Rh2BG023600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
1584887 .. 1588695
3809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG023600.1

Sequence Viewer

Length: 1632 bp
ATGTCAATCTTTAACTCAAAAAAACTGCTTCTTTTCCTCTCCCTTTTCCTCTTCATCGCTCTCACCTCCGGAAACACTCACATTTCTCACACATTTCGAGGCAGAGGTGGTGGTGATGTTGAGAGAGATGTGATGACAATGGATACAAGGTCTCTTGCGGATGAGAATCTGCAGAACTCGTCTCTGATTCTGGAGAAGGAGAGGACTCGCAGGAAGGACCCTCTTGATGATTTTCATAAGTACACTGGTGGATGGAATATCAGCAATGATCATTACTGGGCTTCTGTTGCTTGGACTGCGGTTCCCTTCTTTCTCTTTGCTGGTCTGTGGTTCGTGATCTTTGGGCTAAGCTTGACCCTTATTTGTCTCTGTTACTGCTGTTGCCGAAGAGAGCCTTATGGTTATTCGAGAACAGCCTATGCTCTCTCTCTCATCTTCCTTATTTTCTTCACTGTTGCGGCAATTGTTGGATGCATTGTTCTGTACACGGGTCAGGCAAAGTTCCACAGCAGTACAACAAAGACACTCGATTATGTTGTGAATCAGGCGGATACTACTGTTGAAAGCCTTCGGAATTTGTCAGGTTATCTTGGTGCCGCTAAGCGGATTGGAGTTGACTCCGTCTTTCTGCCATCAGATGTTCAGAGTAACATTGACACGACTATAACGAAACTCAACTCTGCCGCCACTAAACTTTCTAATACAACTGAAAAGAATTCAGATCGTATAGACGATGCATTGGATAGCGTAAGACTGGCTCTCATTGTCCTTGCTGCTGTTATGCTATGTTTGGCCTTTCTTGGATTTTTATTCTCCATTCTGGGGATGCAGGCTTTTGTATACTTCTTGGTGATTATTGGGTGGATTCTTGTTGCGGGCACATTCATTTTGTGTGGTGTATTTCTTCTCCTTCATAATGTGGTTGCAGATGCATGTGTTTCCATGGATGAATGGGTCCAGCACCCCACTGCCCGTACTGCTTTAGATGATCTACTCCCTTGTGTGGACAATGCTACTGCTCAAGAGACTTCATCACGCACCAAGGATACAACCTACAAACTTGTGAGCATGGTAGACAAGGTCATCAACAATATCTCAAATCTTAACAATCCACCACCCCAACTTGGACCGTTATATTTCAATCAGTCTGGCCCTCTATTACCTGTTCTTTGCAACCCATACAACACCGATCTCACTGATCGCAAGTGTGCCTCTGGTGAGGTGGGACTGCAGAATGCCACACAGGTGTGGAAGAGTTATGTGTGTAAGGTTAACACGGCAGGCATCTGTATAACTCCTGGACGGTTGACTCCCATCTTCTACGACCAAATGGAAGCTGCAGTAAATGTGAGTTATGGTCTGTATACTTATGGTCCATTCTTGGTTGATCTGCAAGACTGCACATTTGTCAGGGACACATTCACCGACATAAGTAATAGGAATTGTCCTGGCCTTCGAAAACATAGCAGCTGGATCTACATTGGGCTGGTAATGGTATCTGTAGCTGTCATGTTATCGTTGATCTTTTGGGTAATCTACGCAAGGGAACGAAGGCACCGCGTGTACACCAAGCAGTTTATGGCTGGAGGTGGAGGAACAGCGGGATTCCAAGTCCAAGACAAGGGTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

543

Amino Acids

60.27

Weight (kDa)

7.46

Isoelectric Point (pI)

