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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G12400 |
| fragaria_vesca | FvH4_1g01880 |
| malus_domestica | MD02G1016700.v1.1 MD15G1161200.v1.1 |
| prunus_persica | Prupe.7G256400_v2.0.a1 |
| pyrus_communis | pycom02g01500 pycom02g01540 pycom15g14490 |
| rosa_chinensis | RchiOBHm_Chr1g0337751 RchiOBHm_Chr1g0337811 RchiOBHm_Chr1g0337821 RchiOBHm_Chr2g0086851 RchiOBHm_Chr2g0086861 |
| rosa_laevigata | RLG00000015810 |
| rosa_multiflora | Rmu_sc0002772.1_g000003 Rmu_sc0007954.1_g000003 Rmu_sc0009188.1_g000008 Rmu_sc0012638.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00154080 Rroxscaffold_4G00314220 |
| rosa_rugosa | Rorug01G0135600.1 Rorug01G0135700.1 Rorug01G0470300 |
| rosa_samantha | Rh1DG162800 Rh1DG162900 Rh2AG022900 Rh2AG023000 Rh2BG023600 Rh2CG023800 Rh2CG023900 Rh2DG023400 Rh2DG023500 |
| rosa_wichuraiana | Rw1G012710 Rw2G001810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 928 |
| AccI | GTMKAC | 2 cut(s) | 736, 849 |
| AccII | CGCG | 1 cut(s) | 217 |
| AciI | CCGC | 7 cut(s) | 171, 308, 467, 613, 884, 903, 1599 |
| AclI | AACGTT | 1 cut(s) | 1110 |
| AclWI | GGATC | 1 cut(s) | 1487 |
| AcoI | YGGCCR | 2 cut(s) | 1306, 1330 |
| AcsI | RAATTY | 3 cut(s) | 583, 724, 1607 |
| AcuI | CTGAAG | 1 cut(s) | 60 |
| AfaI | GTAC | 4 cut(s) | 494, 700, 889, 1571 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 831, 928, 1012, 1225, 1254 |
| AgsI | TTSAA | 3 cut(s) | 572, 1189, 1315 |
| AjnI | CCWGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| AleI | CACNNNNGTG | 1 cut(s) | 102 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 471, 503 |
| AluBI | AGCT | 6 cut(s) | 84, 360, 557, 608, 682, 1343 |
| AluI | AGCT | 6 cut(s) | 84, 360, 557, 608, 682, 1343 |
| Alw26I | GTCTC | 4 cut(s) | 195, 380, 1028, 1108 |
| AlwI | GGATC | 1 cut(s) | 1487 |
| AoxI | GGCC | 4 cut(s) | 801, 1156, 1306, 1330 |
| ApeKI | GCWGC | 6 cut(s) | 329, 519, 605, 782, 1343, 1508 |
| ApoI | RAATTY | 3 cut(s) | 583, 724, 1607 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1394, 1426 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| AspS9I | GGNCC | 4 cut(s) | 226, 964, 1157, 1379 |
| AsuHPI | GGTGA | 5 cut(s) | 451, 871, 1235, 1420, 1549 |
| AsuII | TTCGAA | 1 cut(s) | 1611 |
| AvaII | GGWCC | 3 cut(s) | 226, 964, 1379 |
| AxyI | CCTNAGG | 1 cut(s) | 578 |
| BaeGI | GKGCMC | 1 cut(s) | 1219 |
| BalI | TGGCCA | 1 cut(s) | 1332 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 900, 932 |
| BbsI | GAAGAC | 1 cut(s) | 1620 |
| BbvCI | CCTCAGC | 1 cut(s) | 204 |
| BbvI | GCAGC | 6 cut(s) | 316, 531, 617, 769, 1330, 1520 |
