Rorug06G0029300

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000103
Physical Location & Seq
Reverse (-)
3461539 .. 3466674
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0029300.1

Sequence Viewer

Length: 960 bp
ATGGCCAAGGTGGAACTTCGAGAACTGGGTAACACAGGGCTCAAGCTCAGCTGCGTTGGCTTCGGCGCTTCCCCTCTCGGCAACGTTTTCGGCCCAGTCTCCGACGAAGAAGCCATCGGCTCCGTTCGCGAAGCTTTTAGCCGAGGCATCAACTTCTTCGACACCTCTCCGTACTATGGAGGGACATTGTCGGAGAAGGTGCTTGGTAAAACACTAAAGGCTCTAGGAGTTCCGAGGAGTGAGTATATTGTGGCAACAAAGTGCGGACGATATGCTGAAGGTTTCGATTTCAGTGCTGATAGAGTGACTAAGAGCATTGATGAGAGCTTGGAGAGGTTGCAGCTAGATTACGTTGATATATTGCAATGCCATGACATTGAATTTGGGAATCTCGATCAGATTGTCAATGAGACAATTCCTGCTCTACAGAAACTGAAAGAAGCAGGGAAGATCCGTTTCATTGGTATCACGGGACTTCCTTTGCGAGTTTTCACATATGTTCTTGACCGGGTACCACCTGGCACAGTGGATGTTGTTCTGTCATATTGCCATTACAGTATTAATGATTCAGCACTGGAGGATTTACTGCCTTACCTGAAGAGCAAAGGTGTTGGCGTAATTAGTGCTTCTCCACTTGCAATGGGGCTTCTCACTGAGCGTGGTCCTCCAGAATGGCATCCAGCATCTCCTGAACTCAAGTCTACTTGTCAAGCTGCTGCTTTGTATTGTAAAGAGAGAGGGAAGAATATTTCAAAGTTAGCTATGCAATACAGCTTGTCCAATAAGGATATCTCATCAGTGCTGGTTGGCATGAACTCTATTAAACAGGTAGAGGAAAATGTTGCTGCTGCTGTGGAGCTTTCAACTGTTGGGAAAGATGAGCAAACCATATCAGAGGTTGAAGCTATTCTGAAACCTGTCAAGAATCAGACTTGGCCTAGTGGAATCCAGCAGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

319

Amino Acids

34.64

Weight (kDa)

