Rw3G005370

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000103
Physical Location & Seq
Reverse (-)
4459515 .. 4461521
2007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G005370.1

Sequence Viewer

Length: 1272 bp
ATGATGATCAAGTTAACGTGTGCCAGCATGGGACTGAAAATGGAGTTGGATAGACTTAGCAGTTTACCAGATGATGTTACAGAAAAGATTTTGGAACGTTTGCCGCTTAAGGAGGCTGTAAGGACAAGTGTTTTATCCAGAAAGTGGAGGTACAAATCGGAAATGCTTCAAACTCTATTGTTTCATAATAACTGTGTTTCGACTCAAAGTCATCCAACCTACAGCTTTGCGAATATTGTTGATCATGTACTCTTACTCCATAAAGGTCCCATACACAGGTTCGAGCTTTCTTTCAATGGTAAGCTAGCCACTAGGGATATAGATCGATGGATTTTTCACCTATCCAGAAACCCTGTCATCGAACAGATGATACTAGACAATTTTGAAGGGGACATCTACAACATTCCGTCATGTTTGTTTTCTTTTCAAGATATCGTTTATTTAGAGTTATACAGGTGTTTGCTAAACCCTCCTTCCACATTCAAAGGCTTTGGCAGCTTGAAGAGCCTTGATCTTTGGTCTGTTACTTTGGCCCAACATGTGTTTGACAACTTGATTGGTTGCAGTCCTGTGCTTGAGATATTGAAATTGCAAAGATGTGATGGTTTCACCAATCTCAAGATTGATGCACCCAAGCTCTGGTTTATTTACATAATAGGGGCCTTTGAAGATTTTAACCTCGTGGGTTCCTCAAATCTTGTGGATGCTTCCTTTGATTTGCAGGTCATTGTTGATCAAAGAGAGAATTGTACTAGTTTTGGGAATTTGCTTAAGTTTTTTGATCACCAGCTGCCTCATATTCGAAGGCTCACAATAAAGAGGAACTTTCTAAAATACTTGTCTATTGGTGCCTTGCCAGAGAAGCTCCCTAAACCGTGCCAATATCTCAATTTTCTTTCTTTAGACATGAGCTTTGACAATCCGGTTGAAATTTCAACTGTCTTATGCCTTCTGAGAAGCTCTCCTGCTCTAAAAGAACTGAAAATTTTGGTGGACCCTGAAAAGAATCTCGCTGCTGTGGGAGAAGTGGGATCTTGTTTATATGACAACTACAACTGTGCATACACTCAACTGCGGCTTGTGGAAATAACCAAGATCTCTGGTGTAAAAGCTCAACTAGATTTCATAGAATCTCTGCTTCTAAGTTCACCTGTGCTTGAGAGAATGACTGTTCAACCTGCTTCTGTCGATGGTTTTTTGAAGCTAGTAAAAGATTTACTTCTGTTTAAGCGTAATTCAAAGCGTGCAGAGATACTGGTTTTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

423

Amino Acids

48.32

Weight (kDa)

