Prupe.8G149000_v2.0.a1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000103
Physical Location & Seq
Forward (+)
16322862 .. 16327497
4636 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G149000.1

Sequence Viewer

Length: 2169 bp
ATGGAGTTGGATAGAATTAGCAACTTACCAAGTGAAGTTATAGCAAAACTTTTGTCACATTTGTCGTGTGTCTCAACACGAACATATAAGCTAGTTGTGAACATTGTTGATCATGTACTCCTAGGTCACATTGGCCCCATTCACAAGTTTAAGCTTTCTCATGTAGATGGTGTAGCCACTTGGGATATTGATCGATGGATTCTTCATTTATCAAGAAACTCTATCAAAGAGTTCATACTTGAGATTCGGCAAGGGTTCAACTATACAATTCCTTCATGTTTGTTTTCTTGTCAAGATATGATCCATTTAGAGTTACTTGGATGTGTGCTAAAACCTCCATCAACATTCAAAGGCTTCAGGAATTTGAAAAGCCTTGTTTTTCAGCGTGTTACCTTGGCCCAAGTTGGGTTCCAAAATCTGATTGCTTGCTGTCCTCTGCTTGAAAGGTTGACTTTACTAGACTTCCCTTTCCCCATTCTCAAGATAGATGCTCCAAATCTCCAATTCCTTTATGTTCAAGGTGATTTTGAGGATGTCATTTTTGTGAATACCTTAAATCTCGTGGATGTTTGCATTGATTCTGAAGTTGGCCGAAGATGGGTTTCTGACAGGTCTAGCAATTTGGTCAAGTTTTTGGTTCACCTGCCTCATATTCAGAGGCTTGATATTGTGGGATTCTCTTTACAGATTTTGGCTGTTGGTGCCTTGTCAGCAAAGCTTCCTAAACCATGTCCATATTTGAAATTTCTTTCTATATGGGGTGACCGTGGTATCGGAGTACTAGTATGGCCTATTGATTCTGATGCTTATATATCTTGCGTAGGCCGACCAAGAGAGTCAGAAGTGAAATTTTTATATGGCAACCGGGTTTTCCCACTCACCCAACTGCGGCTTGTTAAAATATCCTACATCTATGACTGCAAACCTGAATTAGATTTCATCAGGTTTCTGCTTTTAAATTCTCCTGTGCTTGAGAAGATGATTGTTAAGCCTTCTTCTCCCGATGATTCTTGGGAGCTCGGTGCACAGTTGCTCAGCGAAGTGAATATGGAGCAAAGAGAACCACCCAAGTCCCGTTTGAAATCGGAGATGGAGTCGGATAGAATTAGCAACTTACCAAGTGATGTTATAGAACAAATTTTGTCACATTTGCCCATGAGAGAAGCAGTGAGGACAAGTGTTTTATCAAGCAACTGGAGATACAAATGGGCTATGCTTCGTCATCTTGTGTTTGATGATCGGTGTGTCTCTACTCAAAAGCATATAACCTTTGTGGACATTGTTGATCATGTACTCTTAGGTCACATTGGCCCCATTCACAAGTTTAGGCTTTCTCATCGAGGTCGTCCAGCCAATTGGGATATTGATTTTTGGATTCTTCATCTATCAAGAAACTCTATCAAAGAGTTAATACTTGAAATTTGGGGAGAGTACCACTACAGAATTCCTTCATATTTGTTTTCTTGCCAAAGTATGATCCATTTAGAGTTACTTAGATGTGTGCTAAAACCTCCACCAACATTCAAAGGCTTCAGGAATTTGAAAAGCCTTGTTATTTCCCATGTTATCCTGGGCCAAGATGTGTTCCAAAGTCTGATTGCTTGCTGTCCTCTGCTTGAAAGGTTGACTTTGATAGAGTTCGATTTTGCCCATCTCAAGATTGATGCGCCAAATCTCCAATTTCTTGTTGTTGAAGGTTATTTTGGGGATCTTATTTTTGAGAATACCCTAAATCTTATTGATGTGTGCGTTTCTACGGACACCGATGTTGGCCAAATATGGGGTTGTGACAGTTCTAGCAATTTGGTCAAGTTTATGGTTCACCTGCCTCATATTCAAAGGCTACAAATTCAGGGATTCTTTTTACAGGGTGACCAAGAGCGTCAAGCTGCTTTGTCAGAAGTAAACTCTTTATATGGCAACTGGATTTGCCCATTCTCCCAACTACGATTTGTCAAAATATCCAACGTCTCTAATGTCAAAGCTCAATTAGATTTCATCAGATTTCTTCTTTTAAATTCTCCTGTGCTTGAGAAGATTATTGTTAAGCCTGCTTATGCCGATGATTCTTGGGAGCAAGTTAAACAGTTGCTCCGATTAGGGCGTGCCTCAGTGCATTCAGAGATAATCTTCTTGGACCCATCGTTTGAACTTTGGCAGCTAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

