Rorug04G0089100

Uncharacterized integral membrane protein (DUF2301)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000103
Physical Location & Seq
Forward (+)
13782435 .. 13786274
3840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0089100.1

Sequence Viewer

Length: 1434 bp
ATGTTGCCCAAAATGAATATGTTCATGGGTTTGCGTCTACTTGTGACATTATTGGGTTTAATCACTTCAGCTTCAGCTTCAAATATCACTACGAAAATCGTTACCACACTACCCGGTTATTCGGGAGATCTTCCTTTCACATTAGAAACCGGATATATCGGCGTAGGTGACAATGAAGAAGTGCAGCTATTTTACGTTTTTGTCGAGTCTGAGAGAAACCCTGCACAAGATCCACTTGTGTTACGATTTGGTGCAGGTCCGGGTTGCTCTGGTCTCCACGGCTTTTTCTTTGAGAGTGGTCCATTATCTTTCAATTCTGCACATTACAACGGGAGCCTACCAACACTTGAGGACAACCCCTATTCATGGACAAAGGGACTCAACATCATATTCTTGGATGCACCAGTTGGTACTGGATTCTCCTATTCAACAACCCAAGATGGTTACTATGTGGATGAATATAAATATGCGGCACAAGGCTATGAATTCCTCCAGAAGTGGCTGGAGGCACACCCTACATATGTGGAAAATCTACTCTACATTAGTGGTGAATCCTTCAGTGGCTTAATAGTTCCGATGGTTGTACAAAAGATTGTAGATGGTAATGAAAATGGAAGTGTGCCTCTAATGAATATCAAGGGATATCTGCTTCAGAACCCAGTAACGGATTCAGTTATTGATGGTAATGCAGTAATCCCTTATGCCCACCGGCTGACTCTTGTATCTGATCAACTTTATAAGGCGGCTAAAACAAGTTGCAATGGTGAATACGTGAATGTAAATTCAAGCAATGCCGCATGCATTGCTGATATCGATGTTATTGATCAGCTCATCAAGGATATAAATAAGAACAATATCTTGGAACCAGACTGTAGTACTTCATTGCCAAGATCAAAGAAGATAAGCACAGCTCGAAGATATCTCAAAGAGTTGTCCAAAGGTTTACTGAGTTCACCAACCAACGGTCCCGCAGTTTGGTGTCGGGAGTATAATTACATGCTCCTATACATCTGGGCAAACACTAAAGCTGTCCGAGATGCTCTTGGTGTCCGAATGGGCACAAAATTGTTATGGAAACCATGTAATACCACATTGACGGGTTACACTCATGAAGTCACCAGTTCTCTCAGTTATCATCTCAATCTCACAAAAAGGGCTGACCTACGTGCTTTGATATACAGTGGTGACCATGACATGTCTGTTCCTCATATTGGTACACAAGCATGGATAAATATACTGAATTTGACTGTGGATGAGTACTGGAGGACATGGTCCCTTGATGGACAAACTAAAGGATACACGAAGAAGTTAATAAATGATTTTTTCACCTTGGTATTTGCTACTGTGAAGGCAACAGGCCACCTTGCCGCAGAGTACCAGCCAAAGGAAGTTGCTAGCTTGGTTGATAGATGGATGGCTTACTACCCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2301

Protein Analysis

477

Amino Acids

53.06

Weight (kDa)

5.76

Isoelectric Point (pI)

