Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005716

Physical Location & Seq

Genomic Coordinates Reverse (-)

34619373 .. 34623203

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1283200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGGCATCCGATCGGAGCTCCGGCGACCCAATCGCCGACTACGGCAAAACGCAGCGCATCGTCCTCCTCCTAGACCTCAACCCACTTCTCCACCTCCAAAACCCAGCTCCATTTCTCACCGCCCTCCTCTCGGCCGTCAAAACCCTCCTCTCCTTCCCACCTCTCTCCTCCTCTCTCTTCGCCTTCAGACCCTTCTTCTCCTCCCTCTCTCCGCTGCTTTCCTCCTCCAAGATCCCCACTTCCCTCTCCCTCTCTTTCCACCTCCCAGGCCCATCTTTCAACTCCCTCTCCCAAACCCTCAATTCCCTCCCCGCATTTCGCCGCGACCCGTTGTCGCCCCCCCGGGCTTCTAACCTCGCCGCCTCCTTGCGCCAGCTCGTGCACGATTACGCCTGGGACCCCGTGGTCTGCGATCCGGTAACGGGTATGTTTTCGAATTGTGATTCGACTGCTGTGAGGTCCAATTTGGTCGTTCTGTTTTCGCCCCTTTGTGTACCTGCCAACTGTTTGACAGAATTCCTGAATGTGGGTGTGGGTGACGAGTCTTTGGAAAATGTGAATGCGTTTTCCGAGAGATTTCGGGGTTTCTTTGAGAATGTGAATGATGCATTTATGAGTAGGGATATTCAATGTAGTTGGGTTGATGTCAGGTATGAATTAGAATGTGGTGAGGGTGAGGTTGGGAACGATGAGGATAAGACGAGATTTGAGTTTTTCGAGAGTGGGGTTAGGAGTTTGGGATGGGGATTTTGTTCAACTGATTCGATTGTTCTTGGTTCTGCTCTTGTTCCTTTTGGTTTGATTTATCCAGAGATTGGGATTTCATCCAAGTTTTTCGGTTGTAATGATAGTCATAAGAAAGTCAACGCGCAGTTGAGTCTCGAGATATTAGATGTAAGTGGGAAGCCTTTGGAATGCAAGTTTTGTGATCTTCAATTGGTTGATTTGAAGATGTTGCCTAGAAATGCAGCTGATGATACATTCTTTTCCCTAGAAATCATGAATTCACAAACAAAAGGTGGTAAACTGAAGGAATTGTTCTGGGGGAATTTTGGTAAAGGCGTGACAAAGTTTCAGGTTATGGCTTTGCAAAAGTATAATGAGTTTCTGAAATTCAGGGGGCACTTATCTGATCCTCTCCTTGTATGTGAAGGTTCGGAAAAACCTGGTAAAGATGGAAAAGAAAGTTTTGGCAATTATTATGCAGATAAGGTTCTAGAAATGCTAGCAGTGGACTTGGGTGAGAATGCAAAGAGAAAATCTACACCCAGTTGGCAGATTCTCTTGAGTTTCTTATATAGGAATGGTCATGGAGCATTAGTGTCTCTTTCAAATGACAGTGGTGTATCATATACCGCAATCCTTAAGCCTTTCACAGTTTCTTCGGCTCTTCTGTTTATTGTGGACGAAGGATTTCACCCTCAGACAAAAGTGCATGATATTGGTGGAGCAAAAGCAGACCGATTAAGTCCAAAGATGAAGAATGAGATTTGCAAACCGAATGCTGATTTGGACCAAACTGGGCCACCTAATAAGCATTCTGCAGGCAAGGATGGAAGGAAGCGGAATATCAAAAGAAATTCACATTTGCTACAAGATCTCACATGGAGTGCTTTCTGCAAGGCAGCATTTGAACACTCAGAGCTAAGTTTGGAAGAGGTTTACTTTGCCAGGGAATCGTATAACTCAAAAAAGATGAGATTTCTGAAATGCTGGATGAAACAGATTAAAAAGTCTAGCGAATGTGGCCTAATAGAGGAGAAAGAATCCCAGGCAGACAAGCTCCATAAAAAAGAGATGGACAATAGGTTGGATAACTTGCACCAAGAAAGTGAACAGCCAATTTCTTCATCTCCTTCCATTGGAGAAAATTCTTTGACTGTGGCTTCTGGTATACAAGATGAAGCTGCTTTGGAATTTAGATCAGAAACGTTGGAAGCTTTTTTCAGTAGTCTATCCAACAAGATCCAGCAAGGACTTGAATATGAAGCAGTAGACTTGGGGGCTTTGGCATATCGGCTTGTGAATTCATCCATATATTGGTTAAATACAAAGCGGGAAACAGAAGCCCTGTCAGAGAGTCAAACTCCTCTTGTAAATTCTGGTGCTACTGATGATTTGGTTGCTGCCGAGGTGTTAAAACTTCTACTCAGAGATCCCAAGGATATCAATGCAAGGCAGAAAAGCTGCAACCTCTCTGTTAAAGCATCTGATTCAGAATCTGAAGGACTTGCTTCGGGAAATATTGTTCGAGAATATGAATTGCAGATATTTTTCCGGATGGAGATACTGCAATCAGAGGTTGGTGCAAGTATTCCAGAGTCTATGAAACAGAAGTTTGTAAAACATATTTGCTCATTTTTGGAGAAAATTCGGTGTCATCTGGAGGGAGGCTTCTTTGGTGACTGGAGTGTAGATGATTATGTTGAAAAGATCATAAAAAACAGGTACTGTGAGACACTTGAGGACGTGGTTCACAAAATCTATATGAAAATGGATTTGTTGCTGTTTGCTGACGAGGAAGAACTCCCTAATAGTTTACTCAACAGCGAGGACAGCAATCGATCCTGTAGAGAAAAACCAAAGAGAGATGAAGTGGATGAAAATTACAAAATCTGGGACTCATTGTCAGCAGAAGGTGAGTCCCTTGGTCTGCTGAAAACTGATAGTGGAAGACCAACCGCTGAAGAGGTTAAACAAAACGACGACCATGCTCGCAAGTTAGTTGAAGCTCAAGAGAGTAGAGAGAGAGCTCGAAGATTCGCTTCTTTCACAAGAAGGATGCCCGATCTGCAGAGAGTTTGGGCCCCAAAACAGCTAAAACCATTGAAACCGAAGTCCAATCCGCTTCGAAAGCTGTTTAAAAGGAAGGATCATAGAGGGTCATGTGATGACAGGGTATGTGAAACCCCAATGACAGGAATCAAACGCTCATGCTCGCAAAGCAGCTGGGATGACGAAGAAGATTGCCGAGAATACAGTAGCCAGCCGTGTGGTTCTGTTTCGAAAGCATTGTTCCAGGATGATGACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1012

Amino Acids

113.43

Weight (kDa)

5.59

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52950 AT5G52950
fragaria_vesca	FvH4_7g30790
malus_domestica	MD01G1213200.v1.1 MD01G1213400.v1.1 MD07G1283200.v1.1
prunus_persica	Prupe.2G305400_v2.0.a1
pyrus_communis	pycom01g22430 pycom07g25730
rosa_chinensis	RchiOBHm_Chr1g0379731
rosa_laevigata	RLG00000026358 RLG00000026362
rosa_multiflora	Rmu_co8427163.1_g000001 Rmu_sc0013028.1_g000010 Rmu_sc0014259.1_g000002
rosa_roxburghii	Rroxscaffold_4G00279930
rosa_rugosa	Rorug01G0415100
rosa_samantha	Rh1AG438600 Rh1AG439100 Rh1BG395100 Rh1CG408200 Rh1CG408400 Rh1DG425500 Rh1DG426000 Rh6CG162800 Rh6DG154400 Rh7CG443300
rosa_wichuraiana	Rw1G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	404
Acc36I	ACCTGC	1 cut(s)	505
AccB7I	CCANNNNNTGG	2 cut(s)	815, 2040
AccI	GTMKAC	2 cut(s)	1894, 1995
AccII	CGCG	2 cut(s)	324, 869
AccIII	TCCGGA	1 cut(s)	2277
AclI	AACGTT	1 cut(s)	1931
AclWI	GGATC	7 cut(s)	226, 407, 1127, 1960, 2150, 2559, 2880
AcoI	YGGCCR	1 cut(s)	132
