Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005716

Physical Location & Seq

Genomic Coordinates Reverse (-)

65793759 .. 65797902

Gene Structure 4144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G038200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGGCGGCCGATTCAAATTCCGGCGATCCAATCTCCGACTACGGCCGAACCCACCGGATCGTGCTCCTAATCGACCTAAACCCACTCCTCCATCTCCAAGACCCAACCCCATTTCTCACCTCTCTCCTCTCCTCCATCAAAACCCTAACCTCCTTCCCTCCTCTCTCTTCCTCTCTCTTCGCCTTCAGACCCTTCTTCTCGTCTCTCTCTCCTCTCCTCTCCTCCTCCAAGCTCCCCGCTTCCTCTCTGTCCCTCTCCTTCAACCCCCCGGACTCTACTTTCCTCTCGCTCTCTCAAACCCTAGCCTCTCTCTCCTTTGACCGGAACCCTAGCTTGACCGGATCCGACTCGCCGCGGGCTTTGTTCGTCTCGGCGGCGATGCGGCAACTCGTCCACGACTACGCTTGGGACGCGCCGATCTGCGATCCGGCGACCGGTACGTTTTCGAATTGTGGTGCTTTGAGGTCTAATTTGGTTGTTCTGTTTTCGCCGGTGTGTGGGTCTTTGAAATTTGTGAGTGAGTTCTTGAATGTGGGAGTGGGTGATGAGTATTTCGAGGGGTTTTTCGAGAATGTGGACGAGGCATTTGGTAGTAGAGATATTCAATTGAGTTGGGTTGATGTGAGGTATGAATTTGAGTGTGGTGAGAATGAGGTTGGGAGTTTAGGGTGGGGGTTTTGCTCCTCTGATTCGATTGTGCTTGGTTCGGCTCTTGTTCCGTTTGGTTTGATTATCCAGAGATTGGGGTTTCATGTTATGGGGATGCCTTTGGAATGCAAGTTTTGTGATCTTGAGTTGGCTGAGTTGAAAACGTTGCCTAGAAGTAGAGCTGATGATAGCTTGTTTTCCGTGGAAAGCATGAAATCGCAAACAAGAGGTCATGAGGTGAAGAGGCTGTTCTGGGGAAGTGTTGGCAATGGAGTGTCGAAGATTCAGGTTAAGGCTTTGCAAAAGGACAGTGAGTTTGTGAAATTCAAGGGGCGGTTATCAGATCCGATTCTCGTCTCTGAAGTTTCAGGTAGAGATGGAAAAGAAGTTTGTGGTGGTTTATTTGTAGATAAGGTTCTGGAAATGCTATCAGTGGAATTGGGCGAGTTTGTACCGAGGAAATTGGCGCCTGTTTGGCAGATTCTGTTGAGTTTTTTATCCAGGGATGGTTGCTGGGCATTGGTGTCCATTTCAAATGATAGTGGTGTATTACATACTGGAATCCTTAAGCCTTTTACAGTTTCTTCAGCTCTTCTGTTTATTTTGGATGAAGGATTTCAACCTCACAAAAAAGGAATGGCATTGATGAACAATGAGATATGCAAACCCGACGTTGATTTGAACAACTTGTGCGGGTCGCAAACTGGATCTAATAAGCATTCTGCAGAGATTGATGGAAAGAAGAAAAGTAGCAAAAGAAATTCACATTCACTCCAAGACCTCACCTGGAGTGCTTTCTGTAAGGCAGCATTTGAGTATTCAAACTTACATTTGGAAGAGGTTTACTTTGCCAGGCAACGCAGCATCTCAAAAAAGTTGAAATTTCTGAAATGCTGGATGAAACAGATAAAAAAAGTGAAGTATCCAATAATGGAGGAGTCCAAGACGCACCAGGAAAACCAAAAAGAGATGGGCAATAGGTTGGATGTGTTGCACCAAGAGAGCGAACAGCCGATGTCATCATCGGGTTCAGCTGGAGAAAATTCTTTGACTGTGGCTTTTGGAGTACAGGATGAAGCTGCTCAGGAATATAGATTAGAAACCTCGGAAGCCTTTTTCAGTAATTTCTCCAATAAGATCCGACAAGGCCTTGAATCTGAAGCAGTAGACTTGGGGGCTTTCGCACATCGGCTTGTGAGTCAATCTATATCTTTGTTGAATCAGAAGCATAGCACAACAAGCCCTTCAGAGAATCAAACTCTTGTAAAATCTGACAATATTGATGATTTGGTTGCTGCTGAGCTGTTAAAACTTTTACTCAGAGATCCCAAGGATATGGCTGCAAGTCACAAAAGCTATGATCCATCTTTTCAAGCATCTGATCCAGGATCTGAAGGATTTACTTCAGAAATAATAGTTCGAGAATATGAATTACAGATATTTTTCCGGATGGAGATTTTACAATCAGAAGTTGGAGCAAGTATCAAAGGTTCTGTGAAACAGAAGTTTGTGAAACATATTTGCTTGCTTTTGGAGACCATTCGTGTTCGGTGTCATCTGGAGGGAGGCTTCTTTGGTGACTGGACCCTAGAAAATTATGCTGGAAAGATTATAAAAAACAGGTACTGTCAGACTCTTGAAGATGTGGTTCATAAAATCTACACAAAAATGGATCTGTTGCTGTTTGATGATGAGGAAGAACTCTCTAATAATCTATTCAACAGTGAGGATAGCAATCAATCCTACAGAGAAAAACCAGGGAAAGATGAGGTAGGTGAAAATAGTAGAATCAAGGAATTAGTATCAGCAGAAGATGAATCCCCTGATCTGGGAAAACATTACAATGGAAGACCAAGTGCTCAAGTGGTTAAACAAGAGGAGCATGCTCGCAAGTTGATTGAAGCTCAAGAGAGTAGAGAGAGGGCTAGGAGATTTGCTTCTTTTACAAGTAGGGTAGCTGATTTGCAGCGAGTTTGGGCCCCAAAACAGCCCAAGGCGTTCAAGCCAAAATCAAATTCTCTTCCAAAGCCCGCTAAGAGGAAGGACCATACAGATTCCTATTATGAGAGAGTATTAGAAACCCCAATGACAGAAAATAAACGAATCCACATCAATGATGAAGATTACCAAGACTATGGAAGCCGTTCTGTTTCTAAATCATTGTTTCAGGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

941

Amino Acids

105.33

Weight (kDa)

5.76

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52950 AT5G52950
fragaria_vesca	FvH4_7g30790
malus_domestica	MD01G1213200.v1.1 MD01G1213400.v1.1 MD07G1283200.v1.1
prunus_persica	Prupe.2G305400_v2.0.a1
pyrus_communis	pycom01g22430 pycom07g25730
rosa_chinensis	RchiOBHm_Chr1g0379731
rosa_laevigata	RLG00000026358 RLG00000026362
rosa_multiflora	Rmu_co8427163.1_g000001 Rmu_sc0013028.1_g000010 Rmu_sc0014259.1_g000002
rosa_roxburghii	Rroxscaffold_4G00279930
rosa_rugosa	Rorug01G0415100
rosa_samantha	Rh1AG438600 Rh1AG439100 Rh1BG395100 Rh1CG408200 Rh1CG408400 Rh1DG425500 Rh1DG426000 Rh6CG162800 Rh6DG154400 Rh7CG443300
rosa_wichuraiana	Rw1G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2261
AccB1I	GGYRCC	1 cut(s)	1114
AccB7I	CCANNNNNTGG	1 cut(s)	742
AccI	GTMKAC	1 cut(s)	1815
AccII	CGCG	2 cut(s)	355, 413
AccIII	TCCGGA	1 cut(s)	2094
AciI	CCGC	9 cut(s)	5, 237, 353, 355, 374, 382, 982, 1341, 2679
AclI	AACGTT	1 cut(s)	812
AcoI	YGGCCR	2 cut(s)	6, 43
AcsI	RAATTY	8 cut(s)	16, 509, 632, 971, 1408, 1529, 1690, 2662
AcuI	CTGAAG	7 cut(s)	169, 1029, 1218, 1827, 1878, 2037, 2061
AcyI	GRCGYC	1 cut(s)	1115
AfaI	GTAC	4 cut(s)	439, 1101, 1716, 2273
