pycom05g10100

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000103
Physical Location & Seq
Forward (+)
13483161 .. 13484619
1459 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10100.1

Sequence Viewer

Length: 1227 bp
ATGGAGTTGGATAGAATTAGCAACCTACCAAGTGATGCAATCGATCGAATTTTGTCATGTTTGCCCATTAAAGAGGCTGTGAAGACAAGTGTCTTATCAAGCAAGTGGAGGTACAAAACGGCTTTGCTTACACACCTCGTGTTTGATAATCAGTGCTTCTCGACTCAAAAGCACATAACTTTTCAGAACATTGTTGATCAAGTACTCTTACTTCATATTGGCCCCATACACAGCTTAAGGTTTTCCCTTATACGTCCTCTAGCTGCTGCTGCTCTTGATCGATGGATTCTTCATCTGTCAAGAAACTCAATTAAAGAGTTAATACTTGAGTTTTGGGAAATTGATGTTTGCTATAATTTGCCTTCATGTTTGTTTTCATGTCAAGATTTGGTTTGTTTGGAGATACGTAATTGTTTGCTAAAGCCTCCTCCCACCTTCAAAGGCTTCAGGAGTTTGAAGAGCCTTTCTATTGGTATGGTTACCATGGCTCAAGGCGTGTTTGATAATCTGATCGTTTCATGTCCTCTTCTTGAGAGATTGATTGTGAGCCTATGTGATGGTTTTACCCACCTCAATGTTGACGCACCAAATCTCCAATACTTTGCGTTTGGAGGCTCTTTTGAGACTGTTAATCTTGAGAATACGCTAAATCTTGTTGAAGTTGACATTGATTTTTGCGATGAGGACCTTAGATGGGTTTCTCACAGCTCTAGCCATTTGGTCAAGTTTCTTGATCGCCTGCCCTGTATTCAGAGGCTCACAATTCAGAGTAGCTTTTTAGAGTATTTGGCTGTTGGTGCCTTGCCCCAAAAGCTTCCCCAACCTTGTCTATATCTGAGGTTTCTTTCTATAACCATTGACTTCCGCCATCTGAATGAAGTTTTAACTGTTCAATGCCTTCTAAGAAGCTCCCCTGCTCTACAAGTACTCGAAGTTCGAGCCTCTGGTTATGGCATGGCTGCTGTGCAAGAAGTGAAGTCTTGGTTTGATGACAACCAGAACTTCCAATTTAGCCAACTGAAACGTGTGAAAATAACCGGACTTTCTGATTCCAAAACTCAACTAGATTTCATCAGATCTCTGCTCTTAACTTCACCAATGCTCGAGAGGATGACTGAATCCGTCTTCTGTCAATGGTTGTTCCAAACTTGTGAAAGAGTTGCTCCAGTTCAGGCGTGCCTCCGCTCACGCCGAGATAATATACTTGGGACCATGATTCATCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

409

Amino Acids

46.59

Weight (kDa)

