RchiOBHm_Chr6g0248871

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000103
Physical Location & Seq
Reverse (-)
4739697 .. 4741892
2196 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22309

Sequence Viewer

Length: 1290 bp
ATGGAGCAAACAGAACCACCCAAGTCCCGTTCGAAAGTGGAGATAGAGATGGAGTTGGACAGAATCAGCAACTTACCAAGTGATGTTATAGTTAAAATTCTGTCATGTTTGACTCTTAAGGAGGCAGTGAGGACAAGTGTTCTTTCGAGCAGGTGGAGGAACAGATGGGCTATGCTTTCAGGACTTATATTTGATGAGAAGTGTTTCTCGACTGAAAACTGTGCAACCTTCGTGAACATTGTTTATCATGTACTCTTAAGTCACATTGTCCCAGTAGAGAAGTTTGTGCTTTCTCACCCACATCTTATACCTACAATAGATATTGATCGATGGGTTCTTCATCTATCAAGAAACTCTATTAAAGTTTTCGAACTTCGTATTCCTGATGGGCCTCAATACGAGATGCCATTACGTTTCTTTTCTTATCAAGATATGATTGAGCTGAAGTTATCTCAGTGCTTGCTGAAACCTCCAACCACATTCAAAGGCTTCAGAACTTTGAAGATGGTTAGATTTCAGCGTGTTGCCTTGGCCCAAGATGTGTTGGAAAATCTGATTCTTTGCTGTCCTCTGCTGGAGAGTTTGACAATTATAAAATGTATTGGCTTTACCCATCTCAAGATTGATGCCCCAAATCTTCGATTCCTTTCTTTCTCTGGTCGCTTGGAAGATGTTAGTCTTCAGAATACCTTAAATCTTGCTGTTGTTCGCTTTAATCCTTGGCGCATTTATCACAGACAAGATCATGTCAGTTCTTCCAATTTGGCAAAATTTTTCGTTGACCTGCCTCATATTCAGAGGCTCACAATTGATGGTGCGGCTGTACAGTATTTAGCTGTTGGTGACTTGCCTGGAAGGCTCCCCAAACCATGTCTACATCTAAATTTTCTTTCTCTCCTCCTAAGCTTTAATGTTCTTGCGGAAATTTTAACTACTATATATCTTCTGAGAAGCTCCCCTGCTCTGAAAGTACTACATGTTATGGTCCGCCTCAGCCTTCTTCAGCGCCTCAACCGTCTTCATTCTGTTAAAGAAGAAGCAAAGTCTTGGTTGGATAACCTAGATGACGACATAAATTGCTCATTCCCCAAACTGCAATTTGTTCAAATAACCGAATTTTCTGGTAGCAAAGCTGAACTAGATTTCATCAAATTTTTGCTTGTAAATTCACCCGCGCTTGAGACGATGACTATTAGGGCTTTATCCGCCGATGGTTCTTCAGAAGTTTTAAAGAAGTTGCTCCAGTTAAGGCGGACCTCAAGTGCAGAGATTATATACTTGGATCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

429

Amino Acids

49.15

Weight (kDa)