AfiI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 742, 2476, 2477, 2685
AflII	CTTAAG	1 cut(s)	1214
AgeI	ACCGGT	1 cut(s)	434
AjnI	CCWGG	6 cut(s)	1148, 1433, 1499, 1599, 2032, 2404
AjuI	GAANNNNNNNTTGG	2 cut(s)	2647, 2679
Alw21I	GWGCWC	2 cut(s)	66, 2509
Alw26I	GTCTC	4 cut(s)	207, 373, 1009, 2177
AlwNI	CAGNNNCTG	3 cut(s)	1132, 2039, 2274
Aor13HI	TCCGGA	1 cut(s)	2094
AoxI	GGCC	4 cut(s)	6, 43, 1795, 2625
ApaI	GGGCCC	1 cut(s)	2629
ApeKI	GCWGC	6 cut(s)	1454, 1509, 1727, 1943, 1988, 2614
ApoI	RAATTY	8 cut(s)	16, 509, 632, 971, 1408, 1529, 1690, 2662
ArsI	GACNNNNNNTTYG	6 cut(s)	569, 601, 862, 894, 947, 979
AsiGI	ACCGGT	1 cut(s)	434
Asp700I	GAANNNNTTC	2 cut(s)	1263, 2791
AspLEI	GCGC	2 cut(s)	415, 1117
AspS9I	GGNCC	4 cut(s)	2232, 2625, 2626, 2692
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	7 cut(s)	109, 554, 656, 898, 1423, 2237, 2435
AsuII	TTCGAA	1 cut(s)	446
AvaII	GGWCC	2 cut(s)	2232, 2692
BaeGI	GKGCMC	1 cut(s)	2629
BamHI	GGATCC	1 cut(s)	341
BanI	GGYRCC	1 cut(s)	1114
BanII	GRGCYC	1 cut(s)	2629
BbsI	GAAGAC	1 cut(s)	2503
Bbv12I	GWGCWC	2 cut(s)	66, 2509
BbvI	GCAGC	6 cut(s)	1466, 1521, 1714, 1930, 1975, 2626
BccI	CCATC	8 cut(s)	99, 143, 1019, 1148, 1376, 1612, 2020, 2092
BceAI	ACGGC	2 cut(s)	58, 2775
BciT130I	CCWGG	6 cut(s)	1150, 1435, 1501, 1601, 2034, 2406
BciVI	GTATCC	1 cut(s)	1581
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	4 cut(s)	207, 373, 1009, 2177
BfaI	CTAG	6 cut(s)	302, 330, 819, 2237, 2574, 2824
BfmI	CTRYAG	2 cut(s)	1371, 2392
BfoI	RGCGCY	1 cut(s)	1118
BfrI	CTTAAG	1 cut(s)	1214
BfuI	GTATCC	1 cut(s)	1581
BglI	GCCNNNNNGGC	1 cut(s)	1123
BlpI	GCTNAGC	1 cut(s)	1947
Bme1390I	CCNGG	7 cut(s)	269, 1150, 1435, 1501, 1601, 2034, 2406
Bme18I	GGWCC	2 cut(s)	2232, 2692
BmgT120I	GGNCC	4 cut(s)	2232, 2625, 2626, 2692
BmiI	GGNNCC	6 cut(s)	326, 343, 1116, 2234, 2627, 2628
BmrFI	CCNGG	7 cut(s)	269, 1150, 1435, 1501, 1601, 2034, 2406
BmsI	GCATC	4 cut(s)	369, 753, 1521, 2033
BpiI	GAAGAC	1 cut(s)	2503
BpmI	CTGGAG	3 cut(s)	1456, 1704, 2228
Bpu10I	CCTNAGC	1 cut(s)	1731
Bpu1102I	GCTNAGC	1 cut(s)	1947
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	3 cut(s)	812, 2493, 2538
BpuMI	CCSGG	1 cut(s)	269
BsaBI	GATNNNNATC	1 cut(s)	2382