6.78

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 37 1.3e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 88 - 193 3.1e-09 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 92 - 312 1.8e-17 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 177 - 401 1.4e-13 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 797
AccBSI CCGCTC 1 cut(s) 1185
AciI CCGC 2 cut(s) 865, 1183
AcsI RAATTY 1 cut(s) 48
AcuI CTGAAG 1 cut(s) 430
AdeI CACNNNGTG 1 cut(s) 139
AfaI GTAC 3 cut(s) 113, 204, 927
AfiI CCNNNNNNNGG 1 cut(s) 694
AflII CTTAAG 1 cut(s) 235
AflIII ACRYGT 1 cut(s) 1024
AgsI TTSAA 4 cut(s) 439, 457, 659, 893
AluBI AGCT 6 cut(s) 234, 263, 708, 774, 814, 909
AluI AGCT 6 cut(s) 234, 263, 708, 774, 814, 909
Alw26I GTCTC 1 cut(s) 617
Ama87I CYCGRG 1 cut(s) 1103
AoxI GGCC 1 cut(s) 220
ApeKI GCWGC 4 cut(s) 263, 266, 269, 959
ApoI RAATTY 1 cut(s) 48
AspS9I GGNCC 3 cut(s) 221, 685, 1209
AsuHPI GGTGA 1 cut(s) 1086
AvaI CYCGRG 1 cut(s) 1103
AvaII GGWCC 2 cut(s) 685, 1209
BanI GGYRCC 1 cut(s) 797
BarI GAAGNNNNNNTAC 2 cut(s) 195, 227
BauI CACGAG 1 cut(s) 137
BbsI GAAGAC 2 cut(s) 89, 1117
BbvI GCAGC 4 cut(s) 250, 253, 256, 946
BccI CCATC 4 cut(s) 276, 551, 687, 876
BceAI ACGGC 1 cut(s) 135
BclI TGATCA 1 cut(s) 196
BcoDI GTCTC 1 cut(s) 617
BfaI CTAG 3 cut(s) 260, 711, 1064
BfrI CTTAAG 1 cut(s) 235
BglII AGATCT 1 cut(s) 1076
BisI GCNGC 4 cut(s) 264, 267, 270, 960
BlsI GCNGC 4 cut(s) 265, 268, 271, 961
BmcAI AGTACT 2 cut(s) 204, 927
Bme18I GGWCC 2 cut(s) 685, 1209
BmeT110I CYCGRG 1 cut(s) 1103
BmgT120I GGNCC 3 cut(s) 221, 685, 1209
BmiI GGNNCC 3 cut(s) 223, 799, 1210
BmsI GCATC 1 cut(s) 25
BoxI GACNNNNGTC 1 cut(s) 89
BpiI GAAGAC 2 cut(s) 89, 1117
BpmI CTGGAG 1 cut(s) 1149
BpuEI CTTGAG 4 cut(s) 347, 474, 551, 656
Bsa29I ATCGAT 2 cut(s) 42, 280
BsaAI YACGTR 1 cut(s) 407
BsaJI CCNNGG 1 cut(s) 483
BsaWI WCCGGW 1 cut(s) 1037
BsaXI ACNNNNNCTCC 2 cut(s) 576, 606
Bsc4I CCNNNNNNNGG 1 cut(s) 694
Bse1I ACTGG 1 cut(s) 1166
BseCI ATCGAT 2 cut(s) 42, 280
BseDI CCNNGG 1 cut(s) 483
BseGI GGATG 1 cut(s) 1116
BseLI CCNNNNNNNGG 1 cut(s) 694
BseMII CTCAG 1 cut(s) 827
BseNI ACTGG 1 cut(s) 1166
BseRI GAGGAG 1 cut(s) 417
BseXI GCAGC 4 cut(s) 250, 253, 256, 946
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 1 cut(s) 222
BshNI GGYRCC 1 cut(s) 797
BshVI ATCGAT 2 cut(s) 42, 280
BsiEI CGRYCG 1 cut(s) 46
BsiHKCI CYCGRG 1 cut(s) 1103
BsiSI CCGG 1 cut(s) 1038
BslFI GGGAC 1 cut(s) 1222
BslI CCNNNNNNNGG 1 cut(s) 694
BsmAI GTCTC 1 cut(s) 617
BsmFI GGGAC 1 cut(s) 1222
BsnI GGCC 1 cut(s) 222
BsoBI CYCGRG 1 cut(s) 1103
Bsp143I GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
Bsp19I CCATGG 1 cut(s) 483
BspACI CCGC 2 cut(s) 865, 1183
BspANI GGCC 1 cut(s) 222
BspCNI CTCAG 1 cut(s) 828
BspDI ATCGAT 2 cut(s) 42, 280
BspLI GGNNCC 3 cut(s) 223, 799, 1210
BspQI GCTCTTC 1 cut(s) 452
BspT107I GGYRCC 1 cut(s) 797
BspTI CTTAAG 1 cut(s) 235
BsrBI CCGCTC 1 cut(s) 1185
BsrI ACTGG 1 cut(s) 1166
BssECI CCNNGG 1 cut(s) 483
BssMI GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
BssSI CACGAG 1 cut(s) 137
