Rh6AG049900

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000103
Physical Location & Seq
Reverse (-)
7216741 .. 7218015
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG049900.1

Sequence Viewer

Length: 1086 bp
ATGATTGATCGTGTGCTCTTACTTCATCTTGTCCCCATACGCAAGTTCAAGCTAGCCTGTACTATGGATGAGGTAGCCACTAGAGATATTGATCGATGGATGACCCATCTATCAAGAAACTCTATCAAAGAGTTGATAATTAAGCTTTGGCTAGACCATGAATACAACATTCCATTCTCTCTGTTTTCATGTCAAGGTCTTGTTCACTTGGAGTTACTCGACTGTTTGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGCTTGAAGAATCTTCAACTCCTTCATGTCGACATGGCCCAAGATGTGTTTGAAAATTTGATTCGTTGCAGTTCTCTGCTCGAGAGATTAACATTGCTACGTTTTGACGGTGTCACCAGTCTCAAAATTGATGCACCCAATCTCCAATATTTGCACGTTTTAGGTGAGTTTGATGTCGTTAGCCTTGACAGTGCCTCAAGTATTACTGAGGCTGAAATTTGGATGGGCATCGGTAATGACGAAATAGGAGTTCCAGCCAGTTGGATTCCTGCCTGCAGTTCTAGCAATTTGCTCATGATCTTTGATCACTTACCTCATATTCGAAGACTTGAAATTAAGAGACGCTTTTTAGAGTATTTGTCTCTGGGCGCCTTGCCAGAAAAGCTCACTAAACCATGTCAACATCTGAAGGCTCTTTCTATAGACATTTGCTTCGATGATCCGGATGCAATTCCAACTGCTCTATGCCTTCTGACAAGCTCCCCTGCTCTACAAGAACTAGAAATTGAGGTGGATCCGAGAGAGAAACTCCCAAGGATACACTCTATTGTCGAAGAAGTGAATTCTCCTTGTGTAAATGACAACTACCATTGCACATTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTGTACTTTTAAGTTCACCTGTGCTTGAGAGAATGACTGTCACGCCTTGTAGATTTCCCGAGCCTTCTTATGTGGATGGTTTTCCGAAACTAGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAGCATGCAGAGATAATTCTCCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

361

Amino Acids

41.22

Weight (kDa)

