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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G12400 |
| fragaria_vesca | FvH4_1g01880 |
| malus_domestica | MD02G1016700.v1.1 MD15G1161200.v1.1 |
| prunus_persica | Prupe.7G256400_v2.0.a1 |
| pyrus_communis | pycom02g01500 pycom02g01540 pycom15g14490 |
| rosa_chinensis | RchiOBHm_Chr1g0337751 RchiOBHm_Chr1g0337811 RchiOBHm_Chr1g0337821 RchiOBHm_Chr2g0086851 RchiOBHm_Chr2g0086861 |
| rosa_laevigata | RLG00000015810 |
| rosa_multiflora | Rmu_sc0002772.1_g000003 Rmu_sc0007954.1_g000003 Rmu_sc0009188.1_g000008 Rmu_sc0012638.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00154080 Rroxscaffold_4G00314220 |
| rosa_rugosa | Rorug01G0135600.1 Rorug01G0135700.1 Rorug01G0470300 |
| rosa_samantha | Rh1DG162800 Rh1DG162900 Rh2AG022900 Rh2AG023000 Rh2BG023600 Rh2CG023800 Rh2CG023900 Rh2DG023400 Rh2DG023500 |
| rosa_wichuraiana | Rw1G012710 Rw2G001810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1425 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 790 |
| AccI | GTMKAC | 2 cut(s) | 945, 1434 |
| AccII | CGCG | 1 cut(s) | 1431 |
| AccIII | TCCGGA | 2 cut(s) | 68, 441 |
| AciI | CCGC | 8 cut(s) | 164, 305, 419, 475, 555, 1102, 1209, 1429 |
| AclWI | GGATC | 3 cut(s) | 218, 231, 1352 |
| AcsI | RAATTY | 2 cut(s) | 445, 586 |
| AfaI | GTAC | 4 cut(s) | 248, 356, 385, 713 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 693, 790, 874, 995, 1090, 1173, 1492 |
| AgsI | TTSAA | 4 cut(s) | 434, 591, 813, 1012 |
| AjnI | CCWGG | 2 cut(s) | 1168, 1318 |
| AleI | CACNNNNGTG | 1 cut(s) | 1117 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 333, 365 |
| AluBI | AGCT | 4 cut(s) | 470, 629, 1341, 1376 |
| AluI | AGCT | 4 cut(s) | 470, 629, 1341, 1376 |
| Alw26I | GTCTC | 3 cut(s) | 162, 192, 890 |
| AlwI | GGATC | 3 cut(s) | 218, 231, 1352 |
| Aor13HI | TCCGGA | 2 cut(s) | 68, 441 |
| AoxI | GGCC | 3 cut(s) | 663, 1021, 1321 |
| ApeKI | GCWGC | 3 cut(s) | 467, 644, 1338 |
| ApoI | RAATTY | 2 cut(s) | 445, 586 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1259, 1291 |
| AspS9I | GGNCC | 4 cut(s) | 826, 998, 1022, 1244 |
| AsuHPI | GGTGA | 5 cut(s) | 55, 122, 145, 1100, 1285 |
| AsuII | TTCGAA | 1 cut(s) | 1327 |
| AvaII | GGWCC | 3 cut(s) | 826, 998, 1244 |
| BaeGI | GKGCMC | 1 cut(s) | 1084 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 414, 447 |
| BamHI | GGATCC | 1 cut(s) | 223 |
| BanI | GGYRCC | 1 cut(s) | 1425 |
| BbvI | GCAGC | 3 cut(s) | 479, 631, 1350 |
| BccI | CCATC | 3 cut(s) | 252, 511, 1193 |
| BceAI | ACGGC | 1 cut(s) | 1164 |
| BciT130I | CCWGG | 2 cut(s) | 1170, 1320 |
| BciVI | GTATCC | 3 cut(s) | 139, 415, 910 |
| BclI | TGATCA | 1 cut(s) | 274 |
| BcoDI | GTCTC | 3 cut(s) | 162, 192, 890 |
| BfaI | CTAG | 1 cut(s) | 626 |
| BfmI | CTRYAG | 2 cut(s) | 176, 1371 |