AcuI	CTGAAG	4 cut(s)	169, 1049, 2244, 2706
AfaI	GTAC	2 cut(s)	495, 2450
AfiI	CCNNNNNNNGG	8 cut(s)	130, 422, 526, 815, 1756, 1862, 2040, 2918
AflII	CTTAAG	1 cut(s)	1364
AhdI	GACNNNNNGTC	2 cut(s)	331, 2626
AjiI	CACGTC	1 cut(s)	2470
AjnI	CCWGG	6 cut(s)	265, 392, 1165, 1670, 1770, 3018
AjuI	GAANNNNNNNTTGG	2 cut(s)	1493, 1525
AloI	GAACNNNNNNTCC	2 cut(s)	2232, 2264
Alw21I	GWGCWC	3 cut(s)	20, 384, 2755
Alw26I	GTCTC	3 cut(s)	884, 1329, 2450
Alw44I	GTGCAC	1 cut(s)	380
AlwI	GGATC	7 cut(s)	226, 407, 1127, 1960, 2150, 2559, 2880
AlwNI	CAGNNNCTG	2 cut(s)	2222, 2451
Ama87I	CYCGRG	2 cut(s)	342, 881
Aor13HI	TCCGGA	1 cut(s)	2277
AoxI	GGCC	5 cut(s)	132, 268, 1523, 1747, 2805
ApaI	GGGCCC	1 cut(s)	2809
ApaLI	GTGCAC	1 cut(s)	380
ApeKI	GCWGC	8 cut(s)	52, 214, 968, 1625, 1907, 2126, 2187, 2946
Asp700I	GAANNNNTTC	1 cut(s)	1413
AspLEI	GCGC	3 cut(s)	57, 372, 871
AspS9I	GGNCC	7 cut(s)	269, 397, 459, 1513, 1523, 2805, 2806
AsuC2I	CCSGG	2 cut(s)	343, 344
AsuHPI	GGTGA	8 cut(s)	109, 548, 680, 686, 1253, 1409, 2414, 2651
AsuII	TTCGAA	3 cut(s)	434, 2851, 3005
AsuNHI	GCTAGC	1 cut(s)	1225
AvaI	CYCGRG	2 cut(s)	342, 881
AvaII	GGWCC	3 cut(s)	397, 459, 1513
BaeGI	GKGCMC	3 cut(s)	384, 1125, 2809
BanII	GRGCYC	3 cut(s)	20, 2755, 2809
BauI	CACGAG	1 cut(s)	377
BbsI	GAAGAC	1 cut(s)	2680
Bbv12I	GWGCWC	3 cut(s)	20, 384, 2755
BbvI	GCAGC	8 cut(s)	64, 201, 980, 1637, 1894, 2113, 2174, 2958
BccI	CCATC	6 cut(s)	280, 735, 1169, 1547, 1792, 2275
BceAI	ACGGC	3 cut(s)	58, 119, 2974
BcgI	CGANNNNNNTGC	2 cut(s)	2693, 2727
BciT130I	CCWGG	6 cut(s)	267, 394, 1167, 1672, 1772, 3020
BcnI	CCSGG	2 cut(s)	343, 344
BcoDI	GTCTC	3 cut(s)	884, 1329, 2450
BfaI	CTAG	6 cut(s)	71, 960, 992, 1217, 1226, 1737
BfmI	CTRYAG	3 cut(s)	1542, 2569, 2792
BfrI	CTTAAG	1 cut(s)	1364
BfuAI	ACCTGC	1 cut(s)	505
BglII	AGATCT	1 cut(s)	1597
Bme1390I	CCNGG	8 cut(s)	267, 343, 344, 394, 1167, 1672, 1772, 3020
Bme18I	GGWCC	3 cut(s)	397, 459, 1513
BmeRI	GACNNNNNGTC	2 cut(s)	331, 2626
BmeT110I	CYCGRG	2 cut(s)	342, 881
BmgBI	CACGTC	1 cut(s)	2470
BmgT120I	GGNCC	7 cut(s)	269, 397, 459, 1513, 1523, 2805, 2806
BmiI	GGNNCC	4 cut(s)	398, 399, 2807, 2808
BmrFI	CCNGG	8 cut(s)	267, 343, 344, 394, 1167, 1672, 1772, 3020
BmrI	ACTGGG	2 cut(s)	1263, 1530