5.67

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 14 - 323 1.5e-21 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 30 - 256 3.5e-17 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 285 - 322 4e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 629
AccI GTMKAC 1 cut(s) 291
AccIII TCCGGA 1 cut(s) 703
AclWI GGATC 3 cut(s) 695, 770, 783
AcsI RAATTY 3 cut(s) 316, 477, 823
AcuI CTGAAG 1 cut(s) 689
AcyI GRCGYC 1 cut(s) 630
AfaI GTAC 2 cut(s) 61, 933
AgsI TTSAA 7 cut(s) 49, 250, 259, 268, 278, 314, 593
AhlI ACTAGT 1 cut(s) 1018
AjnI CCWGG 1 cut(s) 1074
AluBI AGCT 7 cut(s) 52, 145, 264, 646, 741, 908, 1030
AluI AGCT 7 cut(s) 52, 145, 264, 646, 741, 908, 1030
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 3 cut(s) 386, 595, 627
AlwI GGATC 3 cut(s) 695, 770, 783
Ama87I CYCGRG 2 cut(s) 341, 986
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 1 cut(s) 297
ApoI RAATTY 3 cut(s) 316, 477, 823
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
AspLEI GCGC 1 cut(s) 632
AspS9I GGNCC 2 cut(s) 298, 1078
AsuHPI GGTGA 3 cut(s) 367, 437, 936
AsuII TTCGAA 1 cut(s) 583
AsuNHI GCTAGC 1 cut(s) 52
AvaI CYCGRG 2 cut(s) 341, 986
AvaII GGWCC 1 cut(s) 1078
BamHI GGATCC 1 cut(s) 775
BanI GGYRCC 1 cut(s) 629
BbsI GAAGAC 1 cut(s) 592
Bbv12I GWGCWC 1 cut(s) 18
BccI CCATC 4 cut(s) 90, 114, 478, 998
BciT130I CCWGG 1 cut(s) 1076
BciVI GTATCC 1 cut(s) 792
BclI TGATCA 1 cut(s) 565
BcoDI GTCTC 3 cut(s) 386, 595, 627
BcuI ACTAGT 1 cut(s) 1018
BfaI CTAG 7 cut(s) 53, 81, 152, 543, 761, 914, 1019
BfmI CTRYAG 2 cut(s) 535, 681
BfoI RGCGCY 1 cut(s) 633
BfuI GTATCC 1 cut(s) 792
BglII AGATCT 1 cut(s) 891
Bme1390I CCNGG 1 cut(s) 1076
Bme18I GGWCC 1 cut(s) 1078
BmeT110I CYCGRG 2 cut(s) 341, 986
BmgT120I GGNCC 2 cut(s) 298, 1078
BmiI GGNNCC 3 cut(s) 631, 777, 1080
BmrFI CCNGG 1 cut(s) 1076
BmsI GCATC 3 cut(s) 382, 498, 697
BmtI GCTAGC 1 cut(s) 56
BpiI GAAGAC 1 cut(s) 592
BplI GAGNNNNNCTC 2 cut(s) 774, 806
BpmI CTGGAG 1 cut(s) 1019
Bpu14I TTCGAA 1 cut(s) 583
BpuEI CTTGAG 2 cut(s) 442, 974
Bsa29I ATCGAT 1 cut(s) 94
BsaBI GATNNNNATC 2 cut(s) 90, 488
BsaHI GRCGYC 1 cut(s) 630
BsaJI CCNNGG 1 cut(s) 794
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 2 cut(s) 387, 417
Bse1I ACTGG 3 cut(s) 378, 519, 1036
Bse3DI GCAATG 2 cut(s) 353, 850
Bse8I GATNNNNATC 2 cut(s) 90, 488
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 1 cut(s) 1076
BseCI ATCGAT 1 cut(s) 94
BseDI CCNNGG 1 cut(s) 794
BseGI GGATG 5 cut(s) 73, 105, 489, 712, 1009
BseJI GATNNNNATC 2 cut(s) 90, 488
BseMI GCAATG 2 cut(s) 353, 850
BseMII CTCAG 2 cut(s) 459, 879
BseNI ACTGG 3 cut(s) 378, 519, 1036
BshFI GGCC 1 cut(s) 299
BshNI GGYRCC 1 cut(s) 629
BshVI ATCGAT 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 18
BsiHKCI CYCGRG 2 cut(s) 341, 986
BsiSI CCGG 1 cut(s) 704
BslFI GGGAC 1 cut(s) 17
BsmAI GTCTC 3 cut(s) 386, 595, 627
BsmBI CGTCTC 1 cut(s) 595
BsmFI GGGAC 1 cut(s) 17
BsnI GGCC 1 cut(s) 299
BsoBI CYCGRG 2 cut(s) 341, 986
Bsp119I TTCGAA 1 cut(s) 583
Bsp1286I GDGCHC 1 cut(s) 18
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
BspANI GGCC 1 cut(s) 299
BspCNI CTCAG 2 cut(s) 460, 880
BspDI ATCGAT 1 cut(s) 94
BspEI TCCGGA 1 cut(s) 703
BspHI TCATGA 1 cut(s) 555
BspLI GGNNCC 3 cut(s) 631, 777, 1080
BspMAI CTGCAG 1 cut(s) 539
BspOI GCTAGC 1 cut(s) 56