| BfuI | GTATCC | 3 cut(s) | 139, 415, 910 |
| BisI | GCNGC | 5 cut(s) | 468, 555, 645, 1209, 1339 |
| BlpI | GCTNAGC | 1 cut(s) | 471 |
| BlsI | GCNGC | 5 cut(s) | 469, 556, 646, 1210, 1340 |
| Bme1390I | CCNGG | 2 cut(s) | 1170, 1320 |
| Bme18I | GGWCC | 3 cut(s) | 826, 998, 1244 |
| BmgT120I | GGNCC | 4 cut(s) | 826, 998, 1022, 1244 |
| BmiI | GGNNCC | 4 cut(s) | 225, 309, 827, 1427 |
| BmrFI | CCNGG | 2 cut(s) | 1170, 1320 |
| BmrI | ACTGGG | 1 cut(s) | 292 |
| BmsI | GCATC | 5 cut(s) | 332, 595, 687, 790, 1164 |
| BmuI | ACTGGG | 1 cut(s) | 292 |
| BpmI | CTGGAG | 1 cut(s) | 1476 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 471 |
| Bpu14I | TTCGAA | 1 cut(s) | 1327 |
| BpuEI | CTTGAG | 1 cut(s) | 876 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| BsaI | GGTCTC | 2 cut(s) | 162, 890 |
| BsaJI | CCNNGG | 3 cut(s) | 912, 1084, 1168 |
| BsaWI | WCCGGW | 2 cut(s) | 68, 441 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 693, 790, 874, 995, 1090, 1173, 1492 |
| Bse1I | ACTGG | 3 cut(s) | 256, 287, 364 |
| Bse3DI | GCAATG | 2 cut(s) | 277, 321 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseAI | TCCGGA | 2 cut(s) | 68, 441 |
| BseBI | CCWGG | 2 cut(s) | 1170, 1320 |
| BseDI | CCNNGG | 3 cut(s) | 912, 1084, 1168 |
| BseGI | GGATG | 5 cut(s) | 172, 263, 347, 702, 823 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 693, 790, 874, 995, 1090, 1173, 1492 |
| BseMI | GCAATG | 2 cut(s) | 277, 321 |
| BseMII | CTCAG | 1 cut(s) | 1080 |
| BseNI | ACTGG | 3 cut(s) | 256, 287, 364 |
| BseRI | GAGGAG | 1 cut(s) | 770 |
| BseSI | GKGCMC | 1 cut(s) | 1084 |
| BseXI | GCAGC | 3 cut(s) | 479, 631, 1350 |
| BsgI | GTGCAG | 2 cut(s) | 486, 1255 |
| Bsh1236I | CGCG | 1 cut(s) | 1431 |
| BshFI | GGCC | 3 cut(s) | 665, 1023, 1323 |
| BshNI | GGYRCC | 1 cut(s) | 1425 |
| BsiSI | CCGG | 2 cut(s) | 69, 442 |
| BslFI | GGGAC | 1 cut(s) | 1298 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 693, 790, 874, 995, 1090, 1173, 1492 |
| BsmAI | GTCTC | 3 cut(s) | 162, 192, 890 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| BsmFI | GGGAC | 1 cut(s) | 1298 |
| BsmI | GAATGC | 1 cut(s) | 1111 |
| BsnI | GGCC | 3 cut(s) | 665, 1023, 1323 |
| Bso31I | GGTCTC | 2 cut(s) | 162, 890 |
| Bsp119I | TTCGAA | 1 cut(s) | 1327 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1084 |
| Bsp13I | TCCGGA | 2 cut(s) | 68, 441 |
| Bsp1407I | TGTACA | 1 cut(s) | 354 |
| Bsp143I | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 471 |
| BspACI | CCGC | 8 cut(s) | 164, 305, 419, 475, 555, 1102, 1209, 1429 |
| BspANI | GGCC | 3 cut(s) | 665, 1023, 1323 |
| BspCNI | CTCAG | 1 cut(s) | 1079 |
| BspEI | TCCGGA | 2 cut(s) | 68, 441 |
| BspFNI | CGCG | 1 cut(s) | 1431 |
| BspLI | GGNNCC | 4 cut(s) | 225, 309, 827, 1427 |
| BspMAI | CTGCAG | 1 cut(s) | 180 |
