Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0006124

Physical Location & Seq

Genomic Coordinates Forward (+)

8713247 .. 8717016

Gene Structure 3770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1107800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGGTGGAGATGAAGGAGGAAGAATATCAGAAAATGGCGGTTTTCAAAGGCAGGGAAAAATTCGGGTCCAATGTTTTGCACATGTTTGTGGCTCTGGGTATTTGGCTGGGTACAATCCATTTCAACGTGGGTCTGATTCTCTTCACTATATTCTTCCTTCCATTTTCCAAGGCCCTTCTTGTATTTGGGTTGCTTGTGTTGTTTATGATCATCCCAGTTGATGAAAAGAGCAAAATAGGAAGATCACTTTCCAGGTACATATGTAAGCATGCCTGTGCTTATTTTCCTGTGACGCTGTACGCAGAGGATATCAATGCCTTTGATCCCAATCGCGCTTATGTCTTTGGTTATGAACCACATTCGGTTTTGCCAATTGGTGTTGTTGCACTTGCTGACCTTACTGGGTTCTTGCCTCTCCCCAAAATTAAGGCCCTTGCGAGTAGCGCGGTGTTCTACACACCATTCTTGAGACATATATGGACATGGTTGGGTCTTGCACCGGCCACAAAAAGTAATTTTATCTCCCACCTATCCGCTGGTTATAGTTGCATCATTGTGCCTGGTGGAGTGCAGGAGACATTTTACATGGAGCATGGCACTGAGATAGCATTTCTCAAGTCGAGAAGAGGTTTTGTTCGCATAGCCATGGAGCTGGGCCATCCCCTGGTTCCAGTTTTCTGCTTTGGTCAGTCAAATGTTTACAAGTGGTGGAAGCCAAGTGGAGAATTATTTTTGAAGTTTGCTAGAGCTATCAAGTTCACCCCAATTTTCTTCTGGGGAGTATTTGGAACTCCGGTACCCTACCGTCATCCAATGCATGTGGTGGTCGGAAAACCAATTGAACTCAAGAAAACATCACAACCCACGATGGAAGAGGTGAACGAAGTGCACGGTCAGTTCGTTGCAGCACTAGAGGATCTTTTCGAAAGGCACAAGGCCCGGGTTGGTCACGCCGATCTTCGATTGAAAATTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006996 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0031984 GO:0034389 GO:0042175 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:0071840 GO:0098827 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko04975 map00561 map04975

Pfam Domains

Protein Families

DAGAT

Protein Analysis

326

Amino Acids

36.85

Weight (kDa)

9.3

Isoelectric Point (pI)