BspPI GGATC 3 cut(s) 695, 770, 783
BspT104I TTCGAA 1 cut(s) 583
BspT107I GGYRCC 1 cut(s) 629
BsrDI GCAATG 2 cut(s) 353, 850
BsrI ACTGG 3 cut(s) 378, 519, 1036
BssECI CCNNGG 1 cut(s) 794
BssMI GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
BssNI GRCGYC 1 cut(s) 630
BssT1I CCWWGG 1 cut(s) 794
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 4 cut(s) 224, 371, 452, 967
BstACI GRCGYC 1 cut(s) 630
BstBI TTCGAA 1 cut(s) 583
BstC8I GCNNGC 3 cut(s) 54, 535, 1059
BstDEI CTNAG 2 cut(s) 468, 888
BstF5I GGATG 5 cut(s) 73, 105, 489, 712, 1009
BstH2I RGCGCY 1 cut(s) 633
BstHHI GCGC 1 cut(s) 632
BstKTI GATC 7 cut(s) 10, 94, 561, 568, 703, 778, 894
BstMAI GTCTC 3 cut(s) 386, 595, 627
BstMBI GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
BstMWI GCNNNNNNNGC 2 cut(s) 543, 643
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 1 cut(s) 1061
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 2 cut(s) 535, 681
BstV2I GAAGAC 1 cut(s) 592
BstX2I RGATCY 2 cut(s) 775, 891
BstXI CCANNNNNNTGG 1 cut(s) 522
BstYI RGATCY 2 cut(s) 775, 891
Bsu15I ATCGAT 1 cut(s) 94
BsuI GTATCC 1 cut(s) 792
BsuRI GGCC 1 cut(s) 299
BsuTUI ATCGAT 1 cut(s) 94
BtsCI GGATG 5 cut(s) 73, 105, 489, 712, 1009
BtsIMutI CAGTG 1 cut(s) 457
Cac8I GCNNGC 3 cut(s) 54, 535, 1059
CciI TCATGA 1 cut(s) 555
CfoI GCGC 1 cut(s) 632
Cfr13I GGNCC 2 cut(s) 298, 1078
ClaI ATCGAT 1 cut(s) 94
CseI GACGC 1 cut(s) 612
Csp6I GTAC 2 cut(s) 60, 932
CviAII CATG 7 cut(s) 158, 189, 287, 295, 556, 657, 1058
CviQI GTAC 2 cut(s) 60, 932
DdeI CTNAG 2 cut(s) 468, 888
DinI GGCGCC 1 cut(s) 631
DpnI GATC 7 cut(s) 9, 93, 560, 567, 702, 777, 893
DpnII GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
DraI TTTAAA 1 cut(s) 1042
Eco130I CCWWGG 1 cut(s) 794
Eco47I GGWCC 1 cut(s) 1078
Eco57I CTGAAG 1 cut(s) 689
Eco88I CYCGRG 2 cut(s) 341, 986
EcoRI GAATTC 1 cut(s) 823
EcoRII CCWGG 1 cut(s) 1074
EcoT14I CCWWGG 1 cut(s) 794
EgeI GGCGCC 1 cut(s) 631
EheI GGCGCC 1 cut(s) 631
ErhI CCWWGG 1 cut(s) 794
Esp3I CGTCTC 1 cut(s) 595
FaeI CATG 7 cut(s) 161, 192, 290, 298, 559, 660, 1061
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FaqI GGGAC 1 cut(s) 17
FatI CATG 7 cut(s) 157, 188, 286, 294, 555, 656, 1057
FbaI TGATCA 1 cut(s) 565
FblI GTMKAC 1 cut(s) 291
FokI GGATG 5 cut(s) 80, 112, 496, 719, 1016
FspBI CTAG 7 cut(s) 53, 81, 152, 543, 761, 914, 1019
GlaI GCGC 1 cut(s) 631
GsuI CTGGAG 1 cut(s) 1019
HaeII RGCGCY 1 cut(s) 633
HaeIII GGCC 1 cut(s) 299
HapII CCGG 1 cut(s) 704
HgaI GACGC 1 cut(s) 612
HhaI GCGC 1 cut(s) 632
Hin1I GRCGYC 1 cut(s) 630
Hin1II CATG 7 cut(s) 161, 192, 290, 298, 559, 660, 1061
Hin6I GCGC 1 cut(s) 630
HinP1I GCGC 1 cut(s) 630
HincII GTYRAC 3 cut(s) 243, 292, 662
HindII GTYRAC 3 cut(s) 243, 292, 662
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 4 cut(s) 271, 322, 526, 1049
HpaII CCGG 1 cut(s) 704
HphI GGTGA 3 cut(s) 367, 437, 936
Hpy166II GTNNAC 5 cut(s) 205, 243, 292, 662, 944
Hpy188I TCNGA 5 cut(s) 669, 735, 780, 926, 1014
Hpy188III TCNNGA 6 cut(s) 114, 259, 343, 556, 704, 986
Hpy8I GTNNAC 5 cut(s) 205, 243, 292, 662, 944
HpyAV CCTTC 4 cut(s) 293, 664, 740, 1002
HpyCH4III ACNGT 4 cut(s) 224, 371, 452, 967
HpyCH4IV ACGT 3 cut(s) 361, 417, 1045
HpyCH4V TGCA 7 cut(s) 330, 395, 415, 537, 710, 855, 1061
HpyF10VI GCNNNNNNNGC 2 cut(s) 543, 643
HpyF3I CTNAG 2 cut(s) 468, 888