BsaHI	GRCGYC	1 cut(s)	1115
BsaI	GGTCTC	1 cut(s)	2177
BsaJI	CCNNGG	9 cut(s)	267, 353, 849, 1103, 1149, 1752, 1977, 2405, 2640
BsaWI	WCCGGW	5 cut(s)	54, 321, 338, 434, 2094
BsaXI	ACNNNNNCTCC	2 cut(s)	1404, 1434
Bsc4I	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 742, 2476, 2477, 2685
Bse118I	RCCGGY	2 cut(s)	434, 490
Bse1I	ACTGG	3 cut(s)	1210, 1357, 2234
Bse3DI	GCAATG	1 cut(s)	922
Bse8I	GATNNNNATC	1 cut(s)	2382
BseAI	TCCGGA	1 cut(s)	2094
BseBI	CCWGG	6 cut(s)	1150, 1435, 1501, 1601, 2034, 2406
BseDI	CCNNGG	9 cut(s)	267, 353, 849, 1103, 1149, 1752, 1977, 2405, 2640
BseGI	GGATG	8 cut(s)	768, 1159, 1261, 1551, 1639, 1726, 2103, 2824
BseJI	GATNNNNATC	1 cut(s)	2382
BseLI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 742, 2476, 2477, 2685
BseMI	GCAATG	1 cut(s)	922
BseMII	CTCAG	4 cut(s)	792, 1745, 1938, 1981
BseNI	ACTGG	3 cut(s)	1210, 1357, 2234
BseSI	GKGCMC	1 cut(s)	2629
BseX3I	CGGCCG	2 cut(s)	6, 43
BseXI	GCAGC	6 cut(s)	1466, 1521, 1714, 1930, 1975, 2626
BseYI	CCCAGC	1 cut(s)	1161
Bsh1236I	CGCG	2 cut(s)	355, 413
Bsh1285I	CGRYCG	3 cut(s)	9, 46, 435
BshFI	GGCC	4 cut(s)	8, 45, 1797, 2627
BshNI	GGYRCC	1 cut(s)	1114
BshTI	ACCGGT	1 cut(s)	434
BsiEI	CGRYCG	3 cut(s)	9, 46, 435
BsiHKAI	GWGCWC	2 cut(s)	66, 2509
BsiSI	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2095
BslFI	GGGAC	2 cut(s)	235, 422
BslI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 742, 2476, 2477, 2685
BsmAI	GTCTC	4 cut(s)	207, 373, 1009, 2177
BsmBI	CGTCTC	3 cut(s)	207, 373, 1009
BsmFI	GGGAC	2 cut(s)	235, 422
BsmI	GAATGC	2 cut(s)	779, 1366
BsnI	GGCC	4 cut(s)	8, 45, 1797, 2627
Bso31I	GGTCTC	1 cut(s)	2177
Bsp119I	TTCGAA	1 cut(s)	446
Bsp120I	GGGCCC	1 cut(s)	2625
Bsp1286I	GDGCHC	3 cut(s)	66, 2509, 2629
Bsp13I	TCCGGA	1 cut(s)	2094
Bsp1720I	GCTNAGC	1 cut(s)	1947
BspACI	CCGC	9 cut(s)	5, 237, 353, 355, 374, 382, 982, 1341, 2679
BspANI	GGCC	4 cut(s)	8, 45, 1797, 2627
BspCNI	CTCAG	4 cut(s)	793, 1744, 1939, 1980
BspEI	TCCGGA	1 cut(s)	2094
BspFNI	CGCG	2 cut(s)	355, 413
BspHI	TCATGA	1 cut(s)	880
BspLI	GGNNCC	6 cut(s)	326, 343, 1116, 2234, 2627, 2628
BspMAI	CTGCAG	1 cut(s)	1375
BspQI	GCTCTTC	1 cut(s)	1245
BspT104I	TTCGAA	1 cut(s)	446
BspT107I	GGYRCC	1 cut(s)	1114