39.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGAT	PF03982	50 - 322	1.1e-78	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51520
fragaria_vesca	FvH4_1g09760 FvH4_1g09760
malus_domestica	MD02G1107700.v1.1 MD02G1107800.v1.1 MD15G1227200.v1.1
prunus_persica	Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1
pyrus_communis	pycom02g08660 pycom15g20210
rosa_chinensis	RchiOBHm_Chr2g0096691
rosa_laevigata	RLG00000016662 RLG00000036260
rosa_multiflora	Rmu_sc0003565.1_g000021
rosa_roxburghii	Rroxscaffold_2G00145410 Rroxscaffold_6G00397690
rosa_rugosa	Rorug02G0059600 Rorug02G0059700 Rorug04G0089100
rosa_samantha	Rh2AG107100 Rh2BG109500 Rh2CG111300 Rh2DG110900 Rh5BG533300 Rh6AG230400
rosa_wichuraiana	Rw2G008300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	796
AccB1I	GGYRCC	1 cut(s)	796
AccB7I	CCANNNNNTGG	1 cut(s)	664
AccII	CGCG	2 cut(s)	333, 446
AciI	CCGC	3 cut(s)	38, 446, 534
AclWI	GGATC	2 cut(s)	317, 924
AcoI	YGGCCR	1 cut(s)	501
AcsI	RAATTY	2 cut(s)	59, 969
AfaI	GTAC	4 cut(s)	112, 257, 299, 798
AfiI	CCNNNNNNNGG	1 cut(s)	664
AflIII	ACRYGT	1 cut(s)	81
AgsI	TTSAA	5 cut(s)	46, 124, 736, 842, 967
AjnI	CCWGG	3 cut(s)	251, 559, 663
AluBI	AGCT	2 cut(s)	652, 749
AluI	AGCT	2 cut(s)	652, 749
Alw21I	GWGCWC	1 cut(s)	891
Alw26I	GTCTC	2 cut(s)	463, 569
Alw44I	GTGCAC	1 cut(s)	887
AlwI	GGATC	2 cut(s)	317, 924
Ama87I	CYCGRG	1 cut(s)	939
AoxI	GGCC	5 cut(s)	171, 429, 501, 655, 936
ApaLI	GTGCAC	1 cut(s)	887
ApeKI	GCWGC	1 cut(s)	905
ApoI	RAATTY	2 cut(s)	59, 969
Asp718I	GGTACC	1 cut(s)	796
AspLEI	GCGC	2 cut(s)	335, 446
AspS9I	GGNCC	5 cut(s)	66, 172, 430, 655, 937
AsuC2I	CCSGG	2 cut(s)	940, 941
AsuHPI	GGTGA	2 cut(s)	751, 889
AsuII	TTCGAA	1 cut(s)	924
AvaI	CYCGRG	1 cut(s)	939
AvaII	GGWCC	1 cut(s)	66
BaeGI	GKGCMC	1 cut(s)	891
BaeI	ACNNNNGTAYC	4 cut(s)	247, 280, 780, 813
BanI	GGYRCC	1 cut(s)	796
Bbv12I	GWGCWC	1 cut(s)	891
BbvI	GCAGC	1 cut(s)	917
BccI	CCATC	2 cut(s)	666, 862
BciT130I	CCWGG	3 cut(s)	253, 561, 665
BclI	TGATCA	1 cut(s)	207
BcnI	CCSGG	2 cut(s)	940, 941
BcoDI	GTCTC	2 cut(s)	463, 569
BfaI	CTAG	2 cut(s)	744, 911
BisI	GCNGC	1 cut(s)	906
BlsI	GCNGC	1 cut(s)	907
Bme1390I	CCNGG	5 cut(s)	253, 561, 665, 940, 941
Bme18I	GGWCC	1 cut(s)	66
BmeT110I	CYCGRG	1 cut(s)	939
BmgT120I	GGNCC	5 cut(s)	66, 172, 430, 655, 937
BmiI	GGNNCC	3 cut(s)	67, 669, 798
BmrFI	CCNGG	5 cut(s)	253, 561, 665, 940, 941
BmrI	ACTGGG	2 cut(s)	209, 411
BmsI	GCATC	1 cut(s)	558
BmuI	ACTGGG	2 cut(s)	209, 411
Bpu14I	TTCGAA	1 cut(s)	924
BpuEI	CTTGAG	3 cut(s)	487, 599, 830
BpuMI	CCSGG	2 cut(s)	940, 941
BsaBI	GATNNNNATC	1 cut(s)	327