31.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 593, 1554
AccI GTMKAC 3 cut(s) 840, 1074, 1364
AccII CGCG 1 cut(s) 1560
AccIII TCCGGA 1 cut(s) 68
AclWI GGATC 1 cut(s) 1481
AcsI RAATTY 2 cut(s) 574, 715
AdeI CACNNNGTG 1 cut(s) 1561
AfaI GTAC 5 cut(s) 242, 485, 514, 976, 1565
AfiI CCNNNNNNNGG 5 cut(s) 603, 822, 1003, 1124, 1621
AgsI TTSAA 2 cut(s) 563, 1141
AjnI CCWGG 2 cut(s) 1297, 1447
AleI CACNNNNGTG 2 cut(s) 1244, 1246
AloI GAACNNNNNNTCC 2 cut(s) 462, 494
AluBI AGCT 4 cut(s) 351, 1337, 1470, 1505
AluI AGCT 4 cut(s) 351, 1337, 1470, 1505
Alw26I GTCTC 4 cut(s) 156, 186, 371, 1019
AlwI GGATC 1 cut(s) 1481
Aor13HI TCCGGA 1 cut(s) 68
AoxI GGCC 3 cut(s) 792, 1150, 1450
ApeKI GCWGC 3 cut(s) 773, 1337, 1467
ApoI RAATTY 2 cut(s) 574, 715
ArsI GACNNNNNNTTYG 2 cut(s) 1388, 1420
Asp700I GAANNNNTTC 1 cut(s) 567
AspS9I GGNCC 5 cut(s) 217, 955, 1127, 1151, 1373
AsuHPI GGTGA 5 cut(s) 55, 125, 862, 1229, 1414
AsuII TTCGAA 1 cut(s) 1456
AvaII GGWCC 4 cut(s) 217, 955, 1127, 1373
BaeGI GKGCMC 1 cut(s) 881
BaeI ACNNNNGTAYC 2 cut(s) 543, 576
BanI GGYRCC 2 cut(s) 593, 1554
BbvI GCAGC 3 cut(s) 760, 1324, 1479
BccI CCATC 3 cut(s) 246, 640, 1322
BceAI ACGGC 1 cut(s) 1293
BciT130I CCWGG 2 cut(s) 1299, 1449
BciVI GTATCC 3 cut(s) 136, 544, 1039
BclI TGATCA 1 cut(s) 268
BcoDI GTCTC 4 cut(s) 156, 186, 371, 1019
BfmI CTRYAG 4 cut(s) 170, 1229, 1338, 1500
BfuI GTATCC 3 cut(s) 136, 544, 1039
BisI GCNGC 6 cut(s) 459, 597, 684, 774, 1338, 1468
BlpI GCTNAGC 2 cut(s) 347, 600
BlsI GCNGC 6 cut(s) 460, 598, 685, 775, 1339, 1469
Bme1390I CCNGG 2 cut(s) 1299, 1449
Bme18I GGWCC 4 cut(s) 217, 955, 1127, 1373
BmgT120I GGNCC 5 cut(s) 217, 955, 1127, 1151, 1373
BmiI GGNNCC 5 cut(s) 219, 303, 595, 956, 1556
BmrFI CCNGG 2 cut(s) 1299, 1449
BmrI ACTGGG 1 cut(s) 286
BmsI GCATC 5 cut(s) 461, 724, 816, 919, 1293
BmuI ACTGGG 1 cut(s) 286
BpmI CTGGAG 2 cut(s) 212, 1605
Bpu1102I GCTNAGC 2 cut(s) 347, 600
Bpu14I TTCGAA 1 cut(s) 1456
BpuEI CTTGAG 1 cut(s) 1005
BsaBI GATNNNNATC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 156
BsaJI CCNNGG 2 cut(s) 942, 1041
BsaWI WCCGGW 1 cut(s) 68
Bsc4I CCNNNNNNNGG 5 cut(s) 603, 822, 1003, 1124, 1621
Bse1I ACTGG 3 cut(s) 250, 281, 759
Bse3DI GCAATG 1 cut(s) 271
Bse8I GATNNNNATC 1 cut(s) 165
BseAI TCCGGA 1 cut(s) 68
BseBI CCWGG 2 cut(s) 1299, 1449
BseDI CCNNGG 2 cut(s) 942, 1041
BseGI GGATG 5 cut(s) 166, 257, 476, 831, 952
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 5 cut(s) 603, 822, 1003, 1124, 1621
BseMI GCAATG 1 cut(s) 271
BseNI ACTGG 3 cut(s) 250, 281, 759
BseSI GKGCMC 1 cut(s) 881
BseXI GCAGC 3 cut(s) 760, 1324, 1479
BsgI GTGCAG 1 cut(s) 1384
Bsh1236I CGCG 1 cut(s) 1560