BmsI	GCATC	5 cut(s)	14, 66, 595, 2216, 2772
BmtI	GCTAGC	1 cut(s)	1229
BmuI	ACTGGG	2 cut(s)	1263, 1530
BpiI	GAAGAC	1 cut(s)	2680
BplI	GAGNNNNNCTC	2 cut(s)	2071, 2103
BpmI	CTGGAG	2 cut(s)	2405, 2428
Bpu14I	TTCGAA	3 cut(s)	434, 2851, 3005
BpuEI	CTTGAG	3 cut(s)	1306, 2483, 2718
BpuMI	CCSGG	2 cut(s)	343, 344
Bsa29I	ATCGAT	1 cut(s)	2563
BsaWI	WCCGGW	2 cut(s)	415, 2277
BsaXI	ACNNNNNCTCC	4 cut(s)	272, 302, 1305, 1335
Bsc4I	CCNNNNNNNGG	8 cut(s)	130, 422, 526, 815, 1756, 1862, 2040, 2918
Bse1I	ACTGG	4 cut(s)	1269, 1525, 2411, 3031
BseAI	TCCGGA	1 cut(s)	2277
BseBI	CCWGG	6 cut(s)	267, 394, 1167, 1672, 1772, 3020
BseCI	ATCGAT	1 cut(s)	2563
BseLI	CCNNNNNNNGG	8 cut(s)	130, 422, 526, 815, 1756, 1862, 2040, 2918
BseMII	CTCAG	3 cut(s)	1436, 1653, 2164
BseNI	ACTGG	4 cut(s)	1269, 1525, 2411, 3031
BseRI	GAGGAG	9 cut(s)	56, 116, 137, 157, 160, 190, 214, 1772, 2079
BseSI	GKGCMC	3 cut(s)	384, 1125, 2809
BseX3I	CGGCCG	1 cut(s)	132
BseXI	GCAGC	8 cut(s)	64, 201, 980, 1637, 1894, 2113, 2174, 2958
BseYI	CCCAGC	2 cut(s)	103, 2949
Bsh1236I	CGCG	2 cut(s)	324, 869
Bsh1285I	CGRYCG	2 cut(s)	13, 135
BshFI	GGCC	5 cut(s)	134, 270, 1525, 1749, 2807
BshVI	ATCGAT	1 cut(s)	2563
BsiEI	CGRYCG	2 cut(s)	13, 135
BsiHKAI	GWGCWC	3 cut(s)	20, 384, 2755
BsiHKCI	CYCGRG	2 cut(s)	342, 881
BsiSI	CCGG	4 cut(s)	21, 343, 416, 2278
BslFI	GGGAC	3 cut(s)	410, 2629, 2633
BslI	CCNNNNNNNGG	8 cut(s)	130, 422, 526, 815, 1756, 1862, 2040, 2918
BsmAI	GTCTC	3 cut(s)	884, 1329, 2450
BsmFI	GGGAC	3 cut(s)	410, 2629, 2633
BsmI	GAATGC	5 cut(s)	565, 920, 1252, 1507, 1537
BsnI	GGCC	5 cut(s)	134, 270, 1525, 1749, 2807
BsoBI	CYCGRG	2 cut(s)	342, 881
Bsp119I	TTCGAA	3 cut(s)	434, 2851, 3005
Bsp120I	GGGCCC	1 cut(s)	2805
Bsp1286I	GDGCHC	5 cut(s)	20, 384, 1125, 2755, 2809
Bsp13I	TCCGGA	1 cut(s)	2277
BspANI	GGCC	5 cut(s)	134, 270, 1525, 1749, 2807
BspCNI	CTCAG	3 cut(s)	1435, 1652, 2163
BspDI	ATCGAT	1 cut(s)	2563
BspEI	TCCGGA	1 cut(s)	2277
BspFNI	CGCG	2 cut(s)	324, 869
BspHI	TCATGA	1 cut(s)	999
BspLI	GGNNCC	4 cut(s)	398, 399, 2807, 2808
BspMAI	CTGCAG	2 cut(s)	1546, 2796
BspMI	ACCTGC	1 cut(s)	505
BspOI	GCTAGC	1 cut(s)	1229
BspPI	GGATC	7 cut(s)	226, 407, 1127, 1960, 2150, 2559, 2880
BspQI	GCTCTTC	1 cut(s)	1395
BspT104I	TTCGAA	3 cut(s)	434, 2851, 3005