8.77

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 59 5.5e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 106 - 208 3.2e-09 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 108 - 327 3.9e-12 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 208 - 403 9.2e-07 At1g61320/AtMIF1, LRR domain
FBD PF08387 364 - 398 6.3e-08 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 593
AarI CACCTGC 1 cut(s) 141
Acc36I ACCTGC 2 cut(s) 141, 792
AccI GTMKAC 1 cut(s) 874
AccII CGCG 1 cut(s) 1175
AciI CCGC 6 cut(s) 818, 920, 988, 1173, 1206, 1252
AclWI GGATC 1 cut(s) 1277
AcsI RAATTY 7 cut(s) 96, 770, 883, 924, 1115, 1151, 1165
AcuI CTGAAG 5 cut(s) 464, 475, 665, 986, 1203
AfaI GTAC 3 cut(s) 252, 825, 972
AflII CTTAAG 2 cut(s) 116, 256
AflIII ACRYGT 1 cut(s) 976
AgsI TTSAA 3 cut(s) 484, 502, 1106
AjnI CCWGG 1 cut(s) 850
AluBI AGCT 5 cut(s) 442, 836, 906, 954, 1133
AluI AGCT 5 cut(s) 442, 836, 906, 954, 1133
Alw26I GTCTC 1 cut(s) 1175
AlwI GGATC 1 cut(s) 1277
AoxI GGCC 2 cut(s) 389, 531
ApoI RAATTY 7 cut(s) 96, 770, 883, 924, 1115, 1151, 1165
Asp700I GAANNNNTTC 1 cut(s) 203
AspLEI GCGC 3 cut(s) 726, 1008, 1177
AspS9I GGNCC 4 cut(s) 389, 532, 985, 1254
AsuHPI GGTGA 3 cut(s) 287, 854, 1161
AsuII TTCGAA 2 cut(s) 32, 369
AvaII GGWCC 2 cut(s) 985, 1254
BamHI GGATCC 1 cut(s) 1282
BbsI GAAGAC 2 cut(s) 671, 1010
BbvCI CCTCAGC 1 cut(s) 992
BccI CCATC 8 cut(s) 43, 159, 324, 380, 499, 621, 806, 1205
BciT130I CCWGG 1 cut(s) 852
BcoDI GTCTC 1 cut(s) 1175
BfaI CTAG 2 cut(s) 1061, 1139
BfoI RGCGCY 1 cut(s) 1009
BfrI CTTAAG 2 cut(s) 116, 256
BfuAI ACCTGC 2 cut(s) 141, 792
BglI GCCNNNNNGGC 1 cut(s) 856
BisI GCNGC 1 cut(s) 819
BlsI GCNGC 1 cut(s) 820
BmcAI AGTACT 1 cut(s) 972
Bme1390I CCNGG 1 cut(s) 852
Bme18I GGWCC 2 cut(s) 985, 1254
BmgT120I GGNCC 4 cut(s) 389, 532, 985, 1254
BmiI GGNNCC 2 cut(s) 860, 1284
BmrFI CCNGG 1 cut(s) 852
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 2 cut(s) 393, 616
BmuI ACTGGG 1 cut(s) 266
BpiI GAAGAC 2 cut(s) 671, 1010
BpmI CTGGAG 2 cut(s) 596, 1226
Bpu10I CCTNAGC 2 cut(s) 902, 992
Bpu14I TTCGAA 2 cut(s) 32, 369
BpuEI CTTGAG 3 cut(s) 602, 1199, 1243
Bsa29I ATCGAT 1 cut(s) 328
BsaBI GATNNNNATC 1 cut(s) 324
BsaJI CCNNGG 2 cut(s) 528, 719
Bse1I ACTGG 2 cut(s) 272, 1243
Bse8I GATNNNNATC 1 cut(s) 324
BseBI CCWGG 1 cut(s) 852
BseCI ATCGAT 1 cut(s) 328
BseDI CCNNGG 2 cut(s) 528, 719
BseJI GATNNNNATC 1 cut(s) 324
BseMII CTCAG 3 cut(s) 467, 938, 1006
BseNI ACTGG 2 cut(s) 272, 1243
BseRI GAGGAG 1 cut(s) 887
BsgI GTGCAG 1 cut(s) 1284
Bsh1236I CGCG 1 cut(s) 1175
BshFI GGCC 2 cut(s) 391, 533
BshVI ATCGAT 1 cut(s) 328
BslFI GGGAC 2 cut(s) 10, 254
BsmAI GTCTC 1 cut(s) 1175
BsmBI CGTCTC 1 cut(s) 1175
BsmFI GGGAC 2 cut(s) 10, 254
BsnI GGCC 2 cut(s) 391, 533
Bsp119I TTCGAA 2 cut(s) 32, 369
Bsp1407I TGTACA 1 cut(s) 823
Bsp143I GATC 3 cut(s) 325, 742, 1282