BssT1I CCWWGG 1 cut(s) 483
Bst2BI CACGAG 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 628, 889
Bst6I CTCTTC 2 cut(s) 452, 531
BstAFI CTTAAG 1 cut(s) 235
BstBAI YACGTR 1 cut(s) 407
BstC8I GCNNGC 2 cut(s) 740, 1177
BstDEI CTNAG 3 cut(s) 689, 836, 902
BstDSI CCRYGG 1 cut(s) 483
BstEII GGTNACC 1 cut(s) 478
BstF5I GGATG 1 cut(s) 1116
BstKTI GATC 6 cut(s) 46, 199, 280, 513, 736, 1079
BstMAI GTCTC 1 cut(s) 617
BstMBI GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
BstMCI CGRYCG 1 cut(s) 46
BstMWI GCNNNNNNNGC 3 cut(s) 269, 797, 811
BstPAI GACNNNNGTC 1 cut(s) 89
BstPI GGTNACC 1 cut(s) 478
BstSNI TACGTA 1 cut(s) 407
BstV1I GCAGC 4 cut(s) 250, 253, 256, 946
BstV2I GAAGAC 2 cut(s) 89, 1117
BstX2I RGATCY 1 cut(s) 1076
BstYI RGATCY 1 cut(s) 1076
Bsu15I ATCGAT 2 cut(s) 42, 280
BsuRI GGCC 1 cut(s) 222
BsuTUI ATCGAT 2 cut(s) 42, 280
BtgI CCRYGG 1 cut(s) 483
BtgZI GCGATG 1 cut(s) 693
BtsCI GGATG 1 cut(s) 1116
BtsIMutI CAGTG 1 cut(s) 158
Cac8I GCNNGC 2 cut(s) 740, 1177
Cfr13I GGNCC 3 cut(s) 221, 685, 1209
ClaI ATCGAT 2 cut(s) 42, 280
CseI GACGC 1 cut(s) 590
Csp6I GTAC 3 cut(s) 112, 203, 926
CviAII CATG 7 cut(s) 57, 366, 378, 484, 519, 955, 1213
CviQI GTAC 3 cut(s) 112, 203, 926
DdeI CTNAG 3 cut(s) 689, 836, 902
DpnI GATC 6 cut(s) 45, 198, 279, 512, 735, 1078
DpnII GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
DraIII CACNNNGTG 1 cut(s) 139
Eam1104I CTCTTC 2 cut(s) 452, 531
EarI CTCTTC 2 cut(s) 452, 531
EciI GGCGGA 1 cut(s) 854
Eco105I TACGTA 1 cut(s) 407
Eco130I CCWWGG 1 cut(s) 483
Eco47I GGWCC 2 cut(s) 685, 1209
Eco57I CTGAAG 1 cut(s) 430
Eco88I CYCGRG 1 cut(s) 1103
Eco91I GGTNACC 1 cut(s) 478
EcoO109I RGGNCCY 1 cut(s) 685
EcoO65I GGTNACC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 483
ErhI CCWWGG 1 cut(s) 483
FaeI CATG 7 cut(s) 60, 369, 381, 487, 522, 958, 1216
FaqI GGGAC 1 cut(s) 1222
FatI CATG 7 cut(s) 56, 365, 377, 483, 518, 954, 1212
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 4 cut(s) 264, 267, 270, 960
FokI GGATG 1 cut(s) 1123
Fsp4HI GCNGC 4 cut(s) 264, 267, 270, 960
FspBI CTAG 3 cut(s) 260, 711, 1064
GluI GCNGC 4 cut(s) 264, 267, 270, 960
GsuI CTGGAG 1 cut(s) 1149
HaeIII GGCC 1 cut(s) 222
HapII CCGG 1 cut(s) 1038
HgaI GACGC 1 cut(s) 590
Hin1II CATG 7 cut(s) 60, 369, 381, 487, 522, 958, 1216
HincII GTYRAC 2 cut(s) 580, 664
HindII GTYRAC 2 cut(s) 580, 664
HindIII AAGCTT 1 cut(s) 812
HinfI GANTC 5 cut(s) 163, 286, 1049, 1118, 1216
HpaII CCGG 1 cut(s) 1038
HphI GGTGA 1 cut(s) 1086
Hpy166II GTNNAC 2 cut(s) 580, 664
Hpy188I TCNGA 8 cut(s) 186, 510, 753, 768, 837, 873, 1048, 1076
Hpy188III TCNNGA 9 cut(s) 160, 275, 300, 383, 448, 530, 635, 731, 1105
Hpy8I GTNNAC 2 cut(s) 580, 664
HpyAV CCTTC 3 cut(s) 372, 445, 908
HpyCH4III ACNGT 2 cut(s) 628, 889
HpyCH4IV ACGT 3 cut(s) 253, 406, 1024
HpyCH4V TGCA 2 cut(s) 38, 967
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 797, 811
HpyF3I CTNAG 3 cut(s) 689, 836, 902
HpySE526I ACGT 3 cut(s) 253, 406, 1024
Hsp92II CATG 7 cut(s) 60, 369, 381, 487, 522, 958, 1216
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 2 cut(s) 914, 1168