BsaJI	CCNNGG	4 cut(s)	168, 645, 663, 939
BsaWI	WCCGGW	1 cut(s)	793
Bsc4I	CCNNNNNNNGG	1 cut(s)	664
Bse118I	RCCGGY	1 cut(s)	499
Bse1I	ACTGG	3 cut(s)	215, 406, 671
Bse8I	GATNNNNATC	1 cut(s)	327
BseBI	CCWGG	3 cut(s)	253, 561, 665
BseDI	CCNNGG	4 cut(s)	168, 645, 663, 939
BseGI	GGATG	3 cut(s)	210, 658, 808
BseJI	GATNNNNATC	1 cut(s)	327
BseLI	CCNNNNNNNGG	1 cut(s)	664
BseMII	CTCAG	1 cut(s)	591
BseNI	ACTGG	3 cut(s)	215, 406, 671
BseSI	GKGCMC	1 cut(s)	891
BseXI	GCAGC	1 cut(s)	917
BseYI	CCCAGC	2 cut(s)	106, 652
BsgI	GTGCAG	1 cut(s)	590
Bsh1236I	CGCG	2 cut(s)	333, 446
BshFI	GGCC	5 cut(s)	173, 431, 503, 657, 938
BshNI	GGYRCC	1 cut(s)	796
BsiHKAI	GWGCWC	1 cut(s)	891
BsiHKCI	CYCGRG	1 cut(s)	939
BsiSI	CCGG	3 cut(s)	500, 794, 940
BslI	CCNNNNNNNGG	1 cut(s)	664
BsmAI	GTCTC	2 cut(s)	463, 569
BsnI	GGCC	5 cut(s)	173, 431, 503, 657, 938
BsoBI	CYCGRG	1 cut(s)	939
Bsp119I	TTCGAA	1 cut(s)	924
Bsp1286I	GDGCHC	1 cut(s)	891
Bsp143I	GATC	5 cut(s)	207, 242, 322, 916, 955
Bsp19I	CCATGG	1 cut(s)	645
BspACI	CCGC	3 cut(s)	38, 446, 534
BspANI	GGCC	5 cut(s)	173, 431, 503, 657, 938
BspCNI	CTCAG	1 cut(s)	592
BspFNI	CGCG	2 cut(s)	333, 446
BspLI	GGNNCC	3 cut(s)	67, 669, 798
BspPI	GGATC	2 cut(s)	317, 924
BspT104I	TTCGAA	1 cut(s)	924
BspT107I	GGYRCC	1 cut(s)	796
BsrFI	RCCGGY	1 cut(s)	499
BsrI	ACTGG	3 cut(s)	215, 406, 671
BssAI	RCCGGY	1 cut(s)	499
BssECI	CCNNGG	4 cut(s)	168, 645, 663, 939
BssMI	GATC	5 cut(s)	207, 242, 322, 916, 955
BssT1I	CCWWGG	2 cut(s)	168, 645
Bst2UI	CCWGG	3 cut(s)	253, 561, 665
Bst4CI	ACNGT	2 cut(s)	806, 893
Bst6I	CTCTTC	3 cut(s)	146, 619, 867
BstBI	TTCGAA	1 cut(s)	924
BstC8I	GCNNGC	1 cut(s)	270
BstDEI	CTNAG	1 cut(s)	600
BstDSI	CCRYGG	1 cut(s)	645
BstF5I	GGATG	3 cut(s)	210, 658, 808
BstFNI	CGCG	2 cut(s)	333, 446
BstHHI	GCGC	2 cut(s)	335, 446
BstKTI	GATC	5 cut(s)	210, 245, 325, 919, 958
BstMAI	GTCTC	2 cut(s)	463, 569
BstMBI	GATC	5 cut(s)	207, 242, 322, 916, 955
BstMWI	GCNNNNNNNGC	1 cut(s)	443
BstNI	CCWGG	3 cut(s)	253, 561, 665
BstNSI	RCATGY	3 cut(s)	85, 272, 821
BstSCI	CCNGG	5 cut(s)	251, 559, 663, 938, 939
BstSLI	GKGCMC	1 cut(s)	891
BstUI	CGCG	2 cut(s)	333, 446
BstV1I	GCAGC	1 cut(s)	917
BstX2I	RGATCY	1 cut(s)	916
BstXI	CCANNNNNNTGG	1 cut(s)	652
BstYI	RGATCY	1 cut(s)	916
BsuRI	GGCC	5 cut(s)	173, 431, 503, 657, 938
BtgI	CCRYGG	1 cut(s)	645
BtsCI	GGATG	3 cut(s)	210, 658, 808
BtsIMutI	CAGTG	1 cut(s)	597
Cac8I	GCNNGC	1 cut(s)	270
CfoI	GCGC	2 cut(s)	335, 446
Cfr10I	RCCGGY	1 cut(s)	499
Cfr13I	GGNCC	5 cut(s)	66, 172, 430, 655, 937
Cfr9I	CCCGGG	1 cut(s)	939
CseI	GACGC	1 cut(s)	301