BshFI GGCC 3 cut(s) 794, 1152, 1452
BshNI GGYRCC 2 cut(s) 593, 1554
BsiSI CCGG 1 cut(s) 69
BslFI GGGAC 2 cut(s) 1239, 1427
BslI CCNNNNNNNGG 5 cut(s) 603, 822, 1003, 1124, 1621
BsmAI GTCTC 4 cut(s) 156, 186, 371, 1019
BsmBI CGTCTC 1 cut(s) 186
BsmFI GGGAC 2 cut(s) 1239, 1427
BsmI GAATGC 1 cut(s) 1240
BsnI GGCC 3 cut(s) 794, 1152, 1452
Bso31I GGTCTC 1 cut(s) 156
Bsp119I TTCGAA 1 cut(s) 1456
Bsp1286I GDGCHC 1 cut(s) 881
Bsp13I TCCGGA 1 cut(s) 68
Bsp1407I TGTACA 2 cut(s) 483, 1563
Bsp143I GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
Bsp1720I GCTNAGC 2 cut(s) 347, 600
Bsp19I CCATGG 1 cut(s) 942
BspANI GGCC 3 cut(s) 794, 1152, 1452
BspEI TCCGGA 1 cut(s) 68
BspFNI CGCG 1 cut(s) 1560
BspLI GGNNCC 5 cut(s) 219, 303, 595, 956, 1556
BspMAI CTGCAG 3 cut(s) 174, 1233, 1342
BspPI GGATC 1 cut(s) 1481
BspT104I TTCGAA 1 cut(s) 1456
BspT107I GGYRCC 2 cut(s) 593, 1554
BspTNI GGTCTC 1 cut(s) 156
BsrDI GCAATG 1 cut(s) 271
BsrGI TGTACA 2 cut(s) 483, 1563
BsrI ACTGG 3 cut(s) 250, 281, 759
BssECI CCNNGG 2 cut(s) 942, 1041
BssMI GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
BssNAI GTATAC 2 cut(s) 841, 1365
BssT1I CCWWGG 2 cut(s) 942, 1041
Bst1107I GTATAC 2 cut(s) 841, 1365
Bst2UI CCWGG 2 cut(s) 1299, 1449
Bst4CI ACNGT 4 cut(s) 454, 559, 1131, 1305
Bst6I CTCTTC 3 cut(s) 56, 382, 1247
BstAUI TGTACA 2 cut(s) 483, 1563
BstBI TTCGAA 1 cut(s) 1456
BstC8I GCNNGC 3 cut(s) 831, 877, 1282
BstDEI CTNAG 3 cut(s) 347, 600, 1629
BstDSI CCRYGG 1 cut(s) 942
BstF5I GGATG 5 cut(s) 166, 257, 476, 831, 952
BstFNI CGCG 1 cut(s) 1560
BstKTI GATC 9 cut(s) 271, 339, 724, 991, 1192, 1201, 1390, 1476, 1524
BstMAI GTCTC 4 cut(s) 156, 186, 371, 1019
BstMBI GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
BstMWI GCNNNNNNNGC 3 cut(s) 287, 296, 977
BstNI CCWGG 2 cut(s) 1299, 1449
BstNSI RCATGY 1 cut(s) 936
BstSCI CCNGG 2 cut(s) 1297, 1447
BstSFI CTRYAG 4 cut(s) 170, 1229, 1338, 1500
BstSLI GKGCMC 1 cut(s) 881
BstUI CGCG 1 cut(s) 1560
BstV1I GCAGC 3 cut(s) 760, 1324, 1479
BstX2I RGATCY 1 cut(s) 1473
BstYI RGATCY 1 cut(s) 1473
BstZ17I GTATAC 2 cut(s) 841, 1365
BsuI GTATCC 3 cut(s) 136, 544, 1039
BsuRI GGCC 3 cut(s) 794, 1152, 1452
BtgI CCRYGG 1 cut(s) 942
BtgZI GCGATG 1 cut(s) 40
BtsCI GGATG 5 cut(s) 166, 257, 476, 831, 952
BtsI GCAGTG 1 cut(s) 966
BtsIMutI CAGTG 4 cut(s) 243, 450, 966, 1194
Cac8I GCNNGC 3 cut(s) 831, 877, 1282
Cfr13I GGNCC 5 cut(s) 217, 955, 1127, 1151, 1373
Csp6I GTAC 5 cut(s) 241, 484, 513, 975, 1564
CviAII CATG 4 cut(s) 933, 943, 1069, 1510
CviQI GTAC 5 cut(s) 241, 484, 513, 975, 1564
DdeI CTNAG 3 cut(s) 347, 600, 1629
DpnI GATC 9 cut(s) 270, 338, 723, 990, 1191, 1200, 1389, 1475, 1523