723

Amino Acids

83.04

Weight (kDa)

7.09

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 651, 1833
Acc36I ACCTGC 2 cut(s) 651, 1833
AccB1I GGYRCC 1 cut(s) 701
AciI CCGC 1 cut(s) 889
AclWI GGATC 3 cut(s) 295, 1471, 1716
AcoI YGGCCR 2 cut(s) 589, 1771
AcuI CTGAAG 3 cut(s) 340, 603, 1516
AfaI GTAC 4 cut(s) 117, 780, 1293, 1433
AfiI CCNNNNNNNGG 4 cut(s) 405, 598, 888, 1780
AhlI ACTAGT 1 cut(s) 781
AjnI CCWGG 1 cut(s) 1569
AjuI GAANNNNNNNTTGG 2 cut(s) 1686, 1718
AluBI AGCT 7 cut(s) 91, 154, 718, 1018, 1889, 1985, 2161
AluI AGCT 7 cut(s) 91, 154, 718, 1018, 1889, 1985, 2161
Alw21I GWGCWC 2 cut(s) 1020, 1027
Alw26I GTCTC 3 cut(s) 76, 1252, 1975
Alw44I GTGCAC 1 cut(s) 1023
AlwI GGATC 3 cut(s) 295, 1471, 1716
AoxI GGCC 8 cut(s) 133, 396, 589, 788, 823, 1309, 1573, 1771
ApaLI GTGCAC 1 cut(s) 1023
ApeKI GCWGC 2 cut(s) 1889, 2158
ArsI GACNNNNNNTTYG 4 cut(s) 38, 70, 2129, 2161
Asp700I GAANNNNTTC 1 cut(s) 1447
AspA2I CCTAGG 1 cut(s) 121
AspLEI GCGC 1 cut(s) 1669
AspS9I GGNCC 5 cut(s) 134, 397, 1310, 1573, 2137
AsuC2I CCSGG 1 cut(s) 866
AsuHPI GGTGA 6 cut(s) 533, 632, 773, 871, 1814, 1883
AvaII GGWCC 1 cut(s) 2137
AvrII CCTAGG 1 cut(s) 121
BaeGI GKGCMC 1 cut(s) 1027
BaeI ACNNNNGTAYC 2 cut(s) 754, 787
BalI TGGCCA 1 cut(s) 1773
BanI GGYRCC 1 cut(s) 701
BanII GRGCYC 1 cut(s) 1020
BauI CACGAG 1 cut(s) 560
Bbv12I GWGCWC 2 cut(s) 1020, 1027
BbvI GCAGC 1 cut(s) 1876
BccI CCATC 7 cut(s) 161, 189, 346, 591, 1084, 1659, 2149
BciT130I CCWGG 1 cut(s) 1571
BclI TGATCA 2 cut(s) 109, 1285
BcnI CCSGG 1 cut(s) 866
BcoDI GTCTC 3 cut(s) 76, 1252, 1975
BcuI ACTAGT 1 cut(s) 781
BfaI CTAG 6 cut(s) 92, 122, 458, 615, 782, 1797
BfmI CTRYAG 1 cut(s) 1438
BfuAI ACCTGC 2 cut(s) 651, 1833
BisI GCNGC 3 cut(s) 890, 1890, 2159
BlnI CCTAGG 1 cut(s) 121
BlpI GCTNAGC 1 cut(s) 1034
BlsI GCNGC 3 cut(s) 891, 1891, 2160
BmcAI AGTACT 1 cut(s) 780
Bme1390I CCNGG 2 cut(s) 866, 1571
Bme18I GGWCC 1 cut(s) 2137
BmgT120I GGNCC 5 cut(s) 134, 397, 1310, 1573, 2137
BmiI GGNNCC 5 cut(s) 136, 410, 703, 1312, 2139
BmrFI CCNGG 2 cut(s) 866, 1571