5.33

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 19 - 288 3e-57 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 511
AccB1I GGYRCC 1 cut(s) 511
AccI GTMKAC 1 cut(s) 701
AccII CGCG 1 cut(s) 129
AciI CCGC 1 cut(s) 264
AclI AACGTT 1 cut(s) 84
AclWI GGATC 1 cut(s) 445
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 380
AcuI CTGAAG 2 cut(s) 297, 617
AfaI GTAC 2 cut(s) 173, 513
AfiI CCNNNNNNNGG 1 cut(s) 176
AgsI TTSAA 4 cut(s) 380, 753, 864, 902
AjnI CCWGG 1 cut(s) 517
Alw26I GTCTC 2 cut(s) 103, 404
AlwI GGATC 1 cut(s) 445
AlwNI CAGNNNCTG 1 cut(s) 433
AoxI GGCC 3 cut(s) 3, 91, 935
ApeKI GCWGC 6 cut(s) 51, 340, 713, 716, 845, 848
ApoI RAATTY 1 cut(s) 380
ArsI GACNNNNNNTTYG 2 cut(s) 365, 397
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 906
Asp718I GGTACC 1 cut(s) 511
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 2 cut(s) 92, 662
AsuC2I CCSGG 1 cut(s) 509
AvaII GGWCC 1 cut(s) 662
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 1 cut(s) 42
BbvI GCAGC 6 cut(s) 38, 352, 700, 703, 832, 835
BccI CCATC 1 cut(s) 122
BcgI CGANNNNNNTGC 4 cut(s) 70, 104, 275, 309
BciT130I CCWGG 1 cut(s) 519
BcnI CCSGG 1 cut(s) 509
BcoDI GTCTC 2 cut(s) 103, 404
BfaI CTAG 3 cut(s) 224, 344, 939
BfmI CTRYAG 1 cut(s) 425
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 6 cut(s) 52, 341, 714, 717, 846, 849
BlpI GCTNAGC 1 cut(s) 47
BlsI GCNGC 6 cut(s) 53, 342, 715, 718, 847, 850
Bme1390I CCNGG 2 cut(s) 509, 519
Bme18I GGWCC 1 cut(s) 662
BmgT120I GGNCC 2 cut(s) 92, 662
BmiI GGNNCC 2 cut(s) 121, 513
BmrFI CCNGG 2 cut(s) 509, 519
BmrI ACTGGG 2 cut(s) 35, 89
BmsI GCATC 3 cut(s) 156, 685, 692
BmuI ACTGGG 2 cut(s) 35, 89
BpmI CTGGAG 2 cut(s) 596, 651
Bpu1102I GCTNAGC 1 cut(s) 47
BpuEI CTTGAG 2 cut(s) 26, 680
BpuMI CCSGG 1 cut(s) 509
BsaJI CCNNGG 3 cut(s) 6, 142, 233
Bsc4I CCNNNNNNNGG 1 cut(s) 176
Bse1I ACTGG 3 cut(s) 30, 95, 579
Bse3DI GCAATG 2 cut(s) 371, 645
BseBI CCWGG 1 cut(s) 519
BseDI CCNNGG 3 cut(s) 6, 142, 233
BseGI GGATG 2 cut(s) 535, 676
BseLI CCNNNNNNNGG 1 cut(s) 176
BseMI GCAATG 2 cut(s) 371, 645
BseMII CTCAG 2 cut(s) 61, 645
BseNI ACTGG 3 cut(s) 30, 95, 579
BseRI GAGGAG 1 cut(s) 250
BseXI GCAGC 6 cut(s) 38, 352, 700, 703, 832, 835
Bsh1236I CGCG 1 cut(s) 129
BshFI GGCC 3 cut(s) 5, 93, 937
BshNI GGYRCC 1 cut(s) 511
BsiSI CCGG 1 cut(s) 508
BslFI GGGAC 2 cut(s) 196, 486
BslI CCNNNNNNNGG 1 cut(s) 176
BsmAI GTCTC 2 cut(s) 103, 404
BsmFI GGGAC 2 cut(s) 196, 486
BsnI GGCC 3 cut(s) 5, 93, 937
Bsp1286I GDGCHC 1 cut(s) 42
Bsp143I GATC 2 cut(s) 394, 450
Bsp1720I GCTNAGC 1 cut(s) 47
Bsp68I TCGCGA 1 cut(s) 129
BspACI CCGC 1 cut(s) 264
BspANI GGCC 3 cut(s) 5, 93, 937
BspCNI CTCAG 2 cut(s) 60, 646
BspFNI CGCG 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 121, 513
BspPI GGATC 1 cut(s) 445
BspQI GCTCTTC 1 cut(s) 593
BspT107I GGYRCC 1 cut(s) 511
BsrDI GCAATG 2 cut(s) 371, 645