| BspPI | GGATC | 3 cut(s) | 218, 231, 1352 |
| BspT104I | TTCGAA | 1 cut(s) | 1327 |
| BspT107I | GGYRCC | 1 cut(s) | 1425 |
| BspTNI | GGTCTC | 2 cut(s) | 162, 890 |
| BsrDI | GCAATG | 2 cut(s) | 277, 321 |
| BsrGI | TGTACA | 1 cut(s) | 354 |
| BsrI | ACTGG | 3 cut(s) | 256, 287, 364 |
| BssECI | CCNNGG | 3 cut(s) | 912, 1084, 1168 |
| BssMI | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| BssNAI | GTATAC | 1 cut(s) | 1435 |
| BssT1I | CCWWGG | 2 cut(s) | 912, 1084 |
| Bst1107I | GTATAC | 1 cut(s) | 1435 |
| Bst2UI | CCWGG | 2 cut(s) | 1170, 1320 |
| Bst4CI | ACNGT | 3 cut(s) | 430, 1002, 1176 |
| Bst6I | CTCTTC | 2 cut(s) | 56, 1118 |
| BstAUI | TGTACA | 1 cut(s) | 354 |
| BstBI | TTCGAA | 1 cut(s) | 1327 |
| BstC8I | GCNNGC | 2 cut(s) | 748, 1153 |
| BstDEI | CTNAG | 3 cut(s) | 471, 1066, 1500 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1088 |
| BstF5I | GGATG | 5 cut(s) | 172, 263, 347, 702, 823 |
| BstFNI | CGCG | 1 cut(s) | 1431 |
| BstKTI | GATC | 8 cut(s) | 226, 277, 862, 1063, 1072, 1261, 1347, 1395 |
| BstMAI | GTCTC | 3 cut(s) | 162, 192, 890 |
| BstMBI | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 848 |
| BstNI | CCWGG | 2 cut(s) | 1170, 1320 |
| BstSCI | CCNGG | 2 cut(s) | 1168, 1318 |
| BstSFI | CTRYAG | 2 cut(s) | 176, 1371 |
| BstSLI | GKGCMC | 1 cut(s) | 1084 |
| BstUI | CGCG | 1 cut(s) | 1431 |
| BstV1I | GCAGC | 3 cut(s) | 479, 631, 1350 |
| BstX2I | RGATCY | 2 cut(s) | 223, 1344 |
| BstYI | RGATCY | 2 cut(s) | 223, 1344 |
| BstZ17I | GTATAC | 1 cut(s) | 1435 |
| BsuI | GTATCC | 3 cut(s) | 139, 415, 910 |
| BsuRI | GGCC | 3 cut(s) | 665, 1023, 1323 |
| BtgZI | GCGATG | 1 cut(s) | 40 |
| BtsCI | GGATG | 5 cut(s) | 172, 263, 347, 702, 823 |
| BtsI | GCAGTG | 1 cut(s) | 837 |
| BtsIMutI | CAGTG | 4 cut(s) | 249, 357, 837, 1056 |
| Cac8I | GCNNGC | 2 cut(s) | 748, 1153 |
| Cfr13I | GGNCC | 4 cut(s) | 826, 998, 1022, 1244 |
| Csp6I | GTAC | 4 cut(s) | 247, 355, 384, 712 |
| CviAII | CATG | 2 cut(s) | 940, 1381 |
| CviQI | GTAC | 4 cut(s) | 247, 355, 384, 712 |
| DdeI | CTNAG | 3 cut(s) | 471, 1066, 1500 |
| DpnI | GATC | 8 cut(s) | 225, 276, 861, 1062, 1071, 1260, 1346, 1394 |
| DpnII | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| Eam1104I | CTCTTC | 2 cut(s) | 56, 1118 |
| EarI | CTCTTC | 2 cut(s) | 56, 1118 |
| EciI | GGCGGA | 1 cut(s) | 434 |
| Eco130I | CCWWGG | 2 cut(s) | 912, 1084 |
| Eco31I | GGTCTC | 2 cut(s) | 162, 890 |
| Eco47I | GGWCC | 3 cut(s) | 826, 998, 1244 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1088 |
| EcoRI | GAATTC | 1 cut(s) | 586 |
| EcoRII | CCWGG | 2 cut(s) | 1168, 1318 |
| EcoT14I | CCWWGG | 2 cut(s) | 912, 1084 |
| EcoT22I | ATGCAT | 2 cut(s) | 347, 610 |
| ErhI | CCWWGG | 2 cut(s) | 912, 1084 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 2 cut(s) | 943, 1384 |