BmsI GCATC 3 cut(s) 478, 793, 1654
BpmI CTGGAG 1 cut(s) 1216
Bpu1102I GCTNAGC 1 cut(s) 1034
BpuEI CTTGAG 5 cut(s) 260, 464, 992, 1640, 2051
BpuMI CCSGG 1 cut(s) 866
Bsa29I ATCGAT 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 189
BsaJI CCNNGG 4 cut(s) 121, 393, 766, 1570
BsaXI ACNNNNNCTCC 6 cut(s) 768, 798, 1079, 1109, 2076, 2106
Bsc4I CCNNNNNNNGG 4 cut(s) 405, 598, 888, 1780
Bse1I ACTGG 2 cut(s) 1199, 1928
Bse8I GATNNNNATC 1 cut(s) 189
BseBI CCWGG 1 cut(s) 1571
BseCI ATCGAT 1 cut(s) 193
BseDI CCNNGG 4 cut(s) 121, 393, 766, 1570
BseGI GGATG 3 cut(s) 326, 538, 571
BseJI GATNNNNATC 1 cut(s) 189
BseLI CCNNNNNNNGG 4 cut(s) 405, 598, 888, 1780
BseMII CTCAG 2 cut(s) 1048, 2124
BseNI ACTGG 2 cut(s) 1199, 1928
BseSI GKGCMC 1 cut(s) 1027
BseXI GCAGC 1 cut(s) 1876
BshFI GGCC 8 cut(s) 135, 398, 591, 790, 825, 1311, 1575, 1773
BshNI GGYRCC 1 cut(s) 701
BshVI ATCGAT 1 cut(s) 193
BsiHKAI GWGCWC 2 cut(s) 1020, 1027
BsiSI CCGG 1 cut(s) 865
BslFI GGGAC 1 cut(s) 1057
BslI CCNNNNNNNGG 4 cut(s) 405, 598, 888, 1780
BsmAI GTCTC 3 cut(s) 76, 1252, 1975
BsmBI CGTCTC 1 cut(s) 1975
BsmFI GGGAC 1 cut(s) 1057
BsmI GAATGC 1 cut(s) 2116
BsnI GGCC 8 cut(s) 135, 398, 591, 790, 825, 1311, 1575, 1773
Bsp1286I GDGCHC 2 cut(s) 1020, 1027
Bsp143I GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
Bsp1720I GCTNAGC 1 cut(s) 1034
BspACI CCGC 1 cut(s) 889
BspANI GGCC 8 cut(s) 135, 398, 591, 790, 825, 1311, 1575, 1773
BspCNI CTCAG 2 cut(s) 1047, 2123
BspDI ATCGAT 1 cut(s) 193
BspLI GGNNCC 5 cut(s) 136, 410, 703, 1312, 2139
BspMI ACCTGC 2 cut(s) 651, 1833
BspPI GGATC 3 cut(s) 295, 1471, 1716
BspT107I GGYRCC 1 cut(s) 701
BsrI ACTGG 2 cut(s) 1199, 1928
BssECI CCNNGG 4 cut(s) 121, 393, 766, 1570
BssMI GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
BssSI CACGAG 1 cut(s) 560
BssT1I CCWWGG 2 cut(s) 121, 393
Bst2BI CACGAG 1 cut(s) 560
Bst2UI CCWGG 1 cut(s) 1571
Bst4CI ACNGT 4 cut(s) 767, 1029, 1793, 2088
BstC8I GCNNGC 4 cut(s) 427, 1603, 2052, 2106
BstDEI CTNAG 5 cut(s) 1034, 1297, 1493, 2110, 2162
BstDSI CCRYGG 1 cut(s) 766
BstEII GGTNACC 2 cut(s) 761, 1871
BstF5I GGATG 3 cut(s) 326, 538, 571
BstHHI GCGC 1 cut(s) 1669
BstKTI GATC 7 cut(s) 112, 193, 303, 1240, 1288, 1479, 1711
BstMAI GTCTC 3 cut(s) 76, 1252, 1975