BspTI	CTTAAG	1 cut(s)	1364
BsrI	ACTGG	4 cut(s)	1269, 1525, 2411, 3031
BssNAI	GTATAC	1 cut(s)	1895
BssSI	CACGAG	1 cut(s)	377
BssT1I	CCWWGG	2 cut(s)	2160, 2647
Bst1107I	GTATAC	1 cut(s)	1895
Bst2BI	CACGAG	1 cut(s)	377
Bst2UI	CCWGG	6 cut(s)	267, 394, 1167, 1672, 1772, 3020
Bst4CI	ACNGT	6 cut(s)	506, 1340, 1378, 1882, 2453, 2981
Bst6I	CTCTTC	4 cut(s)	182, 1395, 1650, 2682
BstAFI	CTTAAG	1 cut(s)	1364
BstBI	TTCGAA	3 cut(s)	434, 2851, 3005
BstC8I	GCNNGC	6 cut(s)	374, 1227, 1546, 2716, 2939, 2987
BstDEI	CTNAG	4 cut(s)	1422, 1639, 1646, 2150
BstDSI	CCRYGG	1 cut(s)	402
BstENI	CCTNNNNNAGG	1 cut(s)	1754
BstFNI	CGCG	2 cut(s)	324, 869
BstHHI	GCGC	3 cut(s)	57, 372, 871
BstMAI	GTCTC	3 cut(s)	884, 1329, 2450
BstMCI	CGRYCG	2 cut(s)	13, 135
BstMWI	GCNNNNNNNGC	5 cut(s)	1746, 2556, 2791, 2854, 2943
BstNI	CCWGG	6 cut(s)	267, 394, 1167, 1672, 1772, 3020
BstSCI	CCNGG	8 cut(s)	265, 341, 342, 392, 1165, 1670, 1770, 3018
BstSFI	CTRYAG	3 cut(s)	1542, 2569, 2792
BstSLI	GKGCMC	3 cut(s)	384, 1125, 2809
BstUI	CGCG	2 cut(s)	324, 869
BstV1I	GCAGC	8 cut(s)	64, 201, 980, 1637, 1894, 2113, 2174, 2958
BstV2I	GAAGAC	1 cut(s)	2680
BstX2I	RGATCY	4 cut(s)	231, 1597, 1965, 2155
BstXI	CCANNNNNNTGG	1 cut(s)	2993
BstYI	RGATCY	4 cut(s)	231, 1597, 1965, 2155
BstZ17I	GTATAC	1 cut(s)	1895
BstZI	CGGCCG	1 cut(s)	132
Bsu15I	ATCGAT	1 cut(s)	2563
BsuRI	GGCC	5 cut(s)	134, 270, 1525, 1749, 2807
BsuTUI	ATCGAT	1 cut(s)	2563
BtgI	CCRYGG	1 cut(s)	402
BtrI	CACGTC	1 cut(s)	2470
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	2 cut(s)	1236, 1345
BveI	ACCTGC	1 cut(s)	505
Cac8I	GCNNGC	6 cut(s)	374, 1227, 1546, 2716, 2939, 2987
CaiI	CAGNNNCTG	2 cut(s)	2222, 2451
CciI	TCATGA	1 cut(s)	999
CfoI	GCGC	3 cut(s)	57, 372, 871
Cfr13I	GGNCC	7 cut(s)	269, 397, 459, 1513, 1523, 2805, 2806
Cfr9I	CCCGGG	1 cut(s)	342
ClaI	ATCGAT	1 cut(s)	2563
CsiI	ACCWGGT	1 cut(s)	1165
Csp6I	GTAC	2 cut(s)	494, 2449
CviAII	CATG	7 cut(s)	1000, 1310, 1436, 1605, 2711, 2886, 2934
CviQI	GTAC	2 cut(s)	494, 2449
DdeI	CTNAG	4 cut(s)	1422, 1639, 1646, 2150
DraI	TTTAAA	1 cut(s)	2863
DrdI	GACNNNNNNGTC	1 cut(s)	404
DriI	GACNNNNNGTC	2 cut(s)	331, 2626
DseDI	GACNNNNNNGTC	1 cut(s)	404
EaeI	YGGCCR	1 cut(s)	132
EagI	CGGCCG	1 cut(s)	132