BspTI	CTTAAG	1 cut(s)	1214
BspTNI	GGTCTC	1 cut(s)	2177
BsrDI	GCAATG	1 cut(s)	922
BsrFI	RCCGGY	2 cut(s)	434, 490
BsrI	ACTGG	3 cut(s)	1210, 1357, 2234
BssAI	RCCGGY	2 cut(s)	434, 490
BssECI	CCNNGG	9 cut(s)	267, 353, 849, 1103, 1149, 1752, 1977, 2405, 2640
BssNI	GRCGYC	1 cut(s)	1115
BssT1I	CCWWGG	2 cut(s)	1977, 2640
Bst2UI	CCWGG	6 cut(s)	1150, 1435, 1501, 1601, 2034, 2406
Bst4CI	ACNGT	5 cut(s)	959, 1228, 1702, 2276, 2372
Bst6I	CTCTTC	6 cut(s)	172, 182, 884, 1245, 1479, 2673
BstACI	GRCGYC	1 cut(s)	1115
BstAFI	CTTAAG	1 cut(s)	1214
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	5 cut(s)	357, 2174, 2532, 2536, 2679
BstDEI	CTNAG	5 cut(s)	801, 1731, 1947, 1967, 2682
BstDSI	CCRYGG	2 cut(s)	353, 849
BstF5I	GGATG	8 cut(s)	768, 1159, 1261, 1551, 1639, 1726, 2103, 2824
BstFNI	CGCG	2 cut(s)	355, 413
BstH2I	RGCGCY	1 cut(s)	1118
BstHHI	GCGC	2 cut(s)	415, 1117
BstMAI	GTCTC	4 cut(s)	207, 373, 1009, 2177
BstMCI	CGRYCG	3 cut(s)	9, 46, 435
BstMWI	GCNNNNNNNGC	3 cut(s)	410, 1123, 1887
BstNI	CCWGG	6 cut(s)	1150, 1435, 1501, 1601, 2034, 2406
BstNSI	RCATGY	1 cut(s)	2534
BstSCI	CCNGG	7 cut(s)	267, 1148, 1433, 1499, 1599, 2032, 2404
BstSFI	CTRYAG	2 cut(s)	1371, 2392
BstSLI	GKGCMC	1 cut(s)	2629
BstUI	CGCG	2 cut(s)	355, 413
BstV1I	GCAGC	6 cut(s)	1466, 1521, 1714, 1930, 1975, 2626
BstV2I	GAAGAC	1 cut(s)	2503
BstX2I	RGATCY	7 cut(s)	341, 991, 1355, 1785, 1972, 2036, 2320
BstXI	CCANNNNNNTGG	2 cut(s)	1984, 2783
BstYI	RGATCY	7 cut(s)	341, 991, 1355, 1785, 1972, 2036, 2320
BstZI	CGGCCG	2 cut(s)	6, 43
BsuI	GTATCC	1 cut(s)	1581
BsuRI	GGCC	4 cut(s)	8, 45, 1797, 2627
BtgI	CCRYGG	2 cut(s)	353, 849
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	8 cut(s)	768, 1159, 1261, 1551, 1639, 1726, 2103, 2824
BtsIMutI	CAGTG	3 cut(s)	964, 1086, 2377
Cac8I	GCNNGC	5 cut(s)	357, 2174, 2532, 2536, 2679
CaiI	CAGNNNCTG	3 cut(s)	1132, 2039, 2274
CciI	TCATGA	1 cut(s)	880
CfoI	GCGC	2 cut(s)	415, 1117
Cfr10I	RCCGGY	2 cut(s)	434, 490
Cfr13I	GGNCC	4 cut(s)	2232, 2625, 2626, 2692
Cfr42I	CCGCGG	1 cut(s)	356
CseI	GACGC	2 cut(s)	419, 1603
Csp6I	GTAC	4 cut(s)	438, 1100, 1715, 2272
CspAI	ACCGGT	1 cut(s)	434
CviAII	CATG	4 cut(s)	752, 859, 881, 2531
CviQI	GTAC	4 cut(s)	438, 1100, 1715, 2272
