Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0005716

Physical Location & Seq

Genomic Coordinates Forward (+)

2415072 .. 2419228

Gene Structure 4157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026362

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2985 bp

ATGGCGGCCGATTCAAATTCCGGCGATCCAATCTCCGACTACTGCCGAACCCAGCGGATCGTGCTCCTAATCGACCTAAACCCACTCCTCCATCTCCAAGACCCAACCCCATTTCTCACCTCTCTCCTCTCCTCCATCAAAACCCTAACCTCCTTCCCTCCTCTCTCTTCCTCTCTCTTCGCCTTCAGACCCTTCTTCTCGTCTCTCTCTCCTCTCCTCTCCTCCTCCAAGCTCCCCGCTTCCTCTCTCTCCCTCTCCTTCAACCCCCCGGCCTCCACTTTCCTCTCGCTCTCTCAAGCCCTAGCCTCTCTCTCGTTTGACCGGAACCCTAGCTTGACCGGATCCGGCTCGCCGCGGGCTTCGTTCGTCGCGGCGGCGATGCGGCAACTCGTCCACGACTACGCTTGGGACGCGCCGATCTGCGATCCGGCGACCGGTACGTTTTCGAATTGTGGTGCTTTGAGGTCTAATTTGGTTGTTCTGTTTTCGCCGGTGTGTGGGTCTTTGAAATTTGTGAGTGAGTTCTTGAATGTGGGAGTGGGTGATGAGTGTTTGGGAGATTTGAATGCGTTTTGCGAGAGATTTCGAGGGGTTTTCGAGAATGTGGATGAGGCATTTGGTAGTAGAGATATTCAATTGAGTTGGGTTGATGTGAGGTATGAATTGGAGTGTGGTGAGAATGAGGCTGGATTGAAATGTGGTTTTTTCGAGAGGGGGATTAGGAGTTTAGGGTGGGGGTTTTGCTCCTCTGATTCCATTGTGCTTGGTTCGGCTCTTGTTCCGTTTGGTTTGATTTATCCAGAGATTGGGGTTTCGTCGAAGATTTTTGGGGATCATAGTAAGAAGGTTAGAGGGCAATTGAGTCTTGAAATATCAGATGTAATGGGGATGCCTTTGGAGTGTAAGTTTTGTGATCTTGAGTTGGCTGAGTTGAAAATGTTGCCTAGAAGTAGAGCTGATGATGGTTTGTTTTCTGTGGAAAGCATGAAGTCGCAAACAAGAGGTCGTGAGCTGAAGAGGCTGTTCTGGGGAAGTGTTGGCAATGGAGTATCGAAGATTCAGGTTAAGGCTTTGCAAAAGGACAGTGAGTTTGCAAAAGTCAAGGGGCGGTTATCTGATCCGGTTCTTGTCTATGAAGTTTCGGGAAGAGATGGAAAAGAAGTTTGTGGTGGTTTTTTTGTAGATAAGGTTCTGGAAATGCTATCAGTGGAATTGGGCGAGTTTGTACCGAGGAAATTGGCGCCTGTTTGGCAGATTCTGTTGAGTTTTTTATACAGGGATGGTTGCTGGGCATTGGTGTCTATTTCAAATGATAGTGGTGTATTACATTCTGGAATCCTTAAGCCTTTTACAGTTTCTTCAGCTCTTCTGTTTAGTTTGGATGAAGGATTTCACCCTTACAAAAAAGGGCATGGCATTGGTGTGGTGAATGTGGATCAATCTCGTCCAAAGATGAACAATGAGGGATGCAAACCCGATGTTGATTTGAACAACTTGTGCGGGTCACAAACTGGATCTAATAAGCATTCTGCAGAAATTGATGGAAAGAAGAAAAGTAGCAAAAGATATTCACATTCACTCCAAGACCTCACCTGGAGTGCTTTCTGTAAGGCAGCATTTGAATATTCAGACTTACATTTGGAAGAGGTTTACTTTGCCAGGCAACGCAGCAGCTCAAAAAAGTTGAAATTTCTGAAATGCTGGATGAAACAGATAAAAAAAGTGAAGTATCCAATAACGGAGGAGTCCAAGGCGCACCAGGAAAACCAAAAGGAGATGGGCAATAGGTTGGATGTGTTGCACCAAGAGAGCGAACAGCCGATGTCATCATCTGGTTCAGCTGGAGAAAATTCTTTGACTGTGGCTTTTGGAGTACAGGATGAAGCTGCTCAGGAATATAGATTAGAAACCTCGGAAGCTTTTTTCAGTAATTTCTCCAATAAGATCCGACAAGGGCTTGAATCTGAAGCAGTAGACTTGGGGGCTTTCGCACATCGGCTTGTGAGTCAATCTATATCTTTGTTGAATCAAAAGCATAGCACAACAACCCCTTCAGAGAATCAAACTCATGTAAAATCTGACAATATTGATGATTTGGTTGCTGCTGAGCTGTTAAAACTTTTACTCAGAGATCCCAAGGATATGGTTGCAAGGCACAAAAGCTATGATCCATCTGTTCAAGCATCTGATCCAGGATCTGAAGGATTTAATTCAGAAATAATCGTTCGAGAATATGAATTACAGATATTTTTCCGCATGGAGATTTTACAATCAGAAGTTGGAGCAAGTATCAAAGATTCTGTGAAACAGAAGTTTGTGAAACATATTTGCATGCTTTTGGAGACCATTCGTGTTCGATGTCATCTGGAGGGAGGCTTCTTTGGTGACTGGACCCTAGAAAATTATGCTGGAAAGATTATAAAAATCAGGTACTGTCAGACTCTTGAAGATGTGGTTCATAAAATCTACACAAAAATGGATCTGTTGCTGTTTGATGATGAGGAAGAACTCTCTAATAATCTATTCAACAGCGAGGATAGCAATCAATCCTACAGAGAAAAACCAGGGAAAGATGAGGTGGGTGAAAATAGTAGAATCAAGGAATTAGTATCAGCAGAAGATGAATCCCCTGATCTGGGAAAACATTACAATGGAAGACCAGGTGCTCAAGTGGTTAAACAAGAGGAACATGCTCGCAAGTTGATTGAAGCTCAAGAGAGTAGAGAGAGGGCTAGGAGATTTGCTTCTTTTACAAGTAGGGTAGCTGATTTGCAGCGAGTTTGGGCCCCAAAACAGCCTAAGGCGTTCAAGCCAAAATCAAATTCTCTTCCAAAGCCGGCTAAGAGGAAGGACCATACAGATTCCTATTATGAGAGAGTATTAGAAACCCCAATGACAGAAAATAAACGAATCCACATTGATGATGAAGATTACCAAGACTATGGAAGCCGTTCTGTTTCTAAATCATTGTTTCAGGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

995

Amino Acids

111.05

Weight (kDa)

5.97

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52950 AT5G52950
fragaria_vesca	FvH4_7g30790
malus_domestica	MD01G1213200.v1.1 MD01G1213400.v1.1 MD07G1283200.v1.1
prunus_persica	Prupe.2G305400_v2.0.a1
pyrus_communis	pycom01g22430 pycom07g25730
rosa_chinensis	RchiOBHm_Chr1g0379731
rosa_laevigata	RLG00000026358 RLG00000026362
rosa_multiflora	Rmu_co8427163.1_g000001 Rmu_sc0013028.1_g000010 Rmu_sc0014259.1_g000002
rosa_roxburghii	Rroxscaffold_4G00279930
rosa_rugosa	Rorug01G0415100
rosa_samantha	Rh1AG438600 Rh1AG439100 Rh1BG395100 Rh1CG408200 Rh1CG408400 Rh1DG425500 Rh1DG426000 Rh6CG162800 Rh6DG154400 Rh7CG443300
rosa_wichuraiana	Rw1G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2420
AccB1I	GGYRCC	1 cut(s)	1240
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccI	GTMKAC	1 cut(s)	1974
AccII	CGCG	3 cut(s)	355, 371, 413
