 cut(s)	394, 1651, 1975
Hpy8I	GTNNAC	3 cut(s)	394, 1651, 1975
Hpy99I	CGWCG	3 cut(s)	371, 820, 1481
HpyAV	CCTTC	8 cut(s)	163, 193, 202, 268, 838, 1379, 2061, 2833
HpyCH4III	ACNGT	5 cut(s)	1085, 1354, 1861, 2426, 2522
HpyCH4IV	ACGT	3 cut(s)	440, 938, 1479
HpyCH4V	TGCA	8 cut(s)	903, 1075, 1411, 1470, 1532, 2150, 2322, 2764
HpyF10VI	GCNNNNNNNGC	2 cut(s)	410, 1249
HpyF3I	CTNAG	5 cut(s)	927, 1890, 2126, 2790, 2832
HpySE526I	ACGT	3 cut(s)	440, 938, 1479
Hsp92I	GRCGYC	1 cut(s)	1241
Hsp92II	CATG	6 cut(s)	988, 1010, 1130, 1415, 2326, 2684
HspAI	GCGC	2 cut(s)	413, 1241
KasI	GGCGCC	1 cut(s)	1240
Kpn2I	TCCGGA	1 cut(s)	2244
KspI	CCGCGG	1 cut(s)	356
LguI	GCTCTTC	1 cut(s)	1371
LmnI	GCTCC	5 cut(s)	69, 237, 749, 2273, 2677
Lsp1109I	GCAGC	4 cut(s)	1625, 1873, 2089, 2776
LweI	GCATC	2 cut(s)	879, 2192
MaeI	CTAG	6 cut(s)	302, 330, 945, 2387, 2724, 2974
MaeII	ACGT	3 cut(s)	440, 938, 1479
MaeIII	GTNAC	1 cut(s)	2375
MfeI	CAATTG	2 cut(s)	635, 857
MflI	RGATCY	6 cut(s)	1117, 1514, 1944, 2131, 2195, 2470
MhlI	GDGCHC	5 cut(s)	66, 856, 2157, 2659, 2779
Mly113I	GGCGCC	1 cut(s)	1241
MlyI	GAGTC	5 cut(s)	266, 341, 1754, 2014, 2425
MmeI	TCCRAC	6 cut(s)	60, 369, 1757, 1770, 1972, 2251
MroI	TCCGGA	1 cut(s)	2244
MroXI	GAANNNNTTC	2 cut(s)	1389, 2941
MseI	TTAA	4 cut(s)	1065, 1341, 2114, 2667
MslI	CAYNNNNRTG	4 cut(s)	1131, 2465, 2640, 2910
MspA1I	CMGCKG	2 cut(s)	355, 1841
MspCI	CTTAAG	1 cut(s)	1340
MspI	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2245
MspR9I	CCNGG	8 cut(s)	269, 340, 1276, 1594, 1660, 1760, 2193, 2556
MunI	CAATTG	2 cut(s)	635, 857
Mva1269I	GAATGC	2 cut(s)	571, 1525
MvaI	CCWGG	6 cut(s)	1276, 1594, 1660, 1760, 2193, 2556
MvnI	CGCG	3 cut(s)	355, 371, 413
MwoI	GCNNNNNNNGC	2 cut(s)	410, 1249
NarI	GGCGCC	1 cut(s)	1241
NciI	CCSGG	2 cut(s)	269, 340
NlaIII	CATG	6 cut(s)	988, 1010, 1130, 1415, 2326, 2684
NlaIV	GGNNCC	6 cut(s)	326, 343, 1242, 2384, 2777, 2778
NmeAIII	GCCGAG	1 cut(s)	2131
NmuCI	GTSAC	1 cut(s)	2375
NspI	RCATGY	2 cut(s)	2326, 2684
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	2 cut(s)	2326, 2684
PagI	TCATGA	1 cut(s)	1006
PciSI	GCTCTTC	1 cut(s)	1371
PctI	GAATGC	2 cut(s)	571, 1525
PdmI	GAANNNNTTC	2 cut(s)	1389, 2941
PflFI	GACNNNGTC	1 cut(s)	340
PflMI	CCANNNNNTGG	1 cut(s)	806
PfoI	TCCNGGA	1 cut(s)	2191
PinAI	ACCGGT	1 cut(s)	434
PkrI	GCNGC	8 cut(s)	7, 354, 373, 376, 1615, 1888, 2104, 2766
PleI	GAGTC	5 cut(s)	266, 341, 1753, 2013, 2425
PluTI	GGCGCC	1 cut(s)	1244
PpsI	GAGTC	5 cut(s)	266, 341, 1753, 2013, 2425
PsiI	TTATAA	1 cut(s)	2411
Psp1406I	AACGTT	1 cut(s)	938