Csp6I	GTAC	4 cut(s)	111, 256, 298, 797
CspCI	CAANNNNNGTGG	2 cut(s)	801, 836
CviAII	CATG	7 cut(s)	82, 269, 483, 586, 593, 646, 818
CviQI	GTAC	4 cut(s)	111, 256, 298, 797
DdeI	CTNAG	1 cut(s)	600
DpnI	GATC	5 cut(s)	209, 244, 324, 918, 957
DpnII	GATC	5 cut(s)	207, 242, 322, 916, 955
EaeI	YGGCCR	1 cut(s)	501
Eam1104I	CTCTTC	3 cut(s)	146, 619, 867
EarI	CTCTTC	3 cut(s)	146, 619, 867
Eco130I	CCWWGG	2 cut(s)	168, 645
Eco32I	GATATC	1 cut(s)	310
Eco47I	GGWCC	1 cut(s)	66
Eco88I	CYCGRG	1 cut(s)	939
EcoO109I	RGGNCCY	2 cut(s)	172, 430
EcoRII	CCWGG	3 cut(s)	251, 559, 663
EcoRV	GATATC	1 cut(s)	310
EcoT14I	CCWWGG	2 cut(s)	168, 645
EcoT22I	ATGCAT	1 cut(s)	819
ErhI	CCWWGG	2 cut(s)	168, 645
FaeI	CATG	7 cut(s)	85, 272, 486, 589, 596, 649, 821
FatI	CATG	7 cut(s)	81, 268, 482, 585, 592, 645, 817
FauNDI	CATATG	1 cut(s)	260
FbaI	TGATCA	1 cut(s)	207
Fnu4HI	GCNGC	1 cut(s)	906
FokI	GGATG	3 cut(s)	197, 645, 795
Fsp4HI	GCNGC	1 cut(s)	906
FspBI	CTAG	2 cut(s)	744, 911
GlaI	GCGC	2 cut(s)	334, 445
GluI	GCNGC	1 cut(s)	906
GsaI	CCCAGC	2 cut(s)	110, 656
HaeIII	GGCC	5 cut(s)	173, 431, 503, 657, 938
HapII	CCGG	3 cut(s)	500, 794, 940
HgaI	GACGC	1 cut(s)	301
HhaI	GCGC	2 cut(s)	335, 446
Hin1II	CATG	7 cut(s)	85, 272, 486, 589, 596, 649, 821
Hin6I	GCGC	2 cut(s)	333, 444
HinP1I	GCGC	2 cut(s)	333, 444
HinfI	GANTC	1 cut(s)	136
HpaII	CCGG	3 cut(s)	500, 794, 940
HphI	GGTGA	2 cut(s)	751, 889
Hpy166II	GTNNAC	4 cut(s)	700, 759, 880, 889
Hpy188I	TCNGA	3 cut(s)	30, 135, 830
Hpy188III	TCNNGA	3 cut(s)	466, 621, 847
Hpy8I	GTNNAC	4 cut(s)	700, 759, 880, 889
HpyAV	CCTTC	3 cut(s)	7, 167, 185
HpyCH4III	ACNGT	2 cut(s)	806, 893
HpyCH4IV	ACGT	1 cut(s)	126
HpyCH4V	TGCA	8 cut(s)	79, 386, 497, 549, 571, 817, 889, 905
HpyF10VI	GCNNNNNNNGC	1 cut(s)	443
HpyF3I	CTNAG	1 cut(s)	600
HpySE526I	ACGT	1 cut(s)	126
Hsp92II	CATG	7 cut(s)	85, 272, 486, 589, 596, 649, 821
HspAI	GCGC	2 cut(s)	333, 444
KpnI	GGTACC	1 cut(s)	800
Ksp22I	TGATCA	1 cut(s)	207
Kzo9I	GATC	5 cut(s)	207, 242, 322, 916, 955
LmnI	GCTCC	2 cut(s)	589, 649
Lsp1109I	GCAGC	1 cut(s)	917
LweI	GCATC	1 cut(s)	558
MaeI	CTAG	2 cut(s)	744, 911
MaeII	ACGT	1 cut(s)	126
MaeIII	GTNAC	2 cut(s)	289, 947
MalI	GATC	5 cut(s)	209, 244, 324, 918, 957
MboI	GATC	5 cut(s)	207, 242, 322, 916, 955
MboII	GAAGA	8 cut(s)	32, 133, 145, 252, 636, 763, 884, 950
MfeI	CAATTG	2 cut(s)	372, 837
MflI	RGATCY	1 cut(s)	916
MhlI	GDGCHC	1 cut(s)	891
MluCI	AATT	8 cut(s)	59, 372, 423, 514, 725, 765, 837, 969
MmeI	TCCRAC	1 cut(s)	808
MnlI	CCTC	6 cut(s)	10, 298, 423, 620, 868, 907
Mph1103I	ATGCAT	1 cut(s)	819
MseI	TTAA	1 cut(s)	426