DdeI	CTNAG	5 cut(s)	801, 1731, 1947, 1967, 2682
DinI	GGCGCC	1 cut(s)	1116
EaeI	YGGCCR	2 cut(s)	6, 43
EagI	CGGCCG	2 cut(s)	6, 43
Eam1104I	CTCTTC	6 cut(s)	172, 182, 884, 1245, 1479, 2673
EarI	CTCTTC	6 cut(s)	172, 182, 884, 1245, 1479, 2673
EclXI	CGGCCG	2 cut(s)	6, 43
Eco130I	CCWWGG	2 cut(s)	1977, 2640
Eco147I	AGGCCT	1 cut(s)	1797
Eco24I	GRGCYC	1 cut(s)	2629
Eco31I	GGTCTC	1 cut(s)	2177
Eco47I	GGWCC	2 cut(s)	2232, 2692
Eco52I	CGGCCG	2 cut(s)	6, 43
Eco57I	CTGAAG	7 cut(s)	169, 1029, 1218, 1827, 1878, 2037, 2061
EcoO109I	RGGNCCY	1 cut(s)	2626
EcoRII	CCWGG	6 cut(s)	1148, 1433, 1499, 1599, 2032, 2404
EcoT14I	CCWWGG	2 cut(s)	1977, 2640
EcoT38I	GRGCYC	1 cut(s)	2629
EgeI	GGCGCC	1 cut(s)	1116
EheI	GGCGCC	1 cut(s)	1116
ErhI	CCWWGG	2 cut(s)	1977, 2640
Esp3I	CGTCTC	3 cut(s)	207, 373, 1009
FaeI	CATG	4 cut(s)	755, 862, 884, 2534
FaqI	GGGAC	2 cut(s)	235, 422
FatI	CATG	4 cut(s)	751, 858, 880, 2530
FauI	CCCGC	4 cut(s)	244, 348, 1334, 2686
FblI	GTMKAC	1 cut(s)	1815
FokI	GGATG	7 cut(s)	775, 1166, 1268, 1558, 1646, 1733, 2110
FriOI	GRGCYC	1 cut(s)	2629
FspBI	CTAG	6 cut(s)	302, 330, 819, 2237, 2574, 2824
GlaI	GCGC	2 cut(s)	414, 1116
GsaI	CCCAGC	1 cut(s)	1165
GsuI	CTGGAG	3 cut(s)	1456, 1704, 2228
HaeII	RGCGCY	1 cut(s)	1118
HaeIII	GGCC	4 cut(s)	8, 45, 1797, 2627
HapII	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2095
HgaI	GACGC	2 cut(s)	419, 1603
HhaI	GCGC	2 cut(s)	415, 1117
Hin1I	GRCGYC	1 cut(s)	1115
Hin1II	CATG	4 cut(s)	755, 862, 884, 2534
Hin6I	GCGC	2 cut(s)	413, 1115
HinP1I	GCGC	2 cut(s)	413, 1115
HpaII	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2095
HphI	GGTGA	7 cut(s)	109, 554, 656, 898, 1423, 2237, 2435
Hpy166II	GTNNAC	4 cut(s)	394, 577, 1492, 1816
Hpy8I	GTNNAC	4 cut(s)	394, 577, 1492, 1816
Hpy99I	CGWCG	1 cut(s)	1322
HpyAV	CCTTC	8 cut(s)	163, 193, 202, 268, 1253, 1902, 2036, 2683
HpyCH4III	ACNGT	5 cut(s)	959, 1228, 1702, 2276, 2372
HpyCH4IV	ACGT	3 cut(s)	440, 812, 1320
HpyCH4V	TGCA	7 cut(s)	777, 949, 1311, 1373, 1642, 1991, 2614
HpyF10VI	GCNNNNNNNGC	3 cut(s)	410, 1123, 1887
HpyF3I	CTNAG	5 cut(s)	801, 1731, 1947, 1967, 2682
HpySE526I	ACGT	3 cut(s)	440, 812, 1320
Hsp92I	GRCGYC	1 cut(s)	1115
Hsp92II	CATG	4 cut(s)	755, 862, 884, 2534