DpnII GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
DraIII CACNNNGTG 1 cut(s) 1561
Eam1104I CTCTTC 3 cut(s) 56, 382, 1247
EarI CTCTTC 3 cut(s) 56, 382, 1247
EciI GGCGGA 1 cut(s) 563
Eco130I CCWWGG 2 cut(s) 942, 1041
Eco31I GGTCTC 1 cut(s) 156
Eco47I GGWCC 4 cut(s) 217, 955, 1127, 1373
EcoO109I RGGNCCY 1 cut(s) 217
EcoRI GAATTC 1 cut(s) 715
EcoRII CCWGG 2 cut(s) 1297, 1447
EcoT14I CCWWGG 2 cut(s) 942, 1041
EcoT22I ATGCAT 3 cut(s) 476, 739, 934
ErhI CCWWGG 2 cut(s) 942, 1041
Esp3I CGTCTC 1 cut(s) 186
FaeI CATG 4 cut(s) 936, 946, 1072, 1513
FalI AAGNNNNNCTT 2 cut(s) 379, 411
FaqI GGGAC 2 cut(s) 1239, 1427
FatI CATG 4 cut(s) 932, 942, 1068, 1509
FauI CCCGC 2 cut(s) 868, 1594
FbaI TGATCA 1 cut(s) 268
FblI GTMKAC 3 cut(s) 840, 1074, 1364
Fnu4HI GCNGC 6 cut(s) 459, 597, 684, 774, 1338, 1468
FokI GGATG 5 cut(s) 173, 264, 483, 838, 959
Fsp4HI GCNGC 6 cut(s) 459, 597, 684, 774, 1338, 1468
GluI GCNGC 6 cut(s) 459, 597, 684, 774, 1338, 1468
GsuI CTGGAG 2 cut(s) 212, 1605
HaeIII GGCC 3 cut(s) 794, 1152, 1452
HapII CCGG 1 cut(s) 69
Hin1II CATG 4 cut(s) 936, 946, 1072, 1513
HincII GTYRAC 3 cut(s) 616, 1273, 1308
HindII GTYRAC 3 cut(s) 616, 1273, 1308
HindIII AAGCTT 1 cut(s) 349
HinfI GANTC 8 cut(s) 166, 187, 205, 541, 617, 865, 1309, 1605
HpaI GTTAAC 1 cut(s) 1273
HpaII CCGG 1 cut(s) 69
HphI GGTGA 5 cut(s) 55, 125, 862, 1229, 1414
Hpy188I TCNGA 5 cut(s) 186, 573, 637, 645, 721
Hpy188III TCNNGA 6 cut(s) 69, 191, 224, 334, 408, 1022
HpyAV CCTTC 7 cut(s) 190, 208, 316, 578, 920, 1463, 1545
HpyCH4III ACNGT 4 cut(s) 454, 559, 1131, 1305
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 296, 977
HpyF3I CTNAG 3 cut(s) 347, 600, 1629
Hsp92II CATG 4 cut(s) 936, 946, 1072, 1513
Kpn2I TCCGGA 1 cut(s) 68
Ksp22I TGATCA 1 cut(s) 268
KspAI GTTAAC 1 cut(s) 1273
Kzo9I GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
Lsp1109I GCAGC 3 cut(s) 760, 1324, 1479
LweI GCATC 5 cut(s) 461, 724, 816, 919, 1293
MaeIII GTNAC 2 cut(s) 371, 647
MalI GATC 9 cut(s) 270, 338, 723, 990, 1191, 1200, 1389, 1475, 1523
MboI GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
MboII GAAGA 7 cut(s) 43, 399, 427, 439, 896, 1264, 1309
MfeI CAATTG 1 cut(s) 462
MflI RGATCY 1 cut(s) 1473
MhlI GDGCHC 1 cut(s) 881
MluCI AATT 4 cut(s) 462, 574, 715, 1441
MlyI GAGTC 3 cut(s) 199, 611, 1303
MmeI TCCRAC 1 cut(s) 448
Mph1103I ATGCAT 3 cut(s) 476, 739, 934
MroI TCCGGA 1 cut(s) 68
MroXI GAANNNNTTC 1 cut(s) 567
MseI TTAA 3 cut(s) 12, 1104, 1272
MslI CAYNNNNRTG 2 cut(s) 1244, 1246
MspA1I CMGCKG 2 cut(s) 1470, 1601
MspI CCGG 1 cut(s) 69
MspR9I CCNGG 2 cut(s) 1299, 1449
MunI CAATTG 1 cut(s) 462
Mva1269I GAATGC 1 cut(s) 1240
MvaI CCWGG 2 cut(s) 1299, 1449
MvnI CGCG 1 cut(s) 1560