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	5 cut(s)	16, 509, 1688, 1849, 2821
AcuI	CTGAAG	6 cut(s)	169, 1034, 1344, 1986, 2037, 2220
AcyI	GRCGYC	1 cut(s)	1241
AfaI	GTAC	4 cut(s)	439, 1227, 1875, 2432
AfiI	CCNNNNNNNGG	5 cut(s)	434, 497, 806, 2635, 2636
AflII	CTTAAG	1 cut(s)	1340
AgeI	ACCGGT	1 cut(s)	434
AjnI	CCWGG	6 cut(s)	1592, 1658, 1758, 2191, 2563, 2659
AjuI	GAANNNNNNNTTGG	2 cut(s)	2806, 2838
Alw21I	GWGCWC	2 cut(s)	66, 2668
Alw26I	GTCTC	2 cut(s)	207, 2336
AlwNI	CAGNNNCTG	3 cut(s)	1258, 2198, 2433
AoxI	GGCC	3 cut(s)	6, 270, 2784
ApaI	GGGCCC	1 cut(s)	2788
ApeKI	GCWGC	6 cut(s)	1613, 1668, 1671, 1886, 2102, 2773
ApoI	RAATTY	5 cut(s)	16, 509, 1688, 1849, 2821
ArsI	GACNNNNNNTTYG	4 cut(s)	988, 1020, 1073, 1105
AsiGI	ACCGGT	1 cut(s)	434
Asp700I	GAANNNNTTC	2 cut(s)	1389, 2950
AspLEI	GCGC	3 cut(s)	415, 1243, 1756
AspS9I	GGNCC	4 cut(s)	2391, 2784, 2785, 2851
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	8 cut(s)	109, 554, 686, 1385, 1438, 1582, 2396, 2594
AsuII	TTCGAA	1 cut(s)	446
AvaII	GGWCC	2 cut(s)	2391, 2851
AxyI	CCTNAGG	1 cut(s)	2799
BaeGI	GKGCMC	1 cut(s)	2788
BamHI	GGATCC	1 cut(s)	341
BanI	GGYRCC	1 cut(s)	1240
BanII	GRGCYC	1 cut(s)	2788
BbsI	GAAGAC	1 cut(s)	2662
Bbv12I	GWGCWC	2 cut(s)	66, 2668
BbvI	GCAGC	6 cut(s)	1625, 1680, 1683, 1873, 2089, 2785
BccI	CCATC	8 cut(s)	99, 143, 956, 1145, 1274, 1535, 1771, 2179
BceAI	ACGGC	1 cut(s)	2934
BciT130I	CCWGG	6 cut(s)	1594, 1660, 1760, 2193, 2565, 2661
BciVI	GTATCC	1 cut(s)	1740
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	2 cut(s)	207, 2336
BfaI	CTAG	6 cut(s)	302, 330, 945, 2396, 2733, 2983
BfmI	CTRYAG	2 cut(s)	1530, 2551
BfoI	RGCGCY	1 cut(s)	1244
BfrI	CTTAAG	1 cut(s)	1340
BfuI	GTATCC	1 cut(s)	1740
BglI	GCCNNNNNGGC	1 cut(s)	1249
BlpI	GCTNAGC	1 cut(s)	2106
Bme1390I	CCNGG	7 cut(s)	269, 1594, 1660, 1760, 2193, 2565, 2661
Bme18I	GGWCC	2 cut(s)	2391, 2851
BmgT120I	GGNCC	4 cut(s)	2391, 2784, 2785, 2851
BmiI	GGNNCC	6 cut(s)	326, 343, 1242, 2393, 2786, 2787
BmrFI	CCNGG	7 cut(s)	269, 1594, 1660, 1760, 2193, 2565, 2661
BmsI	GCATC	4 cut(s)	369, 879, 1457, 2192
BpiI	GAAGAC	1 cut(s)	2662
BpmI	CTGGAG	3 cut(s)	1615, 1863, 2387
Bpu10I	CCTNAGC	1 cut(s)	1890
Bpu1102I	GCTNAGC	1 cut(s)	2106