HspAI	GCGC	2 cut(s)	413, 1115
KasI	GGCGCC	1 cut(s)	1114
Kpn2I	TCCGGA	1 cut(s)	2094
KspI	CCGCGG	1 cut(s)	356
LguI	GCTCTTC	1 cut(s)	1245
LmnI	GCTCC	5 cut(s)	69, 237, 686, 2123, 2527
Lsp1109I	GCAGC	6 cut(s)	1466, 1521, 1714, 1930, 1975, 2626
LweI	GCATC	4 cut(s)	369, 753, 1521, 2033
MaeI	CTAG	6 cut(s)	302, 330, 819, 2237, 2574, 2824
MaeII	ACGT	3 cut(s)	440, 812, 1320
MaeIII	GTNAC	2 cut(s)	1994, 2225
MfeI	CAATTG	1 cut(s)	605
MflI	RGATCY	7 cut(s)	341, 991, 1355, 1785, 1972, 2036, 2320
MhlI	GDGCHC	3 cut(s)	66, 2509, 2629
Mly113I	GGCGCC	1 cut(s)	1115
MlyI	GAGTC	5 cut(s)	266, 341, 1595, 1855, 2275
MmeI	TCCRAC	5 cut(s)	60, 369, 1611, 1813, 2101
MroI	TCCGGA	1 cut(s)	2094
MroXI	GAANNNNTTC	2 cut(s)	1263, 2791
MseI	TTAA	4 cut(s)	939, 1215, 1955, 2517
MslI	CAYNNNNRTG	3 cut(s)	2315, 2490, 2760
MspA1I	CMGCKG	2 cut(s)	355, 1682
MspCI	CTTAAG	1 cut(s)	1214
MspI	CCGG	9 cut(s)	21, 55, 269, 322, 339, 428, 435, 491, 2095
MspR9I	CCNGG	7 cut(s)	269, 1150, 1435, 1501, 1601, 2034, 2406
MunI	CAATTG	1 cut(s)	605
Mva1269I	GAATGC	2 cut(s)	779, 1366
MvaI	CCWGG	6 cut(s)	1150, 1435, 1501, 1601, 2034, 2406
MvnI	CGCG	2 cut(s)	355, 413
MwoI	GCNNNNNNNGC	3 cut(s)	410, 1123, 1887
NarI	GGCGCC	1 cut(s)	1115
NciI	CCSGG	1 cut(s)	269
NlaIII	CATG	4 cut(s)	755, 862, 884, 2534
NlaIV	GGNNCC	6 cut(s)	326, 343, 1116, 2234, 2627, 2628
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	2 cut(s)	1994, 2225
NspI	RCATGY	1 cut(s)	2534
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	1 cut(s)	2534
PagI	TCATGA	1 cut(s)	880
PceI	AGGCCT	1 cut(s)	1797
PciSI	GCTCTTC	1 cut(s)	1245
PctI	GAATGC	2 cut(s)	779, 1366
PdmI	GAANNNNTTC	2 cut(s)	1263, 2791
PflMI	CCANNNNNTGG	1 cut(s)	742
PfoI	TCCNGGA	1 cut(s)	2032
PinAI	ACCGGT	1 cut(s)	434
PleI	GAGTC	5 cut(s)	266, 341, 1594, 1854, 2275
PluTI	GGCGCC	1 cut(s)	1118
PpsI	GAGTC	5 cut(s)	266, 341, 1594, 1854, 2275
PsiI	TTATAA	1 cut(s)	2261
Psp1406I	AACGTT	1 cut(s)	812
Psp6I	CCWGG	6 cut(s)	1148, 1433, 1499, 1599, 2032, 2404
PspFI	CCCAGC	1 cut(s)	1161
PspGI	CCWGG	6 cut(s)	1148, 1433, 1499, 1599, 2032, 2404
PspN4I	GGNNCC	6 cut(s)	326, 343, 1116, 2234, 2627, 2628
PspOMI	GGGCCC	1 cut(s)	2625
PspPI	GGNCC	4 cut(s)	2232, 2625, 2626, 2692
PsrI	GAACNNNNNNTAC	4 cut(s)	1047, 1079, 2122, 2154