LpnPI CCDG 9 cut(s) 433, 752, 757, 927, 930, 1010, 1051, 1157, 1179
Lsp1109I GCAGC 4 cut(s) 250, 253, 256, 946
LweI GCATC 1 cut(s) 25
MaeI CTAG 3 cut(s) 260, 711, 1064
MaeII ACGT 3 cut(s) 253, 406, 1024
MaeIII GTNAC 1 cut(s) 478
MalI GATC 6 cut(s) 45, 198, 279, 512, 735, 1078
MbiI CCGCTC 1 cut(s) 1185
MboI GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
MboII GAAGA 5 cut(s) 94, 281, 469, 518, 1117
MflI RGATCY 1 cut(s) 1076
MluCI AATT 8 cut(s) 15, 48, 309, 339, 355, 409, 762, 1007
MlyI GAGTC 1 cut(s) 157
MseI TTAA 7 cut(s) 69, 236, 312, 320, 630, 884, 1088
MslI CAYNNNNRTG 2 cut(s) 573, 873
MspCI CTTAAG 1 cut(s) 235
MspI CCGG 1 cut(s) 1038
MwoI GCNNNNNNNGC 3 cut(s) 269, 797, 811
NcoI CCATGG 1 cut(s) 483
NdeII GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
NlaIII CATG 7 cut(s) 60, 369, 381, 487, 522, 958, 1216
NlaIV GGNNCC 3 cut(s) 223, 799, 1210
NmeAIII GCCGAG 1 cut(s) 1217
PaeR7I CTCGAG 1 cut(s) 1103
PciSI GCTCTTC 1 cut(s) 452
PfeI GAWTC 4 cut(s) 286, 1049, 1118, 1216
PkrI GCNGC 4 cut(s) 265, 268, 271, 961
Ple19I CGATCG 1 cut(s) 46
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
Ppu21I YACGTR 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 685
PshAI GACNNNNGTC 1 cut(s) 89
Psp5II RGGWCCY 1 cut(s) 685
PspEI GGTNACC 1 cut(s) 478
PspN4I GGNNCC 3 cut(s) 223, 799, 1210
PspPI GGNCC 3 cut(s) 221, 685, 1209
PspPPI RGGWCCY 1 cut(s) 685
PsrI GAACNNNNNNTAC 2 cut(s) 918, 950
PsuI RGATCY 1 cut(s) 1076
PvuI CGATCG 1 cut(s) 46
RsaI GTAC 3 cut(s) 113, 204, 927
RsaNI GTAC 3 cut(s) 112, 203, 926
RseI CAYNNNNRTG 2 cut(s) 573, 873
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 7 cut(s) 69, 236, 312, 320, 630, 884, 1088
SatI GCNGC 4 cut(s) 264, 267, 270, 960
Sau3AI GATC 6 cut(s) 43, 196, 277, 510, 733, 1076
Sau96I GGNCC 3 cut(s) 221, 685, 1209
ScaI AGTACT 2 cut(s) 204, 927
SchI GAGTC 1 cut(s) 157
SfaNI GCATC 1 cut(s) 25
Sfr274I CTCGAG 1 cut(s) 1103
SinI GGWCC 2 cut(s) 685, 1209
SlaI CTCGAG 1 cut(s) 1103
SmiMI CAYNNNNRTG 2 cut(s) 573, 873
SmlI CTYRAG 6 cut(s) 235, 326, 489, 530, 635, 1103
SmoI CTYRAG 6 cut(s) 235, 326, 489, 530, 635, 1103
SnaBI TACGTA 1 cut(s) 407
Sse9I AATT 8 cut(s) 15, 48, 309, 339, 355, 409, 762, 1007
SsiI CCGC 2 cut(s) 865, 1183
SspMI CTAG 3 cut(s) 260, 711, 1064
StyI CCWWGG 1 cut(s) 483
TaaI ACNGT 2 cut(s) 628, 889
TaiI ACGT 3 cut(s) 256, 409, 1027
TaqI TCGA 7 cut(s) 42, 46, 161, 280, 930, 937, 1104
TasI AATT 8 cut(s) 15, 48, 309, 339, 355, 409, 762, 1007
TatI WGTACW 2 cut(s) 202, 925
TfiI GAWTC 4 cut(s) 286, 1049, 1118, 1216
Tru1I TTAA 7 cut(s) 69, 236, 312, 320, 630, 884, 1088
Tru9I TTAA 7 cut(s) 69, 236, 312, 320, 630, 884, 1088
TscAI CASTG 1 cut(s) 158
TseI GCWGC 4 cut(s) 263, 266, 269, 959
TspDTI ATGAA 8 cut(s) 203, 281, 354, 366, 507, 891, 1060, 1208
TspGWI ACGGA 1 cut(s) 1111
TspRI CASTG 1 cut(s) 158
Vha464I CTTAAG 1 cut(s) 235
VpaK11BI GGWCC 2 cut(s) 685, 1209
XapI RAATTY 1 cut(s) 48
XhoI CTCGAG 1 cut(s) 1103
XspI CTAG 3 cut(s) 260, 711, 1064
ZrmI AGTACT 2 cut(s) 204, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.