7.09

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 52 1.3e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 95 - 392 4.8e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 108 - 329 7.3e-15 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 712, 1186
AccB1I GGYRCC 1 cut(s) 848
AccB7I CCANNNNNTGG 2 cut(s) 144, 639
AciI CCGC 2 cut(s) 104, 1075
AclI AACGTT 1 cut(s) 97
AclWI GGATC 1 cut(s) 1039
AcsI RAATTY 3 cut(s) 763, 930, 984
AfaI GTAC 3 cut(s) 152, 249, 751
AfiI CCNNNNNNNGG 3 cut(s) 144, 276, 639
AflII CTTAAG 2 cut(s) 107, 770
AflIII ACRYGT 2 cut(s) 17, 538
AhdI GACNNNNNGTC 1 cut(s) 207
AhlI ACTAGT 1 cut(s) 752
AjuI GAANNNNNNNTTGG 2 cut(s) 29, 61
AlwI GGATC 1 cut(s) 1039
AoxI GGCC 2 cut(s) 531, 660
ApeKI GCWGC 3 cut(s) 495, 790, 1013
ApoI RAATTY 3 cut(s) 763, 930, 984
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
Asp700I GAANNNNTTC 1 cut(s) 165
AspS9I GGNCC 5 cut(s) 266, 532, 660, 994, 1264
AsuHPI GGTGA 4 cut(s) 329, 601, 776, 1140
AsuII TTCGAA 1 cut(s) 802
AsuNHI GCTAGC 1 cut(s) 304
AvaII GGWCC 3 cut(s) 266, 994, 1264
BanI GGYRCC 1 cut(s) 848
BauI CACGAG 1 cut(s) 680
BbvI GCAGC 3 cut(s) 507, 777, 1000
BccI CCATC 3 cut(s) 321, 596, 1184
BclI TGATCA 4 cut(s) 6, 241, 733, 781
BcuI ACTAGT 1 cut(s) 752
BfaI CTAG 6 cut(s) 305, 312, 374, 753, 1118, 1205
BfmI CTRYAG 1 cut(s) 220
BfrI CTTAAG 2 cut(s) 107, 770
BfuAI ACCTGC 2 cut(s) 712, 1186
BglII AGATCT 1 cut(s) 1095
BisI GCNGC 5 cut(s) 104, 496, 791, 1014, 1076
BlsI GCNGC 5 cut(s) 105, 497, 792, 1015, 1077
Bme18I GGWCC 3 cut(s) 266, 994, 1264
BmeRI GACNNNNNGTC 1 cut(s) 207
BmgT120I GGNCC 5 cut(s) 266, 532, 660, 994, 1264
BmiI GGNNCC 6 cut(s) 268, 661, 688, 850, 996, 1266
BmsI GCATC 2 cut(s) 616, 694
BmtI GCTAGC 1 cut(s) 308
BplI GAGNNNNNCTC 2 cut(s) 946, 978
Bpu14I TTCGAA 1 cut(s) 802
BpuEI CTTGAG 3 cut(s) 596, 602, 1178
Bsa29I ATCGAT 1 cut(s) 325
BsaBI GATNNNNATC 1 cut(s) 321
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 2 cut(s) 240, 270
Bsc4I CCNNNNNNNGG 3 cut(s) 144, 276, 639
Bse1I ACTGG 1 cut(s) 1260
Bse8I GATNNNNATC 1 cut(s) 321
BseCI ATCGAT 1 cut(s) 325
BseGI GGATG 2 cut(s) 211, 709
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 3 cut(s) 144, 276, 639
BseMII CTCAG 1 cut(s) 944
BseNI ACTGG 1 cut(s) 1260
BseXI GCAGC 3 cut(s) 507, 777, 1000
BsgI GTGCAG 1 cut(s) 1266
BshFI GGCC 2 cut(s) 533, 662
BshNI GGYRCC 1 cut(s) 848
BshVI ATCGAT 1 cut(s) 325
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 3 cut(s) 45, 252, 404
BslI CCNNNNNNNGG 3 cut(s) 144, 276, 639
BsmFI GGGAC 3 cut(s) 45, 252, 404
BsnI GGCC 2 cut(s) 533, 662
Bsp119I TTCGAA 1 cut(s) 802
Bsp143I GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
BspACI CCGC 2 cut(s) 104, 1075
BspANI GGCC 2 cut(s) 533, 662
BspCNI CTCAG 1 cut(s) 945
BspDI ATCGAT 1 cut(s) 325
BspLI GGNNCC 6 cut(s) 268, 661, 688, 850, 996, 1266
BspMI ACCTGC 2 cut(s) 712, 1186
BspOI GCTAGC 1 cut(s) 308
BspPI GGATC 1 cut(s) 1039
BspQI GCTCTTC 1 cut(s) 497
BspT104I TTCGAA 1 cut(s) 802
BspT107I GGYRCC 1 cut(s) 848