Eam1104I	CTCTTC	4 cut(s)	182, 1395, 1650, 2682
Eam1105I	GACNNNNNGTC	2 cut(s)	331, 2626
EarI	CTCTTC	4 cut(s)	182, 1395, 1650, 2682
Ecl136II	GAGCTC	2 cut(s)	18, 2753
EclXI	CGGCCG	1 cut(s)	132
Eco130I	CCWWGG	2 cut(s)	2160, 2647
Eco24I	GRGCYC	3 cut(s)	20, 2755, 2809
Eco32I	GATATC	1 cut(s)	2167
Eco47I	GGWCC	3 cut(s)	397, 459, 1513
Eco52I	CGGCCG	1 cut(s)	132
Eco53kI	GAGCTC	2 cut(s)	18, 2753
Eco57I	CTGAAG	4 cut(s)	169, 1049, 2244, 2706
Eco88I	CYCGRG	2 cut(s)	342, 881
EcoICRI	GAGCTC	2 cut(s)	18, 2753
EcoNI	CCTNNNNNAGG	1 cut(s)	1754
EcoO109I	RGGNCCY	2 cut(s)	397, 2806
EcoRI	GAATTC	3 cut(s)	515, 1003, 2026
EcoRII	CCWGG	6 cut(s)	265, 392, 1165, 1670, 1770, 3018
EcoRV	GATATC	1 cut(s)	2167
EcoT14I	CCWWGG	2 cut(s)	2160, 2647
EcoT22I	ATGCAT	1 cut(s)	610
EcoT38I	GRGCYC	3 cut(s)	20, 2755, 2809
ErhI	CCWWGG	2 cut(s)	2160, 2647
FaeI	CATG	7 cut(s)	1003, 1313, 1439, 1608, 2714, 2889, 2937
FalI	AAGNNNNNCTT	2 cut(s)	2749, 2781
FaqI	GGGAC	3 cut(s)	410, 2629, 2633
FatI	CATG	7 cut(s)	999, 1309, 1435, 1604, 2710, 2885, 2933
FauI	CCCGC	2 cut(s)	319, 2049
FblI	GTMKAC	2 cut(s)	1894, 1995
FokI	GGATG	9 cut(s)	753, 811, 1565, 1729, 2017, 2293, 2612, 2794, 2966
FriOI	GRGCYC	3 cut(s)	20, 2755, 2809
FspBI	CTAG	6 cut(s)	71, 960, 992, 1217, 1226, 1737
GlaI	GCGC	3 cut(s)	56, 371, 870
GsaI	CCCAGC	2 cut(s)	107, 2953
GsuI	CTGGAG	2 cut(s)	2405, 2428
HaeIII	GGCC	5 cut(s)	134, 270, 1525, 1749, 2807
HapII	CCGG	4 cut(s)	21, 343, 416, 2278
HhaI	GCGC	3 cut(s)	57, 372, 871
Hin1II	CATG	7 cut(s)	1003, 1313, 1439, 1608, 2714, 2889, 2937
Hin6I	GCGC	3 cut(s)	55, 370, 869
HinP1I	GCGC	3 cut(s)	55, 370, 869
HincII	GTYRAC	1 cut(s)	865
HindII	GTYRAC	1 cut(s)	865
HindIII	AAGCTT	1 cut(s)	1938
HpaII	CCGG	4 cut(s)	21, 343, 416, 2278
HphI	GGTGA	8 cut(s)	109, 548, 680, 686, 1253, 1409, 2414, 2651
Hpy99I	CGWCG	1 cut(s)	2708
HpyCH4III	ACNGT	6 cut(s)	506, 1340, 1378, 1882, 2453, 2981
HpyCH4IV	ACGT	2 cut(s)	1931, 2469
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1746, 2556, 2791, 2854, 2943
HpyF3I	CTNAG	4 cut(s)	1422, 1639, 1646, 2150
HpySE526I	ACGT	2 cut(s)	1931, 2469
Hsp92II	CATG	7 cut(s)	1003, 1313, 1439, 1608, 2714, 2889, 2937
HspAI	GCGC	3 cut(s)	55, 370, 869
KflI	GGGWCCC	1 cut(s)	397