| BceAI | ACGGC | 2 cut(s) | 308, 1496 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1262, 1296 |
| BciT130I | CCWGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| BcoDI | GTCTC | 4 cut(s) | 195, 380, 1028, 1108 |
| BfaI | CTAG | 2 cut(s) | 417, 1455 |
| BfmI | CTRYAG | 2 cut(s) | 1294, 1506 |
| BisI | GCNGC | 7 cut(s) | 330, 468, 520, 606, 783, 1344, 1509 |
| BlpI | GCTNAGC | 2 cut(s) | 356, 609 |
| BlsI | GCNGC | 7 cut(s) | 331, 469, 521, 607, 784, 1345, 1510 |
| Bme1390I | CCNGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| Bme18I | GGWCC | 3 cut(s) | 226, 964, 1379 |
| BmgT120I | GGNCC | 4 cut(s) | 226, 964, 1157, 1379 |
| BmiI | GGNNCC | 5 cut(s) | 227, 228, 312, 402, 965 |
| BmrFI | CCNGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| BmrI | ACTGGG | 1 cut(s) | 295 |
| BmsI | GCATC | 4 cut(s) | 115, 470, 1570, 1595 |
| BmuI | ACTGGG | 1 cut(s) | 295 |
| BpiI | GAAGAC | 1 cut(s) | 1620 |
| Bpu10I | CCTNAGC | 1 cut(s) | 204 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 356, 609 |
| Bpu14I | TTCGAA | 1 cut(s) | 1611 |
| BsaAI | YACGTR | 1 cut(s) | 1046 |
| BsaJI | CCNNGG | 7 cut(s) | 395, 808, 951, 1050, 1219, 1248, 1602 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 831, 928, 1012, 1225, 1254 |
| Bse118I | RCCGGY | 1 cut(s) | 1308 |
| Bse1I | ACTGG | 5 cut(s) | 290, 502, 696, 768, 1291 |
| Bse21I | CCTNAGG | 1 cut(s) | 578 |
| Bse3DI | GCAATG | 1 cut(s) | 280 |
| BseBI | CCWGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| BseDI | CCNNGG | 7 cut(s) | 395, 808, 951, 1050, 1219, 1248, 1602 |
| BseGI | GGATG | 5 cut(s) | 124, 441, 485, 961, 1060 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 831, 928, 1012, 1225, 1254 |
| BseMI | GCAATG | 1 cut(s) | 280 |
| BseMII | CTCAG | 3 cut(s) | 195, 347, 592 |
| BseNI | ACTGG | 5 cut(s) | 290, 502, 696, 768, 1291 |
| BseRI | GAGGAG | 2 cut(s) | 50, 221 |
| BseSI | GKGCMC | 1 cut(s) | 1219 |
| BseXI | GCAGC | 6 cut(s) | 316, 531, 617, 769, 1330, 1520 |
| BsgI | GTGCAG | 2 cut(s) | 624, 1390 |
| Bsh1236I | CGCG | 1 cut(s) | 217 |
| BshFI | GGCC | 4 cut(s) | 803, 1158, 1308, 1332 |
| BsiSI | CCGG | 1 cut(s) | 1309 |
| BslFI | GGGAC | 3 cut(s) | 239, 349, 774 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 831, 928, 1012, 1225, 1254 |
| BsmAI | GTCTC | 4 cut(s) | 195, 380, 1028, 1108 |
| BsmBI | CGTCTC | 2 cut(s) | 195, 1108 |
| BsmFI | GGGAC | 3 cut(s) | 239, 349, 774 |
| BsnI | GGCC | 4 cut(s) | 803, 1158, 1308, 1332 |
| Bsp119I | TTCGAA | 1 cut(s) | 1611 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1219 |
| Bsp1407I | TGTACA | 2 cut(s) | 492, 1569 |