MslI	CAYNNNNRTG	4 cut(s)	86, 273, 554, 644
MspA1I	CMGCKG	1 cut(s)	536
MspI	CCGG	3 cut(s)	500, 794, 940
MspR9I	CCNGG	5 cut(s)	253, 561, 665, 940, 941
MunI	CAATTG	2 cut(s)	372, 837
MvaI	CCWGG	3 cut(s)	253, 561, 665
MvnI	CGCG	2 cut(s)	333, 446
MwoI	GCNNNNNNNGC	1 cut(s)	443
NciI	CCSGG	2 cut(s)	940, 941
NcoI	CCATGG	1 cut(s)	645
NdeI	CATATG	1 cut(s)	260
NdeII	GATC	5 cut(s)	207, 242, 322, 916, 955
NlaIII	CATG	7 cut(s)	85, 272, 486, 589, 596, 649, 821
NlaIV	GGNNCC	3 cut(s)	67, 669, 798
NmuCI	GTSAC	2 cut(s)	289, 947
NsiI	ATGCAT	1 cut(s)	819
NspI	RCATGY	3 cut(s)	85, 272, 821
NspV	TTCGAA	1 cut(s)	924
PaeI	GCATGC	1 cut(s)	272
PciI	ACATGT	1 cut(s)	81
PcsI	WCGNNNNNNNCGW	1 cut(s)	897
PfeI	GAWTC	1 cut(s)	136
PflMI	CCANNNNNTGG	1 cut(s)	664
PkrI	GCNGC	1 cut(s)	907
PscI	ACATGT	1 cut(s)	81
Psp6I	CCWGG	3 cut(s)	251, 559, 663
PspFI	CCCAGC	2 cut(s)	106, 652
PspGI	CCWGG	3 cut(s)	251, 559, 663
PspN4I	GGNNCC	3 cut(s)	67, 669, 798
PspPI	GGNCC	5 cut(s)	66, 172, 430, 655, 937
PsuI	RGATCY	1 cut(s)	916
RsaI	GTAC	4 cut(s)	112, 257, 299, 798
RsaNI	GTAC	4 cut(s)	111, 256, 298, 797
RseI	CAYNNNNRTG	4 cut(s)	86, 273, 554, 644
SaqAI	TTAA	1 cut(s)	426
SatI	GCNGC	1 cut(s)	906
Sau3AI	GATC	5 cut(s)	207, 242, 322, 916, 955
Sau96I	GGNCC	5 cut(s)	66, 172, 430, 655, 937
ScrFI	CCNGG	5 cut(s)	253, 561, 665, 940, 941
SduI	GDGCHC	1 cut(s)	891
SetI	ASST	8 cut(s)	129, 257, 399, 531, 631, 654, 751, 879
SfaNI	GCATC	1 cut(s)	558
SfuI	TTCGAA	1 cut(s)	924
SinI	GGWCC	1 cut(s)	66
SmaI	CCCGGG	1 cut(s)	941
SmiMI	CAYNNNNRTG	4 cut(s)	86, 273, 554, 644
SmlI	CTYRAG	3 cut(s)	466, 614, 845
SmoI	CTYRAG	3 cut(s)	466, 614, 845
SphI	GCATGC	1 cut(s)	272
Sse9I	AATT	8 cut(s)	59, 372, 423, 514, 725, 765, 837, 969
SsiI	CCGC	3 cut(s)	38, 446, 534
SspMI	CTAG	2 cut(s)	744, 911
StyD4I	CCNGG	5 cut(s)	251, 559, 663, 938, 939
StyI	CCWWGG	2 cut(s)	168, 645
TaaI	ACNGT	2 cut(s)	806, 893
TaiI	ACGT	1 cut(s)	129
TaqI	TCGA	3 cut(s)	620, 924, 961
TasI	AATT	8 cut(s)	59, 372, 423, 514, 725, 765, 837, 969
TfiI	GAWTC	1 cut(s)	136
Tru1I	TTAA	1 cut(s)	426
Tru9I	TTAA	1 cut(s)	426
TscAI	CASTG	1 cut(s)	604
TseFI	GTSAC	2 cut(s)	289, 947
TseI	GCWGC	1 cut(s)	905
Tsp45I	GTSAC	2 cut(s)	289, 947
TspDTI	ATGAA	3 cut(s)	26, 237, 366
TspMI	CCCGGG	1 cut(s)	939
TspRI	CASTG	1 cut(s)	604
Van91I	CCANNNNNTGG	1 cut(s)	664
VneI	GTGCAC	1 cut(s)	887
VpaK11BI	GGWCC	1 cut(s)	66
XapI	RAATTY	2 cut(s)	59, 969
XceI	RCATGY	3 cut(s)	85, 272, 821
XcmI	CCANNNNNNNNNTGG	2 cut(s)	533, 771
XmaI	CCCGGG	1 cut(s)	939
XspI	CTAG	2 cut(s)	744, 911
Zsp2I	ATGCAT	1 cut(s)	819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.