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	4 cut(s)	279, 938, 2652, 2697
BpuMI	CCSGG	1 cut(s)	269
BsaBI	GATNNNNATC	1 cut(s)	2541
BsaHI	GRCGYC	1 cut(s)	1241
BsaI	GGTCTC	1 cut(s)	2336
BsaJI	CCNNGG	7 cut(s)	267, 353, 1229, 1749, 1911, 2136, 2564
BsaWI	WCCGGW	4 cut(s)	321, 338, 434, 1120
BsaXI	ACNNNNNCTCC	4 cut(s)	890, 920, 1563, 1593
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 497, 806, 2635, 2636
Bse118I	RCCGGY	3 cut(s)	434, 490, 2836
Bse1I	ACTGG	2 cut(s)	1516, 2393
Bse21I	CCTNAGG	1 cut(s)	2799
Bse3DI	GCAATG	1 cut(s)	1048
Bse8I	GATNNNNATC	1 cut(s)	2541
BseBI	CCWGG	6 cut(s)	1594, 1660, 1760, 2193, 2565, 2661
BseDI	CCNNGG	7 cut(s)	267, 353, 1229, 1749, 1911, 2136, 2564
BseGI	GGATG	9 cut(s)	613, 894, 1285, 1387, 1472, 1710, 1798, 1885, 2983
BseJI	GATNNNNATC	1 cut(s)	2541
BseLI	CCNNNNNNNGG	5 cut(s)	434, 497, 806, 2635, 2636
BseMI	GCAATG	1 cut(s)	1048
BseMII	CTCAG	4 cut(s)	918, 1904, 2097, 2140
BseNI	ACTGG	2 cut(s)	1516, 2393
BseSI	GKGCMC	1 cut(s)	2788
BseX3I	CGGCCG	1 cut(s)	6
BseXI	GCAGC	6 cut(s)	1625, 1680, 1683, 1873, 2089, 2785
BseYI	CCCAGC	2 cut(s)	51, 1287
Bsh1236I	CGCG	3 cut(s)	355, 371, 413
Bsh1285I	CGRYCG	2 cut(s)	9, 435
BshFI	GGCC	3 cut(s)	8, 272, 2786
BshNI	GGYRCC	1 cut(s)	1240
BshTI	ACCGGT	1 cut(s)	434
BsiEI	CGRYCG	2 cut(s)	9, 435
BsiHKAI	GWGCWC	2 cut(s)	66, 2668
BslFI	GGGAC	1 cut(s)	422
BslI	CCNNNNNNNGG	5 cut(s)	434, 497, 806, 2635, 2636
BsmAI	GTCTC	2 cut(s)	207, 2336
BsmBI	CGTCTC	1 cut(s)	207
BsmFI	GGGAC	1 cut(s)	422
BsmI	GAATGC	2 cut(s)	571, 1525
BsnI	GGCC	3 cut(s)	8, 272, 2786
Bso31I	GGTCTC	1 cut(s)	2336
Bsp119I	TTCGAA	1 cut(s)	446
Bsp120I	GGGCCC	1 cut(s)	2784
Bsp1286I	GDGCHC	3 cut(s)	66, 2668, 2788
Bsp1720I	GCTNAGC	1 cut(s)	2106
BspANI	GGCC	3 cut(s)	8, 272, 2786
BspCNI	CTCAG	4 cut(s)	919, 1903, 2098, 2139
BspFNI	CGCG	3 cut(s)	355, 371, 413
BspLI	GGNNCC	6 cut(s)	326, 343, 1242, 2393, 2786, 2787
BspMAI	CTGCAG	1 cut(s)	1534
BspQI	GCTCTTC	1 cut(s)	1371
BspT104I	TTCGAA	1 cut(s)	446
BspT107I	GGYRCC	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	1340
BspTNI	GGTCTC	1 cut(s)	2336
BsrDI	GCAATG	1 cut(s)	1048
BsrFI	RCCGGY	3 cut(s)	434, 490, 2836