| Bsp143I | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 356, 609 |
| Bsp19I | CCATGG | 1 cut(s) | 951 |
| BspACI | CCGC | 7 cut(s) | 171, 308, 467, 613, 884, 903, 1599 |
| BspANI | GGCC | 4 cut(s) | 803, 1158, 1308, 1332 |
| BspCNI | CTCAG | 3 cut(s) | 196, 348, 591 |
| BspFNI | CGCG | 1 cut(s) | 217 |
| BspLI | GGNNCC | 5 cut(s) | 227, 228, 312, 402, 965 |
| BspMAI | CTGCAG | 1 cut(s) | 1510 |
| BspPI | GGATC | 1 cut(s) | 1487 |
| BspT104I | TTCGAA | 1 cut(s) | 1611 |
| BsrDI | GCAATG | 1 cut(s) | 280 |
| BsrFI | RCCGGY | 1 cut(s) | 1308 |
| BsrGI | TGTACA | 2 cut(s) | 492, 1569 |
| BsrI | ACTGG | 5 cut(s) | 290, 502, 696, 768, 1291 |
| BssAI | RCCGGY | 1 cut(s) | 1308 |
| BssECI | CCNNGG | 7 cut(s) | 395, 808, 951, 1050, 1219, 1248, 1602 |
| BssMI | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| BssNAI | GTATAC | 2 cut(s) | 737, 850 |
| BssT1I | CCWWGG | 3 cut(s) | 808, 951, 1050 |
| Bst1107I | GTATAC | 2 cut(s) | 737, 850 |
| Bst2UI | CCWGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| Bst4CI | ACNGT | 5 cut(s) | 568, 1078, 1212, 1303, 1379 |
| BstAUI | TGTACA | 2 cut(s) | 492, 1569 |
| BstBAI | YACGTR | 1 cut(s) | 1046 |
| BstBI | TTCGAA | 1 cut(s) | 1611 |
| BstC8I | GCNNGC | 4 cut(s) | 82, 165, 169, 840 |
| BstDEI | CTNAG | 6 cut(s) | 204, 356, 578, 609, 729, 1492 |
| BstDSI | CCRYGG | 2 cut(s) | 395, 951 |
| BstF5I | GGATG | 5 cut(s) | 124, 441, 485, 961, 1060 |
| BstFNI | CGCG | 1 cut(s) | 217 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstKTI | GATC | 6 cut(s) | 17, 1207, 1396, 1482, 1530, 1542 |
| BstMAI | GTCTC | 4 cut(s) | 195, 380, 1028, 1108 |
| BstMBI | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 329, 1046, 1598 |
| BstNI | CCWGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| BstNSI | RCATGY | 1 cut(s) | 426 |
| BstSCI | CCNGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| BstSFI | CTRYAG | 2 cut(s) | 1294, 1506 |
| BstSLI | GKGCMC | 1 cut(s) | 1219 |
| BstUI | CGCG | 1 cut(s) | 217 |
| BstV1I | GCAGC | 6 cut(s) | 316, 531, 617, 769, 1330, 1520 |
| BstV2I | GAAGAC | 1 cut(s) | 1620 |
| BstX2I | RGATCY | 1 cut(s) | 1479 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 1479 |
| BstZ17I | GTATAC | 2 cut(s) | 737, 850 |
| Bsu36I | CCTNAGG | 1 cut(s) | 578 |
| BsuRI | GGCC | 4 cut(s) | 803, 1158, 1308, 1332 |
| BtgI | CCRYGG | 2 cut(s) | 395, 951 |
| BtsCI | GGATG | 5 cut(s) | 124, 441, 485, 961, 1060 |
| BtsI | GCAGTG | 2 cut(s) | 303, 984 |
| BtsIMutI | CAGTG | 5 cut(s) | 303, 495, 984, 1217, 1523 |
| Cac8I | GCNNGC | 4 cut(s) | 82, 165, 169, 840 |
| CfoI | GCGC | 1 cut(s) | 219 |