BstMBI GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
BstMWI GCNNNNNNNGC 2 cut(s) 701, 710
BstNI CCWGG 1 cut(s) 1571
BstPI GGTNACC 2 cut(s) 761, 1871
BstSCI CCNGG 2 cut(s) 864, 1569
BstSFI CTRYAG 1 cut(s) 1438
BstSLI GKGCMC 1 cut(s) 1027
BstV1I GCAGC 1 cut(s) 1876
BstX2I RGATCY 1 cut(s) 1708
BstXI CCANNNNNNTGG 1 cut(s) 1356
BstYI RGATCY 1 cut(s) 1708
Bsu15I ATCGAT 1 cut(s) 193
BsuRI GGCC 8 cut(s) 135, 398, 591, 790, 825, 1311, 1575, 1773
BsuTUI ATCGAT 1 cut(s) 193
BtgI CCRYGG 1 cut(s) 766
BtsCI GGATG 3 cut(s) 326, 538, 571
BtsI GCAGTG 1 cut(s) 1173
BtsIMutI CAGTG 2 cut(s) 1173, 2118
BveI ACCTGC 2 cut(s) 651, 1833
Cac8I GCNNGC 4 cut(s) 427, 1603, 2052, 2106
CfoI GCGC 1 cut(s) 1669
Cfr13I GGNCC 5 cut(s) 134, 397, 1310, 1573, 2137
ClaI ATCGAT 1 cut(s) 193
CseI GACGC 1 cut(s) 1871
Csp6I GTAC 4 cut(s) 116, 779, 1292, 1432
CviAII CATG 7 cut(s) 113, 161, 276, 729, 1156, 1289, 1562
CviQI GTAC 4 cut(s) 116, 779, 1292, 1432
DdeI CTNAG 5 cut(s) 1034, 1297, 1493, 2110, 2162
DpnI GATC 7 cut(s) 111, 192, 302, 1239, 1287, 1478, 1710
DpnII GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
DraI TTTAAA 2 cut(s) 957, 2016
EaeI YGGCCR 2 cut(s) 589, 1771
Ecl136II GAGCTC 1 cut(s) 1018
Eco130I CCWWGG 2 cut(s) 121, 393
Eco24I GRGCYC 1 cut(s) 1020
Eco47I GGWCC 1 cut(s) 2137
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 3 cut(s) 340, 603, 1516
Eco91I GGTNACC 2 cut(s) 761, 1871
EcoICRI GAGCTC 1 cut(s) 1018
EcoO65I GGTNACC 2 cut(s) 761, 1871
EcoRI GAATTC 1 cut(s) 1443
EcoRII CCWGG 1 cut(s) 1569
EcoT14I CCWWGG 2 cut(s) 121, 393
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 2 cut(s) 121, 393
Esp3I CGTCTC 1 cut(s) 1975
FaeI CATG 7 cut(s) 116, 164, 279, 732, 1159, 1292, 1565
FalI AAGNNNNNCTT 4 cut(s) 436, 468, 1612, 1644
FaqI GGGAC 1 cut(s) 1057
FatI CATG 7 cut(s) 112, 160, 275, 728, 1155, 1288, 1561
FbaI TGATCA 2 cut(s) 109, 1285
Fnu4HI GCNGC 3 cut(s) 890, 1890, 2159
FokI GGATG 3 cut(s) 333, 545, 578
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 3 cut(s) 890, 1890, 2159
FspBI CTAG 6 cut(s) 92, 122, 458, 615, 782, 1797
GlaI GCGC 1 cut(s) 1668
GluI GCNGC 3 cut(s) 890, 1890, 2159
GsuI CTGGAG 1 cut(s) 1216
HaeIII GGCC 8 cut(s) 135, 398, 591, 790, 825, 1311, 1575, 1773
HapII CCGG 1 cut(s) 865
HgaI GACGC 1 cut(s) 1871