| FaqI | GGGAC | 1 cut(s) | 1298 |
| FatI | CATG | 2 cut(s) | 939, 1380 |
| FbaI | TGATCA | 1 cut(s) | 274 |
| FblI | GTMKAC | 2 cut(s) | 945, 1434 |
| Fnu4HI | GCNGC | 5 cut(s) | 468, 555, 645, 1209, 1339 |
| FokI | GGATG | 5 cut(s) | 179, 270, 354, 709, 830 |
| Fsp4HI | GCNGC | 5 cut(s) | 468, 555, 645, 1209, 1339 |
| FspBI | CTAG | 1 cut(s) | 626 |
| GluI | GCNGC | 5 cut(s) | 468, 555, 645, 1209, 1339 |
| GsuI | CTGGAG | 1 cut(s) | 1476 |
| HaeIII | GGCC | 3 cut(s) | 665, 1023, 1323 |
| HapII | CCGG | 2 cut(s) | 69, 442 |
| Hin1II | CATG | 2 cut(s) | 943, 1384 |
| HincII | GTYRAC | 4 cut(s) | 13, 487, 1144, 1179 |
| HindII | GTYRAC | 4 cut(s) | 13, 487, 1144, 1179 |
| HinfI | GANTC | 8 cut(s) | 172, 193, 211, 412, 488, 736, 1180, 1476 |
| HpaI | GTTAAC | 2 cut(s) | 13, 1144 |
| HpaII | CCGG | 2 cut(s) | 69, 442 |
| HphI | GGTGA | 5 cut(s) | 55, 122, 145, 1100, 1285 |
| Hpy188I | TCNGA | 4 cut(s) | 192, 508, 516, 1069 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 230, 442, 893 |
| HpyAV | CCTTC | 6 cut(s) | 147, 196, 214, 322, 1334, 1416 |
| HpyCH4III | ACNGT | 3 cut(s) | 430, 1002, 1176 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 848 |
| HpyF3I | CTNAG | 3 cut(s) | 471, 1066, 1500 |
| Hsp92II | CATG | 2 cut(s) | 943, 1384 |
| Kpn2I | TCCGGA | 2 cut(s) | 68, 441 |
| Ksp22I | TGATCA | 1 cut(s) | 274 |
| KspAI | GTTAAC | 2 cut(s) | 13, 1144 |
| Kzo9I | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| Lsp1109I | GCAGC | 3 cut(s) | 479, 631, 1350 |
| LweI | GCATC | 5 cut(s) | 332, 595, 687, 790, 1164 |
| MaeI | CTAG | 1 cut(s) | 626 |
| MaeIII | GTNAC | 1 cut(s) | 518 |
| MalI | GATC | 8 cut(s) | 225, 276, 861, 1062, 1071, 1260, 1346, 1394 |
| MboI | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| MboII | GAAGA | 4 cut(s) | 43, 767, 1135, 1180 |
| MflI | RGATCY | 2 cut(s) | 223, 1344 |
| MhlI | GDGCHC | 1 cut(s) | 1084 |
| MluCI | AATT | 3 cut(s) | 445, 586, 1312 |
| MlyI | GAGTC | 4 cut(s) | 205, 421, 482, 1174 |
| MmeI | TCCRAC | 1 cut(s) | 319 |
| Mph1103I | ATGCAT | 2 cut(s) | 347, 610 |
| MroI | TCCGGA | 2 cut(s) | 68, 441 |
| MseI | TTAA | 3 cut(s) | 12, 975, 1143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1117 |
| MspA1I | CMGCKG | 2 cut(s) | 1211, 1341 |
| MspI | CCGG | 2 cut(s) | 69, 442 |
| MspR9I | CCNGG | 2 cut(s) | 1170, 1320 |
| Mva1269I | GAATGC | 1 cut(s) | 1111 |
| MvaI | CCWGG | 2 cut(s) | 1170, 1320 |
| MvnI | CGCG | 1 cut(s) | 1431 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 293, 302, 848 |
| NdeII | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| NlaIII | CATG | 2 cut(s) | 943, 1384 |
| NlaIV | GGNNCC | 4 cut(s) | 225, 309, 827, 1427 |
| NsiI | ATGCAT | 2 cut(s) | 347, 610 |
| NspV | TTCGAA | 1 cut(s) | 1327 |
| OliI | CACNNNNGTG | 1 cut(s) | 1117 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 536 |