| Cfr10I | RCCGGY | 1 cut(s) | 1308 |
| Cfr13I | GGNCC | 4 cut(s) | 226, 964, 1157, 1379 |
| CseI | GACGC | 1 cut(s) | 223 |
| Csp6I | GTAC | 4 cut(s) | 493, 699, 888, 1570 |
| CviAII | CATG | 5 cut(s) | 423, 942, 952, 1008, 1324 |
| CviQI | GTAC | 4 cut(s) | 493, 699, 888, 1570 |
| DdeI | CTNAG | 6 cut(s) | 204, 356, 578, 609, 729, 1492 |
| DpnI | GATC | 6 cut(s) | 16, 1206, 1395, 1481, 1529, 1541 |
| DpnII | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| EaeI | YGGCCR | 2 cut(s) | 1306, 1330 |
| Eco130I | CCWWGG | 3 cut(s) | 808, 951, 1050 |
| Eco32I | GATATC | 1 cut(s) | 1000 |
| Eco47I | GGWCC | 3 cut(s) | 226, 964, 1379 |
| Eco57I | CTGAAG | 1 cut(s) | 60 |
| Eco81I | CCTNAGG | 1 cut(s) | 578 |
| EcoO109I | RGGNCCY | 1 cut(s) | 226 |
| EcoRI | GAATTC | 2 cut(s) | 724, 1607 |
| EcoRII | CCWGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| EcoRV | GATATC | 1 cut(s) | 1000 |
| EcoT14I | CCWWGG | 3 cut(s) | 808, 951, 1050 |
| EcoT22I | ATGCAT | 1 cut(s) | 485 |
| ErhI | CCWWGG | 3 cut(s) | 808, 951, 1050 |
| Esp3I | CGTCTC | 2 cut(s) | 195, 1108 |
| FaeI | CATG | 5 cut(s) | 426, 945, 955, 1011, 1327 |
| FaqI | GGGAC | 3 cut(s) | 239, 349, 774 |
| FatI | CATG | 5 cut(s) | 422, 941, 951, 1007, 1323 |
| FauI | CCCGC | 2 cut(s) | 606, 877 |
| FblI | GTMKAC | 2 cut(s) | 736, 849 |
| Fnu4HI | GCNGC | 7 cut(s) | 330, 468, 520, 606, 783, 1344, 1509 |
| FokI | GGATG | 5 cut(s) | 131, 428, 492, 968, 1067 |
| Fsp4HI | GCNGC | 7 cut(s) | 330, 468, 520, 606, 783, 1344, 1509 |
| FspBI | CTAG | 2 cut(s) | 417, 1455 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GluI | GCNGC | 7 cut(s) | 330, 468, 520, 606, 783, 1344, 1509 |
| HaeIII | GGCC | 4 cut(s) | 803, 1158, 1308, 1332 |
| HapII | CCGG | 1 cut(s) | 1309 |
| HgaI | GACGC | 1 cut(s) | 223 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1II | CATG | 5 cut(s) | 426, 945, 955, 1011, 1327 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| HincII | GTYRAC | 1 cut(s) | 625 |
| HindII | GTYRAC | 1 cut(s) | 625 |
| HindIII | AAGCTT | 1 cut(s) | 680 |
| HinfI | GANTC | 5 cut(s) | 550, 626, 686, 938, 1315 |
| HpaII | CCGG | 1 cut(s) | 1309 |
| HphI | GGTGA | 5 cut(s) | 451, 871, 1235, 1420, 1549 |
| Hpy188I | TCNGA | 4 cut(s) | 646, 654, 1195, 1204 |
| Hpy188III | TCNNGA | 3 cut(s) | 417, 580, 967 |
| Hpy99I | CGWCG | 1 cut(s) | 650 |
| HpyAV | CCTTC | 5 cut(s) | 325, 651, 814, 926, 1551 |
| HpyCH4III | ACNGT | 5 cut(s) | 568, 1078, 1212, 1303, 1379 |
| HpyCH4IV | ACGT | 8 cut(s) | 533, 648, 1045, 1101, 1110, 1266, 1353, 1424 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 329, 1046, 1598 |