BsrI ACTGG 3 cut(s) 30, 95, 579
BssECI CCNNGG 3 cut(s) 6, 142, 233
BssMI GATC 2 cut(s) 394, 450
BssT1I CCWWGG 1 cut(s) 6
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 3 cut(s) 526, 557, 868
Bst6I CTCTTC 1 cut(s) 593
BstDEI CTNAG 3 cut(s) 47, 309, 654
BstF5I GGATG 2 cut(s) 535, 676
BstFNI CGCG 1 cut(s) 129
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 2 cut(s) 397, 453
BstMAI GTCTC 2 cut(s) 103, 404
BstMBI GATC 2 cut(s) 394, 450
BstMWI GCNNNNNNNGC 2 cut(s) 57, 126
BstNI CCWGG 1 cut(s) 519
BstSCI CCNGG 2 cut(s) 507, 517
BstSFI CTRYAG 1 cut(s) 425
BstUI CGCG 1 cut(s) 129
BstV1I GCAGC 6 cut(s) 38, 352, 700, 703, 832, 835
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BsuRI GGCC 3 cut(s) 5, 93, 937
BtsCI GGATG 2 cut(s) 535, 676
BtsIMutI CAGTG 5 cut(s) 298, 531, 572, 651, 804
BtuMI TCGCGA 1 cut(s) 129
CaiI CAGNNNCTG 1 cut(s) 433
CfoI GCGC 1 cut(s) 68
Cfr13I GGNCC 2 cut(s) 92, 662
Csp6I GTAC 2 cut(s) 172, 512
CviAII CATG 2 cut(s) 371, 811
CviQI GTAC 2 cut(s) 172, 512
DdeI CTNAG 3 cut(s) 47, 309, 654
DpnI GATC 2 cut(s) 396, 452
DpnII GATC 2 cut(s) 394, 450
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 593
EarI CTCTTC 1 cut(s) 593
Eco130I CCWWGG 1 cut(s) 6
Eco24I GRGCYC 1 cut(s) 42
Eco32I GATATC 1 cut(s) 790
Eco47I GGWCC 1 cut(s) 662
Eco57I CTGAAG 2 cut(s) 297, 617
EcoRII CCWGG 1 cut(s) 517
EcoRV GATATC 1 cut(s) 790
EcoT14I CCWWGG 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 2 cut(s) 374, 814
FaqI GGGAC 2 cut(s) 196, 486
FatI CATG 2 cut(s) 370, 810
FauNDI CATATG 1 cut(s) 496
FblI GTMKAC 1 cut(s) 701
Fnu4HI GCNGC 6 cut(s) 52, 341, 714, 717, 846, 849
FokI GGATG 2 cut(s) 542, 663
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 6 cut(s) 52, 341, 714, 717, 846, 849
FspBI CTAG 3 cut(s) 224, 344, 939
GlaI GCGC 1 cut(s) 67
GluI GCNGC 6 cut(s) 52, 341, 714, 717, 846, 849
GsuI CTGGAG 2 cut(s) 596, 651
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 3 cut(s) 5, 93, 937
HapII CCGG 1 cut(s) 508
HhaI GCGC 1 cut(s) 68
Hin1II CATG 2 cut(s) 374, 814
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HindIII AAGCTT 1 cut(s) 132
HinfI GANTC 4 cut(s) 388, 566, 925, 945
HpaII CCGG 1 cut(s) 508
Hpy166II GTNNAC 1 cut(s) 702
Hpy188I TCNGA 7 cut(s) 103, 193, 234, 399, 895, 912, 930
Hpy188III TCNNGA 7 cut(s) 20, 128, 392, 503, 668, 689, 922
Hpy8I GTNNAC 1 cut(s) 702
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 2 cut(s) 190, 272
HpyCH4III ACNGT 3 cut(s) 526, 557, 868
HpyCH4IV ACGT 2 cut(s) 84, 351
HpyCH4V TGCA 4 cut(s) 340, 364, 638, 766
HpyF10VI GCNNNNNNNGC 2 cut(s) 57, 126
HpyF3I CTNAG 3 cut(s) 47, 309, 654
HpySE526I ACGT 2 cut(s) 84, 351
Hsp92II CATG 2 cut(s) 374, 814
HspAI GCGC 1 cut(s) 66
KpnI GGTACC 1 cut(s) 515
Kzo9I GATC 2 cut(s) 394, 450
LguI GCTCTTC 1 cut(s) 593
LmnI GCTCC 2 cut(s) 125, 856
Lsp1109I GCAGC 6 cut(s) 38, 352, 700, 703, 832, 835