BsrI	ACTGG	2 cut(s)	1516, 2393
BssAI	RCCGGY	3 cut(s)	434, 490, 2836
BssECI	CCNNGG	7 cut(s)	267, 353, 1229, 1749, 1911, 2136, 2564
BssNI	GRCGYC	1 cut(s)	1241
BssT1I	CCWWGG	2 cut(s)	1749, 2136
Bst2UI	CCWGG	6 cut(s)	1594, 1660, 1760, 2193, 2565, 2661
Bst4CI	ACNGT	4 cut(s)	1085, 1354, 1861, 2435
Bst6I	CTCTTC	7 cut(s)	172, 182, 1010, 1141, 1371, 1638, 2832
BstACI	GRCGYC	1 cut(s)	1241
BstAFI	CTTAAG	1 cut(s)	1340
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	5 cut(s)	350, 357, 2333, 2695, 2838
BstDEI	CTNAG	6 cut(s)	927, 1890, 2106, 2126, 2799, 2841
BstDSI	CCRYGG	1 cut(s)	353
BstF5I	GGATG	9 cut(s)	613, 894, 1285, 1387, 1472, 1710, 1798, 1885, 2983
BstFNI	CGCG	3 cut(s)	355, 371, 413
BstH2I	RGCGCY	1 cut(s)	1244
BstHHI	GCGC	3 cut(s)	415, 1243, 1756
BstMAI	GTCTC	2 cut(s)	207, 2336
BstMCI	CGRYCG	2 cut(s)	9, 435
BstMWI	GCNNNNNNNGC	5 cut(s)	61, 410, 1018, 1249, 2538
BstNI	CCWGG	6 cut(s)	1594, 1660, 1760, 2193, 2565, 2661
BstNSI	RCATGY	2 cut(s)	2335, 2693
BstSCI	CCNGG	7 cut(s)	267, 1592, 1658, 1758, 2191, 2563, 2659
BstSFI	CTRYAG	2 cut(s)	1530, 2551
BstSLI	GKGCMC	1 cut(s)	2788
BstUI	CGCG	3 cut(s)	355, 371, 413
BstV1I	GCAGC	6 cut(s)	1625, 1680, 1683, 1873, 2089, 2785
BstV2I	GAAGAC	1 cut(s)	2662
BstX2I	RGATCY	6 cut(s)	341, 1514, 1944, 2131, 2195, 2479
BstXI	CCANNNNNNTGG	2 cut(s)	2143, 2942
BstYI	RGATCY	6 cut(s)	341, 1514, 1944, 2131, 2195, 2479
BstZI	CGGCCG	1 cut(s)	6
Bsu36I	CCTNAGG	1 cut(s)	2799
BsuI	GTATCC	1 cut(s)	1740
BsuRI	GGCC	3 cut(s)	8, 272, 2786
BtgI	CCRYGG	1 cut(s)	353
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	9 cut(s)	613, 894, 1285, 1387, 1472, 1710, 1798, 1885, 2983
BtsIMutI	CAGTG	2 cut(s)	1090, 1212
Cac8I	GCNNGC	5 cut(s)	350, 357, 2333, 2695, 2838
CaiI	CAGNNNCTG	3 cut(s)	1258, 2198, 2433
CfoI	GCGC	3 cut(s)	415, 1243, 1756
Cfr10I	RCCGGY	3 cut(s)	434, 490, 2836
Cfr13I	GGNCC	4 cut(s)	2391, 2784, 2785, 2851
Cfr42I	CCGCGG	1 cut(s)	356
CseI	GACGC	1 cut(s)	419
CsiI	ACCWGGT	1 cut(s)	2659
Csp6I	GTAC	4 cut(s)	438, 1226, 1874, 2431
CspAI	ACCGGT	1 cut(s)	434
CviAII	CATG	6 cut(s)	985, 1412, 2069, 2257, 2332, 2690
CviQI	GTAC	4 cut(s)	438, 1226, 1874, 2431