| HpyF3I | CTNAG | 6 cut(s) | 204, 356, 578, 609, 729, 1492 |
| HpySE526I | ACGT | 8 cut(s) | 533, 648, 1045, 1101, 1110, 1266, 1353, 1424 |
| Hsp92II | CATG | 5 cut(s) | 426, 945, 955, 1011, 1327 |
| HspAI | GCGC | 1 cut(s) | 217 |
| KflI | GGGWCCC | 1 cut(s) | 226 |
| Kzo9I | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| LmnI | GCTCC | 3 cut(s) | 42, 400, 1552 |
| Lsp1109I | GCAGC | 6 cut(s) | 316, 531, 617, 769, 1330, 1520 |
| LweI | GCATC | 4 cut(s) | 115, 470, 1570, 1595 |
| MaeI | CTAG | 2 cut(s) | 417, 1455 |
| MaeII | ACGT | 8 cut(s) | 533, 648, 1045, 1101, 1110, 1266, 1353, 1424 |
| MaeIII | GTNAC | 8 cut(s) | 380, 656, 1057, 1072, 1262, 1373, 1420, 1521 |
| MalI | GATC | 6 cut(s) | 16, 1206, 1395, 1481, 1529, 1541 |
| MboI | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| MboII | GAAGA | 2 cut(s) | 1522, 1625 |
| MfeI | CAATTG | 2 cut(s) | 471, 1447 |
| MflI | RGATCY | 1 cut(s) | 1479 |
| MhlI | GDGCHC | 1 cut(s) | 1219 |
| MlsI | TGGCCA | 1 cut(s) | 1332 |
| MluCI | AATT | 7 cut(s) | 471, 583, 724, 1114, 1189, 1447, 1607 |
| MluNI | TGGCCA | 1 cut(s) | 1332 |
| MlyI | GAGTC | 3 cut(s) | 559, 620, 680 |
| MmeI | TCCRAC | 4 cut(s) | 457, 516, 669, 1343 |
| Mox20I | TGGCCA | 1 cut(s) | 1332 |
| Mph1103I | ATGCAT | 1 cut(s) | 485 |
| MscI | TGGCCA | 1 cut(s) | 1332 |
| MseI | TTAA | 5 cut(s) | 243, 1083, 1113, 1146, 1627 |
| MslI | CAYNNNNRTG | 1 cut(s) | 102 |
| Msp20I | TGGCCA | 1 cut(s) | 1332 |
| MspI | CCGG | 1 cut(s) | 1309 |
| MspR9I | CCNGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| MunI | CAATTG | 2 cut(s) | 471, 1447 |
| MvaI | CCWGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| MvnI | CGCG | 1 cut(s) | 217 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 329, 1046, 1598 |
| NcoI | CCATGG | 1 cut(s) | 951 |
| NdeII | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| NlaIII | CATG | 5 cut(s) | 426, 945, 955, 1011, 1327 |
| NlaIV | GGNNCC | 5 cut(s) | 227, 228, 312, 402, 965 |
| NmeAIII | GCCGAG | 1 cut(s) | 1627 |
| NmuCI | GTSAC | 1 cut(s) | 1521 |
| NsiI | ATGCAT | 1 cut(s) | 485 |
| NspI | RCATGY | 1 cut(s) | 426 |
| NspV | TTCGAA | 1 cut(s) | 1611 |
| OliI | CACNNNNGTG | 1 cut(s) | 102 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1107 |
| PfeI | GAWTC | 2 cut(s) | 938, 1315 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 928 |
| PkrI | GCNGC | 7 cut(s) | 331, 469, 521, 607, 784, 1345, 1510 |
| PleI | GAGTC | 3 cut(s) | 558, 620, 680 |
| PpsI | GAGTC | 3 cut(s) | 558, 620, 680 |
| Ppu21I | YACGTR | 1 cut(s) | 1046 |
| PpuMI | RGGWCCY | 1 cut(s) | 226 |
| Psp1406I | AACGTT | 1 cut(s) | 1110 |