30.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 38 - 472 1.2e-109 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 738
Acc36I ACCTGC 1 cut(s) 245
AccI GTMKAC 1 cut(s) 37
AciI CCGC 5 cut(s) 470, 743, 795, 969, 1368
AclWI GGATC 1 cut(s) 224
AcsI RAATTY 3 cut(s) 485, 781, 1240
AcuI CTGAAG 4 cut(s) 51, 57, 541, 635
AfaI GTAC 6 cut(s) 412, 585, 877, 1216, 1259, 1376
AfiI CCNNNNNNNGG 6 cut(s) 366, 664, 962, 975, 1211, 1384
AflIII ACRYGT 1 cut(s) 1194
AgsI TTSAA 4 cut(s) 81, 313, 429, 786
AjuI GAANNNNNNNTTGG 2 cut(s) 842, 874
AluBI AGCT 7 cut(s) 71, 77, 187, 829, 911, 1028, 1398
AluI AGCT 7 cut(s) 71, 77, 187, 829, 911, 1028, 1398
Alw26I GTCTC 1 cut(s) 278
AlwI GGATC 1 cut(s) 224
AoxI GGCC 1 cut(s) 1357
ApeKI GCWGC 1 cut(s) 184
ApoI RAATTY 3 cut(s) 485, 781, 1240
Asp700I GAANNNNTTC 1 cut(s) 20
AspS9I GGNCC 4 cut(s) 257, 299, 965, 1272
AsuC2I CCSGG 2 cut(s) 114, 261
AsuHPI GGTGA 7 cut(s) 179, 560, 776, 945, 1108, 1196, 1318
AsuNHI GCTAGC 1 cut(s) 1394
AvaII GGWCC 4 cut(s) 257, 299, 965, 1272
BaeGI GKGCMC 1 cut(s) 1061
BaeI ACNNNNGTAYC 2 cut(s) 705, 738
BbvI GCAGC 1 cut(s) 196
BccI CCATC 7 cut(s) 434, 571, 593, 674, 1274, 1404, 1408
BceAI ACGGC 1 cut(s) 295
BciVI GTATCC 1 cut(s) 1289
BclI TGATCA 2 cut(s) 727, 823
BcnI CCSGG 2 cut(s) 114, 261
BcoDI GTCTC 1 cut(s) 278
BfaI CTAG 1 cut(s) 1395
BfmI CTRYAG 1 cut(s) 871
BfuAI ACCTGC 1 cut(s) 245
BfuI GTATCC 1 cut(s) 1289
BglII AGATCT 1 cut(s) 127
BisI GCNGC 5 cut(s) 185, 471, 744, 795, 1368
BlsI GCNGC 5 cut(s) 186, 472, 745, 796, 1369
BmcAI AGTACT 2 cut(s) 877, 1259
Bme1390I CCNGG 2 cut(s) 114, 261
Bme18I GGWCC 4 cut(s) 257, 299, 965, 1272
BmgT120I GGNCC 4 cut(s) 257, 299, 965, 1272
BmiI GGNNCC 4 cut(s) 335, 864, 967, 1274
BmrFI CCNGG 2 cut(s) 114, 261
BmrI ACTGGG 1 cut(s) 653
BmsI GCATC 2 cut(s) 388, 1027
BmtI GCTAGC 1 cut(s) 1398
BmuI ACTGGG 1 cut(s) 653
BpmI CTGGAG 3 cut(s) 476, 524, 1282
BpuEI CTTGAG 1 cut(s) 368
BpuMI CCSGG 2 cut(s) 114, 261
Bsa29I ATCGAT 1 cut(s) 813
BsaAI YACGTR 2 cut(s) 772, 1166
BsaI GGTCTC 1 cut(s) 278
BsaJI CCNNGG 2 cut(s) 277, 1329
BsaWI WCCGGW 1 cut(s) 149
Bsc4I CCNNNNNNNGG 6 cut(s) 366, 664, 962, 975, 1211, 1384
Bse118I RCCGGY 1 cut(s) 708
Bse1I ACTGG 5 cut(s) 404, 418, 659, 1119, 1265
Bse3DI GCAATG 4 cut(s) 766, 796, 801, 881
BseCI ATCGAT 1 cut(s) 813
BseDI CCNNGG 2 cut(s) 277, 1329
BseGI GGATG 4 cut(s) 403, 460, 1258, 1419
BseLI CCNNNNNNNGG 6 cut(s) 366, 664, 962, 975, 1211, 1384
BseMI GCAATG 4 cut(s) 766, 796, 801, 881
BseMII CTCAG 3 cut(s) 201, 938, 1141