DdeI	CTNAG	6 cut(s)	927, 1890, 2106, 2126, 2799, 2841
DinI	GGCGCC	1 cut(s)	1242
EaeI	YGGCCR	1 cut(s)	6
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	7 cut(s)	172, 182, 1010, 1141, 1371, 1638, 2832
EarI	CTCTTC	7 cut(s)	172, 182, 1010, 1141, 1371, 1638, 2832
EclXI	CGGCCG	1 cut(s)	6
Eco130I	CCWWGG	2 cut(s)	1749, 2136
Eco24I	GRGCYC	1 cut(s)	2788
Eco31I	GGTCTC	1 cut(s)	2336
Eco47I	GGWCC	2 cut(s)	2391, 2851
Eco52I	CGGCCG	1 cut(s)	6
Eco57I	CTGAAG	6 cut(s)	169, 1034, 1344, 1986, 2037, 2220
Eco81I	CCTNAGG	1 cut(s)	2799
EcoO109I	RGGNCCY	1 cut(s)	2785
EcoRII	CCWGG	6 cut(s)	1592, 1658, 1758, 2191, 2563, 2659
EcoT14I	CCWWGG	2 cut(s)	1749, 2136
EcoT38I	GRGCYC	1 cut(s)	2788
EgeI	GGCGCC	1 cut(s)	1242
EheI	GGCGCC	1 cut(s)	1242
ErhI	CCWWGG	2 cut(s)	1749, 2136
Esp3I	CGTCTC	1 cut(s)	207
FaeI	CATG	6 cut(s)	988, 1415, 2072, 2260, 2335, 2693
FaqI	GGGAC	1 cut(s)	422
FatI	CATG	6 cut(s)	984, 1411, 2068, 2256, 2331, 2689
FauI	CCCGC	3 cut(s)	244, 348, 1493
FblI	GTMKAC	1 cut(s)	1974
FokI	GGATG	8 cut(s)	620, 901, 1292, 1394, 1479, 1717, 1805, 1892
FriOI	GRGCYC	1 cut(s)	2788
FspBI	CTAG	6 cut(s)	302, 330, 945, 2396, 2733, 2983
GlaI	GCGC	3 cut(s)	414, 1242, 1755
GsaI	CCCAGC	2 cut(s)	55, 1291
GsuI	CTGGAG	3 cut(s)	1615, 1863, 2387
HaeII	RGCGCY	1 cut(s)	1244
HaeIII	GGCC	3 cut(s)	8, 272, 2786
HgaI	GACGC	1 cut(s)	419
HhaI	GCGC	3 cut(s)	415, 1243, 1756
Hin1I	GRCGYC	1 cut(s)	1241
Hin1II	CATG	6 cut(s)	988, 1415, 2072, 2260, 2335, 2693
Hin6I	GCGC	3 cut(s)	413, 1241, 1754
HinP1I	GCGC	3 cut(s)	413, 1241, 1754
HindIII	AAGCTT	1 cut(s)	1917
HphI	GGTGA	8 cut(s)	109, 554, 686, 1385, 1438, 1582, 2396, 2594
Hpy166II	GTNNAC	3 cut(s)	394, 1651, 1975
Hpy8I	GTNNAC	3 cut(s)	394, 1651, 1975
Hpy99I	CGWCG	2 cut(s)	371, 820
HpyAV	CCTTC	9 cut(s)	163, 193, 202, 268, 838, 1379, 2061, 2195, 2842
HpyCH4III	ACNGT	4 cut(s)	1085, 1354, 1861, 2435
HpyCH4IV	ACGT	1 cut(s)	440
HpyCH4V	TGCA	8 cut(s)	1075, 1094, 1470, 1532, 1801, 2150, 2331, 2773
HpyF10VI	GCNNNNNNNGC	5 cut(s)	61, 410, 1018, 1249, 2538
HpyF3I	CTNAG	6 cut(s)	927, 1890, 2106, 2126, 2799, 2841
HpySE526I	ACGT	1 cut(s)	440
Hsp92I	GRCGYC	1 cut(s)	1241
Hsp92II	CATG	6 cut(s)	988, 1415, 2072, 2260, 2335, 2693