LweI GCATC 3 cut(s) 156, 685, 692
MaeI CTAG 3 cut(s) 224, 344, 939
MaeII ACGT 2 cut(s) 84, 351
MaeIII GTNAC 2 cut(s) 29, 304
MalI GATC 2 cut(s) 396, 452
MboI GATC 2 cut(s) 394, 450
MboII GAAGA 5 cut(s) 119, 148, 460, 610, 754
MflI RGATCY 1 cut(s) 450
MhlI GDGCHC 1 cut(s) 42
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 380, 414, 618
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 2 cut(s) 126, 171
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 906
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 561, 822
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 51
MspI CCGG 1 cut(s) 508
MspR9I CCNGG 2 cut(s) 509, 519
MvaI CCWGG 1 cut(s) 519
MvnI CGCG 1 cut(s) 129
MwoI GCNNNNNNNGC 2 cut(s) 57, 126
NciI CCSGG 1 cut(s) 509
NdeI CATATG 1 cut(s) 496
NdeII GATC 2 cut(s) 394, 450
NlaIII CATG 2 cut(s) 374, 814
NlaIV GGNNCC 2 cut(s) 121, 513
NmeAIII GCCGAG 2 cut(s) 57, 167
NmuCI GTSAC 1 cut(s) 304
NruI TCGCGA 1 cut(s) 129
PciSI GCTCTTC 1 cut(s) 593
PdmI GAANNNNTTC 1 cut(s) 906
PfeI GAWTC 4 cut(s) 388, 566, 925, 945
PflFI GACNNNGTC 1 cut(s) 187
PkrI GCNGC 6 cut(s) 53, 342, 715, 718, 847, 850
PshBI ATTAAT 1 cut(s) 561
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 1 cut(s) 517
PspGI CCWGG 1 cut(s) 517
PspN4I GGNNCC 2 cut(s) 121, 513
PspPI GGNCC 2 cut(s) 92, 662
PstNI CAGNNNCTG 1 cut(s) 433
PsuI RGATCY 1 cut(s) 450
PsyI GACNNNGTC 1 cut(s) 187
PvuII CAGCTG 1 cut(s) 51
RruI TCGCGA 1 cut(s) 129
RsaI GTAC 2 cut(s) 173, 513
RsaNI GTAC 2 cut(s) 172, 512
SapI GCTCTTC 1 cut(s) 593
SaqAI TTAA 2 cut(s) 561, 822
SatI GCNGC 6 cut(s) 52, 341, 714, 717, 846, 849
Sau3AI GATC 2 cut(s) 394, 450
Sau96I GGNCC 2 cut(s) 92, 662
ScrFI CCNGG 2 cut(s) 509, 519
SduI GDGCHC 1 cut(s) 42
SfaNI GCATC 3 cut(s) 156, 685, 692
SfcI CTRYAG 1 cut(s) 425
SinI GGWCC 1 cut(s) 662
SmlI CTYRAG 2 cut(s) 41, 695
SmoI CTYRAG 2 cut(s) 41, 695
Sse9I AATT 3 cut(s) 380, 414, 618
SsiI CCGC 1 cut(s) 264
SspI AATATT 1 cut(s) 748
SspMI CTAG 3 cut(s) 224, 344, 939
StyD4I CCNGG 2 cut(s) 507, 517
StyI CCWWGG 1 cut(s) 6
TaaI ACNGT 3 cut(s) 526, 557, 868
TaiI ACGT 2 cut(s) 87, 354
TaqI TCGA 4 cut(s) 19, 159, 285, 393
TasI AATT 3 cut(s) 380, 414, 618
TfiI GAWTC 4 cut(s) 388, 566, 925, 945
Tru1I TTAA 2 cut(s) 561, 822
Tru9I TTAA 2 cut(s) 561, 822
TscAI CASTG 5 cut(s) 298, 531, 579, 658, 804
TseFI GTSAC 1 cut(s) 304
TseI GCWGC 6 cut(s) 51, 340, 713, 716, 845, 848
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 2 cut(s) 448, 827
TspGWI ACGGA 3 cut(s) 112, 159, 443
TspRI CASTG 5 cut(s) 298, 531, 579, 658, 804
Tth111I GACNNNGTC 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 662
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 1 cut(s) 380
XmiI GTMKAC 1 cut(s) 701
XmnI GAANNNNTTC 1 cut(s) 906
XspI CTAG 3 cut(s) 224, 344, 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.