BseNI ACTGG 5 cut(s) 404, 418, 659, 1119, 1265
BseSI GKGCMC 1 cut(s) 1061
BseXI GCAGC 1 cut(s) 196
BsgI GTGCAG 4 cut(s) 203, 207, 273, 303
BshFI GGCC 1 cut(s) 1359
BshVI ATCGAT 1 cut(s) 813
BsiSI CCGG 4 cut(s) 114, 150, 260, 709
BslFI GGGAC 3 cut(s) 390, 951, 1258
BslI CCNNNNNNNGG 6 cut(s) 366, 664, 962, 975, 1211, 1384
BsmAI GTCTC 1 cut(s) 278
BsmFI GGGAC 3 cut(s) 390, 951, 1258
BsnI GGCC 1 cut(s) 1359
Bso31I GGTCTC 1 cut(s) 278
Bsp1286I GDGCHC 1 cut(s) 1061
Bsp1407I TGTACA 1 cut(s) 583
Bsp143I GATC 5 cut(s) 127, 229, 727, 823, 890
BspACI CCGC 5 cut(s) 470, 743, 795, 969, 1368
BspANI GGCC 1 cut(s) 1359
BspCNI CTCAG 3 cut(s) 202, 939, 1140
BspDI ATCGAT 1 cut(s) 813
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 4 cut(s) 335, 864, 967, 1274
BspMI ACCTGC 1 cut(s) 245
BspOI GCTAGC 1 cut(s) 1398
BspPI GGATC 1 cut(s) 224
BspTNI GGTCTC 1 cut(s) 278
BsrDI GCAATG 4 cut(s) 766, 796, 801, 881
BsrFI RCCGGY 1 cut(s) 708
BsrGI TGTACA 1 cut(s) 583
BsrI ACTGG 5 cut(s) 404, 418, 659, 1119, 1265
BssAI RCCGGY 1 cut(s) 708
BssECI CCNNGG 2 cut(s) 277, 1329
BssMI GATC 5 cut(s) 127, 229, 727, 823, 890
BssT1I CCWWGG 1 cut(s) 1329
Bst4CI ACNGT 5 cut(s) 872, 965, 1181, 1249, 1345
BstAPI GCANNNNNTGC 1 cut(s) 803
BstAUI TGTACA 1 cut(s) 583
BstBAI YACGTR 2 cut(s) 772, 1166
BstC8I GCNNGC 2 cut(s) 799, 1396
BstDEI CTNAG 3 cut(s) 210, 947, 1127
BstDSI CCRYGG 1 cut(s) 277
BstEII GGTNACC 1 cut(s) 1184
BstF5I GGATG 4 cut(s) 403, 460, 1258, 1419
BstKTI GATC 5 cut(s) 130, 232, 730, 826, 893
BstMAI GTCTC 1 cut(s) 278
BstMBI GATC 5 cut(s) 127, 229, 727, 823, 890
BstMWI GCNNNNNNNGC 1 cut(s) 803
BstNSI RCATGY 3 cut(s) 801, 1000, 1198
BstPI GGTNACC 1 cut(s) 1184
BstSCI CCNGG 2 cut(s) 112, 259
BstSFI CTRYAG 1 cut(s) 871
BstSLI GKGCMC 1 cut(s) 1061
BstV1I GCAGC 1 cut(s) 196
BstX2I RGATCY 2 cut(s) 127, 229
BstYI RGATCY 2 cut(s) 127, 229
Bsu15I ATCGAT 1 cut(s) 813
BsuI GTATCC 1 cut(s) 1289
BsuRI GGCC 1 cut(s) 1359
BsuTUI ATCGAT 1 cut(s) 813
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 4 cut(s) 403, 460, 1258, 1419
BtsIMutI CAGTG 2 cut(s) 565, 1186
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 2 cut(s) 799, 1396
CciI TCATGA 1 cut(s) 1108
Cfr10I RCCGGY 1 cut(s) 708
Cfr13I GGNCC 4 cut(s) 257, 299, 965, 1272
ClaI ATCGAT 1 cut(s) 813
CseI GACGC 1 cut(s) 23
Csp6I GTAC 6 cut(s) 411, 584, 876, 1215, 1258, 1375
CviQI GTAC 6 cut(s) 411, 584, 876, 1215, 1258, 1375
DdeI CTNAG 3 cut(s) 210, 947, 1127
DpnI GATC 5 cut(s) 129, 231, 729, 825, 892