PstI	CTGCAG	1 cut(s)	1375
PstNI	CAGNNNCTG	3 cut(s)	1132, 2039, 2274
PsuI	RGATCY	7 cut(s)	341, 991, 1355, 1785, 1972, 2036, 2320
PvuII	CAGCTG	1 cut(s)	1682
RsaI	GTAC	4 cut(s)	439, 1101, 1716, 2273
RsaNI	GTAC	4 cut(s)	438, 1100, 1715, 2272
RseI	CAYNNNNRTG	3 cut(s)	2315, 2490, 2760
SacII	CCGCGG	1 cut(s)	356
SapI	GCTCTTC	1 cut(s)	1245
SaqAI	TTAA	4 cut(s)	939, 1215, 1955, 2517
Sau96I	GGNCC	4 cut(s)	2232, 2625, 2626, 2692
SchI	GAGTC	5 cut(s)	266, 341, 1595, 1855, 2275
ScrFI	CCNGG	7 cut(s)	269, 1150, 1435, 1501, 1601, 2034, 2406
SduI	GDGCHC	3 cut(s)	66, 2509, 2629
SfaNI	GCATC	4 cut(s)	369, 753, 1521, 2033
SfcI	CTRYAG	2 cut(s)	1371, 2392
SfoI	GGCGCC	1 cut(s)	1116
Sfr303I	CCGCGG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	446
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	356
SinI	GGWCC	2 cut(s)	2232, 2692
SmiMI	CAYNNNNRTG	3 cut(s)	2315, 2490, 2760
SmlI	CTYRAG	4 cut(s)	791, 1214, 2508, 2553
SmoI	CTYRAG	4 cut(s)	791, 1214, 2508, 2553
SphI	GCATGC	1 cut(s)	2534
SseBI	AGGCCT	1 cut(s)	1797
SsiI	CCGC	9 cut(s)	5, 237, 353, 355, 374, 382, 982, 1341, 2679
SspDI	GGCGCC	1 cut(s)	1114
SspI	AATATT	1 cut(s)	1927
SspMI	CTAG	6 cut(s)	302, 330, 819, 2237, 2574, 2824
StuI	AGGCCT	1 cut(s)	1797
StyD4I	CCNGG	7 cut(s)	267, 1148, 1433, 1499, 1599, 2032, 2404
StyI	CCWWGG	2 cut(s)	1977, 2640
TaaI	ACNGT	5 cut(s)	959, 1228, 1702, 2276, 2372
TaiI	ACGT	3 cut(s)	443, 815, 1323
TaqI	TCGA	7 cut(s)	72, 446, 555, 567, 692, 926, 2068
TatI	WGTACW	1 cut(s)	1714
TauI	GCSGC	4 cut(s)	8, 355, 377, 385
Tru1I	TTAA	4 cut(s)	939, 1215, 1955, 2517
Tru9I	TTAA	4 cut(s)	939, 1215, 1955, 2517
TscAI	CASTG	3 cut(s)	964, 1086, 2377
TseFI	GTSAC	2 cut(s)	1994, 2225
TseI	GCWGC	6 cut(s)	1454, 1509, 1727, 1943, 1988, 2614
Tsp45I	GTSAC	2 cut(s)	1994, 2225
TspGWI	ACGGA	2 cut(s)	708, 838
TspRI	CASTG	3 cut(s)	964, 1086, 2377
Van91I	CCANNNNNTGG	1 cut(s)	742
Vha464I	CTTAAG	1 cut(s)	1214
VpaK11BI	GGWCC	2 cut(s)	2232, 2692
XapI	RAATTY	8 cut(s)	16, 509, 632, 971, 1408, 1529, 1690, 2662
XceI	RCATGY	1 cut(s)	2534
XmiI	GTMKAC	1 cut(s)	1815
XmnI	GAANNNNTTC	2 cut(s)	1263, 2791
XspI	CTAG	6 cut(s)	302, 330, 819, 2237, 2574, 2824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.