HpySE526I ACGT 3 cut(s) 361, 417, 1045
Hsp92I GRCGYC 1 cut(s) 630
Hsp92II CATG 7 cut(s) 161, 192, 290, 298, 559, 660, 1061
HspAI GCGC 1 cut(s) 630
KasI GGCGCC 1 cut(s) 629
Kpn2I TCCGGA 1 cut(s) 703
Ksp22I TGATCA 1 cut(s) 565
Kzo9I GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
LmnI GCTCC 1 cut(s) 746
LweI GCATC 3 cut(s) 382, 498, 697
MaeI CTAG 7 cut(s) 53, 81, 152, 543, 761, 914, 1019
MaeII ACGT 3 cut(s) 361, 417, 1045
MaeIII GTNAC 3 cut(s) 213, 373, 967
MalI GATC 7 cut(s) 9, 93, 560, 567, 702, 777, 893
MboI GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
MboII GAAGA 4 cut(s) 266, 280, 597, 827
MflI RGATCY 2 cut(s) 775, 891
MhlI GDGCHC 1 cut(s) 18
Mly113I GGCGCC 1 cut(s) 630
MmeI TCCRAC 2 cut(s) 503, 740
MnlI CCTC 6 cut(s) 64, 246, 463, 466, 585, 763
MroI TCCGGA 1 cut(s) 703
MseI TTAA 6 cut(s) 141, 350, 597, 903, 938, 1041
MspI CCGG 1 cut(s) 704
MspR9I CCNGG 1 cut(s) 1076
MssI GTTTAAAC 1 cut(s) 1042
MvaI CCWGG 1 cut(s) 1076
MwoI GCNNNNNNNGC 2 cut(s) 543, 643
NarI GGCGCC 1 cut(s) 630
NdeII GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
NheI GCTAGC 1 cut(s) 52
NlaIII CATG 7 cut(s) 161, 192, 290, 298, 559, 660, 1061
NlaIV GGNNCC 3 cut(s) 631, 777, 1080
NmuCI GTSAC 2 cut(s) 373, 967
NspI RCATGY 1 cut(s) 1061
NspV TTCGAA 1 cut(s) 583
PaeI GCATGC 1 cut(s) 1061
PaeR7I CTCGAG 1 cut(s) 341
PagI TCATGA 1 cut(s) 555
PcsI WCGNNNNNNNCGW 1 cut(s) 498
PfeI GAWTC 4 cut(s) 271, 322, 526, 1049
PflFI GACNNNGTC 1 cut(s) 371
PfoI TCCNGGA 1 cut(s) 1074
PluTI GGCGCC 1 cut(s) 633
PmeI GTTTAAAC 1 cut(s) 1042
Psp6I CCWGG 1 cut(s) 1074
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 3 cut(s) 631, 777, 1080
PspPI GGNCC 2 cut(s) 298, 1078
PstI CTGCAG 1 cut(s) 539
PsuI RGATCY 2 cut(s) 775, 891
PsyI GACNNNGTC 1 cut(s) 371
RsaI GTAC 2 cut(s) 61, 933
RsaNI GTAC 2 cut(s) 60, 932
SalI GTCGAC 1 cut(s) 290
SaqAI TTAA 6 cut(s) 141, 350, 597, 903, 938, 1041
Sau3AI GATC 7 cut(s) 7, 91, 558, 565, 700, 775, 891
Sau96I GGNCC 2 cut(s) 298, 1078
ScrFI CCNGG 1 cut(s) 1076
SduI GDGCHC 1 cut(s) 18
SfaNI GCATC 3 cut(s) 382, 498, 697
SfcI CTRYAG 2 cut(s) 535, 681
SfoI GGCGCC 1 cut(s) 631
Sfr274I CTCGAG 1 cut(s) 341
SfuI TTCGAA 1 cut(s) 583
SinI GGWCC 1 cut(s) 1078
SlaI CTCGAG 1 cut(s) 341
SmlI CTYRAG 3 cut(s) 341, 457, 953
SmoI CTYRAG 3 cut(s) 341, 457, 953
SpeI ACTAGT 1 cut(s) 1018
SphI GCATGC 1 cut(s) 1061
SspDI GGCGCC 1 cut(s) 629
SspI AATATT 1 cut(s) 410
SspMI CTAG 7 cut(s) 53, 81, 152, 543, 761, 914, 1019
StyD4I CCNGG 1 cut(s) 1074
StyI CCWWGG 1 cut(s) 794
TaaI ACNGT 4 cut(s) 224, 371, 452, 967
TaiI ACGT 3 cut(s) 364, 420, 1048
TaqI TCGA 7 cut(s) 94, 219, 291, 342, 583, 696, 813
TatI WGTACW 2 cut(s) 59, 931
TfiI GAWTC 4 cut(s) 271, 322, 526, 1049
Tru1I TTAA 6 cut(s) 141, 350, 597, 903, 938, 1041
Tru9I TTAA 6 cut(s) 141, 350, 597, 903, 938, 1041
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 2 cut(s) 373, 967
Tsp45I GTSAC 2 cut(s) 373, 967
TspDTI ATGAA 5 cut(s) 14, 174, 177, 275, 910
TspGWI ACGGA 1 cut(s) 228
TspRI CASTG 1 cut(s) 457
Tth111I GACNNNGTC 1 cut(s) 371
VpaK11BI GGWCC 1 cut(s) 1078
XapI RAATTY 3 cut(s) 316, 477, 823
XceI RCATGY 1 cut(s) 1061
XhoI CTCGAG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 291
XspI CTAG 7 cut(s) 53, 81, 152, 543, 761, 914, 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.