DpnII GATC 5 cut(s) 127, 229, 727, 823, 890
Eco130I CCWWGG 1 cut(s) 1329
Eco31I GGTCTC 1 cut(s) 278
Eco32I GATATC 3 cut(s) 644, 811, 920
Eco47I GGWCC 4 cut(s) 257, 299, 965, 1272
Eco57I CTGAAG 4 cut(s) 51, 57, 541, 635
Eco91I GGTNACC 1 cut(s) 1184
EcoO65I GGTNACC 1 cut(s) 1184
EcoRI GAATTC 1 cut(s) 485
EcoRV GATATC 3 cut(s) 644, 811, 920
EcoT14I CCWWGG 1 cut(s) 1329
EcoT22I ATGCAT 1 cut(s) 803
ErhI CCWWGG 1 cut(s) 1329
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 3 cut(s) 390, 951, 1258
FauI CCCGC 1 cut(s) 976
FauNDI CATATG 1 cut(s) 520
FbaI TGATCA 2 cut(s) 727, 823
FblI GTMKAC 1 cut(s) 37
Fnu4HI GCNGC 5 cut(s) 185, 471, 744, 795, 1368
FokI GGATG 4 cut(s) 410, 467, 1265, 1426
Fsp4HI GCNGC 5 cut(s) 185, 471, 744, 795, 1368
FspBI CTAG 1 cut(s) 1395
GluI GCNGC 5 cut(s) 185, 471, 744, 795, 1368
GsuI CTGGAG 3 cut(s) 476, 524, 1282
HaeIII GGCC 1 cut(s) 1359
HapII CCGG 4 cut(s) 114, 150, 260, 709
HgaI GACGC 1 cut(s) 23
HinfI GANTC 6 cut(s) 206, 378, 417, 551, 668, 715
HpaII CCGG 4 cut(s) 114, 150, 260, 709
HphI GGTGA 7 cut(s) 179, 560, 776, 945, 1108, 1196, 1318
Hpy166II GTNNAC 4 cut(s) 38, 944, 953, 1217
Hpy188I TCNGA 6 cut(s) 211, 576, 654, 727, 1034, 1052
Hpy188III TCNNGA 4 cut(s) 123, 493, 983, 1109
Hpy8I GTNNAC 4 cut(s) 38, 944, 953, 1217
HpyAV CCTTC 2 cut(s) 565, 1342
HpyCH4III ACNGT 5 cut(s) 872, 965, 1181, 1249, 1345
HpyCH4IV ACGT 3 cut(s) 195, 771, 1165
HpyCH4V TGCA 8 cut(s) 184, 224, 254, 320, 401, 689, 759, 801
HpyF10VI GCNNNNNNNGC 1 cut(s) 803
HpyF3I CTNAG 3 cut(s) 210, 947, 1127
HpySE526I ACGT 3 cut(s) 195, 771, 1165
Ksp22I TGATCA 2 cut(s) 727, 823
Kzo9I GATC 5 cut(s) 127, 229, 727, 823, 890
LmnI GCTCC 2 cut(s) 333, 1005
Lsp1109I GCAGC 1 cut(s) 196
LweI GCATC 2 cut(s) 388, 1027
MaeI CTAG 1 cut(s) 1395
MaeII ACGT 3 cut(s) 195, 771, 1165
MaeIII GTNAC 9 cut(s) 43, 100, 167, 240, 443, 661, 1100, 1114, 1184
MalI GATC 5 cut(s) 129, 231, 729, 825, 892
MboI GATC 5 cut(s) 127, 229, 727, 823, 890
MboII GAAGA 5 cut(s) 122, 188, 910, 927, 1315
MflI RGATCY 2 cut(s) 127, 229
MhlI GDGCHC 1 cut(s) 1061
MluCI AATT 6 cut(s) 313, 485, 781, 991, 1064, 1240
MlyI GAGTC 3 cut(s) 215, 372, 709
MnlI CCTC 6 cut(s) 343, 499, 500, 633, 1215, 1257
Mph1103I ATGCAT 1 cut(s) 803
MroXI GAANNNNTTC 1 cut(s) 20
MseI TTAA 4 cut(s) 59, 566, 1310, 1432
MslI CAYNNNNRTG 1 cut(s) 1222
MspI CCGG 4 cut(s) 114, 150, 260, 709
MspR9I CCNGG 2 cut(s) 114, 261
MwoI GCNNNNNNNGC 1 cut(s) 803
NciI CCSGG 2 cut(s) 114, 261
NdeI CATATG 1 cut(s) 520