MwoI GCNNNNNNNGC 3 cut(s) 287, 296, 977
NcoI CCATGG 1 cut(s) 942
NdeII GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
NlaIII CATG 4 cut(s) 936, 946, 1072, 1513
NlaIV GGNNCC 5 cut(s) 219, 303, 595, 956, 1556
NsiI ATGCAT 3 cut(s) 476, 739, 934
NspI RCATGY 1 cut(s) 936
NspV TTCGAA 1 cut(s) 1456
OliI CACNNNNGTG 2 cut(s) 1244, 1246
PcsI WCGNNNNNNNCGW 1 cut(s) 665
PctI GAATGC 1 cut(s) 1240
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 5 cut(s) 166, 187, 541, 865, 1605
PflFI GACNNNGTC 2 cut(s) 620, 1079
PfoI TCCNGGA 1 cut(s) 1297
PkrI GCNGC 6 cut(s) 460, 598, 685, 775, 1339, 1469
PleI GAGTC 3 cut(s) 199, 611, 1303
PpsI GAGTC 3 cut(s) 199, 611, 1303
PpuMI RGGWCCY 1 cut(s) 217
Psp5II RGGWCCY 1 cut(s) 217
Psp6I CCWGG 2 cut(s) 1297, 1447
PspGI CCWGG 2 cut(s) 1297, 1447
PspN4I GGNNCC 5 cut(s) 219, 303, 595, 956, 1556
PspPI GGNCC 5 cut(s) 217, 955, 1127, 1151, 1373
PspPPI RGGWCCY 1 cut(s) 217
PstI CTGCAG 3 cut(s) 174, 1233, 1342
PsuI RGATCY 1 cut(s) 1473
PsyI GACNNNGTC 2 cut(s) 620, 1079
PvuII CAGCTG 1 cut(s) 1470
RsaI GTAC 5 cut(s) 242, 485, 514, 976, 1565
RsaNI GTAC 5 cut(s) 241, 484, 513, 975, 1564
RseI CAYNNNNRTG 2 cut(s) 1244, 1246
SaqAI TTAA 3 cut(s) 12, 1104, 1272
SatI GCNGC 6 cut(s) 459, 597, 684, 774, 1338, 1468
Sau3AI GATC 9 cut(s) 268, 336, 721, 988, 1189, 1198, 1387, 1473, 1521
Sau96I GGNCC 5 cut(s) 217, 955, 1127, 1151, 1373
SchI GAGTC 3 cut(s) 199, 611, 1303
ScrFI CCNGG 2 cut(s) 1299, 1449
SduI GDGCHC 1 cut(s) 881
SfaNI GCATC 5 cut(s) 461, 724, 816, 919, 1293
SfcI CTRYAG 4 cut(s) 170, 1229, 1338, 1500
SfuI TTCGAA 1 cut(s) 1456
SinI GGWCC 4 cut(s) 217, 955, 1127, 1373
SmiMI CAYNNNNRTG 2 cut(s) 1244, 1246
SmlI CTYRAG 1 cut(s) 1020
SmoI CTYRAG 1 cut(s) 1020
Sse9I AATT 4 cut(s) 462, 574, 715, 1441
StyD4I CCNGG 2 cut(s) 1297, 1447
StyI CCWWGG 2 cut(s) 942, 1041
TaaI ACNGT 4 cut(s) 454, 559, 1131, 1305
TaqI TCGA 4 cut(s) 97, 407, 528, 1456
TasI AATT 4 cut(s) 462, 574, 715, 1441
TatI WGTACW 4 cut(s) 240, 483, 512, 1563
TauI GCSGC 3 cut(s) 461, 599, 686
TfiI GAWTC 5 cut(s) 166, 187, 541, 865, 1605
Tru1I TTAA 3 cut(s) 12, 1104, 1272
Tru9I TTAA 3 cut(s) 12, 1104, 1272
TscAI CASTG 4 cut(s) 250, 457, 973, 1201
TseI GCWGC 3 cut(s) 773, 1337, 1467
TspDTI ATGAA 6 cut(s) 43, 224, 874, 902, 963, 1020
TspGWI ACGGA 1 cut(s) 610
TspRI CASTG 4 cut(s) 250, 457, 973, 1201
Tth111I GACNNNGTC 2 cut(s) 620, 1079
VpaK11BI GGWCC 4 cut(s) 217, 955, 1127, 1373
XapI RAATTY 2 cut(s) 574, 715
XceI RCATGY 1 cut(s) 936
XcmI CCANNNNNNNNNTGG 1 cut(s) 1576
XmiI GTMKAC 3 cut(s) 840, 1074, 1364
XmnI GAANNNNTTC 1 cut(s) 567
Zsp2I ATGCAT 3 cut(s) 476, 739, 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.