HspAI	GCGC	3 cut(s)	413, 1241, 1754
KasI	GGCGCC	1 cut(s)	1240
KroI	GCCGGC	1 cut(s)	2836
KroNI	GCCGGC	1 cut(s)	2838
KspI	CCGCGG	1 cut(s)	356
LguI	GCTCTTC	1 cut(s)	1371
LmnI	GCTCC	4 cut(s)	69, 237, 749, 2282
Lsp1109I	GCAGC	6 cut(s)	1625, 1680, 1683, 1873, 2089, 2785
LweI	GCATC	4 cut(s)	369, 879, 1457, 2192
MabI	ACCWGGT	1 cut(s)	2659
MaeI	CTAG	6 cut(s)	302, 330, 945, 2396, 2733, 2983
MaeII	ACGT	1 cut(s)	440
MaeIII	GTNAC	2 cut(s)	1503, 2384
MfeI	CAATTG	2 cut(s)	635, 857
MflI	RGATCY	6 cut(s)	341, 1514, 1944, 2131, 2195, 2479
MhlI	GDGCHC	3 cut(s)	66, 2668, 2788
Mly113I	GGCGCC	1 cut(s)	1241
MlyI	GAGTC	4 cut(s)	871, 1754, 2014, 2434
MmeI	TCCRAC	4 cut(s)	60, 1770, 1972, 2260
MroNI	GCCGGC	1 cut(s)	2836
MroXI	GAANNNNTTC	2 cut(s)	1389, 2950
MseI	TTAA	5 cut(s)	1065, 1341, 2114, 2208, 2676
MslI	CAYNNNNRTG	4 cut(s)	1421, 2474, 2649, 2919
MspA1I	CMGCKG	3 cut(s)	55, 355, 1841
MspCI	CTTAAG	1 cut(s)	1340
MspR9I	CCNGG	7 cut(s)	269, 1594, 1660, 1760, 2193, 2565, 2661
MunI	CAATTG	2 cut(s)	635, 857
Mva1269I	GAATGC	2 cut(s)	571, 1525
MvaI	CCWGG	6 cut(s)	1594, 1660, 1760, 2193, 2565, 2661
MvnI	CGCG	3 cut(s)	355, 371, 413
MwoI	GCNNNNNNNGC	5 cut(s)	61, 410, 1018, 1249, 2538
NaeI	GCCGGC	1 cut(s)	2838
NarI	GGCGCC	1 cut(s)	1241
NciI	CCSGG	1 cut(s)	269
NgoMIV	GCCGGC	1 cut(s)	2836
NlaIII	CATG	6 cut(s)	988, 1415, 2072, 2260, 2335, 2693
NlaIV	GGNNCC	6 cut(s)	326, 343, 1242, 2393, 2786, 2787
NmuCI	GTSAC	2 cut(s)	1503, 2384
NspI	RCATGY	2 cut(s)	2335, 2693
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	1 cut(s)	2335
PciSI	GCTCTTC	1 cut(s)	1371
PctI	GAATGC	2 cut(s)	571, 1525
PdiI	GCCGGC	1 cut(s)	2838
PdmI	GAANNNNTTC	2 cut(s)	1389, 2950
PflMI	CCANNNNNTGG	1 cut(s)	806
PfoI	TCCNGGA	1 cut(s)	2191
PinAI	ACCGGT	1 cut(s)	434
PleI	GAGTC	4 cut(s)	870, 1753, 2013, 2434
PluTI	GGCGCC	1 cut(s)	1244
PpsI	GAGTC	4 cut(s)	870, 1753, 2013, 2434
PsiI	TTATAA	1 cut(s)	2420
Psp6I	CCWGG	6 cut(s)	1592, 1658, 1758, 2191, 2563, 2659
PspFI	CCCAGC	2 cut(s)	51, 1287
PspGI	CCWGG	6 cut(s)	1592, 1658, 1758, 2191, 2563, 2659
PspN4I	GGNNCC	6 cut(s)	326, 343, 1242, 2393, 2786, 2787
PspOMI	GGGCCC	1 cut(s)	2784
PspPI	GGNCC	4 cut(s)	2391, 2784, 2785, 2851