| Psp5II | RGGWCCY | 1 cut(s) | 226 |
| Psp6I | CCWGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| PspGI | CCWGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| PspN4I | GGNNCC | 5 cut(s) | 227, 228, 312, 402, 965 |
| PspPI | GGNCC | 4 cut(s) | 226, 964, 1157, 1379 |
| PspPPI | RGGWCCY | 1 cut(s) | 226 |
| PstI | CTGCAG | 1 cut(s) | 1510 |
| PsuI | RGATCY | 1 cut(s) | 1479 |
| RsaI | GTAC | 4 cut(s) | 494, 700, 889, 1571 |
| RsaNI | GTAC | 4 cut(s) | 493, 699, 888, 1570 |
| RseI | CAYNNNNRTG | 1 cut(s) | 102 |
| SaqAI | TTAA | 5 cut(s) | 243, 1083, 1113, 1146, 1627 |
| SatI | GCNGC | 7 cut(s) | 330, 468, 520, 606, 783, 1344, 1509 |
| Sau3AI | GATC | 6 cut(s) | 14, 1204, 1393, 1479, 1527, 1539 |
| Sau96I | GGNCC | 4 cut(s) | 226, 964, 1157, 1379 |
| SchI | GAGTC | 3 cut(s) | 559, 620, 680 |
| ScrFI | CCNGG | 4 cut(s) | 6, 1221, 1250, 1388 |
| SduI | GDGCHC | 1 cut(s) | 1219 |
| SfaNI | GCATC | 4 cut(s) | 115, 470, 1570, 1595 |
| SfcI | CTRYAG | 2 cut(s) | 1294, 1506 |
| SfuI | TTCGAA | 1 cut(s) | 1611 |
| SinI | GGWCC | 3 cut(s) | 226, 964, 1379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 102 |
| Sse9I | AATT | 7 cut(s) | 471, 583, 724, 1114, 1189, 1447, 1607 |
| SsiI | CCGC | 7 cut(s) | 171, 308, 467, 613, 884, 903, 1599 |
| SspI | AATATT | 1 cut(s) | 670 |
| SspMI | CTAG | 2 cut(s) | 417, 1455 |
| StyD4I | CCNGG | 4 cut(s) | 4, 1219, 1248, 1386 |
| StyI | CCWWGG | 3 cut(s) | 808, 951, 1050 |
| TaaI | ACNGT | 5 cut(s) | 568, 1078, 1212, 1303, 1379 |
| TaiI | ACGT | 8 cut(s) | 536, 651, 1048, 1104, 1113, 1269, 1356, 1427 |
| TaqI | TCGA | 3 cut(s) | 17, 1207, 1611 |
| TasI | AATT | 7 cut(s) | 471, 583, 724, 1114, 1189, 1447, 1607 |
| TatI | WGTACW | 3 cut(s) | 492, 698, 1569 |
| TauI | GCSGC | 1 cut(s) | 470 |
| TfiI | GAWTC | 2 cut(s) | 938, 1315 |
| Tru1I | TTAA | 5 cut(s) | 243, 1083, 1113, 1146, 1627 |
| Tru9I | TTAA | 5 cut(s) | 243, 1083, 1113, 1146, 1627 |
| TscAI | CASTG | 5 cut(s) | 310, 502, 991, 1217, 1530 |
| TseFI | GTSAC | 1 cut(s) | 1521 |
| TseI | GCWGC | 6 cut(s) | 329, 519, 605, 782, 1343, 1508 |
| Tsp45I | GTSAC | 1 cut(s) | 1521 |
| TspDTI | ATGAA | 2 cut(s) | 883, 930 |
| TspRI | CASTG | 5 cut(s) | 310, 502, 991, 1217, 1530 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 928 |
| VpaK11BI | GGWCC | 3 cut(s) | 226, 964, 1379 |
| XapI | RAATTY | 3 cut(s) | 583, 724, 1607 |
| XbaI | TCTAGA | 1 cut(s) | 416 |
| XceI | RCATGY | 1 cut(s) | 426 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 104 |
| XmiI | GTMKAC | 2 cut(s) | 736, 849 |
| XspI | CTAG | 2 cut(s) | 417, 1455 |
| Zsp2I | ATGCAT | 1 cut(s) | 485 |