| PctI | GAATGC | 1 cut(s) | 1111 |
| PfeI | GAWTC | 4 cut(s) | 172, 193, 736, 1476 |
| PflFI | GACNNNGTC | 2 cut(s) | 491, 950 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 790 |
| PkrI | GCNGC | 5 cut(s) | 469, 556, 646, 1210, 1340 |
| PleI | GAGTC | 4 cut(s) | 205, 420, 482, 1174 |
| PpsI | GAGTC | 4 cut(s) | 205, 420, 482, 1174 |
| Psp6I | CCWGG | 2 cut(s) | 1168, 1318 |
| PspGI | CCWGG | 2 cut(s) | 1168, 1318 |
| PspN4I | GGNNCC | 4 cut(s) | 225, 309, 827, 1427 |
| PspPI | GGNCC | 4 cut(s) | 826, 998, 1022, 1244 |
| PstI | CTGCAG | 1 cut(s) | 180 |
| PsuI | RGATCY | 2 cut(s) | 223, 1344 |
| PsyI | GACNNNGTC | 2 cut(s) | 491, 950 |
| PvuII | CAGCTG | 1 cut(s) | 1341 |
| RsaI | GTAC | 4 cut(s) | 248, 356, 385, 713 |
| RsaNI | GTAC | 4 cut(s) | 247, 355, 384, 712 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1117 |
| SaqAI | TTAA | 3 cut(s) | 12, 975, 1143 |
| SatI | GCNGC | 5 cut(s) | 468, 555, 645, 1209, 1339 |
| Sau3AI | GATC | 8 cut(s) | 223, 274, 859, 1060, 1069, 1258, 1344, 1392 |
| Sau96I | GGNCC | 4 cut(s) | 826, 998, 1022, 1244 |
| SchI | GAGTC | 4 cut(s) | 205, 421, 482, 1174 |
| ScrFI | CCNGG | 2 cut(s) | 1170, 1320 |
| SduI | GDGCHC | 1 cut(s) | 1084 |
| SfaNI | GCATC | 5 cut(s) | 332, 595, 687, 790, 1164 |
| SfcI | CTRYAG | 2 cut(s) | 176, 1371 |
| SfuI | TTCGAA | 1 cut(s) | 1327 |
| SinI | GGWCC | 3 cut(s) | 826, 998, 1244 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1117 |
| SmlI | CTYRAG | 1 cut(s) | 891 |
| SmoI | CTYRAG | 1 cut(s) | 891 |
| Sse9I | AATT | 3 cut(s) | 445, 586, 1312 |
| SsiI | CCGC | 8 cut(s) | 164, 305, 419, 475, 555, 1102, 1209, 1429 |
| SspMI | CTAG | 1 cut(s) | 626 |
| StyD4I | CCNGG | 2 cut(s) | 1168, 1318 |
| StyI | CCWWGG | 2 cut(s) | 912, 1084 |
| TaaI | ACNGT | 3 cut(s) | 430, 1002, 1176 |
| TaqI | TCGA | 4 cut(s) | 97, 399, 1072, 1327 |
| TasI | AATT | 3 cut(s) | 445, 586, 1312 |
| TatI | WGTACW | 4 cut(s) | 246, 354, 383, 711 |
| TauI | GCSGC | 2 cut(s) | 557, 1211 |
| TfiI | GAWTC | 4 cut(s) | 172, 193, 736, 1476 |
| Tru1I | TTAA | 3 cut(s) | 12, 975, 1143 |
| Tru9I | TTAA | 3 cut(s) | 12, 975, 1143 |
| TscAI | CASTG | 4 cut(s) | 256, 364, 844, 1063 |
| TseI | GCWGC | 3 cut(s) | 467, 644, 1338 |
| TspDTI | ATGAA | 4 cut(s) | 43, 230, 745, 834 |
| TspGWI | ACGGA | 1 cut(s) | 481 |
| TspRI | CASTG | 4 cut(s) | 256, 364, 844, 1063 |
| Tth111I | GACNNNGTC | 2 cut(s) | 491, 950 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 790 |
| VpaK11BI | GGWCC | 3 cut(s) | 826, 998, 1244 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1088 |
| XapI | RAATTY | 2 cut(s) | 445, 586 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1447 |
| XmiI | GTMKAC | 2 cut(s) | 945, 1434 |
| XspI | CTAG | 1 cut(s) | 626 |
| Zsp2I | ATGCAT | 2 cut(s) | 347, 610 |