Kpn2I	TCCGGA	1 cut(s)	2277
LguI	GCTCTTC	1 cut(s)	1395
LmnI	GCTCC	6 cut(s)	15, 23, 112, 1313, 1448, 1788
Lsp1109I	GCAGC	8 cut(s)	64, 201, 980, 1637, 1894, 2113, 2174, 2958
LweI	GCATC	5 cut(s)	14, 66, 595, 2216, 2772
MabI	ACCWGGT	1 cut(s)	1165
MaeI	CTAG	6 cut(s)	71, 960, 992, 1217, 1226, 1737
MaeII	ACGT	2 cut(s)	1931, 2469
MaeIII	GTNAC	4 cut(s)	418, 536, 1063, 2402
MfeI	CAATTG	1 cut(s)	935
MflI	RGATCY	4 cut(s)	231, 1597, 1965, 2155
MhlI	GDGCHC	5 cut(s)	20, 384, 1125, 2755, 2809
MlyI	GAGTC	6 cut(s)	551, 886, 2089, 2330, 2615, 2651
MmeI	TCCRAC	3 cut(s)	1791, 1914, 1983
Mph1103I	ATGCAT	1 cut(s)	610
MroI	TCCGGA	1 cut(s)	2277
MroXI	GAANNNNTTC	1 cut(s)	1413
MseI	TTAA	8 cut(s)	1365, 1466, 1728, 2045, 2138, 2202, 2694, 2862
MspA1I	CMGCKG	4 cut(s)	214, 971, 2684, 2949
MspCI	CTTAAG	1 cut(s)	1364
MspI	CCGG	4 cut(s)	21, 343, 416, 2278
MspR9I	CCNGG	8 cut(s)	267, 343, 344, 394, 1167, 1672, 1772, 3020
MunI	CAATTG	1 cut(s)	935
Mva1269I	GAATGC	5 cut(s)	565, 920, 1252, 1507, 1537
MvaI	CCWGG	6 cut(s)	267, 394, 1167, 1672, 1772, 3020
MvnI	CGCG	2 cut(s)	324, 869
MwoI	GCNNNNNNNGC	5 cut(s)	1746, 2556, 2791, 2854, 2943
NciI	CCSGG	2 cut(s)	343, 344
NheI	GCTAGC	1 cut(s)	1225
NlaIII	CATG	7 cut(s)	1003, 1313, 1439, 1608, 2714, 2889, 2937
NlaIV	GGNNCC	4 cut(s)	398, 399, 2807, 2808
NmeAIII	GCCGAG	3 cut(s)	110, 2155, 2996
NmuCI	GTSAC	3 cut(s)	536, 1063, 2402
NsiI	ATGCAT	1 cut(s)	610
NspV	TTCGAA	3 cut(s)	434, 2851, 3005
PaeR7I	CTCGAG	1 cut(s)	881
PagI	TCATGA	1 cut(s)	999
PciSI	GCTCTTC	1 cut(s)	1395
PctI	GAATGC	5 cut(s)	565, 920, 1252, 1507, 1537
PdmI	GAANNNNTTC	1 cut(s)	1413
PfeI	GAWTC	9 cut(s)	443, 761, 1279, 1676, 1766, 2213, 2219, 2760, 2922
PflMI	CCANNNNNTGG	2 cut(s)	815, 2040
PfoI	TCCNGGA	1 cut(s)	3018
Ple19I	CGATCG	1 cut(s)	13
PleI	GAGTC	6 cut(s)	550, 885, 2088, 2329, 2615, 2650
PpsI	GAGTC	6 cut(s)	550, 885, 2088, 2329, 2615, 2650
PpuMI	RGGWCCY	1 cut(s)	397
Psp124BI	GAGCTC	2 cut(s)	20, 2755
Psp1406I	AACGTT	1 cut(s)	1931
Psp5II	RGGWCCY	1 cut(s)	397
Psp6I	CCWGG	6 cut(s)	265, 392, 1165, 1670, 1770, 3018
PspFI	CCCAGC	2 cut(s)	103, 2949
PspGI	CCWGG	6 cut(s)	265, 392, 1165, 1670, 1770, 3018
PspN4I	GGNNCC	4 cut(s)	398, 399, 2807, 2808
PspOMI	GGGCCC	1 cut(s)	2805