BspACI CCGC 6 cut(s) 818, 920, 988, 1173, 1206, 1252
BspANI GGCC 2 cut(s) 391, 533
BspCNI CTCAG 3 cut(s) 466, 939, 1005
BspDI ATCGAT 1 cut(s) 328
BspFNI CGCG 1 cut(s) 1175
BspLI GGNNCC 2 cut(s) 860, 1284
BspMI ACCTGC 2 cut(s) 141, 792
BspPI GGATC 1 cut(s) 1277
BspT104I TTCGAA 2 cut(s) 32, 369
BspTI CTTAAG 2 cut(s) 116, 256
BsrGI TGTACA 1 cut(s) 823
BsrI ACTGG 2 cut(s) 272, 1243
BssECI CCNNGG 2 cut(s) 528, 719
BssMI GATC 3 cut(s) 325, 742, 1282
BssT1I CCWWGG 2 cut(s) 528, 719
Bst2UI CCWGG 1 cut(s) 852
Bst4CI ACNGT 3 cut(s) 221, 828, 1016
BstAFI CTTAAG 2 cut(s) 116, 256
BstAUI TGTACA 1 cut(s) 823
BstBI TTCGAA 2 cut(s) 32, 369
BstC8I GCNNGC 1 cut(s) 461
BstDEI CTNAG 4 cut(s) 453, 902, 947, 992
BstFNI CGCG 1 cut(s) 1175
BstH2I RGCGCY 1 cut(s) 1009
BstHHI GCGC 3 cut(s) 726, 1008, 1177
BstKTI GATC 3 cut(s) 328, 745, 1285
BstMAI GTCTC 1 cut(s) 1175
BstMBI GATC 3 cut(s) 325, 742, 1282
BstMWI GCNNNNNNNGC 2 cut(s) 856, 1205
BstNI CCWGG 1 cut(s) 852
BstNSI RCATGY 1 cut(s) 980
BstSCI CCNGG 1 cut(s) 850
BstUI CGCG 1 cut(s) 1175
BstV2I GAAGAC 2 cut(s) 671, 1010
BstX2I RGATCY 1 cut(s) 1282
BstYI RGATCY 1 cut(s) 1282
Bsu15I ATCGAT 1 cut(s) 328
BsuRI GGCC 2 cut(s) 391, 533
BsuTUI ATCGAT 1 cut(s) 328
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 2 cut(s) 132, 461
BveI ACCTGC 2 cut(s) 141, 792
Cac8I GCNNGC 1 cut(s) 461
CfoI GCGC 3 cut(s) 726, 1008, 1177
Cfr13I GGNCC 4 cut(s) 389, 532, 985, 1254
ClaI ATCGAT 1 cut(s) 328
Csp6I GTAC 3 cut(s) 251, 824, 971
CviAII CATG 5 cut(s) 105, 248, 746, 870, 977
CviQI GTAC 3 cut(s) 251, 824, 971
DdeI CTNAG 4 cut(s) 453, 902, 947, 992
DpnI GATC 3 cut(s) 327, 744, 1284
DpnII GATC 3 cut(s) 325, 742, 1282
DraI TTTAAA 1 cut(s) 1230
EciI GGCGGA 3 cut(s) 977, 1195, 1267
Eco130I CCWWGG 2 cut(s) 528, 719
Eco47I GGWCC 2 cut(s) 985, 1254
Eco57I CTGAAG 5 cut(s) 464, 475, 665, 986, 1203
EcoRII CCWGG 1 cut(s) 850
EcoT14I CCWWGG 2 cut(s) 528, 719
ErhI CCWWGG 2 cut(s) 528, 719
Esp3I CGTCTC 1 cut(s) 1175
FaeI CATG 5 cut(s) 108, 251, 749, 873, 980
FaqI GGGAC 2 cut(s) 10, 254
FatI CATG 5 cut(s) 104, 247, 745, 869, 976
FauI CCCGC 1 cut(s) 1180
FblI GTMKAC 1 cut(s) 874
Fnu4HI GCNGC 1 cut(s) 819
Fsp4HI GCNGC 1 cut(s) 819
FspBI CTAG 2 cut(s) 1061, 1139
GlaI GCGC 3 cut(s) 725, 1007, 1176
GluI GCNGC 1 cut(s) 819
GsuI CTGGAG 2 cut(s) 596, 1226
HaeII RGCGCY 1 cut(s) 1009
HaeIII GGCC 2 cut(s) 391, 533
HhaI GCGC 3 cut(s) 726, 1008, 1177
Hin1II CATG 5 cut(s) 108, 251, 749, 873, 980
Hin6I GCGC 3 cut(s) 724, 1006, 1175
HinP1I GCGC 3 cut(s) 724, 1006, 1175
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HindIII AAGCTT 1 cut(s) 904
HinfI GANTC 4 cut(s) 63, 112, 556, 642
HphI GGTGA 3 cut(s) 287, 854, 1161
Hpy166II GTNNAC 3 cut(s) 235, 781, 875
Hpy188I TCNGA 7 cut(s) 494, 555, 684, 798, 948, 966, 1222
Hpy188III TCNNGA 7 cut(s) 180, 208, 232, 348, 383, 428, 619