BspTI CTTAAG 2 cut(s) 107, 770
BsrI ACTGG 1 cut(s) 1260
BssMI GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
BssSI CACGAG 1 cut(s) 680
Bst2BI CACGAG 1 cut(s) 680
Bst4CI ACNGT 5 cut(s) 194, 876, 940, 1058, 1171
Bst6I CTCTTC 1 cut(s) 497
BstAFI CTTAAG 2 cut(s) 107, 770
BstBI TTCGAA 1 cut(s) 802
BstC8I GCNNGC 3 cut(s) 25, 306, 1245
BstDEI CTNAG 3 cut(s) 56, 953, 1142
BstF5I GGATG 2 cut(s) 211, 709
BstKTI GATC 8 cut(s) 9, 244, 325, 514, 736, 784, 1034, 1098
BstMBI GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
BstMWI GCNNNNNNNGC 3 cut(s) 495, 504, 862
BstNSI RCATGY 1 cut(s) 542
BstSFI CTRYAG 1 cut(s) 220
BstV1I GCAGC 3 cut(s) 507, 777, 1000
BstX2I RGATCY 2 cut(s) 1031, 1095
BstYI RGATCY 2 cut(s) 1031, 1095
Bsu15I ATCGAT 1 cut(s) 325
BsuRI GGCC 2 cut(s) 533, 662
BsuTUI ATCGAT 1 cut(s) 325
BtsCI GGATG 2 cut(s) 211, 709
BveI ACCTGC 2 cut(s) 712, 1186
Cac8I GCNNGC 3 cut(s) 25, 306, 1245
Cfr13I GGNCC 5 cut(s) 266, 532, 660, 994, 1264
ClaI ATCGAT 1 cut(s) 325
Csp6I GTAC 3 cut(s) 151, 248, 750
CspCI CAANNNNNGTGG 2 cut(s) 681, 716
CviAII CATG 5 cut(s) 28, 245, 411, 539, 907
CviQI GTAC 3 cut(s) 151, 248, 750
DdeI CTNAG 3 cut(s) 56, 953, 1142
DpnI GATC 8 cut(s) 8, 243, 324, 513, 735, 783, 1033, 1097
DpnII GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
DriI GACNNNNNGTC 1 cut(s) 207
Eam1104I CTCTTC 1 cut(s) 497
Eam1105I GACNNNNNGTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 497
Eco32I GATATC 1 cut(s) 433
Eco47I GGWCC 3 cut(s) 266, 994, 1264
EcoO109I RGGNCCY 2 cut(s) 266, 660
EcoRV GATATC 1 cut(s) 433
FaeI CATG 5 cut(s) 31, 248, 414, 542, 910
FalI AAGNNNNNCTT 4 cut(s) 809, 841, 1203, 1235
FaqI GGGAC 3 cut(s) 45, 252, 404
FatI CATG 5 cut(s) 27, 244, 410, 538, 906
FbaI TGATCA 4 cut(s) 6, 241, 733, 781
Fnu4HI GCNGC 5 cut(s) 104, 496, 791, 1014, 1076
FokI GGATG 2 cut(s) 198, 716
Fsp4HI GCNGC 5 cut(s) 104, 496, 791, 1014, 1076
FspBI CTAG 6 cut(s) 305, 312, 374, 753, 1118, 1205
GluI GCNGC 5 cut(s) 104, 496, 791, 1014, 1076
HaeIII GGCC 2 cut(s) 533, 662
HapII CCGG 1 cut(s) 923
Hin1II CATG 5 cut(s) 31, 248, 414, 542, 910
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 3 cut(s) 202, 1006, 1130
HpaI GTTAAC 1 cut(s) 15
HpaII CCGG 1 cut(s) 923
HphI GGTGA 4 cut(s) 329, 601, 776, 1140
Hpy166II GTNNAC 4 cut(s) 15, 65, 994, 1148
Hpy188I TCNGA 2 cut(s) 160, 954
Hpy188III TCNNGA 4 cut(s) 138, 345, 428, 619
Hpy8I GTNNAC 4 cut(s) 15, 65, 994, 1148
HpyAV CCTTC 4 cut(s) 380, 483, 798, 959
HpyCH4III ACNGT 5 cut(s) 194, 876, 940, 1058, 1171
HpyCH4IV ACGT 2 cut(s) 17, 97
HpyCH4V TGCA 6 cut(s) 564, 592, 629, 721, 1061, 1247
HpyF10VI GCNNNNNNNGC 3 cut(s) 495, 504, 862
HpyF3I CTNAG 3 cut(s) 56, 953, 1142
HpySE526I ACGT 2 cut(s) 17, 97
Hsp92II CATG 5 cut(s) 31, 248, 414, 542, 910
Ksp22I TGATCA 4 cut(s) 6, 241, 733, 781
KspAI GTTAAC 1 cut(s) 15
Kzo9I GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
LguI GCTCTTC 1 cut(s) 497
LmnI GCTCC 1 cut(s) 870
Lsp1109I GCAGC 3 cut(s) 507, 777, 1000