NdeII GATC 5 cut(s) 127, 229, 727, 823, 890
NheI GCTAGC 1 cut(s) 1394
NlaIV GGNNCC 4 cut(s) 335, 864, 967, 1274
NmuCI GTSAC 4 cut(s) 43, 167, 1114, 1184
NsiI ATGCAT 1 cut(s) 803
NspI RCATGY 3 cut(s) 801, 1000, 1198
PaeI GCATGC 1 cut(s) 801
PagI TCATGA 1 cut(s) 1108
PciI ACATGT 1 cut(s) 1194
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 20
PfeI GAWTC 3 cut(s) 417, 551, 668
PflFI GACNNNGTC 1 cut(s) 1270
PkrI GCNGC 5 cut(s) 186, 472, 745, 796, 1369
PleI GAGTC 3 cut(s) 214, 372, 709
PpsI GAGTC 3 cut(s) 214, 372, 709
Ppu21I YACGTR 2 cut(s) 772, 1166
PscI ACATGT 1 cut(s) 1194
PsiI TTATAA 1 cut(s) 738
PspEI GGTNACC 1 cut(s) 1184
PspN4I GGNNCC 4 cut(s) 335, 864, 967, 1274
PspPI GGNCC 4 cut(s) 257, 299, 965, 1272
PsuI RGATCY 2 cut(s) 127, 229
PsyI GACNNNGTC 1 cut(s) 1270
RsaI GTAC 6 cut(s) 412, 585, 877, 1216, 1259, 1376
RsaNI GTAC 6 cut(s) 411, 584, 876, 1215, 1258, 1375
RseI CAYNNNNRTG 1 cut(s) 1222
SaqAI TTAA 4 cut(s) 59, 566, 1310, 1432
SatI GCNGC 5 cut(s) 185, 471, 744, 795, 1368
Sau3AI GATC 5 cut(s) 127, 229, 727, 823, 890
Sau96I GGNCC 4 cut(s) 257, 299, 965, 1272
ScaI AGTACT 2 cut(s) 877, 1259
SchI GAGTC 3 cut(s) 215, 372, 709
ScrFI CCNGG 2 cut(s) 114, 261
SduI GDGCHC 1 cut(s) 1061
SfaNI GCATC 2 cut(s) 388, 1027
SfcI CTRYAG 1 cut(s) 871
SinI GGWCC 4 cut(s) 257, 299, 965, 1272
SmiMI CAYNNNNRTG 1 cut(s) 1222
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
SphI GCATGC 1 cut(s) 801
Sse9I AATT 6 cut(s) 313, 485, 781, 991, 1064, 1240
SsiI CCGC 5 cut(s) 470, 743, 795, 969, 1368
SspMI CTAG 1 cut(s) 1395
StyD4I CCNGG 2 cut(s) 112, 259
StyI CCWWGG 1 cut(s) 1329
TaaI ACNGT 5 cut(s) 872, 965, 1181, 1249, 1345
TaiI ACGT 3 cut(s) 198, 774, 1168
TaqI TCGA 3 cut(s) 204, 813, 913
TasI AATT 6 cut(s) 313, 485, 781, 991, 1064, 1240
TatI WGTACW 3 cut(s) 583, 875, 1257
TauI GCSGC 4 cut(s) 473, 746, 797, 1370
TfiI GAWTC 3 cut(s) 417, 551, 668
Tru1I TTAA 4 cut(s) 59, 566, 1310, 1432
Tru9I TTAA 4 cut(s) 59, 566, 1310, 1432
TscAI CASTG 2 cut(s) 565, 1186
TseFI GTSAC 4 cut(s) 43, 167, 1114, 1184
TseI GCWGC 1 cut(s) 184
Tsp45I GTSAC 4 cut(s) 43, 167, 1114, 1184
TspGWI ACGGA 1 cut(s) 680
TspRI CASTG 2 cut(s) 565, 1186
Tth111I GACNNNGTC 1 cut(s) 1270
VpaK11BI GGWCC 4 cut(s) 257, 299, 965, 1272
XapI RAATTY 3 cut(s) 485, 781, 1240
XceI RCATGY 3 cut(s) 801, 1000, 1198
XmiI GTMKAC 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 20
XspI CTAG 1 cut(s) 1395
ZrmI AGTACT 2 cut(s) 877, 1259
Zsp2I ATGCAT 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.