Hpy8I GTNNAC 3 cut(s) 235, 781, 875
HpyAV CCTTC 3 cut(s) 238, 849, 1007
HpyCH4III ACNGT 3 cut(s) 221, 828, 1016
HpyCH4IV ACGT 1 cut(s) 412
HpyCH4V TGCA 3 cut(s) 224, 1096, 1265
HpyF10VI GCNNNNNNNGC 2 cut(s) 856, 1205
HpyF3I CTNAG 4 cut(s) 453, 902, 947, 992
HpySE526I ACGT 1 cut(s) 412
Hsp92II CATG 5 cut(s) 108, 251, 749, 873, 980
HspAI GCGC 3 cut(s) 724, 1006, 1175
Kzo9I GATC 3 cut(s) 325, 742, 1282
LmnI GCTCC 4 cut(s) 4, 864, 959, 1245
LweI GCATC 2 cut(s) 393, 616
MaeI CTAG 2 cut(s) 1061, 1139
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 2 cut(s) 260, 842
MalI GATC 3 cut(s) 327, 744, 1284
MboI GATC 3 cut(s) 325, 742, 1282
MfeI CAATTG 1 cut(s) 807
MflI RGATCY 1 cut(s) 1282
MlyI GAGTC 1 cut(s) 106
MmeI TCCRAC 4 cut(s) 36, 497, 525, 1032
MroXI GAANNNNTTC 1 cut(s) 203
MspCI CTTAAG 2 cut(s) 116, 256
MspR9I CCNGG 1 cut(s) 852
MunI CAATTG 1 cut(s) 807
MvaI CCWGG 1 cut(s) 852
MvnI CGCG 1 cut(s) 1175
MwoI GCNNNNNNNGC 2 cut(s) 856, 1205
NdeII GATC 3 cut(s) 325, 742, 1282
NlaIII CATG 5 cut(s) 108, 251, 749, 873, 980
NlaIV GGNNCC 2 cut(s) 860, 1284
NmuCI GTSAC 2 cut(s) 260, 842
NspI RCATGY 1 cut(s) 980
NspV TTCGAA 2 cut(s) 32, 369
PaqCI CACCTGC 1 cut(s) 141
PciI ACATGT 1 cut(s) 976
PdmI GAANNNNTTC 1 cut(s) 203
PfeI GAWTC 3 cut(s) 63, 556, 642
PkrI GCNGC 1 cut(s) 820
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PscI ACATGT 1 cut(s) 976
PsiI TTATAA 1 cut(s) 593
Psp6I CCWGG 1 cut(s) 850
PspGI CCWGG 1 cut(s) 850
PspN4I GGNNCC 2 cut(s) 860, 1284
PspPI GGNCC 4 cut(s) 389, 532, 985, 1254
PsuI RGATCY 1 cut(s) 1282
RsaI GTAC 3 cut(s) 252, 825, 972
RsaNI GTAC 3 cut(s) 251, 824, 971
SatI GCNGC 1 cut(s) 819
Sau3AI GATC 3 cut(s) 325, 742, 1282
Sau96I GGNCC 4 cut(s) 389, 532, 985, 1254
ScaI AGTACT 1 cut(s) 972
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 1 cut(s) 852
SfaNI GCATC 2 cut(s) 393, 616
SfuI TTCGAA 2 cut(s) 32, 369
SinI GGWCC 2 cut(s) 985, 1254
SmlI CTYRAG 5 cut(s) 116, 256, 617, 1178, 1258
SmoI CTYRAG 5 cut(s) 116, 256, 617, 1178, 1258
SsiI CCGC 6 cut(s) 818, 920, 988, 1173, 1206, 1252
SspMI CTAG 2 cut(s) 1061, 1139
StyD4I CCNGG 1 cut(s) 850
StyI CCWWGG 2 cut(s) 528, 719
TaaI ACNGT 3 cut(s) 221, 828, 1016
TaiI ACGT 1 cut(s) 415
TaqI TCGA 6 cut(s) 32, 146, 209, 328, 369, 640
TatI WGTACW 3 cut(s) 250, 823, 970
TauI GCSGC 1 cut(s) 821
TfiI GAWTC 3 cut(s) 63, 556, 642
TscAI CASTG 2 cut(s) 132, 461
TseFI GTSAC 2 cut(s) 260, 842
Tsp45I GTSAC 2 cut(s) 260, 842
TspDTI ATGAA 3 cut(s) 329, 1010, 1135
TspRI CASTG 2 cut(s) 132, 461
Vha464I CTTAAG 2 cut(s) 116, 256
VpaK11BI GGWCC 2 cut(s) 985, 1254
XapI RAATTY 7 cut(s) 96, 770, 883, 924, 1115, 1151, 1165
XceI RCATGY 1 cut(s) 980
XmiI GTMKAC 1 cut(s) 874
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 2 cut(s) 1061, 1139
ZrmI AGTACT 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.