HhaI GCGC 1 cut(s) 1669
Hin1II CATG 7 cut(s) 116, 164, 279, 732, 1159, 1292, 1565
Hin6I GCGC 1 cut(s) 1667
HinP1I GCGC 1 cut(s) 1667
HincII GTYRAC 2 cut(s) 450, 1626
HindII GTYRAC 2 cut(s) 450, 1626
HindIII AAGCTT 2 cut(s) 152, 716
HpaII CCGG 1 cut(s) 865
HphI GGTGA 6 cut(s) 533, 632, 773, 871, 1814, 1883
Hpy166II GTNNAC 8 cut(s) 100, 450, 640, 1025, 1276, 1626, 1822, 1906
Hpy188III TCNNGA 8 cut(s) 213, 293, 358, 481, 1001, 1389, 1534, 1657
Hpy8I GTNNAC 8 cut(s) 100, 450, 640, 1025, 1276, 1626, 1822, 1906
HpyAV CCTTC 4 cut(s) 282, 1002, 1458, 1688
HpyCH4III ACNGT 4 cut(s) 767, 1029, 1793, 2088
HpyCH4IV ACGT 1 cut(s) 1968
HpyCH4V TGCA 4 cut(s) 573, 921, 1025, 2116
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 710
HpyF3I CTNAG 5 cut(s) 1034, 1297, 1493, 2110, 2162
HpySE526I ACGT 1 cut(s) 1968
Hsp92II CATG 7 cut(s) 116, 164, 279, 732, 1159, 1292, 1565
HspAI GCGC 1 cut(s) 1667
Ksp22I TGATCA 2 cut(s) 109, 1285
Kzo9I GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
LmnI GCTCC 5 cut(s) 496, 1015, 1051, 2074, 2097
Lsp1109I GCAGC 1 cut(s) 1876
LweI GCATC 3 cut(s) 478, 793, 1654
MaeI CTAG 6 cut(s) 92, 122, 458, 615, 782, 1797
MaeII ACGT 1 cut(s) 1968
MalI GATC 7 cut(s) 111, 192, 302, 1239, 1287, 1478, 1710
MboI GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
MboII GAAGA 8 cut(s) 194, 606, 987, 988, 1370, 2000, 2047, 2122
MfeI CAATTG 1 cut(s) 1354
MflI RGATCY 1 cut(s) 1708
MhlI GDGCHC 2 cut(s) 1020, 1027
MlsI TGGCCA 1 cut(s) 1773
MluNI TGGCCA 1 cut(s) 1773
MlyI GAGTC 2 cut(s) 845, 1103
MmeI TCCRAC 2 cut(s) 1077, 1989
Mox20I TGGCCA 1 cut(s) 1773
MroXI GAANNNNTTC 1 cut(s) 1447
MscI TGGCCA 1 cut(s) 1773
MseI TTAA 9 cut(s) 150, 554, 897, 956, 987, 1409, 2015, 2046, 2082
MslI CAYNNNNRTG 2 cut(s) 165, 542
Msp20I TGGCCA 1 cut(s) 1773
MspI CCGG 1 cut(s) 865
MspR9I CCNGG 2 cut(s) 866, 1571
MunI CAATTG 1 cut(s) 1354
Mva1269I GAATGC 1 cut(s) 2116
MvaI CCWGG 1 cut(s) 1571
MwoI GCNNNNNNNGC 2 cut(s) 701, 710
NciI CCSGG 1 cut(s) 866
NdeII GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
NlaIII CATG 7 cut(s) 116, 164, 279, 732, 1159, 1292, 1565
NlaIV GGNNCC 5 cut(s) 136, 410, 703, 1312, 2139
NmuCI GTSAC 7 cut(s) 54, 125, 761, 1143, 1301, 1787, 1871
PaqCI CACCTGC 2 cut(s) 651, 1833