LweI GCATC 2 cut(s) 616, 694
MaeI CTAG 6 cut(s) 305, 312, 374, 753, 1118, 1205
MaeII ACGT 2 cut(s) 17, 97
MaeIII GTNAC 2 cut(s) 76, 523
MalI GATC 8 cut(s) 8, 243, 324, 513, 735, 783, 1033, 1097
MboI GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
MboII GAAGA 2 cut(s) 514, 680
MflI RGATCY 2 cut(s) 1031, 1095
MluCI AATT 8 cut(s) 379, 587, 745, 763, 889, 930, 984, 1234
MlyI GAGTC 1 cut(s) 196
MmeI TCCRAC 2 cut(s) 27, 239
MnlI CCTC 7 cut(s) 106, 141, 480, 689, 700, 804, 813
MroXI GAANNNNTTC 1 cut(s) 165
MseI TTAA 5 cut(s) 14, 108, 675, 771, 1227
MspA1I CMGCKG 1 cut(s) 790
MspCI CTTAAG 2 cut(s) 107, 770
MspI CCGG 1 cut(s) 923
MwoI GCNNNNNNNGC 3 cut(s) 495, 504, 862
NdeII GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
NheI GCTAGC 1 cut(s) 304
NlaIII CATG 5 cut(s) 31, 248, 414, 542, 910
NlaIV GGNNCC 6 cut(s) 268, 661, 688, 850, 996, 1266
NspI RCATGY 1 cut(s) 542
NspV TTCGAA 1 cut(s) 802
PciI ACATGT 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 497
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 2 cut(s) 1006, 1130
PflMI CCANNNNNTGG 2 cut(s) 144, 639
PkrI GCNGC 5 cut(s) 105, 497, 792, 1015, 1077
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
PpuMI RGGWCCY 1 cut(s) 266
PscI ACATGT 1 cut(s) 538
Psp1406I AACGTT 1 cut(s) 97
Psp5II RGGWCCY 1 cut(s) 266
PspN4I GGNNCC 6 cut(s) 268, 661, 688, 850, 996, 1266
PspPI GGNCC 5 cut(s) 266, 532, 660, 994, 1264
PspPPI RGGWCCY 1 cut(s) 266
PsrI GAACNNNNNNTAC 2 cut(s) 354, 386
PsuI RGATCY 2 cut(s) 1031, 1095
PvuII CAGCTG 1 cut(s) 790
RsaI GTAC 3 cut(s) 152, 249, 751
RsaNI GTAC 3 cut(s) 151, 248, 750
SapI GCTCTTC 1 cut(s) 497
SaqAI TTAA 5 cut(s) 14, 108, 675, 771, 1227
SatI GCNGC 5 cut(s) 104, 496, 791, 1014, 1076
Sau3AI GATC 8 cut(s) 6, 241, 322, 511, 733, 781, 1031, 1095
Sau96I GGNCC 5 cut(s) 266, 532, 660, 994, 1264
SchI GAGTC 1 cut(s) 196
SfaNI GCATC 2 cut(s) 616, 694
SfcI CTRYAG 1 cut(s) 220
SfuI TTCGAA 1 cut(s) 802
SinI GGWCC 3 cut(s) 266, 994, 1264
SmlI CTYRAG 5 cut(s) 107, 575, 617, 770, 1157
SmoI CTYRAG 5 cut(s) 107, 575, 617, 770, 1157
SpeI ACTAGT 1 cut(s) 752
Sse9I AATT 8 cut(s) 379, 587, 745, 763, 889, 930, 984, 1234
SsiI CCGC 2 cut(s) 104, 1075
SspI AATATT 1 cut(s) 235
SspMI CTAG 6 cut(s) 305, 312, 374, 753, 1118, 1205
TaaI ACNGT 5 cut(s) 194, 876, 940, 1058, 1171
TaiI ACGT 2 cut(s) 20, 100
TaqI TCGA 6 cut(s) 200, 282, 325, 360, 802, 1188
TasI AATT 8 cut(s) 379, 587, 745, 763, 889, 930, 984, 1234
TatI WGTACW 2 cut(s) 247, 749
TauI GCSGC 2 cut(s) 106, 1078
TfiI GAWTC 2 cut(s) 1006, 1130
Tru1I TTAA 5 cut(s) 14, 108, 675, 771, 1227
Tru9I TTAA 5 cut(s) 14, 108, 675, 771, 1227
TseI GCWGC 3 cut(s) 495, 790, 1013
TspDTI ATGAA 2 cut(s) 173, 1114
TspGWI ACGGA 1 cut(s) 396
Van91I CCANNNNNTGG 2 cut(s) 144, 639
Vha464I CTTAAG 2 cut(s) 107, 770
VpaK11BI GGWCC 3 cut(s) 266, 994, 1264
XapI RAATTY 3 cut(s) 763, 930, 984
XceI RCATGY 1 cut(s) 542
XmnI GAANNNNTTC 1 cut(s) 165
XspI CTAG 6 cut(s) 305, 312, 374, 753, 1118, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.