Psp6I	CCWGG	6 cut(s)	1274, 1592, 1658, 1758, 2191, 2554
PspFI	CCCAGC	1 cut(s)	1287
PspGI	CCWGG	6 cut(s)	1274, 1592, 1658, 1758, 2191, 2554
PspN4I	GGNNCC	6 cut(s)	326, 343, 1242, 2384, 2777, 2778
PspOMI	GGGCCC	1 cut(s)	2775
PspPI	GGNCC	5 cut(s)	342, 2382, 2775, 2776, 2842
PsrI	GAACNNNNNNTAC	4 cut(s)	1173, 1205, 2272, 2304
PstI	CTGCAG	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	2424
PsuI	RGATCY	6 cut(s)	1117, 1514, 1944, 2131, 2195, 2470
PsyI	GACNNNGTC	1 cut(s)	340
PvuII	CAGCTG	1 cut(s)	1841
RsaI	GTAC	5 cut(s)	439, 1227, 1802, 1875, 2423
RsaNI	GTAC	5 cut(s)	438, 1226, 1801, 1874, 2422
RseI	CAYNNNNRTG	4 cut(s)	1131, 2465, 2640, 2910
SacII	CCGCGG	1 cut(s)	356
SapI	GCTCTTC	1 cut(s)	1371
SaqAI	TTAA	4 cut(s)	1065, 1341, 2114, 2667
SatI	GCNGC	8 cut(s)	6, 353, 372, 375, 1614, 1887, 2103, 2765
Sau96I	GGNCC	5 cut(s)	342, 2382, 2775, 2776, 2842
SchI	GAGTC	5 cut(s)	266, 341, 1754, 2014, 2425
ScrFI	CCNGG	8 cut(s)	269, 340, 1276, 1594, 1660, 1760, 2193, 2556
SduI	GDGCHC	5 cut(s)	66, 856, 2157, 2659, 2779
SfaNI	GCATC	2 cut(s)	879, 2192
SfcI	CTRYAG	2 cut(s)	1530, 2542
SfoI	GGCGCC	1 cut(s)	1242
Sfr303I	CCGCGG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	446
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	356
SinI	GGWCC	3 cut(s)	342, 2382, 2842
SmiMI	CAYNNNNRTG	4 cut(s)	1131, 2465, 2640, 2910
SmlI	CTYRAG	5 cut(s)	917, 1261, 1340, 2658, 2703
SmoI	CTYRAG	5 cut(s)	917, 1261, 1340, 2658, 2703
SphI	GCATGC	2 cut(s)	2326, 2684
SspDI	GGCGCC	1 cut(s)	1240
SspI	AATATT	2 cut(s)	1625, 2086
SspMI	CTAG	6 cut(s)	302, 330, 945, 2387, 2724, 2974
StyD4I	CCNGG	8 cut(s)	267, 338, 1274, 1592, 1658, 1758, 2191, 2554
StyI	CCWWGG	1 cut(s)	2136
TaaI	ACNGT	5 cut(s)	1085, 1354, 1861, 2426, 2522
TaiI	ACGT	3 cut(s)	443, 941, 1482
TatI	WGTACW	1 cut(s)	1873
TauI	GCSGC	4 cut(s)	8, 355, 374, 377
Tru1I	TTAA	4 cut(s)	1065, 1341, 2114, 2667
Tru9I	TTAA	4 cut(s)	1065, 1341, 2114, 2667
TscAI	CASTG	3 cut(s)	1090, 1212, 2527
TseFI	GTSAC	1 cut(s)	2375
TseI	GCWGC	4 cut(s)	1613, 1886, 2102, 2764
Tsp45I	GTSAC	1 cut(s)	2375
TspGWI	ACGGA	2 cut(s)	771, 964
TspRI	CASTG	3 cut(s)	1090, 1212, 2527
Tth111I	GACNNNGTC	1 cut(s)	340
Van91I	CCANNNNNTGG	1 cut(s)	806
Vha464I	CTTAAG	1 cut(s)	1340
VpaK11BI	GGWCC	3 cut(s)	342, 2382, 2842
XapI	RAATTY	7 cut(s)	16, 509, 1097, 1567, 1688, 1849, 2812
XceI	RCATGY	2 cut(s)	2326, 2684
XmiI	GTMKAC	1 cut(s)	1974
XmnI	GAANNNNTTC	2 cut(s)	1389, 2941
XspI	CTAG	6 cut(s)	302, 330, 945, 2387, 2724, 2974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.