PctI GAATGC 1 cut(s) 2116
PdmI GAANNNNTTC 1 cut(s) 1447
PfeI GAWTC 9 cut(s) 199, 244, 578, 675, 797, 1007, 1375, 1857, 2066
PkrI GCNGC 3 cut(s) 891, 1891, 2160
PleI GAGTC 2 cut(s) 844, 1102
PpsI GAGTC 2 cut(s) 844, 1102
Psp124BI GAGCTC 1 cut(s) 1020
Psp6I CCWGG 1 cut(s) 1569
PspEI GGTNACC 2 cut(s) 761, 1871
PspGI CCWGG 1 cut(s) 1569
PspN4I GGNNCC 5 cut(s) 136, 410, 703, 1312, 2139
PspPI GGNCC 5 cut(s) 134, 397, 1310, 1573, 2137
PsuI RGATCY 1 cut(s) 1708
RsaI GTAC 4 cut(s) 117, 780, 1293, 1433
RsaNI GTAC 4 cut(s) 116, 779, 1292, 1432
RseI CAYNNNNRTG 2 cut(s) 165, 542
SacI GAGCTC 1 cut(s) 1020
SaqAI TTAA 9 cut(s) 150, 554, 897, 956, 987, 1409, 2015, 2046, 2082
SatI GCNGC 3 cut(s) 890, 1890, 2159
Sau3AI GATC 7 cut(s) 109, 190, 300, 1237, 1285, 1476, 1708
Sau96I GGNCC 5 cut(s) 134, 397, 1310, 1573, 2137
ScaI AGTACT 1 cut(s) 780
SchI GAGTC 2 cut(s) 845, 1103
ScrFI CCNGG 2 cut(s) 866, 1571
SduI GDGCHC 2 cut(s) 1020, 1027
SfaNI GCATC 3 cut(s) 478, 793, 1654
SfcI CTRYAG 1 cut(s) 1438
SinI GGWCC 1 cut(s) 2137
SmiMI CAYNNNNRTG 2 cut(s) 165, 542
SmlI CTYRAG 5 cut(s) 239, 479, 971, 1655, 2030
SmoI CTYRAG 5 cut(s) 239, 479, 971, 1655, 2030
SpeI ACTAGT 1 cut(s) 781
SsiI CCGC 1 cut(s) 889
SspMI CTAG 6 cut(s) 92, 122, 458, 615, 782, 1797
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 2 cut(s) 864, 1569
StyI CCWWGG 2 cut(s) 121, 393
TaaI ACNGT 4 cut(s) 767, 1029, 1793, 2088
TaiI ACGT 1 cut(s) 1971
TaqI TCGA 3 cut(s) 193, 1339, 1641
TatI WGTACW 3 cut(s) 115, 778, 1291
TauI GCSGC 1 cut(s) 892
TfiI GAWTC 9 cut(s) 199, 244, 578, 675, 797, 1007, 1375, 1857, 2066
Tru1I TTAA 9 cut(s) 150, 554, 897, 956, 987, 1409, 2015, 2046, 2082
Tru9I TTAA 9 cut(s) 150, 554, 897, 956, 987, 1409, 2015, 2046, 2082
TscAI CASTG 2 cut(s) 1173, 2118
TseFI GTSAC 7 cut(s) 54, 125, 761, 1143, 1301, 1787, 1871
TseI GCWGC 2 cut(s) 1889, 2158
Tsp45I GTSAC 7 cut(s) 54, 125, 761, 1143, 1301, 1787, 1871
TspDTI ATGAA 7 cut(s) 194, 223, 264, 928, 1370, 1440, 1987
TspGWI ACGGA 1 cut(s) 1772
TspRI CASTG 2 cut(s) 1173, 2118
VneI GTGCAC 1 cut(s) 1023
VpaK11BI GGWCC 1 cut(s) 2137
XmaJI CCTAGG 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 1447
XspI CTAG 6 cut(s) 92, 122, 458, 615, 782, 1797
ZrmI AGTACT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.