PsrI	GAACNNNNNNTAC	2 cut(s)	1173, 1205
PstI	CTGCAG	1 cut(s)	1534
PstNI	CAGNNNCTG	3 cut(s)	1258, 2198, 2433
PsuI	RGATCY	6 cut(s)	341, 1514, 1944, 2131, 2195, 2479
PvuII	CAGCTG	1 cut(s)	1841
RsaI	GTAC	4 cut(s)	439, 1227, 1875, 2432
RsaNI	GTAC	4 cut(s)	438, 1226, 1874, 2431
RseI	CAYNNNNRTG	4 cut(s)	1421, 2474, 2649, 2919
SacII	CCGCGG	1 cut(s)	356
SapI	GCTCTTC	1 cut(s)	1371
SaqAI	TTAA	5 cut(s)	1065, 1341, 2114, 2208, 2676
Sau96I	GGNCC	4 cut(s)	2391, 2784, 2785, 2851
SchI	GAGTC	4 cut(s)	871, 1754, 2014, 2434
ScrFI	CCNGG	7 cut(s)	269, 1594, 1660, 1760, 2193, 2565, 2661
SduI	GDGCHC	3 cut(s)	66, 2668, 2788
SexAI	ACCWGGT	1 cut(s)	2659
SfaNI	GCATC	4 cut(s)	369, 879, 1457, 2192
SfcI	CTRYAG	2 cut(s)	1530, 2551
SfoI	GGCGCC	1 cut(s)	1242
Sfr303I	CCGCGG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	446
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	356
SinI	GGWCC	2 cut(s)	2391, 2851
SmiMI	CAYNNNNRTG	4 cut(s)	1421, 2474, 2649, 2919
SmlI	CTYRAG	5 cut(s)	294, 917, 1340, 2667, 2712
SmoI	CTYRAG	5 cut(s)	294, 917, 1340, 2667, 2712
SphI	GCATGC	1 cut(s)	2335
SspDI	GGCGCC	1 cut(s)	1240
SspI	AATATT	2 cut(s)	1625, 2086
SspMI	CTAG	6 cut(s)	302, 330, 945, 2396, 2733, 2983
StyD4I	CCNGG	7 cut(s)	267, 1592, 1658, 1758, 2191, 2563, 2659
StyI	CCWWGG	2 cut(s)	1749, 2136
TaaI	ACNGT	4 cut(s)	1085, 1354, 1861, 2435
TaiI	ACGT	1 cut(s)	443
TaqI	TCGA	9 cut(s)	72, 446, 586, 597, 708, 818, 1052, 2227, 2356
TatI	WGTACW	1 cut(s)	1873
TauI	GCSGC	5 cut(s)	8, 355, 374, 377, 385
Tru1I	TTAA	5 cut(s)	1065, 1341, 2114, 2208, 2676
Tru9I	TTAA	5 cut(s)	1065, 1341, 2114, 2208, 2676
TscAI	CASTG	2 cut(s)	1090, 1212
TseFI	GTSAC	2 cut(s)	1503, 2384
TseI	GCWGC	6 cut(s)	1613, 1668, 1671, 1886, 2102, 2773
Tsp45I	GTSAC	2 cut(s)	1503, 2384
TspGWI	ACGGA	2 cut(s)	771, 1754
TspRI	CASTG	2 cut(s)	1090, 1212
Van91I	CCANNNNNTGG	1 cut(s)	806
Vha464I	CTTAAG	1 cut(s)	1340
VpaK11BI	GGWCC	2 cut(s)	2391, 2851
XapI	RAATTY	5 cut(s)	16, 509, 1688, 1849, 2821
XceI	RCATGY	2 cut(s)	2335, 2693
XmiI	GTMKAC	1 cut(s)	1974
XmnI	GAANNNNTTC	2 cut(s)	1389, 2950
XspI	CTAG	6 cut(s)	302, 330, 945, 2396, 2733, 2983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.