PspPI	GGNCC	7 cut(s)	269, 397, 459, 1513, 1523, 2805, 2806
PspPPI	RGGWCCY	1 cut(s)	397
PstI	CTGCAG	2 cut(s)	1546, 2796
PstNI	CAGNNNCTG	2 cut(s)	2222, 2451
PsuI	RGATCY	4 cut(s)	231, 1597, 1965, 2155
PvuI	CGATCG	1 cut(s)	13
PvuII	CAGCTG	2 cut(s)	971, 2949
RsaI	GTAC	2 cut(s)	495, 2450
RsaNI	GTAC	2 cut(s)	494, 2449
SacI	GAGCTC	2 cut(s)	20, 2755
SapI	GCTCTTC	1 cut(s)	1395
SaqAI	TTAA	8 cut(s)	1365, 1466, 1728, 2045, 2138, 2202, 2694, 2862
Sau96I	GGNCC	7 cut(s)	269, 397, 459, 1513, 1523, 2805, 2806
SchI	GAGTC	6 cut(s)	551, 886, 2089, 2330, 2615, 2651
ScrFI	CCNGG	8 cut(s)	267, 343, 344, 394, 1167, 1672, 1772, 3020
SduI	GDGCHC	5 cut(s)	20, 384, 1125, 2755, 2809
SexAI	ACCWGGT	1 cut(s)	1165
SfaNI	GCATC	5 cut(s)	14, 66, 595, 2216, 2772
SfcI	CTRYAG	3 cut(s)	1542, 2569, 2792
Sfr274I	CTCGAG	1 cut(s)	881
SfuI	TTCGAA	3 cut(s)	434, 2851, 3005
SinI	GGWCC	3 cut(s)	397, 459, 1513
SlaI	CTCGAG	1 cut(s)	881
SmaI	CCCGGG	1 cut(s)	344
SmlI	CTYRAG	5 cut(s)	881, 1285, 1364, 2462, 2733
SmoI	CTYRAG	5 cut(s)	881, 1285, 1364, 2462, 2733
SspI	AATATT	1 cut(s)	2245
SspMI	CTAG	6 cut(s)	71, 960, 992, 1217, 1226, 1737
SstI	GAGCTC	2 cut(s)	20, 2755
StyD4I	CCNGG	8 cut(s)	265, 341, 342, 392, 1165, 1670, 1770, 3018
StyI	CCWWGG	2 cut(s)	2160, 2647
TaaI	ACNGT	6 cut(s)	506, 1340, 1378, 1882, 2453, 2981
TaiI	ACGT	2 cut(s)	1934, 2472
TaqII	GACCGA	1 cut(s)	1476
TauI	GCSGC	2 cut(s)	324, 362
TfiI	GAWTC	9 cut(s)	443, 761, 1279, 1676, 1766, 2213, 2219, 2760, 2922
Tru1I	TTAA	8 cut(s)	1365, 1466, 1728, 2045, 2138, 2202, 2694, 2862
Tru9I	TTAA	8 cut(s)	1365, 1466, 1728, 2045, 2138, 2202, 2694, 2862
TscAI	CASTG	2 cut(s)	1236, 1345
TseFI	GTSAC	3 cut(s)	536, 1063, 2402
TseI	GCWGC	8 cut(s)	52, 214, 968, 1625, 1907, 2126, 2187, 2946
Tsp45I	GTSAC	3 cut(s)	536, 1063, 2402
TspMI	CCCGGG	1 cut(s)	342
TspRI	CASTG	2 cut(s)	1236, 1345
Van91I	CCANNNNNTGG	2 cut(s)	815, 2040
Vha464I	CTTAAG	1 cut(s)	1364
VneI	GTGCAC	1 cut(s)	380
VpaK11BI	GGWCC	3 cut(s)	397, 459, 1513
XagI	CCTNNNNNAGG	1 cut(s)	1754
XbaI	TCTAGA	1 cut(s)	1216
XhoI	CTCGAG	1 cut(s)	881
XmaI	CCCGGG	1 cut(s)	342
XmiI	GTMKAC	2 cut(s)	1894, 1995
XmnI	GAANNNNTTC	1 cut(s)	1413
XspI	CTAG	6 cut(s)	71, 960, 992, 1217, 1226, 1737
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.